Miyakogusa Predicted Gene
- Lj0g3v0167179.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0167179.1 tr|G7LAK1|G7LAK1_MEDTR Tau class glutathione
S-transferase OS=Medicago truncatula GN=MTR_8g105170
PE,25.23,1e-18,PPR_2,Pentatricopeptide repeat; PPR_1,Pentatricopeptide
repeat; PPR_3,Pentatricopeptide repeat; HCP-,23057_g.1
(384 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 378 e-105
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 222 3e-58
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 1e-54
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 208 6e-54
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 208 6e-54
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 3e-53
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 201 9e-52
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 3e-51
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 199 3e-51
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 1e-50
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 3e-49
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 9e-49
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 1e-48
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 2e-48
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 3e-48
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 4e-48
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 188 5e-48
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 1e-47
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 186 2e-47
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 3e-47
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 4e-47
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 4e-47
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 6e-47
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 185 6e-47
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 184 1e-46
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 184 1e-46
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 1e-46
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 183 1e-46
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 2e-46
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 5e-46
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 1e-45
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 180 2e-45
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 2e-45
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 2e-45
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 2e-45
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 177 8e-45
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 177 8e-45
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 9e-45
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 1e-44
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 1e-44
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 176 2e-44
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 4e-44
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 6e-44
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 7e-44
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 9e-44
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 2e-43
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 2e-43
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 172 3e-43
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 4e-43
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 171 7e-43
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 7e-43
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 3e-42
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 169 4e-42
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 5e-42
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 168 7e-42
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 3e-41
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 4e-41
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 6e-41
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 7e-41
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 7e-41
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 2e-40
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 3e-40
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 4e-40
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 4e-40
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 161 7e-40
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 1e-39
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 2e-39
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 160 2e-39
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 159 2e-39
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 4e-39
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 158 5e-39
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 9e-39
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 157 1e-38
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 1e-38
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 157 2e-38
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 8e-38
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 154 1e-37
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 153 2e-37
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 2e-37
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 151 8e-37
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 1e-36
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 1e-36
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 4e-36
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 9e-36
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 146 3e-35
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 1e-34
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 4e-34
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 9e-34
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 9e-34
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 1e-33
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 2e-33
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 3e-33
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 139 4e-33
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 5e-33
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 138 5e-33
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 6e-33
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 138 6e-33
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 8e-33
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 9e-33
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 137 1e-32
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 137 2e-32
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 2e-32
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 4e-32
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 6e-32
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 6e-32
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 9e-32
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 132 4e-31
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 4e-31
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 6e-31
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 7e-31
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 7e-31
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 8e-31
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 9e-31
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 9e-31
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 130 1e-30
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 3e-30
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 9e-30
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 9e-30
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 9e-30
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 1e-29
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 127 2e-29
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 3e-29
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 4e-29
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 9e-29
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 124 1e-28
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 124 1e-28
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 4e-28
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 4e-28
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 8e-28
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 120 2e-27
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 4e-27
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 1e-26
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 117 1e-26
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 2e-26
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 4e-25
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 4e-25
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 5e-25
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 9e-25
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 9e-25
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 9e-25
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 4e-24
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 4e-24
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 108 4e-24
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 8e-24
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 9e-24
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 107 1e-23
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 2e-23
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 3e-23
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 4e-23
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 4e-23
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 4e-23
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 5e-23
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 1e-22
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 1e-22
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 4e-22
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 100 2e-21
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 99 4e-21
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 4e-21
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 6e-21
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 98 8e-21
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 98 8e-21
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 1e-20
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 2e-20
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 3e-20
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 96 6e-20
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 96 6e-20
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 7e-20
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 8e-20
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 95 1e-19
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 1e-19
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 94 1e-19
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 1e-19
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 94 2e-19
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 93 3e-19
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 93 3e-19
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 4e-19
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 7e-19
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 9e-19
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 92 9e-19
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 9e-19
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 91 1e-18
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 91 2e-18
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 90 3e-18
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 3e-18
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 90 3e-18
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 4e-18
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 89 4e-18
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 4e-18
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 4e-18
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 4e-18
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 4e-18
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 89 4e-18
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 5e-18
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 5e-18
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 89 6e-18
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 88 9e-18
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 88 1e-17
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 87 1e-17
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 87 2e-17
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 86 3e-17
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 86 5e-17
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 6e-17
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 8e-17
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 9e-17
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 9e-17
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 84 1e-16
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 84 2e-16
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 2e-16
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 3e-16
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 3e-16
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 3e-16
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 5e-16
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 6e-16
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 7e-16
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 7e-16
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 81 1e-15
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 2e-15
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 80 3e-15
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 3e-15
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 80 3e-15
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 79 4e-15
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 4e-15
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 79 5e-15
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 79 7e-15
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 79 7e-15
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 7e-15
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 8e-15
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 78 9e-15
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-14
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 77 2e-14
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 77 3e-14
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 3e-14
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 6e-14
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 6e-14
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-14
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-14
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 1e-13
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 74 2e-13
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 74 2e-13
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 73 3e-13
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 4e-13
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 6e-13
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 7e-13
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 1e-12
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 70 2e-12
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 9e-12
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 67 2e-11
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 67 2e-11
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 65 6e-11
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 64 2e-10
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 60 3e-09
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 60 3e-09
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 60 3e-09
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 58 1e-08
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 57 2e-08
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 56 3e-08
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 4e-08
AT3G04260.1 | Symbols: PTAC3 | plastid transcriptionally active ... 56 5e-08
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G01860.1 | Symbols: EMB975 | Tetratricopeptide repeat (TPR)-l... 53 3e-07
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT2G48000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT3G42630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 9e-06
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/390 (47%), Positives = 265/390 (67%), Gaps = 6/390 (1%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
+R +G+ PS S+ L + LV +KQF + VF +++ES RP YGKA++AAV L D
Sbjct: 135 LRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSD 194
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ KG EL M+ +R+ PSVF+YN+++ GLCK +R+ DA +LFDEML R L+P+ +TYNT
Sbjct: 195 VGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNT 254
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LIDGYCK G EK+F ++ RMKA + EPS+IT+N LL GL +G V DA VL EM+ G
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314
Query: 181 FLPGGFS-RIVFDDDSACSNGNGSL-----RANVAARIDERTYSALLNGFCRVGRIEKAK 234
F+P F+ I+FD S+ +L + +++ T S LLN C+ G+IEKA+
Sbjct: 315 FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAE 374
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
E+L + + G+VP+++ YN +++ YC +G + A E ME++G+KP ++ +N LI +F
Sbjct: 375 EILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRF 434
Query: 295 CETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNV 354
CE GE++ AE+ V KM KG++P++ETYN LI GYGR F KCF+IL+E+E G PNV
Sbjct: 435 CELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNV 494
Query: 355 ISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+SYG+LINCLCK KLL+A+IV DM RG
Sbjct: 495 VSYGTLINCLCKGSKLLEAQIVKRDMEDRG 524
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 197/381 (51%), Gaps = 30/381 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+ G +P + + LF+ +++ E L V+ V+SG++ + + + A
Sbjct: 310 MKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGK 369
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
++K E++G + + P+ +YN ++ G C+ + AR + M + + P+ + YN
Sbjct: 370 IEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNC 429
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI +C++GEME A +MK PSV TYN L+GG + ++L EME NG
Sbjct: 430 LIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNG 489
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
+P NV +Y L+N C+ ++ +A+ V +
Sbjct: 490 TMP-----------------------NVV------SYGTLINCLCKGSKLLEAQIVKRDM 520
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+ GV P YN+L++ C +G +E A + +++M ++G++ + VT+NTLI+ TG++
Sbjct: 521 EDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKL 580
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
+AE + ++ KG+ P + TYNSLI+GYG N +C + EE+++ G+KP + +Y L
Sbjct: 581 SEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLL 640
Query: 361 INCLCKDRKLLDAEIVLGDMA 381
I+ LC + E + G+M+
Sbjct: 641 IS-LCTKEGIELTERLFGEMS 660
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 190/405 (46%), Gaps = 45/405 (11%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+ D + PSV N L + L K+ +F +M+ + P +++Y ++ +
Sbjct: 205 MKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGN 264
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+K F++ M+ + + PS+ +N +L GL K V+DA + EM VP+ T++
Sbjct: 265 PEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSI 324
Query: 121 LIDGY-----------------------------------CKVGEMEKAFSLKARMKAPN 145
L DGY CK G++EKA + R A
Sbjct: 325 LFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKG 384
Query: 146 AEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVF--------DDDSAC 197
P+ + YN ++ G C G + AR + ME G P + + ++A
Sbjct: 385 LVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAE 444
Query: 198 SNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVN 257
N V+ ++ TY+ L+ G+ R +K ++L ++ +NG +P+ +SY L+N
Sbjct: 445 KEVNKMKLKGVSPSVE--TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLIN 502
Query: 258 AYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAP 317
C + +A ME+RG+ P +N LI+ C G+++ A R+ K+ML+KGI
Sbjct: 503 CLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIEL 562
Query: 318 TLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLIN 362
L TYN+LI+G + ++L EI +KG+KP+V +Y SLI+
Sbjct: 563 NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLIS 607
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 181/393 (46%), Gaps = 53/393 (13%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYG----------K 50
M+ GV PSV + N L +F+K + +M ++G P+VVSYG K
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 51 AVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRN 110
+EA ++ +D ME V P V +YN+++ G C +++DA + EML +
Sbjct: 510 LLEAQIVKRD----------MEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKG 559
Query: 111 LVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAR 170
+ N VTYNTLIDG G++ +A L + +P V TYN L+ G +G V
Sbjct: 560 IELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCI 619
Query: 171 EVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRI 230
+ EM+ +G P +TY L++ C I
Sbjct: 620 ALYEEMKRSGIKP-----------------------------TLKTYHLLIS-LCTKEGI 649
Query: 231 EKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTL 290
E + + E + P + YN +++ Y G +EKA +QM E+ + T+N+L
Sbjct: 650 ELTERLFG---EMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSL 706
Query: 291 INKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGM 350
I + G++ + + +M + + P +TYN ++ G+ + +++ + E+++KG
Sbjct: 707 ILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGF 766
Query: 351 KPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
+V L++ L ++ + +AEIV+ +M R
Sbjct: 767 LLDVCIGNELVSGLKEEWRSKEAEIVISEMNGR 799
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 202/384 (52%), Gaps = 29/384 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + V P+V + N L + + L +F M G P+VV+Y ++ L+
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D GF+L+ M + + P++ YN+V+ GLC+ R+K+ + EM R + VTYNT
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI GYCK G +A + A M PSVITY L+ +C +G +N A E L +M G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P +ERTY+ L++GF + G + +A VL ++
Sbjct: 376 LCP-----------------------------NERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+NG PS ++YN L+N +C G +E AI E M+E+GL P V+++T+++ FC + +V
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
D+A R ++M+EKGI P TY+SLI G+ + ++ EE+ + G+ P+ +Y +L
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTAL 526
Query: 361 INCLCKDRKLLDAEIVLGDMASRG 384
IN C + L A + +M +G
Sbjct: 527 INAYCMEGDLEKALQLHNEMVEKG 550
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 184/341 (53%), Gaps = 9/341 (2%)
Query: 52 VEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRR-VKDARKLFDEMLHRN 110
V++ L +DK ++ + P V YN VL + +R + A +F EML
Sbjct: 141 VKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQ 200
Query: 111 LVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAR 170
+ PN TYN LI G+C G ++ A +L +M+ P+V+TYN L+ G C +++D
Sbjct: 201 VSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGF 260
Query: 171 EVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAAR-------IDERTYSALLNG 223
++L M G P S V + C G + V +DE TY+ L+ G
Sbjct: 261 KLLRSMALKGLEPNLISYNVV-INGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Query: 224 FCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPS 283
+C+ G +A + A+++ +G+ PS I+Y L+++ C G + +A++ +QM RGL P+
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPN 379
Query: 284 YVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILE 343
T+ TL++ F + G +++A R +++M + G +P++ TYN+LING+ +LE
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439
Query: 344 EIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
++++KG+ P+V+SY ++++ C+ + +A V +M +G
Sbjct: 440 DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 197/408 (48%), Gaps = 27/408 (6%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G+ P++ S N + L + ++V V T+M G D V+Y ++ +
Sbjct: 266 MALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGN 325
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ + M + + PSV Y ++ +CK + A + D+M R L PN TY T
Sbjct: 326 FHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L+DG+ + G M +A+ + M PSV+TYN L+ G C +G++ DA VL +M+ G
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 181 FLP---------GGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIE 231
P GF R +D D A + + + D TYS+L+ GFC R +
Sbjct: 446 LSPDVVSYSTVLSGFCR-SYDVDEALRVKREMVEKGI--KPDTITYSSLIQGFCEQRRTK 502
Query: 232 KAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLI 291
+A ++ +++ G+ P + +Y L+NAYC EG +EKA+Q +M E+G+ P VT++ LI
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 292 NKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLING-----YGRISNFVKCF------- 339
N + +A+R + K+ + P+ TY++LI + + + +K F
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMT 622
Query: 340 ---EILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
++ E + K KP+ +Y +I+ C+ + A + +M G
Sbjct: 623 EADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 166/356 (46%), Gaps = 14/356 (3%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M +G PSV + N L + + E +AV DM E G+ PDVVSY + D
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D+ + M ++ + P Y+ ++ G C+ RR K+A L++EML L P+ TY
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 525
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI+ YC G++EKA L M P V+TY+ L+ GL R +A+ +L+++
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE 585
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
+P + ++ CSN I+ ++ +L+ GFC G + +A +V +
Sbjct: 586 SVPSDVTYHTLIEN--CSN------------IEFKSVVSLIKGFCMKGMMTEADQVFESM 631
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+ P +YNI+++ +C G + KA ++M + G VT L+ + G+V
Sbjct: 632 LGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKV 691
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVIS 356
++ + +L E L+ R N ++L E+ K G PN IS
Sbjct: 692 NELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 147/314 (46%), Gaps = 52/314 (16%)
Query: 118 YNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLG------------------- 158
++ ++ Y ++ ++KA S+ +A P V++YN +L
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 159 -----------------GLCSSGRVNDAREVLVEMEGNGFLPG---------GFSRIVFD 192
G C +G ++ A + +ME G LP G+ ++
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 193 DDSACSNGNGSLRANVAARIDER--TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQI 250
DD G LR+ ++ +Y+ ++NG CR GR+++ VL ++ G ++
Sbjct: 257 DD-----GFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 251 SYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKM 310
+YN L+ YC EG +A+ +M GL PS +T+ +LI+ C+ G +++A ++ +M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 311 LEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKL 370
+G+ P TY +L++G+ + + + +L E+ G P+V++Y +LIN C K+
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
Query: 371 LDAEIVLGDMASRG 384
DA VL DM +G
Sbjct: 432 EDAIAVLEDMKEKG 445
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/391 (31%), Positives = 197/391 (50%), Gaps = 12/391 (3%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K G P++ + N + +F+ + + M G+ DV +Y +
Sbjct: 259 MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNR 318
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ KG+ L+ M K + P+ YN ++ G +V A +L +EML L PN VT+N
Sbjct: 319 IAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNA 378
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LIDG+ G ++A + M+A PS ++Y LL GLC + + AR + M+ NG
Sbjct: 379 LIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG 438
Query: 181 FLPGGFSRIVFDD--DSACSNG---NGSLRANVAAR----IDERTYSALLNGFCRVGRIE 231
G RI + D C NG + N ++ D TYSAL+NGFC+VGR +
Sbjct: 439 VCVG---RITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 495
Query: 232 KAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLI 291
AKE++ ++ G+ P+ I Y+ L+ C G +++AI+ E M G + TFN L+
Sbjct: 496 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 555
Query: 292 NKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMK 351
C+ G+V +AE +++ M GI P +++ LINGYG +K F + +E+ K G
Sbjct: 556 TSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH 615
Query: 352 PNVISYGSLINCLCKDRKLLDAEIVLGDMAS 382
P +YGSL+ LCK L +AE L + +
Sbjct: 616 PTFFTYGSLLKGLCKGGHLREAEKFLKSLHA 646
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 192/393 (48%), Gaps = 12/393 (3%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
MRK + P+ + N L + + +M+ G+ P+ V++ ++ + +
Sbjct: 329 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 388
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ ++ ME + + PS Y ++L GLCK AR + M + +TY
Sbjct: 389 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 448
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+IDG CK G +++A L M +P ++TY+ L+ G C GR A+E++ + G
Sbjct: 449 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 508
Query: 181 FLPGG--FSRIVFDDDSACSNG--NGSLRANVAARI-----DERTYSALLNGFCRVGRIE 231
P G +S ++++ C G ++R A + D T++ L+ C+ G++
Sbjct: 509 LSPNGIIYSTLIYN---CCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA 565
Query: 232 KAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLI 291
+A+E + + +G++P+ +S++ L+N Y + G KA ++M + G P++ T+ +L+
Sbjct: 566 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 625
Query: 292 NKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMK 351
C+ G + +AE+++K + A YN+L+ + N K + E+ ++ +
Sbjct: 626 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 685
Query: 352 PNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
P+ +Y SLI+ LC+ K + A + + +RG
Sbjct: 686 PDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 718
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 184/389 (47%), Gaps = 12/389 (3%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G PSV + N + ++V S + V + +M++ I PDV ++ + +K
Sbjct: 193 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 252
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
LM MEK P++ YN VL CK R K A +L D M + + + TYN LI
Sbjct: 253 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHD 312
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
C+ + K + L M+ P+ +TYN L+ G + G+V A ++L EM G P
Sbjct: 313 LCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSP- 371
Query: 185 GFSRIVFDD--DSACSNGNGSLRANVAARID-------ERTYSALLNGFCRVGRIEKAKE 235
+ + F+ D S GN + ++ E +Y LL+G C+ + A+
Sbjct: 372 --NHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARG 429
Query: 236 VLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFC 295
++ NGV +I+Y +++ C G++++A+ +M + G+ P VT++ LIN FC
Sbjct: 430 FYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFC 489
Query: 296 ETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVI 355
+ G A+ V ++ G++P Y++LI R+ + I E + +G +
Sbjct: 490 KVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHF 549
Query: 356 SYGSLINCLCKDRKLLDAEIVLGDMASRG 384
++ L+ LCK K+ +AE + M S G
Sbjct: 550 TFNVLVTSLCKAGKVAEAEEFMRCMTSDG 578
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 158/316 (50%), Gaps = 9/316 (2%)
Query: 57 MLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTV 116
M++D + F LMG PSV+ N +LG + K EML R + P+
Sbjct: 178 MIQDSLEIFRLMGLYG---FNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVA 234
Query: 117 TYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEM 176
T+N LI+ C G EK+ L +M+ P+++TYN +L C GR A E+L M
Sbjct: 235 TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 294
Query: 177 EGNGFLPGGFSRIVFDDDSACSN----GNGSLRANVAARI--DERTYSALLNGFCRVGRI 230
+ G + + D SN G LR I +E TY+ L+NGF G++
Sbjct: 295 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 354
Query: 231 EKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTL 290
A ++L +++ G+ P+ +++N L++ + EG ++A++ ME +GL PS V++ L
Sbjct: 355 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVL 414
Query: 291 INKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGM 350
++ C+ E D A + +M G+ TY +I+G + + +L E+ K G+
Sbjct: 415 LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI 474
Query: 351 KPNVISYGSLINCLCK 366
P++++Y +LIN CK
Sbjct: 475 DPDIVTYSALINGFCK 490
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 182/396 (45%), Gaps = 19/396 (4%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M DG+LP+ S + L S + K +VF +M + G P +YG ++
Sbjct: 574 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 633
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L + + + + +YN +L +CK + A LF EM+ R+++P++ TY +
Sbjct: 634 LREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTS 693
Query: 121 LIDGYCKVGEMEKAFSLKARMKAP-NAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN 179
LI G C+ G+ A +A N P+ + Y C + G+ +G+ +M+
Sbjct: 694 LISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL 753
Query: 180 GFLPG---------GFSR---IVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRV 227
G P G+SR I +D GN + N+ TY+ LL+G+ +
Sbjct: 754 GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLT------TYNILLHGYSKR 807
Query: 228 GRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTF 287
+ + + ++ NG++P +++ + LV C +E ++ + RG++ TF
Sbjct: 808 KDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF 867
Query: 288 NTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEK 347
N LI+K C GE++ A VK M GI+ +T +++++ R F + +L E+ K
Sbjct: 868 NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK 927
Query: 348 KGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
+G+ P Y LIN LC+ + A +V +M +
Sbjct: 928 QGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH 963
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 139/286 (48%), Gaps = 29/286 (10%)
Query: 82 VYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARM 141
VY++++ + ++D+ ++F M P+ T N ++ K GE +S M
Sbjct: 165 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 224
Query: 142 KAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGN 201
P V T+N L+ LC+ G + ++ +ME +G+ P IV
Sbjct: 225 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAP----TIV----------- 269
Query: 202 GSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCH 261
TY+ +L+ +C+ GR + A E+L + GV +YN+L++ C
Sbjct: 270 --------------TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 315
Query: 262 EGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLET 321
+ K M +R + P+ VT+NTLIN F G+V A + + +ML G++P T
Sbjct: 316 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 375
Query: 322 YNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKD 367
+N+LI+G+ NF + ++ +E KG+ P+ +SYG L++ LCK+
Sbjct: 376 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKN 421
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 177/397 (44%), Gaps = 23/397 (5%)
Query: 3 KDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLD 62
+ VLP+ + + + Q++ + M G PD+V+ ++ + ++
Sbjct: 717 RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 776
Query: 63 KGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLI 122
K +L+ M + GP++ YN++L G K + V + L+ ++ ++P+ +T ++L+
Sbjct: 777 KTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLV 836
Query: 123 DGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFL 182
G C+ +E + E T+N L+ C++G +N A +++ M G
Sbjct: 837 LGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLG-- 894
Query: 183 PGGFSRIVFDDDS-----ACSNGNGSLR---------ANVAARIDERTYSALLNGFCRVG 228
I D D+ + N N + + + R Y L+NG CRVG
Sbjct: 895 ------ISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVG 948
Query: 229 RIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFN 288
I+ A V +++ + + P ++ + +V A G ++A M + L P+ +F
Sbjct: 949 DIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFT 1008
Query: 289 TLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKK 348
TL++ C+ G V +A M G+ L +YN LI G + FE+ EE++
Sbjct: 1009 TLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGD 1068
Query: 349 GMKPNVISYGSLI-NCLCKDRKLLDAEIVLGDMASRG 384
G N +Y +LI L ++ A+I+L D+ +RG
Sbjct: 1069 GFLANATTYKALIRGLLARETAFSGADIILKDLLARG 1105
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 113/249 (45%), Gaps = 29/249 (11%)
Query: 114 NTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVL 173
N Y+ LI Y + G ++ + + M PSV T N +LG + SG L
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221
Query: 174 VEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKA 233
EM P D T++ L+N C G EK+
Sbjct: 222 KEMLKRKICP-----------------------------DVATFNILINVLCAEGSFEKS 252
Query: 234 KEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINK 293
++ K+ ++G P+ ++YN +++ YC +G + AI+ + M+ +G+ T+N LI+
Sbjct: 253 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHD 312
Query: 294 FCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPN 353
C + + + ++ M ++ I P TYN+LING+ + ++L E+ G+ PN
Sbjct: 313 LCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN 372
Query: 354 VISYGSLIN 362
+++ +LI+
Sbjct: 373 HVTFNALID 381
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 115/250 (46%), Gaps = 17/250 (6%)
Query: 137 LKARMKAPNAEP-SVITYNCLLGGLCSSGRVND-AREVLVEMEGNGFLPGGFSRIVFDDD 194
LK +K P E ++ C+ + R+ D AR +L E+ L G S VF
Sbjct: 97 LKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELS----LMSGKSSFVF--- 149
Query: 195 SACSNGNGSLRANV-AARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYN 253
G+L + Y L+ + R G I+ + E+ + G PS + N
Sbjct: 150 -------GALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCN 202
Query: 254 ILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK 313
++ + G ++M +R + P TFN LIN C G +++ ++KM +
Sbjct: 203 AILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKS 262
Query: 314 GIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDA 373
G APT+ TYN++++ Y + F E+L+ ++ KG+ +V +Y LI+ LC+ ++
Sbjct: 263 GYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKG 322
Query: 374 EIVLGDMASR 383
++L DM R
Sbjct: 323 YLLLRDMRKR 332
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 72/133 (54%)
Query: 252 YNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKML 311
Y+IL+ Y EG ++ +++ M G PS T N ++ ++GE ++K+ML
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 225
Query: 312 EKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLL 371
++ I P + T+N LIN +F K +++++EK G P +++Y ++++ CK +
Sbjct: 226 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 285
Query: 372 DAEIVLGDMASRG 384
A +L M S+G
Sbjct: 286 AAIELLDHMKSKG 298
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 77/183 (42%), Gaps = 1/183 (0%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K G+ P R L L + V +M+ I P V+ V A
Sbjct: 925 MSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGK 984
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
D+ L+ M K ++ P++ + ++ CK V +A +L M + L + V+YN
Sbjct: 985 ADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNV 1044
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCS-SGRVNDAREVLVEMEGN 179
LI G C G+M AF L MK + TY L+ GL + + A +L ++
Sbjct: 1045 LITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLAR 1104
Query: 180 GFL 182
GF+
Sbjct: 1105 GFI 1107
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 208 bits (529), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 198/394 (50%), Gaps = 14/394 (3%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M++ G+ P+ + L + + F++M+ GI PD V Y ++ D
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ + M + P V Y ++ G C++ + +A KLF EM + L P++VT+
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI+GYCK G M+ AF + M P+V+TY L+ GLC G ++ A E+L EM G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 181 FLPGGFS--RIVFDDDSACSNGN--------GSLRANVAARIDERTYSALLNGFCRVGRI 230
P F+ IV + C +GN G A D TY+ L++ +C+ G +
Sbjct: 487 LQPNIFTYNSIV---NGLCKSGNIEEAVKLVGEFEA-AGLNADTVTYTTLMDAYCKSGEM 542
Query: 231 EKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTL 290
+KA+E+L +++ G+ P+ +++N+L+N +C G +E + M +G+ P+ TFN+L
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 291 INKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGM 350
+ ++C + A K M +G+ P +TY +L+ G+ + N + + + +E++ KG
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 351 KPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+V +Y LI K +K L+A V M G
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 171/311 (54%), Gaps = 12/311 (3%)
Query: 83 YNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMK 142
YN+V+ +C++ R+K+A L M + P+ ++Y+T+++GYC+ GE++K + L MK
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 143 APNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDD--DSACSNG 200
+P+ Y ++G LC ++ +A E EM G LP +V+ D C G
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP---DTVVYTTLIDGFCKRG 365
Query: 201 NGSLRANVAARIDER-------TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYN 253
+ + + R TY+A+++GFC++G + +A ++ ++ G+ P +++
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 254 ILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK 313
L+N YC G+++ A + M + G P+ VT+ TLI+ C+ G++D A + +M +
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 314 GIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDA 373
G+ P + TYNS++NG + N + +++ E E G+ + ++Y +L++ CK ++ A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 374 EIVLGDMASRG 384
+ +L +M +G
Sbjct: 546 QEILKEMLGKG 556
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 1/173 (0%)
Query: 213 DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGY-VEKAIQT 271
D R + G + +A+ V K++ G+V S S N+ + + Y AI
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 233
Query: 272 AEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGR 331
+ E G+ + ++N +I+ C+ G + +A + M KG P + +Y++++NGY R
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 332 ISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
K ++++E +++KG+KPN YGS+I LC+ KL +AE +M +G
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 77/148 (52%)
Query: 236 VLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFC 295
V + E GV + SYNI+++ C G +++A ME +G P ++++T++N +C
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 296 ETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVI 355
GE+D+ + ++ M KG+ P Y S+I RI + E E+ ++G+ P+ +
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 356 SYGSLINCLCKDRKLLDAEIVLGDMASR 383
Y +LI+ CK + A +M SR
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSR 380
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 57/123 (46%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G+ P+ + N L + + A++ DM G+ PD +Y V+ ++
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ + + L M+ + SV Y++++ G K ++ +AR++FD+M L + ++
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDF 706
Query: 121 LID 123
D
Sbjct: 707 FSD 709
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 208 bits (529), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 198/394 (50%), Gaps = 14/394 (3%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M++ G+ P+ + L + + F++M+ GI PD V Y ++ D
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ + M + P V Y ++ G C++ + +A KLF EM + L P++VT+
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI+GYCK G M+ AF + M P+V+TY L+ GLC G ++ A E+L EM G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 181 FLPGGFS--RIVFDDDSACSNGN--------GSLRANVAARIDERTYSALLNGFCRVGRI 230
P F+ IV + C +GN G A D TY+ L++ +C+ G +
Sbjct: 487 LQPNIFTYNSIV---NGLCKSGNIEEAVKLVGEFEA-AGLNADTVTYTTLMDAYCKSGEM 542
Query: 231 EKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTL 290
+KA+E+L +++ G+ P+ +++N+L+N +C G +E + M +G+ P+ TFN+L
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 291 INKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGM 350
+ ++C + A K M +G+ P +TY +L+ G+ + N + + + +E++ KG
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 351 KPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+V +Y LI K +K L+A V M G
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 171/311 (54%), Gaps = 12/311 (3%)
Query: 83 YNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMK 142
YN+V+ +C++ R+K+A L M + P+ ++Y+T+++GYC+ GE++K + L MK
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 143 APNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDD--DSACSNG 200
+P+ Y ++G LC ++ +A E EM G LP +V+ D C G
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP---DTVVYTTLIDGFCKRG 365
Query: 201 NGSLRANVAARIDER-------TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYN 253
+ + + R TY+A+++GFC++G + +A ++ ++ G+ P +++
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 254 ILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK 313
L+N YC G+++ A + M + G P+ VT+ TLI+ C+ G++D A + +M +
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 314 GIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDA 373
G+ P + TYNS++NG + N + +++ E E G+ + ++Y +L++ CK ++ A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 374 EIVLGDMASRG 384
+ +L +M +G
Sbjct: 546 QEILKEMLGKG 556
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 1/173 (0%)
Query: 213 DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGY-VEKAIQT 271
D R + G + +A+ V K++ G+V S S N+ + + Y AI
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 233
Query: 272 AEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGR 331
+ E G+ + ++N +I+ C+ G + +A + M KG P + +Y++++NGY R
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 332 ISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
K ++++E +++KG+KPN YGS+I LC+ KL +AE +M +G
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 77/148 (52%)
Query: 236 VLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFC 295
V + E GV + SYNI+++ C G +++A ME +G P ++++T++N +C
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 296 ETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVI 355
GE+D+ + ++ M KG+ P Y S+I RI + E E+ ++G+ P+ +
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 356 SYGSLINCLCKDRKLLDAEIVLGDMASR 383
Y +LI+ CK + A +M SR
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSR 380
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 57/123 (46%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G+ P+ + N L + + A++ DM G+ PD +Y V+ ++
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ + + L M+ + SV Y++++ G K ++ +AR++FD+M L + ++
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDF 706
Query: 121 LID 123
D
Sbjct: 707 FSD 709
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 206/393 (52%), Gaps = 10/393 (2%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G P V + N + L ++E+ VF +M+ SG+ PD +Y + A D
Sbjct: 296 MPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD 355
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ + ++ M V P + ++ ++ + + A F+ + L+P+ V Y
Sbjct: 356 VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 415
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI GYC+ G + A +L+ M V+TYN +L GLC + +A ++ EM
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDER-------TYSALLNGFCRVGRIEKA 233
P ++ + D C GN + ++ E+ TY+ LL+GF +VG I+ A
Sbjct: 476 LFPDSYTLTILID-GHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTA 534
Query: 234 KEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINK 293
KE+ A +V ++P+ ISY+ILVNA C +G++ +A + ++M + +KP+ + N++I
Sbjct: 535 KEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKG 594
Query: 294 FCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKK--GMK 351
+C +G E +++KM+ +G P +YN+LI G+ R N K F +++++E++ G+
Sbjct: 595 YCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLV 654
Query: 352 PNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
P+V +Y S+++ C+ ++ +AE+VL M RG
Sbjct: 655 PDVFTYNSILHGFCRQNQMKEAEVVLRKMIERG 687
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 180/362 (49%), Gaps = 10/362 (2%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
MR V+P + + + S +K L F + E+G+ PD V Y ++
Sbjct: 366 MRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGM 425
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ L M ++ V YN +L GLCK + + +A KLF+EM R L P++ T
Sbjct: 426 ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LIDG+CK+G ++ A L +MK V+TYN LL G G ++ A+E+ +M
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTY-------SALLNGFCRVGRIEKA 233
LP S + ++ CS G+ + V + + ++++ G+CR G
Sbjct: 546 ILPTPISYSIL-VNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDG 604
Query: 234 KEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEER--GLKPSYVTFNTLI 291
+ L K++ G VP ISYN L+ + E + KA ++MEE GL P T+N+++
Sbjct: 605 ESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSIL 664
Query: 292 NKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMK 351
+ FC ++ +AE ++KM+E+G+ P TY +ING+ N + F I +E+ ++G
Sbjct: 665 HGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFS 724
Query: 352 PN 353
P+
Sbjct: 725 PD 726
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 197/394 (50%), Gaps = 14/394 (3%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
+ + GV +V ++N + L + EKV + + E G+ PD+V+Y + A
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+++ FELM M + P V+ YN V+ GLCK + + A+++F EML L P++ TY +
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 121 LIDGYCKVG---EMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEME 177
L+ CK G E EK FS M++ + P ++ ++ ++ SG ++ A ++
Sbjct: 346 LLMEACKKGDVVETEKVFS---DMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 402
Query: 178 GNGFLPGGFSRIVFDDDSACSNGNGSLRANV-------AARIDERTYSALLNGFCRVGRI 230
G +P + C G S+ N+ +D TY+ +L+G C+ +
Sbjct: 403 EAGLIPDNVIYTIL-IQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 231 EKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTL 290
+A ++ ++ E + P + IL++ +C G ++ A++ ++M+E+ ++ VT+NTL
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521
Query: 291 INKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGM 350
++ F + G++D A+ M+ K I PT +Y+ L+N + + F + +E+ K +
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Query: 351 KPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
KP V+ S+I C+ D E L M S G
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 187/377 (49%), Gaps = 12/377 (3%)
Query: 16 LFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKER 75
L T V +++ + FT + G + + + + V + ++ + + + +
Sbjct: 171 LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSG 230
Query: 76 VGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAF 135
VG +V+ N+++ LCK +++ ++ + + P+ VTYNTLI Y G ME+AF
Sbjct: 231 VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAF 290
Query: 136 SLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGG--FSRIVFDD 193
L M P V TYN ++ GLC G+ A+EV EM +G P + ++ +
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME- 349
Query: 194 DSACSNGNGSLRANVAARIDERT-------YSALLNGFCRVGRIEKAKEVLAKLVENGVV 246
AC G+ V + + R +S++++ F R G ++KA + E G++
Sbjct: 350 --ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
Query: 247 PSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERW 306
P + Y IL+ YC +G + A+ +M ++G VT+NT+++ C+ + +A++
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 307 VKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCK 366
+M E+ + P T LI+G+ ++ N E+ +++++K ++ +V++Y +L++ K
Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK 527
Query: 367 DRKLLDAEIVLGDMASR 383
+ A+ + DM S+
Sbjct: 528 VGDIDTAKEIWADMVSK 544
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 180/391 (46%), Gaps = 10/391 (2%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
+R G S+ + N L +LV E V+ ++ SG+ +V + V A
Sbjct: 191 LRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGK 250
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
++K + ++++ V P + YN ++ +++A +L + M + P TYNT
Sbjct: 251 MEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNT 310
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+I+G CK G+ E+A + A M P TY LL C G V + +V +M
Sbjct: 311 VINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRD 370
Query: 181 FLPG--GFSRIVF------DDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEK 232
+P FS ++ + D A N A + D Y+ L+ G+CR G I
Sbjct: 371 VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIP--DNVIYTILIQGYCRKGMISV 428
Query: 233 AKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLIN 292
A + ++++ G ++YN +++ C + +A + +M ER L P T LI+
Sbjct: 429 AMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILID 488
Query: 293 KFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKP 352
C+ G + A +KM EK I + TYN+L++G+G++ + EI ++ K + P
Sbjct: 489 GHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILP 548
Query: 353 NVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
ISY L+N LC L +A V +M S+
Sbjct: 549 TPISYSILVNALCSKGHLAEAFRVWDEMISK 579
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 147/313 (46%), Gaps = 14/313 (4%)
Query: 82 VYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARM 141
V++L++ + R++++A + F + + + N LI ++G +E A+ + +
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 142 KAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGN 201
+V T N ++ LC G++ L +++ G P IV + + +
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPD----IVTYNTLISAYSS 282
Query: 202 GSLRANVAARIDER----------TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQIS 251
L ++ TY+ ++NG C+ G+ E+AKEV A+++ +G+ P +
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 342
Query: 252 YNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKML 311
Y L+ C +G V + + M R + P V F+++++ F +G +D+A + +
Sbjct: 343 YRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 402
Query: 312 EKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLL 371
E G+ P Y LI GY R + E+ ++G +V++Y ++++ LCK + L
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 462
Query: 372 DAEIVLGDMASRG 384
+A+ + +M R
Sbjct: 463 EADKLFNEMTERA 475
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 133/267 (49%), Gaps = 31/267 (11%)
Query: 144 PNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSR--IVFDDDSACSN-- 199
PN + + ++ + ++ L SGR++DA+ L+ M G SR IV DS SN
Sbjct: 107 PNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRM----IRRSGVSRLEIVNSLDSTFSNCG 162
Query: 200 GNGS-----LRANVAARIDERTY------------------SALLNGFCRVGRIEKAKEV 236
N S +R V AR + +AL+ R+G +E A V
Sbjct: 163 SNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGV 222
Query: 237 LAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCE 296
++ +GV + + NI+VNA C +G +EK Q++E+G+ P VT+NTLI+ +
Sbjct: 223 YQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSS 282
Query: 297 TGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVIS 356
G +++A + M KG +P + TYN++ING + + + E+ E+ + G+ P+ +
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 342
Query: 357 YGSLINCLCKDRKLLDAEIVLGDMASR 383
Y SL+ CK +++ E V DM SR
Sbjct: 343 YRSLLMEACKKGDVVETEKVFSDMRSR 369
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 201 bits (510), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 120/380 (31%), Positives = 198/380 (52%), Gaps = 29/380 (7%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G P+V L + + EK +F +M + G+ + +Y + +G
Sbjct: 193 GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQG 252
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
FE+ M+++ V P+++ YN V+ LCK R KDA ++FDEM R + N VTYNTLI G
Sbjct: 253 FEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGG 312
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
C+ ++ +A + +MK+ P++ITYN L+ G C G++ A + +++ G P
Sbjct: 313 LCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
TY+ L++GFCR G A +++ ++ E G
Sbjct: 373 LV-----------------------------TYNILVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
+ PS+++Y IL++ + +EKAIQ MEE GL P T++ LI+ FC G++++A
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS 463
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
R K M+EK P YN++I GY + + + ++L+E+E+K + PNV SY +I L
Sbjct: 464 RLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVL 523
Query: 365 CKDRKLLDAEIVLGDMASRG 384
CK+RK +AE ++ M G
Sbjct: 524 CKERKSKEAERLVEKMIDSG 543
Score = 177 bits (450), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 178/331 (53%), Gaps = 20/331 (6%)
Query: 1 MRKDGVLPSVRS----VNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAV 56
M K G++ + R+ +N LF+ V + FE ++ M E G+ P++ +Y +
Sbjct: 224 MGKLGLVANERTYTVLINGLFKNGVKKQGFE----MYEKMQEDGVFPNLYTYNCVMNQLC 279
Query: 57 MLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTV 116
F++ M + V ++ YN ++GGLC+ ++ +A K+ D+M + PN +
Sbjct: 280 KDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLI 339
Query: 117 TYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEM 176
TYNTLIDG+C VG++ KA SL +K+ PS++TYN L+ G C G + A +++ EM
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399
Query: 177 EGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARI---------DERTYSALLNGFCRV 227
E G P + + D A S+ ++ + R+ D TYS L++GFC
Sbjct: 400 EERGIKPSKVTYTILIDTFARSD---NMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIK 456
Query: 228 GRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTF 287
G++ +A + +VE P+++ YN ++ YC EG +A++ ++MEE+ L P+ ++
Sbjct: 457 GQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASY 516
Query: 288 NTLINKFCETGEVDQAERWVKKMLEKGIAPT 318
+I C+ + +AER V+KM++ GI P+
Sbjct: 517 RYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 156/347 (44%), Gaps = 63/347 (18%)
Query: 72 EKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYN------------ 119
E E +Y +++ + + + + F+EM+ VP + +N
Sbjct: 86 ESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSF 145
Query: 120 ----------------------TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLL 157
LI G C+ GE+EK+F L + P+V+ Y L+
Sbjct: 146 NQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLI 205
Query: 158 GGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTY 217
G C G + A+++ EM G L AN ERTY
Sbjct: 206 DGCCKKGEIEKAKDLFFEM-----------------------GKLGLVAN------ERTY 236
Query: 218 SALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEE 277
+ L+NG + G ++ E+ K+ E+GV P+ +YN ++N C +G + A Q ++M E
Sbjct: 237 TVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRE 296
Query: 278 RGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVK 337
RG+ + VT+NTLI C ++++A + V +M GI P L TYN+LI+G+ + K
Sbjct: 297 RGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGK 356
Query: 338 CFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ +++ +G+ P++++Y L++ C+ A ++ +M RG
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 199 bits (505), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 202/386 (52%), Gaps = 12/386 (3%)
Query: 7 LPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFE 66
LP+V NRLF + +KQ+E VLA+ M GI + + + + L F
Sbjct: 85 LPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFS 144
Query: 67 LMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYC 126
MG + K P ++N +L GLC RV +A +L D M+ P +T NTL++G C
Sbjct: 145 TMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLC 204
Query: 127 KVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGG- 185
G++ A L RM +P+ +TY +L +C SG+ A E+L +ME
Sbjct: 205 LNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264
Query: 186 -FSRIVFDDDSACSNGNGSLRANV-------AARIDERTYSALLNGFCRVGRIEKAKEVL 237
+S I+ D C +G+ N+ + D TY+ L+ GFC GR + ++L
Sbjct: 265 KYSIII---DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLL 321
Query: 238 AKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCET 297
+++ + P+ +++++L++++ EG + +A Q ++M +RG+ P+ +T+N+LI+ FC+
Sbjct: 322 RDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKE 381
Query: 298 GEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISY 357
+++A + V M+ KG P + T+N LINGY + + E+ E+ +G+ N ++Y
Sbjct: 382 NRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTY 441
Query: 358 GSLINCLCKDRKLLDAEIVLGDMASR 383
+L+ C+ KL A+ + +M SR
Sbjct: 442 NTLVQGFCQSGKLEVAKKLFQEMVSR 467
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 189/371 (50%), Gaps = 30/371 (8%)
Query: 14 NRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEK 73
++L LVG K + V +F DM++S P V+ + + A K + L ME
Sbjct: 58 DKLSSGLVGIKADDAV-DLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMES 116
Query: 74 ERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEK 133
+ + S++ ++++ C+ R++ A +++ P+TV +NTL++G C + +
Sbjct: 117 KGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSE 176
Query: 134 AFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDD 193
A L RM +P++IT N L+ GLC +G+V+DA ++ M GF P
Sbjct: 177 ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQP---------- 226
Query: 194 DSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYN 253
+E TY +LN C+ G+ A E+L K+ E + + Y+
Sbjct: 227 -------------------NEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 254 ILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK 313
I+++ C +G ++ A +ME +G K +T+NTLI FC G D + ++ M+++
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 314 GIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDA 373
I+P + T++ LI+ + + + ++L+E+ ++G+ PN I+Y SLI+ CK+ +L +A
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 374 EIVLGDMASRG 384
++ M S+G
Sbjct: 388 IQMVDLMISKG 398
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 187/380 (49%), Gaps = 29/380 (7%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G P++ ++N L L + + + + MVE+G +P+ V+YG +
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
EL+ ME+ + Y++++ GLCK + +A LF+EM + + +TYNTLI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
+C G + L M P+V+T++ L+ G++ +A ++L EM G P
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
TY++L++GFC+ R+E+A +++ ++ G
Sbjct: 368 TI-----------------------------TYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
P +++NIL+N YC ++ ++ +M RG+ + VT+NTL+ FC++G+++ A+
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
+ ++M+ + + P + +Y L++G K EI +IEK M+ ++ Y +I+ +
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGM 518
Query: 365 CKDRKLLDAEIVLGDMASRG 384
C K+ DA + + +G
Sbjct: 519 CNASKVDDAWDLFCSLPLKG 538
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 179/369 (48%), Gaps = 29/369 (7%)
Query: 16 LFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKER 75
+ + L + +F +M G + D+++Y + D G +L+ M K +
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 76 VGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAF 135
+ P+V +++++ K ++++A +L EM+ R + PNT+TYN+LIDG+CK +E+A
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 136 SLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDS 195
+ M + +P ++T+N L+ G C + R++D E+ EM
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM------------------- 429
Query: 196 ACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNIL 255
SLR +A + TY+ L+ GFC+ G++E AK++ ++V V P +SY IL
Sbjct: 430 -------SLRGVIANTV---TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKIL 479
Query: 256 VNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGI 315
++ C G +EKA++ ++E+ ++ + +I+ C +VD A + KG+
Sbjct: 480 LDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGV 539
Query: 316 APTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEI 375
YN +I+ R + K + ++ ++G P+ ++Y LI D A
Sbjct: 540 KLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAE 599
Query: 376 VLGDMASRG 384
++ +M S G
Sbjct: 600 LIEEMKSSG 608
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 174/384 (45%), Gaps = 29/384 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G P+ + + + S Q + + M E I+ D V Y ++
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
LD F L ME + + YN ++GG C R D KL +M+ R + PN VT++
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LID + K G++ +A L M P+ ITYN L+ G C R+ +A +++ M G
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P D T++ L+NG+C+ RI+ E+ ++
Sbjct: 399 CDP-----------------------------DIMTFNILINGYCKANRIDDGLELFREM 429
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
GV+ + ++YN LV +C G +E A + ++M R ++P V++ L++ C+ GE+
Sbjct: 430 SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGEL 489
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
++A K+ + + + Y +I+G S +++ + KG+K + +Y +
Sbjct: 490 EKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIM 549
Query: 361 INCLCKDRKLLDAEIVLGDMASRG 384
I+ LC+ L A+I+ M G
Sbjct: 550 ISELCRKDSLSKADILFRKMTEEG 573
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 155/309 (50%), Gaps = 7/309 (2%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K + P+V + + L ++ V + + + +M++ GI P+ ++Y ++
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L++ +++ M + P + +N+++ G CK R+ D +LF EM R ++ NTVTYNT
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L+ G+C+ G++E A L M + P +++Y LL GLC +G + A E+ ++E +
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 181 F-LPGGFSRIVFDDDSACSNGNGSLRANVA-----ARIDERTYSALLNGFCRVGRIEKAK 234
L G I+ S + + + ++D R Y+ +++ CR + KA
Sbjct: 504 MELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKAD 563
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
+ K+ E G P +++YNIL+ A+ + A + E+M+ G T +IN
Sbjct: 564 ILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
Query: 295 CETGEVDQA 303
+GE+D++
Sbjct: 624 -SSGELDKS 631
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 199 bits (505), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 199/389 (51%), Gaps = 15/389 (3%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G +P V + N + + + L+V M + PDVV+Y + + L +
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQA 223
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
E++ M + P V Y +++ C+ V A KL DEM R P+ VTYN L++G
Sbjct: 224 MEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNG 283
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
CK G +++A M + +P+VIT+N +L +CS+GR DA ++L +M GF P
Sbjct: 284 ICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP- 342
Query: 185 GFSRIVFDD--DSACSNGNGSLRANVAARIDER-------TYSALLNGFCRVGRIEKAKE 235
S + F+ + C G ++ ++ + +Y+ LL+GFC+ ++++A E
Sbjct: 343 --SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 236 VLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFC 295
L ++V G P ++YN ++ A C +G VE A++ Q+ +G P +T+NT+I+
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460
Query: 296 ETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVI 355
+ G+ +A + + +M K + P TY+SL+ G R + + E E+ G++PN +
Sbjct: 461 KAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAV 520
Query: 356 SYGSLINCLCKDRKLLDAEIVLGDMASRG 384
++ S++ LCK R+ A L M +RG
Sbjct: 521 TFNSIMLGLCKSRQTDRAIDFLVFMINRG 549
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 173/331 (52%), Gaps = 9/331 (2%)
Query: 60 DLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYN 119
+L++GF+ + M P + ++ G C++ + + A K+ + + VP+ +TYN
Sbjct: 117 ELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYN 176
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN 179
+I GYCK GE+ A S+ RM + P V+TYN +L LC SG++ A EVL M
Sbjct: 177 VMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233
Query: 180 GFLPGGFSRIVFDDDSACSNGNGSLRA------NVAARIDERTYSALLNGFCRVGRIEKA 233
P + + + + +G G + D TY+ L+NG C+ GR+++A
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293
Query: 234 KEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINK 293
+ L + +G P+ I++NI++ + C G A + M +G PS VTFN LIN
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINF 353
Query: 294 FCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPN 353
C G + +A ++KM + G P +YN L++G+ + + E LE + +G P+
Sbjct: 354 LCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD 413
Query: 354 VISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+++Y +++ LCKD K+ DA +L ++S+G
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 187/369 (50%), Gaps = 35/369 (9%)
Query: 15 RLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKE 74
R F L +++ K+L + SG PDV++Y + +++ ++ ++
Sbjct: 145 RGFCRLGKTRKAAKILEILEG---SGAVPDVITYNVMISGYCKAGEINNALSVL---DRM 198
Query: 75 RVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKA 134
V P V YN +L LC ++K A ++ D ML R+ P+ +TY LI+ C+ + A
Sbjct: 199 SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA 258
Query: 135 FSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDD 194
L M+ P V+TYN L+ G+C GR+++A + L +M +G P
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQP----------- 307
Query: 195 SACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNI 254
NV T++ +L C GR A+++LA ++ G PS +++NI
Sbjct: 308 ------------NVI------THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 255 LVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKG 314
L+N C +G + +AI E+M + G +P+ +++N L++ FC+ ++D+A ++++M+ +G
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 315 IAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAE 374
P + TYN+++ + EIL ++ KG P +I+Y ++I+ L K K A
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 375 IVLGDMASR 383
+L +M ++
Sbjct: 470 KLLDEMRAK 478
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 167/350 (47%), Gaps = 29/350 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
MR G P V + N L + + ++ + DM SG +P+V+++ + +
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+L+ M ++ PSV +N+++ LC+ + A + ++M PN+++YN
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L+ G+CK +M++A RM + P ++TYN +L LC G+V DA E+L ++ G
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P TY+ +++G + G+ KA ++L ++
Sbjct: 445 CSPVLI-----------------------------TYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+ P I+Y+ LV EG V++AI+ + E G++P+ VTFN+++ C++ +
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQT 535
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGM 350
D+A ++ M+ +G P +Y LI G + E+L E+ KG+
Sbjct: 536 DRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 193/386 (50%), Gaps = 10/386 (2%)
Query: 7 LPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFE 66
LPS+ +RL + K+++ V+ ++ M GI ++ + + L
Sbjct: 78 LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137
Query: 67 LMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYC 126
+G M K PS+ + +L G C+ RV DA +FD+M+ PN V YNT+IDG C
Sbjct: 138 FLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
Query: 127 KVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGF 186
K +++ A L RM+ P V+TYN L+ GLCSSGR +DA ++ M P F
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257
Query: 187 SRIVFDDDSAC------SNGNGSLRANVAARIDER--TYSALLNGFCRVGRIEKAKEVLA 238
+ D AC S + +D TYS L+ G C R+++A+E+
Sbjct: 258 TFNALID--ACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFG 315
Query: 239 KLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETG 298
+V G P ++Y+IL+N YC VE ++ +M +RG+ + VT+ LI +C G
Sbjct: 316 FMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAG 375
Query: 299 EVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYG 358
+++ AE ++M+ G+ P + TYN L++G K IL +++K GM ++++Y
Sbjct: 376 KLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYN 435
Query: 359 SLINCLCKDRKLLDAEIVLGDMASRG 384
+I +CK ++ DA + + +G
Sbjct: 436 IIIRGMCKAGEVADAWDIYCSLNCQG 461
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 173/361 (47%), Gaps = 29/361 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K G PS+ + L + L +F MV G +P+VV Y ++ K
Sbjct: 142 MIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQ 201
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D +L+ MEK+ +GP V YN ++ GLC R DA ++ M R + P+ T+N
Sbjct: 202 VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNA 261
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LID K G + +A M + +P ++TY+ L+ GLC R+++A E+ M G
Sbjct: 262 LIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P D TYS L+NG+C+ ++E ++ ++
Sbjct: 322 CFP-----------------------------DVVTYSILINGYCKSKKVEHGMKLFCEM 352
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+ GVV + ++Y IL+ YC G + A + +M G+ P+ +T+N L++ C+ G++
Sbjct: 353 SQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKI 412
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
++A + M + G+ + TYN +I G + ++I + +G+ P++ +Y ++
Sbjct: 413 EKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTM 472
Query: 361 I 361
+
Sbjct: 473 M 473
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 167/346 (48%), Gaps = 12/346 (3%)
Query: 48 YGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEML 107
Y + + + LD +L M + R PS+ ++ +L + K+++ L+++M
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 108 HRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVN 167
+ N T N L++ +C+ ++ A S +M EPS++T+ LL G C RV
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 168 DAREVLVEMEGNGFLPGGFSRIVFDD--DSACSNGNGSLRANVAARI-------DERTYS 218
DA + +M G G+ P + ++++ D C + ++ R+ D TY+
Sbjct: 169 DALYMFDQMVGMGYKP---NVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225
Query: 219 ALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEER 278
+L++G C GR A +++ + + + P ++N L++A EG V +A + E+M R
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR 285
Query: 279 GLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKC 338
L P VT++ LI C +D+AE M+ KG P + TY+ LINGY +
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345
Query: 339 FEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
++ E+ ++G+ N ++Y LI C+ KL AE + M G
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG 391
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 185/333 (55%), Gaps = 23/333 (6%)
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
LD GF L +V+V+N+++ CK + DA+K+FDE+ R+L P V++NT
Sbjct: 232 LDAGFPL-----------NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNT 280
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI+GYCKVG +++ F LK +M+ P V TY+ L+ LC +++ A + EM G
Sbjct: 281 LINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRG 340
Query: 181 FLPGG--FSRIVFDDDSACSNGNGSLRANVAARI-------DERTYSALLNGFCRVGRIE 231
+P F+ ++ NG L ++ D Y+ L+NGFC+ G +
Sbjct: 341 LIPNDVIFTTLI---HGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLV 397
Query: 232 KAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLI 291
A+ ++ ++ G+ P +I+Y L++ +C G VE A++ ++M++ G++ V F+ L+
Sbjct: 398 AARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALV 457
Query: 292 NKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMK 351
C+ G V AER +++ML GI P TY +++ + + + F++L+E++ G
Sbjct: 458 CGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV 517
Query: 352 PNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
P+V++Y L+N LCK ++ +A+++L M + G
Sbjct: 518 PSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIG 550
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 181/345 (52%), Gaps = 11/345 (3%)
Query: 32 VFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLC 91
VF ++ + ++P VVS+ + + +LD+GF L MEK R P VF Y+ ++ LC
Sbjct: 262 VFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALC 321
Query: 92 KVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVI 151
K ++ A LFDEM R L+PN V + TLI G+ + GE++ +M + +P ++
Sbjct: 322 KENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIV 381
Query: 152 TYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAAR 211
YN L+ G C +G + AR ++ M G P + D C G+ +
Sbjct: 382 LYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTL-IDGFCRGGDVETALEIRKE 440
Query: 212 IDER-------TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGY 264
+D+ +SAL+ G C+ GR+ A+ L +++ G+ P ++Y ++++A+C +G
Sbjct: 441 MDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGD 500
Query: 265 VEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNS 324
+ + ++M+ G PS VT+N L+N C+ G++ A+ + ML G+ P TYN+
Sbjct: 501 AQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNT 560
Query: 325 LINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRK 369
L+ G+ R +N K + EI G+ ++ SY S++N L + K
Sbjct: 561 LLEGHHRHANSSKRYIQKPEI---GIVADLASYKSIVNELDRASK 602
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 159/333 (47%), Gaps = 32/333 (9%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K P V + + L L + + +F +M + G+ P+ V + + +
Sbjct: 301 MEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGE 360
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D E M + + P + +YN ++ G CK + AR + D M+ R L P+ +TY T
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTT 420
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LIDG+C+ G++E A ++ M E + ++ L+ G+C GRV DA L EM
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREM---- 476
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
LRA + + D+ TY+ +++ FC+ G + ++L ++
Sbjct: 477 -----------------------LRAGI--KPDDVTYTMMMDAFCKKGDAQTGFKLLKEM 511
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+G VPS ++YN+L+N C G ++ A + M G+ P +T+NTL+
Sbjct: 512 QSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG--HHRHA 569
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRIS 333
+ ++R+++K E GI L +Y S++N R S
Sbjct: 570 NSSKRYIQKP-EIGIVADLASYKSIVNELDRAS 601
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 178/374 (47%), Gaps = 38/374 (10%)
Query: 16 LFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGF--ELMGCME- 72
L E +V K +VF +VE + P G V+A +M+ D GF + + C
Sbjct: 140 LIELVVSRKGKNSASSVFISLVEMRVTP---MCGFLVDA-LMITYTDLGFIPDAIQCFRL 195
Query: 73 --KERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGE 130
K R + +L + K+ + E+L N +N L++ +CK G
Sbjct: 196 SRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGN 255
Query: 131 MEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIV 190
+ A + + + +P+V+++N L+ G C G +++ + +ME + P F
Sbjct: 256 ISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVF---- 311
Query: 191 FDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQI 250
TYSAL+N C+ +++ A + ++ + G++P+ +
Sbjct: 312 -------------------------TYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346
Query: 251 SYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKM 310
+ L++ + G ++ ++ ++M +GL+P V +NTL+N FC+ G++ A V M
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406
Query: 311 LEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKL 370
+ +G+ P TY +LI+G+ R + EI +E+++ G++ + + + +L+ +CK+ ++
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRV 466
Query: 371 LDAEIVLGDMASRG 384
+DAE L +M G
Sbjct: 467 IDAERALREMLRAG 480
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 191 bits (484), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 188/378 (49%), Gaps = 29/378 (7%)
Query: 7 LPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFE 66
+P + LF L+ E+ + F+ M + P S + L D
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 67 LMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYC 126
M P+VF YN+++ +CK V+ AR LF+EM R LVP+TVTYN++IDG+
Sbjct: 249 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 308
Query: 127 KVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGF 186
KVG ++ MK EP VITYN L+ C G++ E EM+GNG
Sbjct: 309 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNG------ 362
Query: 187 SRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVV 246
L+ NV +YS L++ FC+ G +++A + + G+V
Sbjct: 363 -----------------LKPNVV------SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLV 399
Query: 247 PSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERW 306
P++ +Y L++A C G + A + +M + G++ + VT+ LI+ C+ + +AE
Sbjct: 400 PNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEEL 459
Query: 307 VKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCK 366
KM G+ P L +YN+LI+G+ + N + E+L E++ +G+KP+++ YG+ I LC
Sbjct: 460 FGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCS 519
Query: 367 DRKLLDAEIVLGDMASRG 384
K+ A++V+ +M G
Sbjct: 520 LEKIEAAKVVMNEMKECG 537
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 187/375 (49%), Gaps = 8/375 (2%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M++ V P RS N L + + V F DM+ +G RP V +Y ++ D
Sbjct: 218 MKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGD 277
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
++ L M+ + P YN ++ G KV R+ D F+EM P+ +TYN
Sbjct: 278 VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA 337
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI+ +CK G++ MK +P+V++Y+ L+ C G + A + V+M G
Sbjct: 338 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 397
Query: 181 FLPGGFSRIVFDDDSACSNGN-------GSLRANVAARIDERTYSALLNGFCRVGRIEKA 233
+P ++ D+ C GN G+ V + TY+AL++G C R+++A
Sbjct: 398 LVPNEYTYTSL-IDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEA 456
Query: 234 KEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINK 293
+E+ K+ GV+P+ SYN L++ + +++A++ +++ RG+KP + + T I
Sbjct: 457 EELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWG 516
Query: 294 FCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPN 353
C +++ A+ + +M E GI Y +L++ Y + N + +L+E+++ ++
Sbjct: 517 LCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVT 576
Query: 354 VISYGSLINCLCKDR 368
V+++ LI+ LCK++
Sbjct: 577 VVTFCVLIDGLCKNK 591
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 177/385 (45%), Gaps = 30/385 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+ G++P + N + + + + + F +M + PDV++Y +
Sbjct: 288 MKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 347
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L G E M+ + P+V Y+ ++ CK ++ A K + +M LVPN TY +
Sbjct: 348 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 407
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LID CK+G + AF L M E +V+TY L+ GLC + R+ +A E+ +M+ G
Sbjct: 408 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 467
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
+P N+A +Y+AL++GF + +++A E+L +L
Sbjct: 468 VIP-----------------------NLA------SYNALIHGFVKAKNMDRALELLNEL 498
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
G+ P + Y + C +E A +M+E G+K + + + TL++ + ++G
Sbjct: 499 KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNP 558
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKK-GMKPNVISYGS 359
+ + +M E I T+ T+ LI+G + K + I G++ N + +
Sbjct: 559 TEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTA 618
Query: 360 LINCLCKDRKLLDAEIVLGDMASRG 384
+I+ LCKD ++ A + M +G
Sbjct: 619 MIDGLCKDNQVEAATTLFEQMVQKG 643
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 161/359 (44%), Gaps = 42/359 (11%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+ +G+ P+V S + L + ++ + + DM G+ P+ +Y ++A + +
Sbjct: 358 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L F L M + V +V Y ++ GLC R+K+A +LF +M ++PN +YN
Sbjct: 418 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 477
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI G+ K M++A L +K +P ++ Y + GLCS ++ A+ V+ EM+ G
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537
Query: 181 FLPGGFSRIVFDD----------------------------------DSACSNGNGSLRA 206
D D C N S
Sbjct: 538 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 597
Query: 207 NVAARI--------DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNA 258
+ RI + ++A+++G C+ ++E A + ++V+ G+VP + +Y L++
Sbjct: 598 DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 657
Query: 259 YCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAP 317
+G V +A+ ++M E G+K + + +L+ ++ +A ++++M+ +GI P
Sbjct: 658 NFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 716
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 35/163 (21%)
Query: 243 NGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQ 302
N VP ++ L + G +E+AIQ +M+ + P + N L+++F + G+ D
Sbjct: 186 NVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDD 245
Query: 303 AERWVKKMLEKGIAPTLETY-----------------------------------NSLIN 327
+R+ K M+ G PT+ TY NS+I+
Sbjct: 246 VKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMID 305
Query: 328 GYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKL 370
G+G++ EE++ +P+VI+Y +LINC CK KL
Sbjct: 306 GFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKL 348
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/391 (30%), Positives = 185/391 (47%), Gaps = 8/391 (2%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
MR G+ P V S ++ + + L + +M G +VV+Y V
Sbjct: 137 MRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+G+EL G M V + +N +L LCK VK+ KL D+++ R ++PN TYN
Sbjct: 197 KAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNL 256
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
I G C+ GE++ A + + +P VITYN L+ GLC + + +A L +M G
Sbjct: 257 FIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEG 316
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARI-------DERTYSALLNGFCRVGRIEKA 233
P ++ C G L + D+ TY +L++G C G +A
Sbjct: 317 LEPDSYTYNTLIA-GYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRA 375
Query: 234 KEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINK 293
+ + + G+ P+ I YN L+ ++G + +A Q A +M E+GL P TFN L+N
Sbjct: 376 LALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNG 435
Query: 294 FCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPN 353
C+ G V A+ VK M+ KG P + T+N LI+GY EIL+ + G+ P+
Sbjct: 436 LCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPD 495
Query: 354 VISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
V +Y SL+N LCK K D M +G
Sbjct: 496 VYTYNSLLNGLCKTSKFEDVMETYKTMVEKG 526
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 183/378 (48%), Gaps = 29/378 (7%)
Query: 3 KDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLD 62
K GVLP++ + N + L + + + + ++E G +PDV++Y +
Sbjct: 244 KRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQ 303
Query: 63 KGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLI 122
+ +G M E + P + YN ++ G CK V+ A ++ + + VP+ TY +LI
Sbjct: 304 EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLI 363
Query: 123 DGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFL 182
DG C GE +A +L +P+VI YN L+ GL + G + +A ++ EM G +
Sbjct: 364 DGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLI 423
Query: 183 PGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVE 242
P + +T++ L+NG C++G + A ++ ++
Sbjct: 424 P-----------------------------EVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
Query: 243 NGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQ 302
G P ++NIL++ Y + +E A++ + M + G+ P T+N+L+N C+T + +
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFED 514
Query: 303 AERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLIN 362
K M+EKG AP L T+N L+ R + +LEE++ K + P+ +++G+LI+
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID 574
Query: 363 CLCKDRKLLDAEIVLGDM 380
CK+ L A + M
Sbjct: 575 GFCKNGDLDGAYTLFRKM 592
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 148/330 (44%), Gaps = 37/330 (11%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G P + + N L + E L + M+++G+ PDV +Y +
Sbjct: 452 MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSK 511
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ E M ++ P++F +N++L LC+ R++ +A L +EM ++++ P+ VT+ T
Sbjct: 512 FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGT 571
Query: 121 LIDGYCKVGEMEKAFSLKARMK-APNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN 179
LIDG+CK G+++ A++L +M+ A S TYN ++ V A ++ EM
Sbjct: 572 LIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDR 631
Query: 180 GFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAK 239
P G+ TY +++GFC+ G + + L +
Sbjct: 632 CLGPDGY-----------------------------TYRLMVDGFCKTGNVNLGYKFLLE 662
Query: 240 LVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGE 299
++ENG +PS + ++N C E V +A +M ++GL P V N C+ +
Sbjct: 663 MMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV------NTICDVDK 716
Query: 300 VD-QAERWVKKMLEKGIAPTLETYNSLING 328
+ A + V + L K T Y L +G
Sbjct: 717 KEVAAPKLVLEDLLKKSCITYYAYELLFDG 746
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 159/357 (44%), Gaps = 44/357 (12%)
Query: 4 DGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDK 63
+G +P + L + L + + LA+F + + GI+P+V+ Y ++ + +
Sbjct: 350 NGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILE 409
Query: 64 GFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLID 123
+L M ++ + P V +N+++ GLCK+ V DA L M+ + P+ T+N LI
Sbjct: 410 AAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIH 469
Query: 124 GYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP 183
GY +ME A + M +P V TYN LL GLC + + D E M G P
Sbjct: 470 GYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAP 529
Query: 184 GGFSRIVFDDDSAC-----SNGNGSLR--ANVAARIDERTYSALLNGFCRVGRIEKAKEV 236
F+ + + S C G L N + D T+ L++GFC+ G ++ A +
Sbjct: 530 NLFTFNILLE-SLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTL 588
Query: 237 LAKLVENGVVPSQI-SYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFC 295
K+ E V S +YNI+++A+ + V A + ++M +R L P T+ +++ FC
Sbjct: 589 FRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFC 648
Query: 296 ETGEVD-----------------------------------QAERWVKKMLEKGIAP 317
+TG V+ +A + +M++KG+ P
Sbjct: 649 KTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 148/336 (44%), Gaps = 76/336 (22%)
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
Y + G++++A ++ RM + EP+V +YN ++ L SG + A +V + M G P
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 185 GFS------------------RIVFDDDSA---------CSNGNGSLRANVAARIDE--- 214
+S R++ + S C+ G N A E
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFG 205
Query: 215 -----------RTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEG 263
T++ LL C+ G +++ +++L K+++ GV+P+ +YN+ + C G
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265
Query: 264 YVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYN 323
++ A++ + E+G KP +T+N LI C+ + +AE ++ KM+ +G+ P TYN
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
Query: 324 SLINGYGR---------------ISNFVK------------CFE--------ILEEIEKK 348
+LI GY + + FV C E + E K
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385
Query: 349 GMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
G+KPNVI Y +LI L +L+A + +M+ +G
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 421
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 126/304 (41%), Gaps = 48/304 (15%)
Query: 126 CKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEME---GNGFL 182
C+ M+ + K + ++ TY ++ L G+ EVLV+M GN L
Sbjct: 16 CQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHML 75
Query: 183 PGGFSRIVFDDDSACSNGNGSLRANVAARIDER-------TYSALLNGFCRVGRIEKAKE 235
G + + + G NV R+D +Y+A+++ G ++A +
Sbjct: 76 EGVYVGAM---KNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHK 132
Query: 236 VLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFC 295
V ++ + G+ P S+ I + ++C A++ M +G + + V + T++ F
Sbjct: 133 VYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFY 192
Query: 296 ETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPN-- 353
E + KML G++ L T+N L+ + + +C ++L+++ K+G+ PN
Sbjct: 193 EENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLF 252
Query: 354 ---------------------------------VISYGSLINCLCKDRKLLDAEIVLGDM 380
VI+Y +LI LCK+ K +AE+ LG M
Sbjct: 253 TYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKM 312
Query: 381 ASRG 384
+ G
Sbjct: 313 VNEG 316
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 197/394 (50%), Gaps = 14/394 (3%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K PS+ NRL +V K+++ V+++ M GIR D+ ++ +
Sbjct: 76 MVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQ 135
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ ++G M K P ++ G C+ RV DA L D+M+ P+ V YN
Sbjct: 136 VSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNA 195
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+ID CK + AF ++ P+V+TY L+ GLC+S R +DA +L +M
Sbjct: 196 IIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK 255
Query: 181 FLPG--GFSRIVFDDDSACSNGNGSLRAN------VAARIDER--TYSALLNGFCRVGRI 230
P +S ++ D+ NG L A V ID TYS+L+NG C RI
Sbjct: 256 ITPNVITYSALL---DAFVKNGK-VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRI 311
Query: 231 EKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTL 290
++A ++ +V G + +SYN L+N +C VE ++ +M +RGL + VT+NTL
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371
Query: 291 INKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGM 350
I F + G+VD+A+ + +M GI+P + TYN L+ G K I E+++K+ M
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431
Query: 351 KPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
++++Y ++I +CK K+ +A + ++ +G
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKG 465
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 189/384 (49%), Gaps = 29/384 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K G P ++ L + +++ MVE G +PD+V+Y +++ K
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 205
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
++ F+ +E++ + P+V Y ++ GLC R DA +L +M+ + + PN +TY+
Sbjct: 206 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSA 265
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L+D + K G++ +A L M + +P ++TY+ L+ GLC R+++A ++ M G
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 325
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
L D +Y+ L+NGFC+ R+E ++ ++
Sbjct: 326 CLA-----------------------------DVVSYNTLINGFCKAKRVEDGMKLFREM 356
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+ G+V + ++YN L+ + G V+KA + QM+ G+ P T+N L+ C+ GE+
Sbjct: 357 SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGEL 416
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
++A + M ++ + + TY ++I G + + + + + KG+KP++++Y ++
Sbjct: 417 EKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTM 476
Query: 361 INCLCKDRKLLDAEIVLGDMASRG 384
++ LC L + E + M G
Sbjct: 477 MSGLCTKGLLHEVEALYTKMKQEG 500
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 195/378 (51%), Gaps = 12/378 (3%)
Query: 15 RLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKE 74
RL +T + + + +F+DMV+S P +V + + + A V LK D L ME
Sbjct: 55 RLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVL 114
Query: 75 RVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKA 134
+ ++ +N+V+ C +V A + +ML P+ VT +L++G+C+ + A
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174
Query: 135 FSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG--GFSRIVFD 192
SL +M +P ++ YN ++ LC + RVNDA + E+E G P ++ +V
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV-- 232
Query: 193 DDSACSNGNGSLRANVAARIDER-------TYSALLNGFCRVGRIEKAKEVLAKLVENGV 245
+ C++ S A + + + ++ TYSALL+ F + G++ +AKE+ ++V +
Sbjct: 233 -NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI 291
Query: 246 VPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAER 305
P ++Y+ L+N C +++A Q + M +G V++NTLIN FC+ V+ +
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMK 351
Query: 306 WVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLC 365
++M ++G+ TYN+LI G+ + + K E +++ G+ P++ +Y L+ LC
Sbjct: 352 LFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLC 411
Query: 366 KDRKLLDAEIVLGDMASR 383
+ +L A ++ DM R
Sbjct: 412 DNGELEKALVIFEDMQKR 429
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 151/319 (47%), Gaps = 37/319 (11%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K + P+V + + L + V + + + +F +MV I PD+V+Y + +
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D+ ++ M + V YN ++ G CK +RV+D KLF EM R LV NTVTYNT
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI G+ + G+++KA ++M P + TYN LLGGLC +G + A + +M+
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR- 429
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
+D TY+ ++ G C+ G++E+A + L
Sbjct: 430 ----------------------------EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL 461
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
G+ P ++Y +++ C +G + + +M++ GL + T + G++
Sbjct: 462 SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS--------DGDI 513
Query: 301 DQAERWVKKMLEKGIAPTL 319
+ +KKML G AP+L
Sbjct: 514 TLSAELIKKMLSCGYAPSL 532
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 142/290 (48%), Gaps = 29/290 (10%)
Query: 95 RVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYN 154
++ DA LF +M+ P+ V +N L+ K+ + + SL +M+ + T+N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 155 CLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDE 214
++ C +V+ A +L +M G+ P D
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEP-----------------------------DR 155
Query: 215 RTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQ 274
T +L+NGFCR R+ A ++ K+VE G P ++YN ++++ C V A ++
Sbjct: 156 VTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE 215
Query: 275 MEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISN 334
+E +G++P+ VT+ L+N C + A R + M++K I P + TY++L++ + +
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275
Query: 335 FVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
++ E+ EE+ + + P++++Y SLIN LC ++ +A + M S+G
Sbjct: 276 VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 325
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 119/237 (50%), Gaps = 9/237 (3%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G L V S N L +K+ E + +F +M + G+ + V+Y ++ D
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+DK E M+ + P ++ YN++LGGLC ++ A +F++M R + + VTY T
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+I G CK G++E+A+SL + +P ++TY ++ GLC+ G +++ + +M+ G
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVL 237
+ +D S+G+ +L A + ++ Y+ L + G +KA +L
Sbjct: 501 LMK---------NDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLL 548
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 182/377 (48%), Gaps = 29/377 (7%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P+ + N L L + + +A+ MV G +PD+ +YG V D+D L
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
+ MEK ++ V +Y ++ LC + V DA LF EM ++ + PN VTYN+LI C
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
G A L + M P+V+T++ L+ G++ +A ++ EM P F
Sbjct: 303 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF- 361
Query: 188 RIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVP 247
TYS+L+NGFC R+++AK + ++ P
Sbjct: 362 ----------------------------TYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393
Query: 248 SQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWV 307
+ ++YN L+ +C VE+ ++ +M +RGL + VT+NTLI + G+ D A++
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 308 KKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKD 367
KKM+ G+ P + TY+ L++G + K + E ++K M+P++ +Y +I +CK
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513
Query: 368 RKLLDAEIVLGDMASRG 384
K+ D + ++ +G
Sbjct: 514 GKVEDGWDLFCSLSLKG 530
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 176/368 (47%), Gaps = 29/368 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G+ P+V + N L L ++ + +DM+E I P+VV++ ++A V
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L + +L M K + P +F Y+ ++ G C R+ +A+ +F+ M+ ++ PN VTYNT
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI G+CK +E+ L M + +TYN L+ GL +G + A+++ +M +G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P D TYS LL+G C+ G++EKA V L
Sbjct: 461 VPP-----------------------------DIITYSILLDGLCKYGKLEKALVVFEYL 491
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
++ + P +YNI++ C G VE + +G+KP+ + + T+I+ FC G
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 551
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
++A+ ++M E G P TYN+LI R + E+++E+ G + + +
Sbjct: 552 EEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 611
Query: 361 INCLCKDR 368
IN L R
Sbjct: 612 INMLHDGR 619
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 189/385 (49%), Gaps = 8/385 (2%)
Query: 7 LPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFE 66
LPS+ N+L + +F+ V+++ M I D+ SY + L
Sbjct: 77 LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALA 136
Query: 67 LMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYC 126
++G M K P + + +L G C +R+ +A L D+M PNTVT+NTLI G
Sbjct: 137 VLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLF 196
Query: 127 KVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGF 186
+ +A +L RM A +P + TY ++ GLC G ++ A +L +ME G +
Sbjct: 197 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME-KGKIEADV 255
Query: 187 SRIVFDDDSACSNGNGSLRANVAARIDER-------TYSALLNGFCRVGRIEKAKEVLAK 239
D+ C+ N + N+ +D + TY++L+ C GR A +L+
Sbjct: 256 VIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 315
Query: 240 LVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGE 299
++E + P+ ++++ L++A+ EG + +A + ++M +R + P T+++LIN FC
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 300 VDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGS 359
+D+A+ + M+ K P + TYN+LI G+ + + E+ E+ ++G+ N ++Y +
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 360 LINCLCKDRKLLDAEIVLGDMASRG 384
LI L + A+ + M S G
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDG 460
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 183/377 (48%), Gaps = 30/377 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K + V + + L K L +FT+M GIRP+VV+Y +
Sbjct: 246 MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 305
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L+ M + ++ P+V ++ ++ K ++ +A KL+DEM+ R++ P+ TY++
Sbjct: 306 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 365
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI+G+C +++A + M + + P+V+TYN L+ G C + RV + E+ EM G
Sbjct: 366 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 425
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
+ GN TY+ L+ G + G + A+++ K+
Sbjct: 426 LV-----------------GNTV------------TYNTLIQGLFQAGDCDMAQKIFKKM 456
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
V +GV P I+Y+IL++ C G +EKA+ E +++ ++P T+N +I C+ G+V
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 516
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
+ + KG+ P + Y ++I+G+ R + + E+++ G PN +Y +L
Sbjct: 517 EDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTL 576
Query: 361 INCLCKD-RKLLDAEIV 376
I +D K AE++
Sbjct: 577 IRARLRDGDKAASAELI 593
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 184/369 (49%), Gaps = 12/369 (3%)
Query: 25 QFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYN 84
+ + + +F +MV+S P +V + K + A + D L M+ R+ ++ YN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 85 LVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAP 144
+++ C+ ++ A + +M+ P+ VT ++L++GYC + +A +L +M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 145 NAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS--RIVFDDDSACSNGNG 202
+P+ +T+N L+ GL + ++A ++ M G P F+ +V + C G+
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV---NGLCKRGDI 236
Query: 203 SLRANVAARI-------DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNIL 255
L ++ ++ D Y+ +++ C + A + ++ G+ P+ ++YN L
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 256 VNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGI 315
+ C+ G A + M ER + P+ VTF+ LI+ F + G++ +AE+ +M+++ I
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 316 APTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEI 375
P + TY+SLING+ + + E + K PNV++Y +LI CK +++ +
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 376 VLGDMASRG 384
+ +M+ RG
Sbjct: 417 LFREMSQRG 425
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 121/262 (46%), Gaps = 30/262 (11%)
Query: 7 LPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFE 66
P+V + N L + +K+ E+ + +F +M + G+ + V+Y ++ D D +
Sbjct: 392 FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 451
Query: 67 LMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYC 126
+ M + V P + Y+++L GLCK +++ A +F+ + + P+ TYN +I+G C
Sbjct: 452 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMC 511
Query: 127 KVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGF 186
K G++E + L + +P+VI Y ++ G C G +A + EM+ +G LP
Sbjct: 512 KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP--- 568
Query: 187 SRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVV 246
+ TY+ L+ R G + E++ ++ G V
Sbjct: 569 --------------------------NSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 602
Query: 247 PSQISYNILVNAYCHEGYVEKA 268
+ ++++N H+G +EK+
Sbjct: 603 GDASTISMVINM-LHDGRLEKS 623
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 191/371 (51%), Gaps = 30/371 (8%)
Query: 14 NRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEK 73
N L +L +++ V+ +M+E + P++ +Y K V L ++++ + + + +
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246
Query: 74 ERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEK 133
+ P F Y ++ G C+ + + A K+F+EM + N V Y LI G C +++
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDE 306
Query: 134 AFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDD 193
A L +MK P+V TY L+ LC S R ++A ++ EME G P
Sbjct: 307 AMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKP---------- 356
Query: 194 DSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYN 253
N+ TY+ L++ C + EKA+E+L +++E G++P+ I+YN
Sbjct: 357 -------------NI------HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYN 397
Query: 254 ILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK 313
L+N YC G +E A+ E ME R L P+ T+N LI +C++ V +A + KMLE+
Sbjct: 398 ALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLER 456
Query: 314 GIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDA 373
+ P + TYNSLI+G R NF + +L + +G+ P+ +Y S+I+ LCK +++ +A
Sbjct: 457 KVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEA 516
Query: 374 EIVLGDMASRG 384
+ + +G
Sbjct: 517 CDLFDSLEQKG 527
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 195/402 (48%), Gaps = 26/402 (6%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P+ R+ N L + S K + V M+E + PDVV+Y ++ + D + L
Sbjct: 426 PNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
+ M + P + Y ++ LCK +RV++A LFD + + + PN V Y LIDGYCK
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGG-- 185
G++++A + +M + N P+ +T+N L+ GLC+ G++ +A + +M G P
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVST 604
Query: 186 ----FSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLV 241
R++ D D + + + D TY+ + +CR GR+ A++++AK+
Sbjct: 605 DTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMR 664
Query: 242 ENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETG--- 298
ENGV P +Y+ L+ Y G A ++M + G +PS TF +LI E
Sbjct: 665 ENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGK 724
Query: 299 ---------------EVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILE 343
E D ++KM+E + P ++Y LI G + N ++ +
Sbjct: 725 QKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFD 784
Query: 344 EIEK-KGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+++ +G+ P+ + + +L++C CK +K +A V+ DM G
Sbjct: 785 HMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVG 826
Score = 178 bits (451), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 184/383 (48%), Gaps = 30/383 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M +D V P++ + N++ E+ + +VE+G+ PD +Y + KD
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKD 268
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
LD F++ M + + Y ++ GLC RR+ +A LF +M P TY
Sbjct: 269 LDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI C +A +L M+ +P++ TY L+ LCS + ARE+L +M G
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
+P NV TY+AL+NG+C+ G IE A +V+ +
Sbjct: 389 LMP-----------------------NVI------TYNALINGYCKRGMIEDAVDVVELM 419
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+ P+ +YN L+ YC V KA+ +M ER + P VT+N+LI+ C +G
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
D A R + M ++G+ P TY S+I+ + + ++ + +E+KG+ PNV+ Y +L
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 361 INCLCKDRKLLDAEIVLGDMASR 383
I+ CK K+ +A ++L M S+
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSK 561
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 188/420 (44%), Gaps = 40/420 (9%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G+ P + L K + VF +M G R + V+Y + + + +D+
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEA 307
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
+L M+ + P+V Y +++ LC R +A L EM + PN TY LID
Sbjct: 308 MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
C + EKA L +M P+VITYN L+ G C G + DA +V+ ME P
Sbjct: 368 LCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN 427
Query: 185 G-------------------------FSRIVFDD--------DSACSNGNG-------SL 204
R V D D C +GN SL
Sbjct: 428 TRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL 487
Query: 205 RANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGY 264
+ D+ TY+++++ C+ R+E+A ++ L + GV P+ + Y L++ YC G
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547
Query: 265 VEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNS 324
V++A E+M + P+ +TFN LI+ C G++ +A +KM++ G+ PT+ T
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI 607
Query: 325 LINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
LI+ + +F + +++ G KP+ +Y + I C++ +LLDAE ++ M G
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 142/284 (50%), Gaps = 29/284 (10%)
Query: 83 YNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMK 142
YN +L L + V + ++++ EML + PN TYN +++GYCK+G +E+A +++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 143 APNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNG 202
+P TY L+ G C ++ A +V EM G
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG---------------------- 283
Query: 203 SLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHE 262
R +E Y+ L++G C RI++A ++ K+ ++ P+ +Y +L+ + C
Sbjct: 284 -------CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGS 336
Query: 263 GYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETY 322
+A+ ++MEE G+KP+ T+ LI+ C + ++A + +MLEKG+ P + TY
Sbjct: 337 ERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITY 396
Query: 323 NSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCK 366
N+LINGY + +++E +E + + PN +Y LI CK
Sbjct: 397 NALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 110/232 (47%), Gaps = 29/232 (12%)
Query: 153 YNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARI 212
YN LL L G V++ ++V +EM +D C N
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEML---------------EDKVCPNI------------ 218
Query: 213 DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTA 272
TY+ ++NG+C++G +E+A + ++K+VE G+ P +Y L+ YC ++ A +
Sbjct: 219 --YTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVF 276
Query: 273 EQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRI 332
+M +G + + V + LI+ C +D+A KM + PT+ TY LI
Sbjct: 277 NEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGS 336
Query: 333 SNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ +++E+E+ G+KPN+ +Y LI+ LC K A +LG M +G
Sbjct: 337 ERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 151/369 (40%), Gaps = 57/369 (15%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G++P + + ++L SK+ E+ +F + + G+ P+VV Y ++
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKL------------------ 102
+D+ ++ M + P+ +N ++ GLC ++K+A L
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI 607
Query: 103 -----------------FDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPN 145
F +ML P+ TY T I YC+ G + A + A+M+
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Query: 146 AEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLR 205
P + TY+ L+ G G+ N A +VL M D+ C +
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMR----------------DTGCEPSQHTFL 711
Query: 206 ANVAARID-----ERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYC 260
+ + ++ ++ L + + E+L K+VE+ V P+ SY L+ C
Sbjct: 712 SLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGIC 771
Query: 261 HEGYVEKAIQTAEQMEE-RGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTL 319
G + A + + M+ G+ PS + FN L++ C+ + ++A + V M+ G P L
Sbjct: 772 EVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQL 831
Query: 320 ETYNSLING 328
E+ LI G
Sbjct: 832 ESCKVLICG 840
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 148/364 (40%), Gaps = 16/364 (4%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M LP+ + N L L + ++ + MV+ G++P V + + + D
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGD 617
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
D + M P Y + C+ R+ DA + +M + P+ TY++
Sbjct: 618 FDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSS 677
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLC--SSGRVNDAREVLVEMEG 178
LI GY +G+ AF + RM+ EPS T+ L+ L G+ + L M
Sbjct: 678 LIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSN 737
Query: 179 NGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLA 238
+ + D+ + +V + ++Y L+ G C VG + A++V
Sbjct: 738 -----------MMEFDTVVELLEKMVEHSVTP--NAKSYEKLILGICEVGNLRVAEKVFD 784
Query: 239 KLVEN-GVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCET 297
+ N G+ PS++ +N L++ C +A + + M G P + LI +
Sbjct: 785 HMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKK 844
Query: 298 GEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISY 357
GE ++ + +L+ G + +I+G G+ +E+ +EK G K + +Y
Sbjct: 845 GEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTY 904
Query: 358 GSLI 361
LI
Sbjct: 905 SLLI 908
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 188 bits (478), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 194/390 (49%), Gaps = 6/390 (1%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K G P++ +++ L SK+ + +A+ M +G +P+ V++ + +
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 201
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ L+ M + P + Y +V+ GLCK A L ++M L P + YNT
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 261
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+IDG CK M+ A +L M+ P+V+TY+ L+ LC+ GR +DA +L +M
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 181 FLPG--GFSRIV--FDDDSACSNGNGSLRANVAARIDER--TYSALLNGFCRVGRIEKAK 234
P FS ++ F + V ID TYS+L+NGFC R+++AK
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
++ +V P ++YN L+ +C VE+ ++ +M +RGL + VT+N LI
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 441
Query: 295 CETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNV 354
+ G+ D A+ K+M+ G+ P + TYN+L++G + K + E +++ M+P +
Sbjct: 442 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501
Query: 355 ISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+Y +I +CK K+ D + +++ +G
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 191/386 (49%), Gaps = 6/386 (1%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G P+ + N L L + + +A+ MV G +PD+V+YG V D D
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
F L+ ME+ ++ P V +YN ++ GLCK + + DA LF EM + + PN VTY++LI
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
C G A L + M P V T++ L+ G++ +A ++ EM P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 185 --GFSRIV--FDDDSACSNGNGSLRANVAARI--DERTYSALLNGFCRVGRIEKAKEVLA 238
+S ++ F V+ D TY+ L+ GFC+ R+E+ EV
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 239 KLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETG 298
++ + G+V + ++YNIL+ G + A + ++M G+ P+ +T+NTL++ C+ G
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Query: 299 EVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYG 358
++++A + + + PT+ TYN +I G + +++ + KG+KP+V++Y
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540
Query: 359 SLINCLCKDRKLLDAEIVLGDMASRG 384
++I+ C+ +A+ + +M G
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDG 566
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 201/421 (47%), Gaps = 47/421 (11%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K PS+ ++L + +F+ V+++ M GI + +Y +
Sbjct: 72 MVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQ 131
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L ++G M K P++ + +L G C +R+ +A L D+M PNTVT+NT
Sbjct: 132 LPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNT 191
Query: 121 LI-----------------------------------DGYCKVGEMEKAFSLKARMKAPN 145
LI +G CK G+ + AF+L +M+
Sbjct: 192 LIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK 251
Query: 146 AEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG--GFSRIVFDDDSACSNGNGS 203
EP V+ YN ++ GLC ++DA + EME G P +S ++ C+ G S
Sbjct: 252 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI---SCLCNYGRWS 308
Query: 204 LRANVAARIDER-------TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILV 256
+ + + + ER T+SAL++ F + G++ +A+++ ++V+ + PS ++Y+ L+
Sbjct: 309 DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 368
Query: 257 NAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIA 316
N +C +++A Q E M + P VT+NTLI FC+ V++ ++M ++G+
Sbjct: 369 NGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 428
Query: 317 PTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIV 376
TYN LI G + + EI +E+ G+ PN+++Y +L++ LCK+ KL A +V
Sbjct: 429 GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVV 488
Query: 377 L 377
Sbjct: 489 F 489
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 181/367 (49%), Gaps = 29/367 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + + P V N + + L K + L +F +M GIRP+VV+Y +
Sbjct: 247 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 306
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L+ M + ++ P VF ++ ++ K ++ +A KL+DEM+ R++ P+ VTY++
Sbjct: 307 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 366
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI+G+C +++A + M + + P V+TYN L+ G C RV + EV EM G
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 426
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
+ GN TY+ L+ G + G + A+E+ ++
Sbjct: 427 LV-----------------GNTV------------TYNILIQGLFQAGDCDMAQEIFKEM 457
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
V +GV P+ ++YN L++ C G +EKA+ E ++ ++P+ T+N +I C+ G+V
Sbjct: 458 VSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 517
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
+ + KG+ P + YN++I+G+ R + + + +E+++ G PN Y +L
Sbjct: 518 EDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTL 577
Query: 361 INCLCKD 367
I +D
Sbjct: 578 IRARLRD 584
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 187/367 (50%), Gaps = 8/367 (2%)
Query: 25 QFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYN 84
+ + +A+F +MV+S P ++ + K + A + D L M+ + + + Y+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 85 LVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAP 144
+++ C+ ++ A + +M+ PN VT ++L++GYC + +A +L +M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 145 NAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSL 204
+P+ +T+N L+ GL + ++A ++ M G P + V + C G+ L
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVV-VNGLCKRGDTDL 239
Query: 205 RANVAARIDE-------RTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVN 257
N+ ++++ Y+ +++G C+ ++ A + ++ G+ P+ ++Y+ L++
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 258 AYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAP 317
C+ G A + M ER + P TF+ LI+ F + G++ +AE+ +M+++ I P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 318 TLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVL 377
++ TY+SLING+ + ++ E + K P+V++Y +LI CK +++ + V
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 378 GDMASRG 384
+M+ RG
Sbjct: 420 REMSQRG 426
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 94/181 (51%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G++ + + N L + L + + +F +MV G+ P++++Y ++
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L+K + +++ ++ P+++ YN+++ G+CK +V+D LF + + + P+ V YNT
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+I G+C+ G E+A +L MK P+ YN L+ G + E++ EM G
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
Query: 181 F 181
F
Sbjct: 602 F 602
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 203/394 (51%), Gaps = 14/394 (3%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
+ K +LP VR+++ L LV + F + +F DMV GIRPDV Y + + LKD
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L + E++ ME ++ YN+++ GLCK ++V +A + ++ ++L P+ VTY T
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCT 302
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L+ G CKV E E + M PS + L+ GL G++ +A ++ + G
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362
Query: 181 FLPGGFSRIVFDD--DSACSNGNGSLRA--------NVAARIDERTYSALLNGFCRVGRI 230
P F V++ DS C G A + R ++ TYS L++ FCR G++
Sbjct: 363 VSPNLF---VYNALIDSLC-KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKL 418
Query: 231 EKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTL 290
+ A L ++V+ G+ S YN L+N +C G + A +M + L+P+ VT+ +L
Sbjct: 419 DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSL 478
Query: 291 INKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGM 350
+ +C G++++A R +M KGIAP++ T+ +L++G R ++ E+ + +
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNV 538
Query: 351 KPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
KPN ++Y +I C++ + A L +M +G
Sbjct: 539 KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG 572
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 186/419 (44%), Gaps = 64/419 (15%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G ++ N L + L ++ + + + D+ ++PDVV+Y V +++
Sbjct: 253 MEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQE 312
Query: 61 LDKGFELMGCMEKER-----------------------------------VGPSVFVYNL 85
+ G E+M M R V P++FVYN
Sbjct: 313 FEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNA 372
Query: 86 VLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPN 145
++ LCK R+ +A LFD M L PN VTY+ LID +C+ G+++ A S M
Sbjct: 373 LIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTG 432
Query: 146 AEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLR 205
+ SV YN L+ G C G ++ A + EM N L
Sbjct: 433 LKLSVYPYNSLINGHCKFGDISAAEGFMAEMI-----------------------NKKLE 469
Query: 206 ANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYV 265
V TY++L+ G+C G+I KA + ++ G+ PS ++ L++ G +
Sbjct: 470 PTVV------TYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLI 523
Query: 266 EKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSL 325
A++ +M E +KP+ VT+N +I +CE G++ +A ++K+M EKGI P +Y L
Sbjct: 524 RDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPL 583
Query: 326 INGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
I+G + ++ + K + N I Y L++ C++ KL +A V +M RG
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG 642
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 172/358 (48%), Gaps = 29/358 (8%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
GV P++ N L ++L ++F + +F M + G+RP+ V+Y ++ LD
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
+G M + SV+ YN ++ G CK + A EM+++ L P VTY +L+ G
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
YC G++ KA L M PS+ T+ LL GL +G + DA ++ EM
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM-------- 533
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
A + + TY+ ++ G+C G + KA E L ++ E G
Sbjct: 534 ---------------------AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG 572
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
+VP SY L++ C G +A + + + + + + + L++ FC G++++A
Sbjct: 573 IVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEAL 632
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLIN 362
++M+++G+ L Y LI+G + + F +L+E+ +G+KP+ + Y S+I+
Sbjct: 633 SVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMID 690
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 155/297 (52%), Gaps = 29/297 (9%)
Query: 25 QFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYN 84
+ E+ L+V +MV+ G+ D+V YG ++ ++ KD F L+ M + P +Y
Sbjct: 627 KLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYT 686
Query: 85 LVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAP 144
++ K K+A ++D M++ VPN VTY +I+G CK G + +A L ++M+
Sbjct: 687 SMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPV 746
Query: 145 NAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSL 204
++ P+ +TY C L L + G V+ + V + N L G L
Sbjct: 747 SSVPNQVTYGCFLDIL-TKGEVDMQKAVELH---NAILKG-------------------L 783
Query: 205 RANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGY 264
AN A TY+ L+ GFCR GRIE+A E++ +++ +GV P I+Y ++N C
Sbjct: 784 LANTA------TYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRND 837
Query: 265 VEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLET 321
V+KAI+ M E+G++P V +NTLI+ C GE+ +A +ML +G+ P +T
Sbjct: 838 VKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 177/372 (47%), Gaps = 8/372 (2%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G+ PS+ + L L + + +F +M E ++P+ V+Y +E D
Sbjct: 498 MTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGD 557
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ K FE + M ++ + P + Y ++ GLC + +A+ D + N N + Y
Sbjct: 558 MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L+ G+C+ G++E+A S+ M + ++ Y L+ G +L EM G
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRG 677
Query: 181 FLPGGFSRIVFDD------DSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAK 234
P D D + G L N +E TY+A++NG C+ G + +A+
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCH-EGYVEKAIQTAEQMEERGLKPSYVTFNTLINK 293
+ +K+ VP+Q++Y ++ E ++KA++ + +GL + T+N LI
Sbjct: 738 VLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAI-LKGLLANTATYNMLIRG 796
Query: 294 FCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPN 353
FC G +++A + +M+ G++P TY ++IN R ++ K E+ + +KG++P+
Sbjct: 797 FCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856
Query: 354 VISYGSLINCLC 365
++Y +LI+ C
Sbjct: 857 RVAYNTLIHGCC 868
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G+L + + N L + E+ + T M+ G+ PD ++Y + D+ K
Sbjct: 782 GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKA 841
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
EL M ++ + P YN ++ G C + A +L +EML + L+PN T T
Sbjct: 842 IELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 183/370 (49%), Gaps = 9/370 (2%)
Query: 12 SVNRLFETLVGSKQFEKVLAVFTDMV-ESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGC 70
SVN + + E L +M + G PD ++ V + E+M
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 71 MEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGE 130
M +E P V+ YN V+ GLCK+ VK+A ++ D+M+ R+ PNTVTYNTLI CK +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 131 MEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIV 190
+E+A L + + P V T+N L+ GLC + A E+ EM G P F+ +
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 191 FDDDSACSNGNGSLRANVAARIDER-------TYSALLNGFCRVGRIEKAKEVLAKLVEN 243
D S CS G N+ +++ TY+ L++GFC+ + +A+E+ ++ +
Sbjct: 441 LID-SLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVH 499
Query: 244 GVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQA 303
GV + ++YN L++ C VE A Q +QM G KP T+N+L+ FC G++ +A
Sbjct: 500 GVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKA 559
Query: 304 ERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINC 363
V+ M G P + TY +LI+G + ++L I+ KG+ +Y +I
Sbjct: 560 ADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQG 619
Query: 364 LCKDRKLLDA 373
L + RK +A
Sbjct: 620 LFRKRKTTEA 629
Score = 177 bits (450), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 184/381 (48%), Gaps = 30/381 (7%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G+ P V + N L + L + Q + + DM G+ PD ++ ++ + DLD
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRN-LVPNTVTYNTLID 123
+ M + S N+++ G CK RV+DA EM +++ P+ T+NTL++
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 124 GYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP 183
G CK G ++ A + M +P V TYN ++ GLC G V +A EVL +M P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 184 GGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVEN 243
TY+ L++ C+ ++E+A E+ L
Sbjct: 364 NTV-----------------------------TYNTLISTLCKENQVEEATELARVLTSK 394
Query: 244 GVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQA 303
G++P ++N L+ C A++ E+M +G +P T+N LI+ C G++D+A
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454
Query: 304 ERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINC 363
+K+M G A ++ TYN+LI+G+ + + + EI +E+E G+ N ++Y +LI+
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDG 514
Query: 364 LCKDRKLLDAEIVLGDMASRG 384
LCK R++ DA ++ M G
Sbjct: 515 LCKSRRVEDAAQLMDQMIMEG 535
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 183/366 (50%), Gaps = 36/366 (9%)
Query: 25 QFE---KVLAVFTDMV-ESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGC-MEKERVGPS 79
QFE ++L+V M+ E G++PD Y + + V L K E+ M + P
Sbjct: 130 QFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSL-KLVEISHAKMSVWGIKPD 188
Query: 80 VFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKA 139
V +N+++ LC+ +++ A + ++M LVP+ T+ T++ GY + G+++ A ++
Sbjct: 189 VSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIRE 248
Query: 140 RMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEG-NGFLPGGFSRIVFDDDSACS 198
+M S ++ N ++ G C GRV DA + EM +GF P
Sbjct: 249 QMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFP--------------- 293
Query: 199 NGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNA 258
D+ T++ L+NG C+ G ++ A E++ +++ G P +YN +++
Sbjct: 294 --------------DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339
Query: 259 YCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPT 318
C G V++A++ +QM R P+ VT+NTLI+ C+ +V++A + + KGI P
Sbjct: 340 LCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399
Query: 319 LETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLG 378
+ T+NSLI G N E+ EE+ KG +P+ +Y LI+ LC KL +A +L
Sbjct: 400 VCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLK 459
Query: 379 DMASRG 384
M G
Sbjct: 460 QMELSG 465
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 174/366 (47%), Gaps = 30/366 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M ++G P V + N + L + ++ + V M+ P+ V+Y +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+++ EL + + + P V +N ++ GLC R + A +LF+EM + P+ TYN
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LID C G++++A ++ +M+ SVITYN L+ G C + + +A E+ EME +
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVH- 499
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
G SR + TY+ L++G C+ R+E A +++ ++
Sbjct: 500 ----GVSR------------------------NSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+ G P + +YN L+ +C G ++KA + M G +P VT+ TLI+ C+ G V
Sbjct: 532 IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEE-IEKKGMKPNVISYGS 359
+ A + ++ + KGI T YN +I G R + + E +E+ P+ +SY
Sbjct: 592 EVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRI 651
Query: 360 LINCLC 365
+ LC
Sbjct: 652 VFRGLC 657
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 164/376 (43%), Gaps = 33/376 (8%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G+LP V + N L + L ++ + +F +M G PD +Y +++ LD+
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
++ ME SV YN ++ G CK + ++A ++FDEM + N+VTYNTLIDG
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDG 514
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
CK +E A L +M +P TYN LL C G + A +++ M NG P
Sbjct: 515 LCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEP- 573
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
D TY L++G C+ GR+E A ++L + G
Sbjct: 574 ----------------------------DIVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQT-AEQMEERGLKPSYVTFNTLINKFCE-TGEVDQ 302
+ + +YN ++ + +AI E +E+ P V++ + C G + +
Sbjct: 606 INLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIRE 665
Query: 303 AERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLIN 362
A ++ ++LEKG P + L G +S +++ + +K S++
Sbjct: 666 AVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSE--EEVSMVK 723
Query: 363 CLCKDRKLLDAEIVLG 378
L K RK DA LG
Sbjct: 724 GLLKIRKFQDALATLG 739
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 126/263 (47%), Gaps = 8/263 (3%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
MR G P + N L ++L + ++ L + M SG V++Y ++
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ E+ ME V + YN ++ GLCK RRV+DA +L D+M+ P+ TYN+
Sbjct: 486 TREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNS 545
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVL--VEMEG 178
L+ +C+ G+++KA + M + EP ++TY L+ GLC +GRV A ++L ++M+G
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605
Query: 179 NGFLPGGFSRIVFD-----DDSACSNGNGSLRANVAARIDERTYSALLNGFCR-VGRIEK 232
P ++ ++ + N + A D +Y + G C G I +
Sbjct: 606 INLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIRE 665
Query: 233 AKEVLAKLVENGVVPSQISYNIL 255
A + L +L+E G VP S +L
Sbjct: 666 AVDFLVELLEKGFVPEFSSLYML 688
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 185/380 (48%), Gaps = 29/380 (7%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G P + L L + + +A+ MV+ G +PD+V+YG V D+D
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
L+ MEK ++ V +YN ++ GLCK + + DA LF EM ++ + P+ TY++LI
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
C G A L + M P+V+T++ L+ G++ +A ++ EM P
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
F TYS+L+NGFC R+++AK + ++
Sbjct: 363 IF-----------------------------TYSSLINGFCMHDRLDEAKHMFELMISKD 393
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
P+ ++Y+ L+ +C VE+ ++ +M +RGL + VT+ TLI+ F + + D A+
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
K+M+ G+ P + TYN L++G + K + E +++ M+P++ +Y +I +
Sbjct: 454 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 513
Query: 365 CKDRKLLDAEIVLGDMASRG 384
CK K+ D + +++ +G
Sbjct: 514 CKAGKVEDGWELFCNLSLKG 533
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 177/360 (49%), Gaps = 29/360 (8%)
Query: 25 QFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYN 84
Q LAV M++ G PD+V+ + K + L+ M + P F +
Sbjct: 133 QLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFT 192
Query: 85 LVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAP 144
++ GL + +A L D+M+ R P+ VTY T+++G CK G+++ A SL +M+
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKG 252
Query: 145 NAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSL 204
E V+ YN ++ GLC ++DA + EM+ G P F
Sbjct: 253 KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF------------------ 294
Query: 205 RANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGY 264
TYS+L++ C GR A +L+ ++E + P+ ++++ L++A+ EG
Sbjct: 295 -----------TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 343
Query: 265 VEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNS 324
+ +A + ++M +R + P T+++LIN FC +D+A+ + M+ K P + TY++
Sbjct: 344 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYST 403
Query: 325 LINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
LI G+ + + E+ E+ ++G+ N ++Y +LI+ + R +A++V M S G
Sbjct: 404 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 463
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 184/381 (48%), Gaps = 9/381 (2%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K + V N + + L K + L +FT+M GIRPDV +Y +
Sbjct: 249 MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 308
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L+ M + ++ P+V ++ ++ K ++ +A KL+DEM+ R++ P+ TY++
Sbjct: 309 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 368
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI+G+C +++A + M + + P+V+TY+ L+ G C + RV + E+ EM G
Sbjct: 369 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRG 428
Query: 181 FLPGGFSRIV----FDDDSACSNGNGSLRANVAARIDER--TYSALLNGFCRVGRIEKAK 234
+ + F C N + V+ + TY+ LL+G C+ G++ KA
Sbjct: 429 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 488
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
V L + + P +YNI++ C G VE + + +G+ P+ + +NT+I+ F
Sbjct: 489 VVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGF 548
Query: 295 CETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNV 354
C G ++A+ +KKM E G P TYN+LI R + E+++E+ G +
Sbjct: 549 CRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDA 608
Query: 355 ISYGSLINCLCK---DRKLLD 372
+ G + N L D+ LD
Sbjct: 609 STIGLVTNMLHDGRLDKSFLD 629
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 167/329 (50%), Gaps = 6/329 (1%)
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D +L G M K R PS+ +N +L + K+ + + L ++M + + TY+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
I+ +C+ ++ A ++ A+M EP ++T + LL G C S R++DA ++ +M G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARI------DERTYSALLNGFCRVGRIEKAK 234
+ P F+ N A V + D TY ++NG C+ G I+ A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
+L K+ + + + YN +++ C +++ A+ +M+ +G++P T+++LI+
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 295 CETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNV 354
C G A R + M+E+ I P + T+++LI+ + + V+ ++ +E+ K+ + P++
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 355 ISYGSLINCLCKDRKLLDAEIVLGDMASR 383
+Y SLIN C +L +A+ + M S+
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISK 392
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 185/380 (48%), Gaps = 16/380 (4%)
Query: 14 NRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEK 73
NRL + + + + + +F DMV+S P +V + K + A + + L M+
Sbjct: 56 NRLSDII----KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQT 111
Query: 74 ERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEK 133
+ ++ Y++ + C+ ++ A + +M+ P+ VT ++L++GYC +
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 134 AFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG--GFSRIVF 191
A +L +M +P T+ L+ GL + ++A ++ +M G P + +V
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV- 230
Query: 192 DDDSACSNGNGSLRANVAARI-------DERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
+ C G+ L ++ ++ D Y+ +++G C+ ++ A + ++ G
Sbjct: 231 --NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
+ P +Y+ L++ C+ G A + M ER + P+ VTF+ LI+ F + G++ +AE
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
+ +M+++ I P + TY+SLING+ + + E + K PNV++Y +LI
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408
Query: 365 CKDRKLLDAEIVLGDMASRG 384
CK +++ + + +M+ RG
Sbjct: 409 CKAKRVEEGMELFREMSQRG 428
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 2/180 (1%)
Query: 205 RANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGY 264
R+ +A D R L N + +++ A ++ +V++ PS + +N L++A
Sbjct: 41 RSFASASGDYR--EILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNK 98
Query: 265 VEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNS 324
E I EQM+ G+ T++ IN FC ++ A + KM++ G P + T +S
Sbjct: 99 FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS 158
Query: 325 LINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
L+NGY +++++ + G KP+ ++ +LI+ L K +A ++ M RG
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 185 bits (470), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 202/418 (48%), Gaps = 54/418 (12%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M GV+ + +V+ L + ++EK +V +M+ G PD +Y K +
Sbjct: 439 MLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASK 498
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
++ F L M++ + V+ Y +++ CK ++ ARK F+EM PN VTY
Sbjct: 499 MELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 558
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI Y K ++ A L M + P+++TY+ L+ G C +G+V A ++ M G+
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618
Query: 181 FLPG---GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVL 237
+P F + +DD+S R NV TY ALL+GFC+ R+E+A+++L
Sbjct: 619 DVPDVDMYFKQ--YDDNSE--------RPNVV------TYGALLDGFCKSHRVEEARKLL 662
Query: 238 AKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF--- 294
+ G P+QI Y+ L++ C G +++A + +M E G + T+++LI+++
Sbjct: 663 DAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKV 722
Query: 295 --------------------------------CETGEVDQAERWVKKMLEKGIAPTLETY 322
C+ G+ D+A + ++ M EKG P + TY
Sbjct: 723 KRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTY 782
Query: 323 NSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDM 380
++I+G+G I C E+LE + KG+ PN ++Y LI+ CK+ L A +L +M
Sbjct: 783 TAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 200/405 (49%), Gaps = 26/405 (6%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M++ G++ V + + ++ + E+ F +M E G P+VV+Y + A + K
Sbjct: 509 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 568
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLV-------- 112
+ EL M E P++ Y+ ++ G CK +V+ A ++F+ M V
Sbjct: 569 VSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK 628
Query: 113 --------PNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSG 164
PN VTY L+DG+CK +E+A L M EP+ I Y+ L+ GLC G
Sbjct: 629 QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 688
Query: 165 RVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERT-------Y 217
++++A+EV EM +GF P D L + V +++ E + Y
Sbjct: 689 KLDEAQEVKTEMSEHGF-PATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIY 747
Query: 218 SALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEE 277
+ +++G C+VG+ ++A +++ + E G P+ ++Y +++ + G +E ++ E+M
Sbjct: 748 TEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGS 807
Query: 278 RGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVK 337
+G+ P+YVT+ LI+ C+ G +D A +++M + Y +I G+ + F++
Sbjct: 808 KGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIE 865
Query: 338 CFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMAS 382
+L+EI + P + Y LI+ L K ++L A +L ++A+
Sbjct: 866 SLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 910
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 209/479 (43%), Gaps = 98/479 (20%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G +P + +++ L + + E +F +M G+ DV +Y V++
Sbjct: 474 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+++ + M + P+V Y ++ K ++V A +LF+ ML +PN VTY+
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593
Query: 121 LIDGYCKVGEMEKAFSLKARM----KAPNAE------------PSVITYNCLLGGLCSSG 164
LIDG+CK G++EKA + RM P+ + P+V+TY LL G C S
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653
Query: 165 RVNDAREVLVEMEGNGFLPGGFSRIVFDD--DSACSNGNGSLRANVAARIDER------- 215
RV +AR++L M G P ++IV+D D C G V + E
Sbjct: 654 RVEEARKLLDAMSMEGCEP---NQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLY 710
Query: 216 TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQM 275
TYS+L++ + +V R + A +VL+K++EN P+ + Y +++ C G ++A + + M
Sbjct: 711 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770
Query: 276 EERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLIN-------- 327
EE+G +P+ VT+ +I+ F G+++ +++M KG+AP TY LI+
Sbjct: 771 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL 830
Query: 328 --------------------GYGRI-----SNFVKCFEILEEIEKKGMKP---------- 352
GY ++ F++ +L+EI + P
Sbjct: 831 DVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLID 890
Query: 353 NVI---------------------------SYGSLINCLCKDRKLLDAEIVLGDMASRG 384
N+I +Y SLI LC K+ A + +M +G
Sbjct: 891 NLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKG 949
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 194/448 (43%), Gaps = 65/448 (14%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
MR LP+V + + L + KQ + V M+ G P + V A D
Sbjct: 328 MRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGD 387
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKD------ARKLFDEMLHRNLVPN 114
++L+ M K P VYN+++G +C + + A K + EML +V N
Sbjct: 388 HSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLN 447
Query: 115 TVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLV 174
+ ++ C G+ EKAFS+ M P TY+ +L LC++ ++ A +
Sbjct: 448 KINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFE 507
Query: 175 EMEGNGFLPGGFSRIVFDDDSACSNG----------------------------NGSLRA 206
EM+ G + ++ + DS C G + L+A
Sbjct: 508 EMKRGGLVADVYTYTIM-VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKA 566
Query: 207 NVAARIDER--------------TYSALLNGFCRVGRIEKAKEVLAKLV----------- 241
+ +E TYSAL++G C+ G++EKA ++ ++
Sbjct: 567 KKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY 626
Query: 242 -----ENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCE 296
+N P+ ++Y L++ +C VE+A + + M G +P+ + ++ LI+ C+
Sbjct: 627 FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 686
Query: 297 TGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVIS 356
G++D+A+ +M E G TL TY+SLI+ Y ++ ++L ++ + PNV+
Sbjct: 687 VGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 746
Query: 357 YGSLINCLCKDRKLLDAEIVLGDMASRG 384
Y +I+ LCK K +A ++ M +G
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKG 774
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 173/406 (42%), Gaps = 57/406 (14%)
Query: 4 DGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDK 63
+ +P +L L + FE+ + M + P+VV+Y + + K L +
Sbjct: 296 ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGR 355
Query: 64 GFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLID 123
++ M E PS ++N ++ C A KL +M+ +P V YN LI
Sbjct: 356 CKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIG 415
Query: 124 GYCK---------VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLV 174
C + EKA+S M A + I + LCS+G+ A V+
Sbjct: 416 SICGDKDSLNCDLLDLAEKAYS---EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIR 472
Query: 175 EMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAK 234
EM G GF+P D TYS +LN C ++E A
Sbjct: 473 EMIGQGFIP-----------------------------DTSTYSKVLNYLCNASKMELAF 503
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
+ ++ G+V +Y I+V+++C G +E+A + +M E G P+ VT+ LI+ +
Sbjct: 504 LLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAY 563
Query: 295 CETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILE----------- 343
+ +V A + ML +G P + TY++LI+G+ + K +I E
Sbjct: 564 LKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDV 623
Query: 344 -----EIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ + +PNV++YG+L++ CK ++ +A +L M+ G
Sbjct: 624 DMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 669
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 166/378 (43%), Gaps = 43/378 (11%)
Query: 10 VRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMG 69
V ++FE + GSK V F ++ RP+VV+YG ++ +++ +L+
Sbjct: 604 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663
Query: 70 CMEKERVGPSVFVYNLVLGGLCKVRRVKDAR----------------------------- 100
M E P+ VY+ ++ GLCKV ++ +A+
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723
Query: 101 ------KLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYN 154
K+ +ML + PN V Y +IDG CKVG+ ++A+ L M+ +P+V+TY
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 783
Query: 155 CLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDE 214
++ G G++ E+L M G P + V D C NG + N+ + +
Sbjct: 784 AMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL-IDHCCKNGALDVAHNLLEEMKQ 842
Query: 215 RTYSALLNGFCRV--GRIEKAKEVLAKLVENG---VVPSQISYNILVNAYCHEGYVEKAI 269
+ G+ +V G ++ E L L E G P Y +L++ +E A+
Sbjct: 843 THWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMAL 902
Query: 270 QTAEQME--ERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLIN 327
+ E++ L T+N+LI C +V+ A + +M +KG+ P ++++ SLI
Sbjct: 903 RLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIK 962
Query: 328 GYGRISNFVKCFEILEEI 345
G R S + +L+ I
Sbjct: 963 GLFRNSKISEALLLLDFI 980
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 161/359 (44%), Gaps = 21/359 (5%)
Query: 41 IRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDAR 100
RP +Y ++A + LD + M + F LCKV + ++A
Sbjct: 231 FRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREAL 290
Query: 101 KLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGL 160
L + N VP+TV Y LI G C+ E+A RM+A + P+V+TY+ LL G
Sbjct: 291 TLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGC 347
Query: 161 CSSGRVNDAREVL--VEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDE---- 214
+ ++ + VL + MEG P F+ +V + C++G+ S + ++ +
Sbjct: 348 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV---HAYCTSGDHSYAYKLLKKMVKCGHM 404
Query: 215 ---RTYSALLNGFC------RVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYV 265
Y+ L+ C ++ A++ ++++ GVV ++I+ + C G
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 464
Query: 266 EKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSL 325
EKA +M +G P T++ ++N C +++ A ++M G+ + TY +
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 326 INGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
++ + + + + E+ + G PNV++Y +LI+ K +K+ A + M S G
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 142/311 (45%), Gaps = 10/311 (3%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M +G P+ + L + L + ++ V T+M E G + +Y ++ +K
Sbjct: 665 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR 724
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
D +++ M + P+V +Y ++ GLCKV + +A KL M + PN VTY
Sbjct: 725 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 784
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+IDG+ +G++E L RM + P+ +TY L+ C +G ++ A +L EM+
Sbjct: 785 MIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH 844
Query: 181 F--LPGGFSRIVFDDDSACSNGNGSL----RANVAARIDERTYSALLNGFCRVGRIEKAK 234
+ G+ +++ + G L + + A + Y L++ + R+E A
Sbjct: 845 WPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLS--VYRLLIDNLIKAQRLEMAL 902
Query: 235 EVLAKLV--ENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLIN 292
+L ++ +V +YN L+ + C VE A Q +M ++G+ P +F +LI
Sbjct: 903 RLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIK 962
Query: 293 KFCETGEVDQA 303
++ +A
Sbjct: 963 GLFRNSKISEA 973
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 133/327 (40%), Gaps = 38/327 (11%)
Query: 64 GFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLID 123
E +G ++ R PS YN ++ K R+ A + EM NL + T
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 278
Query: 124 GYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP 183
CKVG+ +A +L ++ N P + Y L+ GLC + +A + L M LP
Sbjct: 279 SLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335
Query: 184 GGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVEN 243
NV TYS LL G ++ + K VL ++
Sbjct: 336 -----------------------NVV------TYSTLLCGCLNKKQLGRCKRVLNMMMME 366
Query: 244 GVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGE---- 299
G PS +N LV+AYC G A + ++M + G P YV +N LI C +
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426
Query: 300 --VDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISY 357
+D AE+ +ML G+ +S + K F ++ E+ +G P+ +Y
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 358 GSLINCLCKDRKLLDAEIVLGDMASRG 384
++N LC K+ A ++ +M G
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGG 513
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 114/266 (42%), Gaps = 34/266 (12%)
Query: 119 NTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEG 178
N L+ +C+ G A R+K PS TYNCL+ + R++ A + EM
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS- 262
Query: 179 NGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLA 238
AN+ R+D T C+VG K +E L
Sbjct: 263 --------------------------LANL--RMDGFTLRCFAYSLCKVG---KWREALT 291
Query: 239 KLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETG 298
+ VP + Y L++ C E+A+ +M P+ VT++TL+
Sbjct: 292 LVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKK 351
Query: 299 EVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYG 358
++ + +R + M+ +G P+ + +NSL++ Y + +++L+++ K G P + Y
Sbjct: 352 QLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYN 411
Query: 359 SLINCLCKDRKLLDAEIVLGDMASRG 384
LI +C D+ L+ +++ D+A +
Sbjct: 412 ILIGSICGDKDSLNCDLL--DLAEKA 435
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 185 bits (470), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 184/384 (47%), Gaps = 29/384 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K G P + + L + E +A+F ++ G +P+VV+Y + +
Sbjct: 144 MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRH 203
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L+ EL M P+V YN ++ GLC++ R DA L +M+ R + PN +T+
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LID + KVG++ +A L M + P V TY L+ GLC G +++AR++ ME NG
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P +E Y+ L++GFC+ R+E ++ ++
Sbjct: 324 CYP-----------------------------NEVIYTTLIHGFCKSKRVEDGMKIFYEM 354
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+ GVV + I+Y +L+ YC G + A + QM R P T+N L++ C G+V
Sbjct: 355 SQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKV 414
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
++A + M ++ + + TY +I G ++ F++ + KGMKPNVI+Y ++
Sbjct: 415 EKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTM 474
Query: 361 INCLCKDRKLLDAEIVLGDMASRG 384
I+ C+ + +A+ + M G
Sbjct: 475 ISGFCRRGLIHEADSLFKKMKEDG 498
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 184/387 (47%), Gaps = 12/387 (3%)
Query: 7 LPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFE 66
LPS+ RL + +++ V+++F M GI P + + + + +
Sbjct: 80 LPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASC 139
Query: 67 LMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYC 126
+G M K P + + +L G C R++DA LFD++L PN VTY TLI C
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199
Query: 127 KVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG-- 184
K + A L +M + P+V+TYN L+ GLC GR DA +L +M P
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259
Query: 185 GFSRIVFDDDSACSNGN-------GSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVL 237
F+ ++ D+ G ++ ++ D TY +L+NG C G +++A+++
Sbjct: 260 TFTALI---DAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF 316
Query: 238 AKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCET 297
+ NG P+++ Y L++ +C VE ++ +M ++G+ + +T+ LI +C
Sbjct: 317 YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLV 376
Query: 298 GEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISY 357
G D A+ +M + P + TYN L++G K I E + K+ M N+++Y
Sbjct: 377 GRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTY 436
Query: 358 GSLINCLCKDRKLLDAEIVLGDMASRG 384
+I +CK K+ DA + + S+G
Sbjct: 437 TIIIQGMCKLGKVEDAFDLFCSLFSKG 463
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 175/370 (47%), Gaps = 16/370 (4%)
Query: 25 QFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYN 84
QF L +FT MV S P ++ + + + + D L M+ + P + N
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 85 LVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAP 144
+V+ +C + A +M+ P+ VT+ +L++GYC +E A +L ++
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 145 NAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG---------GFSRIVFDDDS 195
+P+V+TY L+ LC + +N A E+ +M NG P G I D+
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 196 ACSNGNGSLRANVAARIDER--TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYN 253
A LR + RI+ T++AL++ F +VG++ +AKE+ +++ V P +Y
Sbjct: 243 A-----WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYG 297
Query: 254 ILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK 313
L+N C G +++A Q ME G P+ V + TLI+ FC++ V+ + +M +K
Sbjct: 298 SLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK 357
Query: 314 GIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDA 373
G+ TY LI GY + E+ ++ + P++ +Y L++ LC + K+ A
Sbjct: 358 GVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKA 417
Query: 374 EIVLGDMASR 383
++ M R
Sbjct: 418 LMIFEYMRKR 427
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 135/283 (47%), Gaps = 29/283 (10%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K + P+V + L + V + + ++ M++ + PDV +YG + M
Sbjct: 249 MMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGL 308
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
LD+ ++ ME+ P+ +Y ++ G CK +RV+D K+F EM + +V NT+TY
Sbjct: 309 LDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTV 368
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI GYC VG + A + +M + A P + TYN LL GLC +G+V A + M
Sbjct: 369 LIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR- 427
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
I+ TY+ ++ G C++G++E A ++ L
Sbjct: 428 ----------------------------EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSL 459
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPS 283
G+ P+ I+Y +++ +C G + +A ++M+E G P+
Sbjct: 460 FSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 80/156 (51%)
Query: 229 RIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFN 288
+ A ++ ++V + +PS I + L++ + I EQM+ G+ P T N
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 289 TLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKK 348
+++ C + + +A ++ KM++ G P L T+ SL+NGY + + ++I
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 349 GMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
G KPNV++Y +LI CLCK+R L A + M + G
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNG 218
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 184/380 (48%), Gaps = 29/380 (7%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G P + L L + + +A+ MV+ G +P++V+YG V D+D
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
F L+ ME ++ +V +Y+ V+ LCK R DA LF EM ++ + PN +TY++LI
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
C A L + M P+V+T+N L+ G++ +A ++ EM P
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
F TYS+L+NGFC R+++AK + ++
Sbjct: 365 IF-----------------------------TYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
P+ ++YN L+N +C +++ ++ +M +RGL + VT+ TLI+ F + + D A+
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 455
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
K+M+ G+ P + TYN+L++G + K + E +++ M+P + +Y +I +
Sbjct: 456 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 515
Query: 365 CKDRKLLDAEIVLGDMASRG 384
CK K+ D + ++ +G
Sbjct: 516 CKAGKVEDGWDLFCSLSLKG 535
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 199/393 (50%), Gaps = 12/393 (3%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K LPS+ N+L + K+F+ V+++ M GI ++ +Y +
Sbjct: 76 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 135
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ L+G M K PS+ + +L G C +R+ DA L D+M+ P+T+T+ T
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI G + +A +L RM +P+++TY ++ GLC G ++ A +L +ME
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 255
Query: 181 FLPGG--FSRIVFDDDSACSNGNGSLRANVAARIDER-------TYSALLNGFCRVGRIE 231
+S ++ DS C + N+ ++ + TYS+L++ C R
Sbjct: 256 IEANVVIYSTVI---DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWS 312
Query: 232 KAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLI 291
A +L+ ++E + P+ +++N L++A+ EG + +A + ++M +R + P T+++LI
Sbjct: 313 DASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 372
Query: 292 NKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMK 351
N FC +D+A+ + M+ K P + TYN+LING+ + + E+ E+ ++G+
Sbjct: 373 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLV 432
Query: 352 PNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
N ++Y +LI+ + R +A++V M S G
Sbjct: 433 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 158/308 (51%), Gaps = 6/308 (1%)
Query: 16 LFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKER 75
+ ++L + + L +FT+M G+RP+V++Y + + L+ M + +
Sbjct: 266 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK 325
Query: 76 VGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAF 135
+ P+V +N ++ K ++ +A KL+DEM+ R++ P+ TY++LI+G+C +++A
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 385
Query: 136 SLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIV----F 191
+ M + + P+V+TYN L+ G C + R+++ E+ EM G + + F
Sbjct: 386 HMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445
Query: 192 DDDSACSNGNGSLRANVAARIDER--TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQ 249
C N + V+ + TY+ LL+G C+ G++EKA V L + + P+
Sbjct: 446 FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 505
Query: 250 ISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKK 309
+YNI++ C G VE + +G+KP + +NT+I+ FC G ++A+ +K
Sbjct: 506 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRK 565
Query: 310 MLEKGIAP 317
M E G P
Sbjct: 566 MREDGPLP 573
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 183/369 (49%), Gaps = 8/369 (2%)
Query: 23 SKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFV 82
S + + + +F MV+S P + + K + A +K D L M++ + +++
Sbjct: 63 SMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYT 122
Query: 83 YNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMK 142
YN+++ C+ ++ A L +M+ P+ VT ++L++GYC + A +L +M
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 143 APNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNG 202
P IT+ L+ GL + ++A ++ M G P + V + C G+
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV-VNGLCKRGDI 241
Query: 203 SLRANV-----AARIDERT--YSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNIL 255
L N+ AA+I+ YS +++ C+ + A + ++ GV P+ I+Y+ L
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 256 VNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGI 315
++ C+ A + M ER + P+ VTFN LI+ F + G++ +AE+ +M+++ I
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 316 APTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEI 375
P + TY+SLING+ + + E + K PNV++Y +LIN CK +++ +
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421
Query: 376 VLGDMASRG 384
+ +M+ RG
Sbjct: 422 LFREMSQRG 430
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 64/275 (23%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P+V + N L + V + + ++ +M++ I PD+ +Y + M LD+ +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLV--------------- 112
M + P+V YN ++ G CK +R+ + +LF EM R LV
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Query: 113 --------------------PNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVIT 152
PN +TYNTL+DG CK G++EKA + ++ EP++ T
Sbjct: 448 ARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 507
Query: 153 YNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARI 212
YN ++ G+C +G+V D ++ + G P
Sbjct: 508 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP----------------------------- 538
Query: 213 DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVP 247
D Y+ +++GFCR G E+A + K+ E+G +P
Sbjct: 539 DVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 78/148 (52%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G++ + + L ++ + VF MV G+ P++++Y ++
Sbjct: 426 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 485
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L+K + +++ ++ P+++ YN+++ G+CK +V+D LF + + + P+ + YNT
Sbjct: 486 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNT 545
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEP 148
+I G+C+ G E+A +L +M+ P
Sbjct: 546 MISGFCRKGLKEEADALFRKMREDGPLP 573
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 84/168 (50%)
Query: 217 YSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQME 276
Y +L +++ A + +V++ +PS +N L++A + I E+M+
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 277 ERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFV 336
G+ + T+N LIN FC ++ A + KM++ G P++ T +SL+NGY
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 337 KCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+++++ + G +P+ I++ +LI+ L K +A ++ M RG
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 59/117 (50%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M DGV P++ + N L + L + + EK + VF + S + P + +Y +E
Sbjct: 461 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 520
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVT 117
++ G++L + + V P V +YN ++ G C+ ++A LF +M +P++ T
Sbjct: 521 VEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 180/369 (48%), Gaps = 29/369 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G P + L L + + +A+ MV+ G +PD+V+YG V D
Sbjct: 174 MVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGD 233
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
D L+ ME ++ +V +Y+ V+ LCK R DA LF EM ++ + PN +TY++
Sbjct: 234 TDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 293
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI C G A L + M P+++T++ L+ G++ A ++ EM
Sbjct: 294 LISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRS 353
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P F TYS+L+NGFC + R+ +AK++L +
Sbjct: 354 IDPNIF-----------------------------TYSSLINGFCMLDRLGEAKQMLELM 384
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+ +P+ ++YN L+N +C V+K ++ +M +RGL + VT+ TLI+ F + +
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 444
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
D A+ K+M+ G+ P + TYN L++G + K + E +++ M+P++ +Y +
Sbjct: 445 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 504
Query: 361 INCLCKDRK 369
I +CK K
Sbjct: 505 IEGMCKAGK 513
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 195/393 (49%), Gaps = 12/393 (3%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + PS+ ++L + +F+ V++ M GI ++ +Y +
Sbjct: 69 MAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSR 128
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L L+G M K P + N +L G C R+ DA L D+M+ P+TVT+ T
Sbjct: 129 LSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTT 188
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI G + +A +L RM +P ++TY ++ GLC G + A +L +ME
Sbjct: 189 LIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAK 248
Query: 181 FLPGG--FSRIVFDDDSACSNGNGSLRANVAARIDER-------TYSALLNGFCRVGRIE 231
+S ++ DS C + N+ ++ + TYS+L++ C GR
Sbjct: 249 IEANVVIYSTVI---DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWS 305
Query: 232 KAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLI 291
A +L+ ++E + P+ ++++ L++A+ +G + KA + E+M +R + P+ T+++LI
Sbjct: 306 DASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLI 365
Query: 292 NKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMK 351
N FC + +A++ ++ M+ K P + TYN+LING+ + K E+ E+ ++G+
Sbjct: 366 NGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLV 425
Query: 352 PNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
N ++Y +LI+ + R +A++V M S G
Sbjct: 426 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 458
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 180/377 (47%), Gaps = 29/377 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K G P + ++N L + +A+ MVE G +PD V++ + +
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ L+ M + P + Y V+ GLCK A L ++M + N V Y+T
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+ID CK + A +L M+ P+VITY+ L+ LC+ GR +DA +L +M
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P + T+SAL++ F + G++ KA+++ ++
Sbjct: 319 INP-----------------------------NLVTFSALIDAFVKKGKLVKAEKLYEEM 349
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
++ + P+ +Y+ L+N +C + +A Q E M + P+ VT+NTLIN FC+ V
Sbjct: 350 IKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRV 409
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
D+ ++M ++G+ TY +LI+G+ + + + +++ G+ PN+++Y L
Sbjct: 410 DKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 469
Query: 361 INCLCKDRKLLDAEIVL 377
++ LCK+ KL A +V
Sbjct: 470 LDGLCKNGKLAKAMVVF 486
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 186/369 (50%), Gaps = 12/369 (3%)
Query: 25 QFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYN 84
+ + + +F M +S P ++ + K + A + D ME + +++ YN
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 85 LVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAP 144
+++ C+ R+ A L +M+ P+ VT N+L++G+C + A +L +M
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 145 NAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG--GFSRIVFDDDSACSNGNG 202
+P +T+ L+ GL + ++A ++ M G P + +V + C G+
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV---NGLCKRGDT 234
Query: 203 SLRANV-----AARIDERT--YSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNIL 255
L N+ AA+I+ YS +++ C+ + A + ++ GV P+ I+Y+ L
Sbjct: 235 DLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 294
Query: 256 VNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGI 315
++ C+ G A + M ER + P+ VTF+ LI+ F + G++ +AE+ ++M+++ I
Sbjct: 295 ISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI 354
Query: 316 APTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEI 375
P + TY+SLING+ + + ++LE + +K PNV++Y +LIN CK +++
Sbjct: 355 DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGME 414
Query: 376 VLGDMASRG 384
+ +M+ RG
Sbjct: 415 LFREMSQRG 423
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 188/384 (48%), Gaps = 32/384 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K G P V +V+ L + + + + M E G RPDVV Y ++ + +
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGL 189
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
++ EL ME++ V YN ++ GLC R DA +L +M+ R++VPN +T+
Sbjct: 190 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 249
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+ID + K G+ +A L M +P V TYN L+ GLC GRV++A+++L M G
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
LP D TY+ L+NGFC+ R+++ ++ ++
Sbjct: 310 CLP-----------------------------DVVTYNTLINGFCKSKRVDEGTKLFREM 340
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+ G+V I+YN ++ Y G + A + +M+ R P+ T++ L+ C V
Sbjct: 341 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRV 397
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
++A + M + I + TYN +I+G +I N +++ + KG+KP+V+SY ++
Sbjct: 398 EKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTM 457
Query: 361 INCLCKDRKLLDAEIVLGDMASRG 384
I+ C+ R+ ++++ M G
Sbjct: 458 ISGFCRKRQWDKSDLLYRKMQEDG 481
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 184/379 (48%), Gaps = 30/379 (7%)
Query: 6 VLPSV-RSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
++P + R R F T S E+ + +F M++S P +V + K + K+ D
Sbjct: 29 IVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLV 88
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
L ME +G ++ YN+V+ LC+ R A + +M+ P+ VT ++LI+G
Sbjct: 89 ISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLING 148
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
+C+ + A L ++M+ P V+ YN ++ G C G VNDA E+ ME +G
Sbjct: 149 FCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG---- 204
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
R D TY++L+ G C GR A ++ +V
Sbjct: 205 -------------------------VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 239
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
+VP+ I++ +++ + EG +A++ E+M R + P T+N+LIN C G VD+A+
Sbjct: 240 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 299
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
+ + M+ KG P + TYN+LING+ + + ++ E+ ++G+ + I+Y ++I
Sbjct: 300 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 359
Query: 365 CKDRKLLDAEIVLGDMASR 383
+ + A+ + M SR
Sbjct: 360 FQAGRPDAAQEIFSRMDSR 378
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 160/340 (47%), Gaps = 35/340 (10%)
Query: 48 YGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEML 107
+G+ +L++ +L M + R PS+ ++ VL + K + LF M
Sbjct: 37 WGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHME 96
Query: 108 HRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVN 167
+ + +YN +I+ C+ A S+ +M EP V+T + L+ G C RV
Sbjct: 97 VCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVF 156
Query: 168 DAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRV 227
DA +++ +ME GF P D Y+ +++G C++
Sbjct: 157 DAIDLVSKMEEMGFRP-----------------------------DVVIYNTIIDGSCKI 187
Query: 228 GRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTF 287
G + A E+ ++ +GV ++YN LV C G A + M R + P+ +TF
Sbjct: 188 GLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITF 247
Query: 288 NTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLING---YGRISNFVKCFEILEE 344
+I+ F + G+ +A + ++M + + P + TYNSLING +GR+ + ++L+
Sbjct: 248 TAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVD---EAKQMLDL 304
Query: 345 IEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ KG P+V++Y +LIN CK +++ + + +MA RG
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 190/372 (51%), Gaps = 12/372 (3%)
Query: 21 VGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSV 80
+ S QF + L +FT MVES P ++ + K + +K D L ++ V +
Sbjct: 48 LHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDL 107
Query: 81 FVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKAR 140
+ NL++ C+ + A +M+ P+ VT+ +LI+G+C ME+A S+ +
Sbjct: 108 YTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQ 167
Query: 141 MKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG--GFSRIVFDDDSACS 198
M +P V+ Y ++ LC +G VN A + +ME G P ++ +V + C+
Sbjct: 168 MVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV---NGLCN 224
Query: 199 NG-----NGSLRANVAARI--DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQIS 251
+G + LR +I D T++AL++ F + G+ A+E+ +++ + P+ +
Sbjct: 225 SGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFT 284
Query: 252 YNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKML 311
Y L+N +C EG V++A Q ME +G P V + +LIN FC+ +VD A + +M
Sbjct: 285 YTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMS 344
Query: 312 EKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLL 371
+KG+ TY +LI G+G++ E+ + +G+ PN+ +Y L++CLC + K+
Sbjct: 345 QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK 404
Query: 372 DAEIVLGDMASR 383
A ++ DM R
Sbjct: 405 KALMIFEDMQKR 416
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 197/399 (49%), Gaps = 21/399 (5%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K G P + + L + E+ +++ MVE GI+PDVV Y +++
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGH 192
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
++ L ME + P V +Y ++ GLC R +DA L M R + P+ +T+N
Sbjct: 193 VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNA 252
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LID + K G+ A L M + P++ TY L+ G C G V++AR++ ME G
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG 312
Query: 181 FLP---------GGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIE 231
P GF + DD+ S + I TY+ L+ GF +VG+
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI---TYTTLIQGFGQVGKPN 369
Query: 232 KAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEER---GLKPSYVTFN 288
A+EV + +V GV P+ +YN+L++ C+ G V+KA+ E M++R G+ P+ T+N
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429
Query: 289 TLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGY---GRISNFVKCFEILEEI 345
L++ C G++++A + M ++ + + TY +I G G++ N V F +
Sbjct: 430 VLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLF---CSL 486
Query: 346 EKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
KG+KPNV++Y ++I+ L ++ +A ++ M G
Sbjct: 487 PSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 183/382 (47%), Gaps = 32/382 (8%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
GV + + N L S Q + M++ G PD+V++ + + +++
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
++ M + + P V +Y ++ LCK V A LFD+M + + P+ V Y +L++G
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
C G A SL M +P VIT+N L+ G+ DA E+ EM
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM-------- 273
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
+R ++A I TY++L+NGFC G +++A+++ + G
Sbjct: 274 -------------------IRMSIAPNI--FTYTSLINGFCMEGCVDEARQMFYLMETKG 312
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
P ++Y L+N +C V+ A++ +M ++GL + +T+ TLI F + G+ + A+
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQ 372
Query: 305 RWVKKMLEKGIAPTLETYNSLINGY---GRISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
M+ +G+ P + TYN L++ G++ + FE +++ E G+ PN+ +Y L+
Sbjct: 373 EVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLL 432
Query: 362 NCLCKDRKLLDAEIVLGDMASR 383
+ LC + KL A +V DM R
Sbjct: 433 HGLCYNGKLEKALMVFEDMRKR 454
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 161/366 (43%), Gaps = 56/366 (15%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G+ P V + ++L + L++F M GIRPDVV Y V
Sbjct: 168 MVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGR 227
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L+ M K ++ P V +N ++ K + DA +L++EM+ ++ PN TY +
Sbjct: 228 WRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI+G+C G +++A + M+ P V+ Y L+ G C +V+DA ++ EM G
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
Query: 181 FLPGGFSRIVFDDDSACSNGNGSL-RANVAARI-----------DERTYSALLNGFCRVG 228
+ + G G + + NVA + + RTY+ LL+ C G
Sbjct: 348 LTGNTITY------TTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG 401
Query: 229 RIEKAKEVLAKLVE---NGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEER------- 278
+++KA + + + +GV P+ +YN+L++ C+ G +EKA+ E M +R
Sbjct: 402 KVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGII 461
Query: 279 ----------------------------GLKPSYVTFNTLINKFCETGEVDQAERWVKKM 310
G+KP+ VT+ T+I+ G +A +KM
Sbjct: 462 TYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Query: 311 LEKGIA 316
E G++
Sbjct: 522 KEDGVS 527
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 138/290 (47%), Gaps = 29/290 (10%)
Query: 95 RVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYN 154
+ +A LF M+ +P+ + + L++ K+ + + +L ++ + T N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 155 CLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDE 214
L+ C S + A L +M GF P D
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEP-----------------------------DI 142
Query: 215 RTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQ 274
T+++L+NGFC R+E+A ++ ++VE G+ P + Y ++++ C G+V A+ +Q
Sbjct: 143 VTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQ 202
Query: 275 MEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISN 334
ME G++P V + +L+N C +G A+ ++ M ++ I P + T+N+LI+ + +
Sbjct: 203 MENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGK 262
Query: 335 FVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
F+ E+ E+ + + PN+ +Y SLIN C + + +A + M ++G
Sbjct: 263 FLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG 312
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 182/380 (47%), Gaps = 29/380 (7%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G P + N L L + + +A+ MV G +PD+V+YG V D+D
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
L+ ME+ ++ P V +YN ++ LC + V DA LF EM ++ + PN VTYN+LI
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
C G A L + M P+V+T++ L+ G++ +A ++ EM P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
F TYS+L+NGFC R+++AK + ++
Sbjct: 361 IF-----------------------------TYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
P+ ++YN L+ +C V++ ++ +M +RGL + VT+ TLI+ F + E D A+
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
K+M+ G+ P + TY+ L++G + E +++ M+P++ +Y +I +
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511
Query: 365 CKDRKLLDAEIVLGDMASRG 384
CK K+ D + ++ +G
Sbjct: 512 CKAGKVEDGWDLFCSLSLKG 531
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 189/384 (49%), Gaps = 29/384 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+ G+ ++ + + L Q LAV M++ G PD+V+ +
Sbjct: 107 MQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR 166
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ L+G M + P F +N ++ GL + R +A L D M+ + P+ VTY
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+++G CK G+++ A SL +M+ EP V+ YN ++ LC+ VNDA + EM+ G
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
+R NV TY++L+ C GR A +L+ +
Sbjct: 287 -----------------------IRPNVV------TYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+E + P+ ++++ L++A+ EG + +A + ++M +R + P T+++LIN FC +
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
D+A+ + M+ K P + TYN+LI G+ + + E+ E+ ++G+ N ++Y +L
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 361 INCLCKDRKLLDAEIVLGDMASRG 384
I+ + R+ +A+IV M S G
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDG 461
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 182/374 (48%), Gaps = 6/374 (1%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + + P V N + + L K L +FT+M GIRP+VV+Y +
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L+ M + ++ P+V ++ ++ K ++ +A KL+DEM+ R++ P+ TY++
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 366
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI+G+C +++A + M + + P+V+TYN L+ G C + RV++ E+ EM G
Sbjct: 367 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG 426
Query: 181 FLPGGFSRIV----FDDDSACSNGNGSLRANVAARI--DERTYSALLNGFCRVGRIEKAK 234
+ + F C N + V+ + D TYS LL+G C G++E A
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL 486
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
V L + + P +YNI++ C G VE + +G+KP+ VT+ T+++ F
Sbjct: 487 VVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 546
Query: 295 CETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNV 354
C G ++A+ ++M E+G P TYN+LI + R + E++ E+ +
Sbjct: 547 CRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA 606
Query: 355 ISYGSLINCLCKDR 368
+ G + N L R
Sbjct: 607 STIGLVTNMLHDGR 620
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 174/337 (51%), Gaps = 22/337 (6%)
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
LD L G M K R PS+ ++ +L + K+ + L ++M + + N TY+
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI+ +C+ ++ A ++ A+M EP ++T N LL G C R++DA ++ +M G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAA--------------RIDERTYSALLNGFCR 226
+ P F+ F+ + +G R N A+ + D TY ++NG C+
Sbjct: 182 YQPDSFT---FN-----TLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCK 233
Query: 227 VGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVT 286
G I+ A +L K+ + + P + YN +++A C+ V A+ +M+ +G++P+ VT
Sbjct: 234 RGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 293
Query: 287 FNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIE 346
+N+LI C G A R + M+E+ I P + T+++LI+ + + V+ ++ +E+
Sbjct: 294 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353
Query: 347 KKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
K+ + P++ +Y SLIN C +L +A+ + M S+
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 390
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 137/289 (47%), Gaps = 29/289 (10%)
Query: 95 RVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYN 154
++ DA LF +M+ P+ V ++ L+ K+ + + SL +M+ ++ TY+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 155 CLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDE 214
L+ C +++ A VL +M G+ P D
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEP-----------------------------DI 151
Query: 215 RTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQ 274
T ++LLNGFC RI A ++ ++VE G P ++N L++ +A+ ++
Sbjct: 152 VTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDR 211
Query: 275 MEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISN 334
M +G +P VT+ ++N C+ G++D A +KKM + I P + YN++I+ N
Sbjct: 212 MVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKN 271
Query: 335 FVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
+ E++ KG++PNV++Y SLI CLC + DA +L DM R
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 320
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 80/156 (51%)
Query: 229 RIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFN 288
+++ A + +V++ PS + ++ L++A + I EQM+ G+ + T++
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 289 TLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKK 348
LIN FC ++ A + KM++ G P + T NSL+NG+ + ++ ++ +
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 349 GMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
G +P+ ++ +LI+ L + + +A ++ M +G
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG 216
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 196/409 (47%), Gaps = 42/409 (10%)
Query: 15 RLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKE 74
++F S + + L + MV G PDV+ K ++ L+++ K +M +EK
Sbjct: 94 KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKF 153
Query: 75 RVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKA 134
P VF YN ++ G CK+ R+ DA ++ D M ++ P+TVTYN +I C G+++ A
Sbjct: 154 G-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 135 FSLKARMKAPNAEPSVITY-----------------------------------NCLLGG 159
+ ++ + N +P+VITY N ++ G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 160 LCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFD----DDSACSNGNGSLRANVAARIDER 215
+C G V+ A E++ +E G P S + + G + + + D
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332
Query: 216 --TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAE 273
TYS L+ CR G+IE+A +L + E G+ P SY+ L+ A+C EG ++ AI+ E
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392
Query: 274 QMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRIS 333
M G P V +NT++ C+ G+ DQA K+ E G +P +YN++ +
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Query: 334 NFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMAS 382
+ ++ ++ E+ G+ P+ I+Y S+I+CLC++ + +A +L DM S
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 501
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 182/384 (47%), Gaps = 8/384 (2%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P V + N L + + V M PD V+Y + + LD ++
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
+ + + P+V Y +++ V +A KL DEML R L P+ TYNT+I G CK
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
G +++AF + ++ EP VI+YN LL L + G+ + +++ +M P +
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 188 RIVFDDDSACSNGNGSLRANVAARIDER-------TYSALLNGFCRVGRIEKAKEVLAKL 240
+ + C +G N+ + E+ +Y L+ FCR GR++ A E L +
Sbjct: 336 YSILIT-TLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+ +G +P ++YN ++ C G ++A++ ++ E G P+ ++NT+ + +G+
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
+A + +M+ GI P TYNS+I+ R + FE+L ++ P+V++Y +
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514
Query: 361 INCLCKDRKLLDAEIVLGDMASRG 384
+ CK ++ DA VL M G
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNG 538
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 174/374 (46%), Gaps = 20/374 (5%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
MR P + N + +L + + L V ++ +P V++Y +EA ++
Sbjct: 184 MRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGG 243
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D+ +LM M + P +F YN ++ G+CK V A ++ + + P+ ++YN
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNI 303
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L+ G+ E+ L +M + +P+V+TY+ L+ LC G++ +A +L M+ G
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 181 FLPGGFSRIVFDDDSA--CSNGNGSLRANVAARIDER-----------TYSALLNGFCRV 227
P +S +D A C G R +VA E Y+ +L C+
Sbjct: 364 LTPDAYS---YDPLIAAFCREG----RLDVAIEFLETMISDGCLPDIVNYNTVLATLCKN 416
Query: 228 GRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTF 287
G+ ++A E+ KL E G P+ SYN + +A G +A+ +M G+ P +T+
Sbjct: 417 GKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITY 476
Query: 288 NTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEK 347
N++I+ C G VD+A + M P++ TYN ++ G+ + +LE +
Sbjct: 477 NSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVG 536
Query: 348 KGMKPNVISYGSLI 361
G +PN +Y LI
Sbjct: 537 NGCRPNETTYTVLI 550
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 160/336 (47%), Gaps = 12/336 (3%)
Query: 4 DGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDK 63
D P+V + L E + ++ L + +M+ G++PD+ +Y + +D+
Sbjct: 222 DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDR 281
Query: 64 GFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLID 123
FE++ +E + P V YN++L L + ++ KL +M PN VTY+ LI
Sbjct: 282 AFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILIT 341
Query: 124 GYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP 183
C+ G++E+A +L MK P +Y+ L+ C GR++ A E L M +G LP
Sbjct: 342 TLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLP 401
Query: 184 G--GFSRIVFDDDSACSNGNGSLRANVAARIDE-------RTYSALLNGFCRVGRIEKAK 234
++ ++ + C NG + ++ E +Y+ + + G +A
Sbjct: 402 DIVNYNTVL---ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
++ +++ NG+ P +I+YN +++ C EG V++A + M PS VT+N ++ F
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518
Query: 295 CETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYG 330
C+ ++ A ++ M+ G P TY LI G G
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIG 554
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 140/294 (47%), Gaps = 30/294 (10%)
Query: 91 CKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSV 150
C+ ++ L + M+ + P+ + LI G+ + + KA + ++ +P V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEK-FGQPDV 158
Query: 151 ITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAA 210
YN L+ G C R++DA VL M F P
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSP--------------------------- 191
Query: 211 RIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQ 270
D TY+ ++ C G+++ A +VL +L+ + P+ I+Y IL+ A EG V++A++
Sbjct: 192 --DTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALK 249
Query: 271 TAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYG 330
++M RGLKP T+NT+I C+ G VD+A V+ + KG P + +YN L+
Sbjct: 250 LMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALL 309
Query: 331 RISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ + +++ ++ + PNV++Y LI LC+D K+ +A +L M +G
Sbjct: 310 NQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G P+ S N +F L S + L + +M+ +GI PD ++Y + +D+
Sbjct: 433 GCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEA 492
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
FEL+ M PSV YN+VL G CK R++DA + + M+ PN TY LI+G
Sbjct: 493 FELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552
Query: 125 YCKVGEMEKAFSL 137
G +A L
Sbjct: 553 IGFAGYRAEAMEL 565
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M DG LP + + N + TL + + ++ L +F + E G P+ SY A D
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 453
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ ++ M + P YN ++ LC+ V +A +L +M P+ VTYN
Sbjct: 454 KIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNI 513
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREV 172
++ G+CK +E A ++ M P+ TY L+ G+ +G +A E+
Sbjct: 514 VLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 290 LINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKG 349
+ ++ C +G ++ ++ M+ KG P + LI G+ + N K ++E +EK G
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 350 MKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
+P+V +Y +LIN CK ++ DA VL M S+
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSK 187
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 200/394 (50%), Gaps = 14/394 (3%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K PS+ ++L + K+F+ V++ M G+ ++ +Y +
Sbjct: 56 MVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQ 115
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L ++G M K GPS+ N +L G C R+ +A L D+M+ P+TVT+ T
Sbjct: 116 LSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTT 175
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L+ G + + +A +L RM +P ++TY ++ GLC G + A +L +ME G
Sbjct: 176 LVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME-KG 234
Query: 181 FLPGG---FSRIVFDDDSACSNGNGSLRANVAARIDER-------TYSALLNGFCRVGRI 230
+ +S ++ DS C + N+ +D + TYS+L++ C GR
Sbjct: 235 KIEADVVIYSTVI---DSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 291
Query: 231 EKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTL 290
A +L+ ++E + P+ +++N L++A+ EG + +A + ++M +R + P+ VT+N+L
Sbjct: 292 SDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 351
Query: 291 INKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGM 350
IN FC +D+A++ M+ K P + TYN+LING+ + V E+ ++ ++G+
Sbjct: 352 INGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGL 411
Query: 351 KPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
N ++Y +LI+ + +A++V M S G
Sbjct: 412 VGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG 445
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 180/380 (47%), Gaps = 29/380 (7%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G P + L L + + +A+ MV G +PD+V+YG + + D
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
L+ MEK ++ V +Y+ V+ LCK R V DA LF EM ++ + P+ TY++LI
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
C G A L + M P+V+T+N L+ G++ +A ++ EM P
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP- 343
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
N+ TY++L+NGFC R+++A+++ +V
Sbjct: 344 ----------------------NIV------TYNSLINGFCMHDRLDEAQQIFTLMVSKD 375
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
+P ++YN L+N +C V ++ M RGL + VT+ TLI+ F + + D A+
Sbjct: 376 CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQ 435
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
K+M+ G+ P + TYN+L++G + K + E ++K M+P++ +Y + +
Sbjct: 436 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGM 495
Query: 365 CKDRKLLDAEIVLGDMASRG 384
CK K+ D + ++ +G
Sbjct: 496 CKAGKVEDGWDLFCSLSLKG 515
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 182/374 (48%), Gaps = 6/374 (1%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K + V + + ++L + + L +FT+M GIRPDV +Y +
Sbjct: 231 MEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 290
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L+ M + ++ P+V +N ++ K ++ +A KLFDEM+ R++ PN VTYN+
Sbjct: 291 WSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNS 350
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI+G+C +++A + M + + P V+TYN L+ G C + +V D E+ +M G
Sbjct: 351 LINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRG 410
Query: 181 FLPGGFSRIV----FDDDSACSNGNGSLRANVAARIDER--TYSALLNGFCRVGRIEKAK 234
+ + F S C N + V+ + TY+ LL+G C+ G++EKA
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
V L ++ + P +YNI+ C G VE + +G+KP + +NT+I+ F
Sbjct: 471 VVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGF 530
Query: 295 CETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNV 354
C+ G ++A KM E G P TYN+LI + R + E+++E+ +
Sbjct: 531 CKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDA 590
Query: 355 ISYGSLINCLCKDR 368
+YG + + L R
Sbjct: 591 STYGLVTDMLHDGR 604
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 186/369 (50%), Gaps = 12/369 (3%)
Query: 25 QFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYN 84
+ ++ + +F +MV+S P +V + K + A +K D ME V +++ YN
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 85 LVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAP 144
+++ LC+ ++ A + +M+ P+ VT N+L++G+C + +A +L +M
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 145 NAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG--GFSRIVFDDDSACSNGNG 202
+P +T+ L+ GL + ++A ++ M G P + ++ + C G
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI---NGLCKRGEP 221
Query: 203 SLRANVAARI-------DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNIL 255
L N+ ++ D YS +++ C+ ++ A + ++ G+ P +Y+ L
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 256 VNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGI 315
++ C+ G A + M ER + P+ VTFN+LI+ F + G++ +AE+ +M+++ I
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 316 APTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEI 375
P + TYNSLING+ + +I + K P+V++Y +LIN CK +K++D
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 376 VLGDMASRG 384
+ DM+ RG
Sbjct: 402 LFRDMSRRG 410
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 174/335 (51%), Gaps = 6/335 (1%)
Query: 55 AVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPN 114
A++ LD+ +L G M K R PS+ ++ +L + K+++ ++M + N
Sbjct: 40 ALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHN 99
Query: 115 TVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLV 174
TYN +I+ C+ ++ A ++ +M PS++T N LL G C R+++A ++
Sbjct: 100 LYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 159
Query: 175 EMEGNGFLPG--GFSRIV---FDDDSACSNGNGSLRANV-AARIDERTYSALLNGFCRVG 228
+M G+ P F+ +V F + A R V + D TY A++NG C+ G
Sbjct: 160 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 219
Query: 229 RIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFN 288
+ A +L K+ + + + Y+ ++++ C +V+ A+ +M+ +G++P T++
Sbjct: 220 EPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS 279
Query: 289 TLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKK 348
+LI+ C G A R + MLE+ I P + T+NSLI+ + + ++ ++ +E+ ++
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Query: 349 GMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
+ PN+++Y SLIN C +L +A+ + M S+
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 374
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 138/330 (41%), Gaps = 65/330 (19%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P+V + N L + + + +F +M++ I P++V+Y + M LD+ ++
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLV--------------- 112
M + P V YN ++ G CK ++V D +LF +M R LV
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427
Query: 113 --------------------PNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVIT 152
PN +TYNTL+DG CK G++EKA + ++ EP + T
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYT 487
Query: 153 YNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARI 212
YN + G+C +G+V D ++ + G P
Sbjct: 488 YNIMSEGMCKAGKVEDGWDLFCSLSLKGVKP----------------------------- 518
Query: 213 DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTA 272
D Y+ +++GFC+ G E+A + K+ E+G +P +YN L+ A+ +G + +
Sbjct: 519 DVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELI 578
Query: 273 EQMEERGLKPSYVTFNTLINKFCETGEVDQ 302
++M T+ L+ G +D+
Sbjct: 579 KEMRSCRFAGDASTYG-LVTDMLHDGRLDK 607
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 181 bits (460), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 202/386 (52%), Gaps = 12/386 (3%)
Query: 7 LPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFE 66
LP+V +RLF + +KQ++ VLA+ M GI ++ + + + L F
Sbjct: 85 LPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFS 144
Query: 67 LMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYC 126
MG + K P+ ++ ++ GLC RV +A +L D M+ P+ +T NTL++G C
Sbjct: 145 AMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLC 204
Query: 127 KVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGG- 185
G+ +A L +M +P+ +TY +L +C SG+ A E+L +ME
Sbjct: 205 LSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264
Query: 186 -FSRIVFDDDSACSNGNGSLRANVAARIDER-------TYSALLNGFCRVGRIEKAKEVL 237
+S I+ D C +G+ N+ ++ + TY+ L+ GFC GR + ++L
Sbjct: 265 KYSIII---DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Query: 238 AKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCET 297
+++ + P+ +++++L++++ EG + +A + ++M RG+ P +T+ +LI+ FC+
Sbjct: 322 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 381
Query: 298 GEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISY 357
+D+A + V M+ KG P + T+N LINGY + + E+ ++ +G+ + ++Y
Sbjct: 382 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 441
Query: 358 GSLINCLCKDRKLLDAEIVLGDMASR 383
+LI C+ KL A+ + +M SR
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSR 467
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 183/380 (48%), Gaps = 29/380 (7%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G P + ++N L L S + + + + MVE G +P+ V+YG +
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
EL+ ME+ + Y++++ GLCK + +A LF+EM + + N +TYN LI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
+C G + L M P+V+T++ L+ G++ +A E+ EM G P
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP- 366
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
D TY++L++GFC+ ++KA +++ +V G
Sbjct: 367 ----------------------------DTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
P+ ++NIL+N YC ++ ++ +M RG+ VT+NTLI FCE G+++ A+
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
++M+ + + P + TY L++G K EI E+IEK M+ ++ Y +I+ +
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518
Query: 365 CKDRKLLDAEIVLGDMASRG 384
C K+ DA + + +G
Sbjct: 519 CNASKVDDAWDLFCSLPLKG 538
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 172/366 (46%), Gaps = 12/366 (3%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G P+ + + + S Q + + M E I+ D V Y ++ LD
Sbjct: 223 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 282
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
F L ME + + ++ YN+++GG C R D KL +M+ R + PN VT++ LID
Sbjct: 283 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS 342
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
+ K G++ +A L M P ITY L+ G C ++ A +++ M G P
Sbjct: 343 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 402
Query: 185 ---------GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKE 235
G+ + DD SLR VA D TY+ L+ GFC +G++ AKE
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVA---DTVTYNTLIQGFCELGKLNVAKE 459
Query: 236 VLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFC 295
+ ++V V P+ ++Y IL++ C G EKA++ E++E+ ++ +N +I+ C
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 519
Query: 296 ETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVI 355
+VD A + KG+ P ++TYN +I G + + + ++E+ G P+
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGW 579
Query: 356 SYGSLI 361
+Y LI
Sbjct: 580 TYNILI 585
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 176/360 (48%), Gaps = 8/360 (2%)
Query: 16 LFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKER 75
+ + L + +F +M GI ++++Y + D G +L+ M K +
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 76 VGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAF 135
+ P+V +++++ K ++++A +L EM+HR + P+T+TY +LIDG+CK ++KA
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 136 SLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDS 195
+ M + +P++ T+N L+ G C + R++D E+ +M G + +
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ-G 447
Query: 196 ACSNGNGSLRANVAARIDER-------TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPS 248
C G ++ + + R TY LL+G C G EKA E+ K+ ++ +
Sbjct: 448 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507
Query: 249 QISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVK 308
YNI+++ C+ V+ A + +G+KP T+N +I C+ G + +AE +
Sbjct: 508 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR 567
Query: 309 KMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDR 368
KM E G AP TYN LI + + K +++EE+++ G + + +I+ L R
Sbjct: 568 KMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGR 627
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 155/327 (47%), Gaps = 29/327 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K + P+V + + L ++ V + + + +M+ GI PD ++Y ++
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 383
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
LDK +++ M + P++ +N+++ G CK R+ D +LF +M R +V +TVTYNT
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI G+C++G++ A L M + P+++TY LL GLC +G A E+ ++E +
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
+D Y+ +++G C +++ A ++ L
Sbjct: 504 M-----------------------------ELDIGIYNIIIHGMCNASKVDDAWDLFCSL 534
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
GV P +YNI++ C +G + +A +MEE G P T+N LI G+
Sbjct: 535 PLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDA 594
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLIN 327
++ + ++++ G + T +I+
Sbjct: 595 TKSVKLIEELKRCGFSVDASTIKMVID 621
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 182/380 (47%), Gaps = 41/380 (10%)
Query: 46 VSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDE 105
+SY + + + ++ D +L M R P+V ++ + + K ++ L +
Sbjct: 54 LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 113
Query: 106 MLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGR 165
M + + N T + +I+ +C+ ++ AFS ++ EP+ IT++ L+ GLC GR
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 166 VNDAREVLVEMEGNGFLPGGFS-----------------RIVFDD--------------- 193
V++A E++ M G P + ++ D
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233
Query: 194 --DSACSNGNGSLRANVAARIDERT-------YSALLNGFCRVGRIEKAKEVLAKLVENG 244
+ C +G +L + +++ER YS +++G C+ G ++ A + ++ G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
+ + I+YNIL+ +C+ G + + M +R + P+ VTF+ LI+ F + G++ +AE
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
K+M+ +GIAP TY SLI+G+ + ++ K ++++ + KG PN+ ++ LIN
Sbjct: 354 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 413
Query: 365 CKDRKLLDAEIVLGDMASRG 384
CK ++ D + M+ RG
Sbjct: 414 CKANRIDDGLELFRKMSLRG 433
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 182/374 (48%), Gaps = 29/374 (7%)
Query: 7 LPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFE 66
LPS+ RL +++E V+ M GI D+ S+ + L
Sbjct: 68 LPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALS 127
Query: 67 LMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYC 126
++G M K PS+ + +L G C V R+ DA L M+ PN V YNTLIDG C
Sbjct: 128 VLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLC 187
Query: 127 KVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGF 186
K GE+ A L M+ V+TYN LL GLC SGR +DA +L +M P
Sbjct: 188 KNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP--- 244
Query: 187 SRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVV 246
D T++AL++ F + G +++A+E+ +++++ V
Sbjct: 245 --------------------------DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD 278
Query: 247 PSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERW 306
P+ ++YN ++N C G + A +T + M +G P+ VT+NTLI+ FC+ VD+ +
Sbjct: 279 PNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKL 338
Query: 307 VKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCK 366
++M +G + TYN+LI+GY ++ +I + + + P++I++ L++ LC
Sbjct: 339 FQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCV 398
Query: 367 DRKLLDAEIVLGDM 380
+ ++ A + DM
Sbjct: 399 NGEIESALVKFDDM 412
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 177/364 (48%), Gaps = 29/364 (7%)
Query: 20 LVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPS 79
+ S +FE A+F +MV S P +V + + + A L+ + ME +
Sbjct: 46 FLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHD 105
Query: 80 VFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKA 139
++ + +++ C+ R+ A + +M+ P+ VT+ +L+ G+C V + AFSL
Sbjct: 106 LYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI 165
Query: 140 RMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSN 199
M EP+V+ YN L+ GLC +G +N A E+L EME G
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKG------------------- 206
Query: 200 GNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAY 259
L A+V TY+ LL G C GR A +L +++ + P +++ L++ +
Sbjct: 207 ----LGADVV------TYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVF 256
Query: 260 CHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTL 319
+G +++A + ++M + + P+ VT+N++IN C G + A++ M KG P +
Sbjct: 257 VKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNV 316
Query: 320 ETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGD 379
TYN+LI+G+ + + ++ + + +G ++ +Y +LI+ C+ KL A +
Sbjct: 317 VTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCW 376
Query: 380 MASR 383
M SR
Sbjct: 377 MVSR 380
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 177/384 (46%), Gaps = 29/384 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K G PS+ + L + ++ MV+SG P+VV Y ++ +
Sbjct: 132 MMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGE 191
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L+ EL+ MEK+ +G V YN +L GLC R DA ++ +M+ R++ P+ VT+
Sbjct: 192 LNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTA 251
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LID + K G +++A L M + +P+ +TYN ++ GLC GR+ DA++ M G
Sbjct: 252 LIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKG 311
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P NV TY+ L++GFC+ +++ ++ ++
Sbjct: 312 CFP-----------------------NVV------TYNTLISGFCKFRMVDEGMKLFQRM 342
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
G +YN L++ YC G + A+ M R + P +T L++ C GE+
Sbjct: 343 SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEI 402
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
+ A M E + YN +I+G + K +E+ + +G+KP+ +Y +
Sbjct: 403 ESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIM 462
Query: 361 INCLCKDRKLLDAEIVLGDMASRG 384
I LCK+ +A+ ++ M G
Sbjct: 463 ILGLCKNGPRREADELIRRMKEEG 486
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 143/315 (45%), Gaps = 29/315 (9%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K G+ V + N L L S ++ + DM++ I PDVV++ ++ V +
Sbjct: 202 MEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGN 261
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
LD+ EL M + V P+ YN ++ GLC R+ DA+K FD M + PN VTYNT
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNT 321
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI G+CK +++ L RM + TYN L+ G C G++ A ++ M
Sbjct: 322 LISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR 381
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P D T+ LL+G C G IE A +
Sbjct: 382 VTP-----------------------------DIITHCILLHGLCVNGEIESALVKFDDM 412
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
E+ ++YNI+++ C VEKA + ++ G+KP T+ +I C+ G
Sbjct: 413 RESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPR 472
Query: 301 DQAERWVKKMLEKGI 315
+A+ +++M E+GI
Sbjct: 473 READELIRRMKEEGI 487
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 170/369 (46%), Gaps = 35/369 (9%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G+ + S L + L+V M++ G P +V++G + ++ +
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
F L+ M K P+V VYN ++ GLCK + A +L +EM + L + VTYNTL+ G
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
C G A + M + P V+T+ L+ G +++A+E+ EM + P
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
NV TY++++NG C GR+ AK+ + G
Sbjct: 281 ----------------------NV-------TYNSIINGLCMHGRLYDAKKTFDLMASKG 311
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
P+ ++YN L++ +C V++ ++ ++M G T+NTLI+ +C+ G++ A
Sbjct: 312 CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVAL 371
Query: 305 RWVKKMLEKGIAPTLETYNSLINGY---GRISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
M+ + + P + T+ L++G G I + + F+ + E EK +++Y +I
Sbjct: 372 DIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEK---YIGIVAYNIMI 428
Query: 362 NCLCKDRKL 370
+ LCK K+
Sbjct: 429 HGLCKADKV 437
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G P+V + N L + ++ + +F M G D+ +Y + +
Sbjct: 307 MASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGK 366
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L ++ M RV P + + ++L GLC ++ A FD+M V YN
Sbjct: 367 LRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNI 426
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+I G CK ++EKA+ L R+ +P TY ++ GLC +G +A E++ M+ G
Sbjct: 427 MIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486
Query: 181 FL 182
+
Sbjct: 487 II 488
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 90/181 (49%)
Query: 204 LRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEG 263
L AAR L GF R E A + ++V + +PS + + L+ A +
Sbjct: 26 LGGGAAARAFSDYREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLR 85
Query: 264 YVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYN 323
E I +++ME G+ +F LI+ FC + A + KM++ G P++ T+
Sbjct: 86 RYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFG 145
Query: 324 SLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
SL++G+ ++ F ++ + K G +PNV+ Y +LI+ LCK+ +L A +L +M +
Sbjct: 146 SLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKK 205
Query: 384 G 384
G
Sbjct: 206 G 206
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 197/393 (50%), Gaps = 12/393 (3%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M ++G P V + N + + S L + M E ++ DV +Y +++
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D L ME + + SV YN ++ GLCK + D L +M+ R +VPN +T+N
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L+D + K G++++A L M P++ITYN L+ G C R+++A +L M N
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Query: 181 FLPG---------GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIE 231
P G+ + DD N S R VA + TYS L+ GFC+ G+I+
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV---TYSILVQGFCQSGKIK 420
Query: 232 KAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLI 291
A+E+ ++V +GV+P ++Y IL++ C G +EKA++ E +++ + V + T+I
Sbjct: 421 LAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTII 480
Query: 292 NKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMK 351
C+ G+V+ A + KG+ P + TY +I+G + + + +L ++E+ G
Sbjct: 481 EGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA 540
Query: 352 PNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
PN +Y +LI +D L + ++ +M S G
Sbjct: 541 PNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 177/382 (46%), Gaps = 29/382 (7%)
Query: 3 KDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLD 62
K G P + N L + L + + + + MVE+G +PDVV+Y V D
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 63 KGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLI 122
+L+ ME+ V VF Y+ ++ LC+ + A LF EM + + + VTYN+L+
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 123 DGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFL 182
G CK G+ L M + P+VIT+N LL G++ +A E+ EM G
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 183 PGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVE 242
P TY+ L++G+C R+ +A +L +V
Sbjct: 331 PNII-----------------------------TYNTLMDGYCMQNRLSEANNMLDLMVR 361
Query: 243 NGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQ 302
N P +++ L+ YC V+ ++ + +RGL + VT++ L+ FC++G++
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL 421
Query: 303 AERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLIN 362
AE ++M+ G+ P + TY L++G K EI E+++K M ++ Y ++I
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 363 CLCKDRKLLDAEIVLGDMASRG 384
+CK K+ DA + + +G
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKG 503
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 190/379 (50%), Gaps = 13/379 (3%)
Query: 15 RLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKE 74
RL +V K+ + +A+F +M+ S P +V + + A K + + +E
Sbjct: 59 RLRSGIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELN 117
Query: 75 RVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKA 134
+ +++ N+++ C+ + A + +++ P+T T+NTLI G G++ +A
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 135 FSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGF--SRIVFD 192
L RM +P V+TYN ++ G+C SG + A ++L +ME F S I+
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTII-- 235
Query: 193 DDSACSNGNGSLRANVAARIDER-------TYSALLNGFCRVGRIEKAKEVLAKLVENGV 245
DS C +G ++ ++ + TY++L+ G C+ G+ +L +V +
Sbjct: 236 -DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Query: 246 VPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAER 305
VP+ I++N+L++ + EG +++A + ++M RG+ P+ +T+NTL++ +C + +A
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354
Query: 306 WVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLC 365
+ M+ +P + T+ SLI GY + ++ I K+G+ N ++Y L+ C
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 366 KDRKLLDAEIVLGDMASRG 384
+ K+ AE + +M S G
Sbjct: 415 QSGKIKLAEELFQEMVSHG 433
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 177/371 (47%), Gaps = 8/371 (2%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + V V + + + ++L + +++F +M GI+ VV+Y V
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ G L+ M + P+V +N++L K ++++A +L+ EM+ R + PN +TYNT
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L+DGYC + +A ++ M P ++T+ L+ G C RV+D +V + G
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARI-------DERTYSALLNGFCRVGRIEKA 233
+ + + C +G L + + D TY LL+G C G++EKA
Sbjct: 399 LVANAVTYSILVQ-GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 457
Query: 234 KEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINK 293
E+ L ++ + + Y ++ C G VE A + +G+KP+ +T+ +I+
Sbjct: 458 LEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG 517
Query: 294 FCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPN 353
C+ G + +A ++KM E G AP TYN+LI + R + +++EE++ G +
Sbjct: 518 LCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577
Query: 354 VISYGSLINCL 364
S +I+ L
Sbjct: 578 ASSIKMVIDML 588
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 189/381 (49%), Gaps = 31/381 (8%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G P++RS N L V +KQ+ KV ++F +G+ P++ +Y ++ + K+ +K
Sbjct: 109 GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
+ M KE P VF Y+ V+ L K ++ DA +LFDEM R + P+ YN LIDG
Sbjct: 169 RGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDG 228
Query: 125 YCKVGEMEKAFSLKAR-MKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP 183
+ K + + A L R ++ + P+V T+N ++ GL GRV+D ++ M+ N
Sbjct: 229 FLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQN---- 284
Query: 184 GGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVEN 243
D TYS+L++G C G ++KA+ V +L E
Sbjct: 285 -------------------------EREKDLYTYSSLIHGLCDAGNVDKAESVFNELDER 319
Query: 244 GVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQA 303
++YN ++ +C G ++++++ ME + + V++N LI E G++D+A
Sbjct: 320 KASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEA 378
Query: 304 ERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINC 363
+ M KG A TY I+G K +++E+E G +V +Y S+I+C
Sbjct: 379 TMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDC 438
Query: 364 LCKDRKLLDAEIVLGDMASRG 384
LCK ++L +A ++ +M+ G
Sbjct: 439 LCKKKRLEEASNLVKEMSKHG 459
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 199/424 (46%), Gaps = 41/424 (9%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K+G P V S + + L + + + L +F +M E G+ PDV Y ++ + KD
Sbjct: 175 MWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKD 234
Query: 61 LDKGFELMG-CMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYN 119
EL +E V P+V +N+++ GL K RV D K+++ M + TY+
Sbjct: 235 HKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYS 294
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEG- 178
+LI G C G ++KA S+ + A V+TYN +LGG C G++ ++ E+ ME
Sbjct: 295 SLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHK 354
Query: 179 ------------NGFLPGG-------FSRIV----FDDDSA---------CSNG--NGSL 204
G L G R++ + D C NG N +L
Sbjct: 355 NSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKAL 414
Query: 205 RA-----NVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAY 259
+ +D Y+++++ C+ R+E+A ++ ++ ++GV + N L+
Sbjct: 415 GVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGL 474
Query: 260 CHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTL 319
+ + +A +M + G +P+ V++N LI C+ G+ +A +VK+MLE G P L
Sbjct: 475 IRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDL 534
Query: 320 ETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGD 379
+TY+ L+ G R E+ + + G++ +V+ + LI+ LC KL DA V+ +
Sbjct: 535 KTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMAN 594
Query: 380 MASR 383
M R
Sbjct: 595 MEHR 598
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 188/430 (43%), Gaps = 52/430 (12%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
+ V P+V++ N + L + + L ++ M ++ D+ +Y + +
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGN 305
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+DK + +++ + V YN +LGG C+ ++K++ +L+ M H+N V N V+YN
Sbjct: 306 VDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNI 364
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI G + G++++A + M A TY + GLC +G VN A V+ E+E +G
Sbjct: 365 LIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSG 424
Query: 181 --------------------------------------------FLPGGFSRIVFDDDSA 196
L GG R DS
Sbjct: 425 GHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIR-----DSR 479
Query: 197 CSNGNGSLR--ANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNI 254
+ LR R +Y+ L+ G C+ G+ +A + +++ENG P +Y+I
Sbjct: 480 LGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSI 539
Query: 255 LVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKG 314
L+ C + ++ A++ Q + GL+ + N LI+ C G++D A + M +
Sbjct: 540 LLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRN 599
Query: 315 IAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAE 374
L TYN+L+ G+ ++ + + I + K G++P++ISY +++ LC R + A
Sbjct: 600 CTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAM 659
Query: 375 IVLGDMASRG 384
D + G
Sbjct: 660 EFFDDARNHG 669
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 159/353 (45%), Gaps = 29/353 (8%)
Query: 9 SVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELM 68
++ S N L + L+ + + ++ ++ M G D +YG + + ++K +M
Sbjct: 358 NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVM 417
Query: 69 GCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKV 128
+E V+ Y ++ LCK +R+++A L EM + N+ N LI G +
Sbjct: 418 QEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD 477
Query: 129 GEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSR 188
+ +A M P+V++YN L+ GLC +G+ +A + EM NG+ P
Sbjct: 478 SRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKP----- 532
Query: 189 IVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPS 248
D +TYS LL G CR +I+ A E+ + +++G+
Sbjct: 533 ------------------------DLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETD 568
Query: 249 QISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVK 308
+ +NIL++ C G ++ A+ ME R + VT+NTL+ F + G+ ++A
Sbjct: 569 VMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWG 628
Query: 309 KMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
M + G+ P + +YN+++ G E ++ G+ P V ++ L+
Sbjct: 629 YMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 97/187 (51%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K+G P+V S N L L + +F + A +M+E+G +PD+ +Y + +
Sbjct: 490 MGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRK 549
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D EL + + V ++N+++ GLC V ++ DA + M HRN N VTYNT
Sbjct: 550 IDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNT 609
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L++G+ KVG+ +A + M +P +I+YN ++ GLC V+ A E + +G
Sbjct: 610 LMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHG 669
Query: 181 FLPGGFS 187
P ++
Sbjct: 670 IFPTVYT 676
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 53/120 (44%)
Query: 3 KDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLD 62
+ G+ V N L L + + + V +M ++V+Y +E + D +
Sbjct: 562 QSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSN 621
Query: 63 KGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLI 122
+ + G M K + P + YN ++ GLC R V A + FD+ + + P T+N L+
Sbjct: 622 RATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 186/378 (49%), Gaps = 34/378 (8%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P+ +S N + E LV + VF DM+ I P + ++G ++A + ++D L
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
+ M K P+ +Y ++ L K RV +A +L +EM VP+ T+N +I G CK
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
+ +A + RM P ITY L+ GLC GRV+ A+++ F
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL-------------FY 346
Query: 188 RIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVEN-GVV 246
RI + + ++ L++GF GR++ AK VL+ +V + G+V
Sbjct: 347 RI--------------------PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV 386
Query: 247 PSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERW 306
P +YN L+ Y EG V A++ M +G KP+ ++ L++ FC+ G++D+A
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 307 VKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCK 366
+ +M G+ P +N LI+ + + + EI E+ +KG KP+V ++ SLI+ LC+
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 367 DRKLLDAEIVLGDMASRG 384
++ A +L DM S G
Sbjct: 507 VDEIKHALWLLRDMISEG 524
Score = 174 bits (442), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 183/373 (49%), Gaps = 30/373 (8%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVES-GIRPDVVSYGKAVEAAVMLKDLDKGFE 66
P + N L V + + AV +DMV S GI PDV +Y + + E
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALE 410
Query: 67 LMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYC 126
++ M + P+V+ Y +++ G CK+ ++ +A + +EM L PNTV +N LI +C
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470
Query: 127 KVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGF 186
K + +A + M +P V T+N L+ GLC + A +L +M G +
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV---- 526
Query: 187 SRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVV 246
AN TY+ L+N F R G I++A++++ ++V G
Sbjct: 527 -------------------ANTV------TYNTLINAFLRRGEIKEARKLVNEMVFQGSP 561
Query: 247 PSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERW 306
+I+YN L+ C G V+KA E+M G PS ++ N LIN C +G V++A +
Sbjct: 562 LDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEF 621
Query: 307 VKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCK 366
K+M+ +G P + T+NSLING R + +++ +G+ P+ +++ +L++ LCK
Sbjct: 622 QKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCK 681
Query: 367 DRKLLDAEIVLGD 379
+ DA ++L +
Sbjct: 682 GGFVYDACLLLDE 694
Score = 167 bits (424), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 192/387 (49%), Gaps = 11/387 (2%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G +P + N + L + + + M+ G PD ++YG + + +D
Sbjct: 282 GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA 341
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEML-HRNLVPNTVTYNTLID 123
+L + K P + ++N ++ G R+ DA+ + +M+ +VP+ TYN+LI
Sbjct: 342 KDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 397
Query: 124 GYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP 183
GY K G + A + M+ +P+V +Y L+ G C G++++A VL EM +G P
Sbjct: 398 GYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP 457
Query: 184 G--GFSRIV--FDDDSACSNGNGSLR--ANVAARIDERTYSALLNGFCRVGRIEKAKEVL 237
GF+ ++ F + R + D T+++L++G C V I+ A +L
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517
Query: 238 AKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCET 297
++ GVV + ++YN L+NA+ G +++A + +M +G +T+N+LI C
Sbjct: 518 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA 577
Query: 298 GEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISY 357
GEVD+A +KML G AP+ + N LING R + E +E+ +G P+++++
Sbjct: 578 GEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTF 637
Query: 358 GSLINCLCKDRKLLDAEIVLGDMASRG 384
SLIN LC+ ++ D + + + G
Sbjct: 638 NSLINGLCRAGRIEDGLTMFRKLQAEG 664
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 158/327 (48%), Gaps = 29/327 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
MR G P+V S L + + ++ V +M G++P+ V + + A
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ + E+ M ++ P V+ +N ++ GLC+V +K A L +M+ +V NTVTYNT
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI+ + + GE+++A L M + ITYN L+ GLC +G V+ AR + +M +G
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P +N++ I L+NG CR G +E+A E ++
Sbjct: 595 HAP----------------------SNISCNI-------LINGLCRSGMVEEAVEFQKEM 625
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
V G P +++N L+N C G +E + +++ G+ P VTFNTL++ C+ G V
Sbjct: 626 VLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFV 685
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLIN 327
A + + +E G P T++ L+
Sbjct: 686 YDACLLLDEGIEDGFVPNHRTWSILLQ 712
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 130/267 (48%), Gaps = 12/267 (4%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M DG+ P+ N L + + + +F +M G +PDV ++ + + +
Sbjct: 450 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 509
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ L+ M E V + YN ++ + +K+ARKL +EM+ + + +TYN+
Sbjct: 510 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNS 569
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI G C+ GE++KA SL +M PS I+ N L+ GLC SG V +A E EM G
Sbjct: 570 LIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629
Query: 181 FLPG--GFSRIVFDDDSAC-----SNGNGSLRANVAARI--DERTYSALLNGFCRVGRIE 231
P F+ ++ + C +G R A I D T++ L++ C+ G +
Sbjct: 630 STPDIVTFNSLI---NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVY 686
Query: 232 KAKEVLAKLVENGVVPSQISYNILVNA 258
A +L + +E+G VP+ +++IL+ +
Sbjct: 687 DACLLLDEGIEDGFVPNHRTWSILLQS 713
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 185/381 (48%), Gaps = 55/381 (14%)
Query: 36 MVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKER------VGPSVFVYNLVLGG 89
M E IRPDVV+ G + + +D+ E+ M +R + +N ++ G
Sbjct: 320 MDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDG 379
Query: 90 LCKVRRVKDARKLFDEM-LHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEP 148
LCKV R+K+A +L M L VPN VTYN LIDGYC+ G++E A + +RMK +P
Sbjct: 380 LCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKP 439
Query: 149 SVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGN------- 201
+V+T N ++GG+C +N A ++ME G + G + + CS N
Sbjct: 440 NVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG-VKGNVVTYMTLIHACCSVSNVEKAMYW 498
Query: 202 --GSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAY 259
L A + D + Y AL++G C+V R A V+ KL E G ++YN+L+ +
Sbjct: 499 YEKMLEAGCSP--DAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLF 556
Query: 260 CHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTL 319
C + EK + ME+ G KP +T+NTLI+ F + + + ER +++M E G+ PT+
Sbjct: 557 CDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTV 616
Query: 320 ET------------------------------------YNSLINGYGRISNFVKCFEILE 343
T YN LIN + ++ NF + + E
Sbjct: 617 TTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKE 676
Query: 344 EIEKKGMKPNVISYGSLINCL 364
E++ K ++PNV +Y +L CL
Sbjct: 677 EMKMKMVRPNVETYNALFKCL 697
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 180/399 (45%), Gaps = 49/399 (12%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQF---EKVLAVFTDMVESGIRPDVVSYGKAVEAAVM 57
++K+ V P R + V ++ EK++A+ + G+ P+ V + + +
Sbjct: 212 LQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCK 271
Query: 58 LKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVT 117
+ ++++ + K + +N +L L + + L +M + P+ VT
Sbjct: 272 NARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVT 331
Query: 118 YNTLIDGYCKVGEMEKAFSLKARMKAPNAE------PSVITYNCLLGGLCSSGRVNDARE 171
LI+ CK +++A + +M+ + I +N L+ GLC GR+ +A E
Sbjct: 332 LGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEE 391
Query: 172 VLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDER------TYSALLNGFC 225
+LV M +++ER TY+ L++G+C
Sbjct: 392 LLVRM----------------------------------KLEERCVPNAVTYNCLIDGYC 417
Query: 226 RVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYV 285
R G++E AKEV++++ E+ + P+ ++ N +V C + A+ ME+ G+K + V
Sbjct: 418 RAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVV 477
Query: 286 TFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEI 345
T+ TLI+ C V++A W +KMLE G +P + Y +LI+G ++ ++E++
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKL 537
Query: 346 EKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
++ G ++++Y LI C +L DM G
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEG 576
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 139/320 (43%), Gaps = 30/320 (9%)
Query: 7 LPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFE 66
+P+ + N L + + + E V + M E I+P+VV+ V L+
Sbjct: 403 VPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 67 LMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYC 126
MEKE V +V Y ++ C V V+ A +++ML P+ Y LI G C
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC 522
Query: 127 KVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGF 186
+V A + ++K ++ YN L+G C E+L +ME G P
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKP--- 579
Query: 187 SRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVV 246
D TY+ L++ F + E + ++ ++ E+G+
Sbjct: 580 --------------------------DSITYNTLISFFGKHKDFESVERMMEQMREDGLD 613
Query: 247 PSQISYNILVNAYCHEGYVEKAIQTAEQM-EERGLKPSYVTFNTLINKFCETGEVDQAER 305
P+ +Y +++AYC G +++A++ + M + P+ V +N LIN F + G QA
Sbjct: 614 PTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALS 673
Query: 306 WVKKMLEKGIAPTLETYNSL 325
++M K + P +ETYN+L
Sbjct: 674 LKEEMKMKMVRPNVETYNAL 693
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 159/344 (46%), Gaps = 52/344 (15%)
Query: 82 VYNLVLGGLCKVRRVKDARKLFDEMLHRNLV--PNTVTYNTLIDGYCK--VGEMEKAFSL 137
V N+V+ L + V DA K+ DEML + V PN +T + ++ K + EK +L
Sbjct: 187 VRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIAL 246
Query: 138 KARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEG----------NGFLP--GG 185
+R + P+ + + LC + R N A ++L ++ N L G
Sbjct: 247 ISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGR 306
Query: 186 FSRIVFDDDSACSNGNGSLRANVAA------------RIDE-----------RT------ 216
I +D +R +V R+DE RT
Sbjct: 307 NMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVI 366
Query: 217 ------YSALLNGFCRVGRIEKAKEVLAKL-VENGVVPSQISYNILVNAYCHEGYVEKAI 269
++ L++G C+VGR+++A+E+L ++ +E VP+ ++YN L++ YC G +E A
Sbjct: 367 KADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAK 426
Query: 270 QTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGY 329
+ +M+E +KP+ VT NT++ C ++ A + M ++G+ + TY +LI+
Sbjct: 427 EVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHAC 486
Query: 330 GRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDA 373
+SN K E++ + G P+ Y +LI+ LC+ R+ DA
Sbjct: 487 CSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA 530
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 140/313 (44%), Gaps = 30/313 (9%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M++D + P+V +VN + + + F DM + G++ +VV+Y + A + +
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
++K M + P +Y ++ GLC+VRR DA ++ +++ + + YN
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI +C EK + + M+ +P ITYN L+ ++ +M +G
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P TY A+++ +C VG +++A ++ +
Sbjct: 612 LDPTV-----------------------------TTYGAVIDAYCSVGELDEALKLFKDM 642
Query: 241 -VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGE 299
+ + V P+ + YNIL+NA+ G +A+ E+M+ + ++P+ T+N L E +
Sbjct: 643 GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQ 702
Query: 300 VDQAERWVKKMLE 312
+ + + +M+E
Sbjct: 703 GETLLKLMDEMVE 715
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 185/381 (48%), Gaps = 55/381 (14%)
Query: 36 MVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKER------VGPSVFVYNLVLGG 89
M E IRPDVV+ G + + +D+ E+ M +R + +N ++ G
Sbjct: 320 MDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDG 379
Query: 90 LCKVRRVKDARKLFDEM-LHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEP 148
LCKV R+K+A +L M L VPN VTYN LIDGYC+ G++E A + +RMK +P
Sbjct: 380 LCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKP 439
Query: 149 SVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGN------- 201
+V+T N ++GG+C +N A ++ME G + G + + CS N
Sbjct: 440 NVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG-VKGNVVTYMTLIHACCSVSNVEKAMYW 498
Query: 202 --GSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAY 259
L A + D + Y AL++G C+V R A V+ KL E G ++YN+L+ +
Sbjct: 499 YEKMLEAGCSP--DAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLF 556
Query: 260 CHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTL 319
C + EK + ME+ G KP +T+NTLI+ F + + + ER +++M E G+ PT+
Sbjct: 557 CDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTV 616
Query: 320 ET------------------------------------YNSLINGYGRISNFVKCFEILE 343
T YN LIN + ++ NF + + E
Sbjct: 617 TTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKE 676
Query: 344 EIEKKGMKPNVISYGSLINCL 364
E++ K ++PNV +Y +L CL
Sbjct: 677 EMKMKMVRPNVETYNALFKCL 697
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 180/399 (45%), Gaps = 49/399 (12%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQF---EKVLAVFTDMVESGIRPDVVSYGKAVEAAVM 57
++K+ V P R + V ++ EK++A+ + G+ P+ V + + +
Sbjct: 212 LQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCK 271
Query: 58 LKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVT 117
+ ++++ + K + +N +L L + + L +M + P+ VT
Sbjct: 272 NARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVT 331
Query: 118 YNTLIDGYCKVGEMEKAFSLKARMKAPNAE------PSVITYNCLLGGLCSSGRVNDARE 171
LI+ CK +++A + +M+ + I +N L+ GLC GR+ +A E
Sbjct: 332 LGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEE 391
Query: 172 VLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDER------TYSALLNGFC 225
+LV M +++ER TY+ L++G+C
Sbjct: 392 LLVRM----------------------------------KLEERCVPNAVTYNCLIDGYC 417
Query: 226 RVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYV 285
R G++E AKEV++++ E+ + P+ ++ N +V C + A+ ME+ G+K + V
Sbjct: 418 RAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVV 477
Query: 286 TFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEI 345
T+ TLI+ C V++A W +KMLE G +P + Y +LI+G ++ ++E++
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKL 537
Query: 346 EKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
++ G ++++Y LI C +L DM G
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEG 576
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 156/359 (43%), Gaps = 30/359 (8%)
Query: 7 LPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFE 66
+P+ + N L + + + E V + M E I+P+VV+ V L+
Sbjct: 403 VPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 67 LMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYC 126
MEKE V +V Y ++ C V V+ A +++ML P+ Y LI G C
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC 522
Query: 127 KVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGF 186
+V A + ++K ++ YN L+G C E+L +ME G P
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKP--- 579
Query: 187 SRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVV 246
D TY+ L++ F + E + ++ ++ E+G+
Sbjct: 580 --------------------------DSITYNTLISFFGKHKDFESVERMMEQMREDGLD 613
Query: 247 PSQISYNILVNAYCHEGYVEKAIQTAEQM-EERGLKPSYVTFNTLINKFCETGEVDQAER 305
P+ +Y +++AYC G +++A++ + M + P+ V +N LIN F + G QA
Sbjct: 614 PTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALS 673
Query: 306 WVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
++M K + P +ETYN+L + ++++E+ ++ +PN I+ L+ L
Sbjct: 674 LKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 157/354 (44%), Gaps = 36/354 (10%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M++D + P+V +VN + + + F DM + G++ +VV+Y + A + +
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
++K M + P +Y ++ GLC+VRR DA ++ +++ + + YN
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI +C EK + + M+ +P ITYN L+ ++ +M +G
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P TY A+++ +C VG +++A ++ +
Sbjct: 612 LDPTV-----------------------------TTYGAVIDAYCSVGELDEALKLFKDM 642
Query: 241 -VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGE 299
+ + V P+ + YNIL+NA+ G +A+ E+M+ + ++P+ T+N L E +
Sbjct: 643 GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQ 702
Query: 300 VDQAERWVKKMLEKGIAP---TLETYNSLINGYG---RISNFVKCFEILEEIEK 347
+ + + +M+E+ P T+E ++G ++ F++ + + EK
Sbjct: 703 GETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQGYSVASPTEK 756
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 180/415 (43%), Gaps = 64/415 (15%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G P + L L + + +A+ MV+ G +P++V+YG V D+D
Sbjct: 110 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 169
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
F L+ ME ++ V ++N ++ LCK R V DA LF EM + + PN VTY++LI
Sbjct: 170 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
C G A L + M P+++T+N L+ G+ +A ++ +M P
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
F TY++L+NGFC R++KAK++ +V
Sbjct: 290 IF-----------------------------TYNSLINGFCMHDRLDKAKQMFEFMVSKD 320
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
P +YN L+ +C VE + +M RGL VT+ TLI G+ D A+
Sbjct: 321 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 380
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEK----------------- 347
+ K+M+ G+ P + TY+ L++G K E+ + ++K
Sbjct: 381 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 440
Query: 348 ------------------KGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
KG+KPNV++Y ++I+ LC R L +A +L M G
Sbjct: 441 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 196/393 (49%), Gaps = 12/393 (3%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K LPS+ N+L + K+F+ V+++ M GI ++ +Y +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ L+G M K PS+ + +L G C +R+ DA L D+M+ P+T+T+ T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI G + +A +L RM +P+++TY ++ GLC G ++ A +L +ME
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 181 FLPGG--FSRIVFDDDSACSNGNGSLRANVAARIDER-------TYSALLNGFCRVGRIE 231
F+ I+ DS C + N+ ++ + TYS+L++ C GR
Sbjct: 181 IEADVVIFNTII---DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 237
Query: 232 KAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLI 291
A ++L+ ++E + P+ +++N L++A+ EG +A + + M +R + P T+N+LI
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Query: 292 NKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMK 351
N FC +D+A++ + M+ K P L+TYN+LI G+ + E+ E+ +G+
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Query: 352 PNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ ++Y +LI L D +A+ V M S G
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 180/364 (49%), Gaps = 30/364 (8%)
Query: 14 NRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEK 73
N + ++L + + L +F +M GIRP+VV+Y + +L+ M +
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248
Query: 74 ERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEK 133
+++ P++ +N ++ K + +A KL D+M+ R++ P+ TYN+LI+G+C ++K
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308
Query: 134 AFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDD 193
A + M + + P + TYN L+ G C S RV D E+ EM G +
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG---------- 358
Query: 194 DSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYN 253
D TY+ L+ G G + A++V ++V +GV P ++Y+
Sbjct: 359 -------------------DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 399
Query: 254 ILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK 313
IL++ C+ G +EKA++ + M++ +K + T+I C+ G+VD + K
Sbjct: 400 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 459
Query: 314 GIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKD-RKLLD 372
G+ P + TYN++I+G + + +L+++++ G P+ +Y +LI +D K
Sbjct: 460 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAAS 519
Query: 373 AEIV 376
AE++
Sbjct: 520 AELI 523
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 147/303 (48%), Gaps = 29/303 (9%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P++ + N L + V +F + + DM++ I PD+ +Y + M LDK ++
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
M + P + YN ++ G CK +RV+D +LF EM HR LV +TVTY TLI G
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
G+ + A + +M + P ++TY+ LL GLC++G++ A EV M+ +
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS-------- 424
Query: 188 RIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVP 247
++D Y+ ++ G C+ G+++ ++ L GV P
Sbjct: 425 ---------------------EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 463
Query: 248 SQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWV 307
+ ++YN +++ C + +++A ++M+E G P T+NTLI G+ + +
Sbjct: 464 NVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELI 523
Query: 308 KKM 310
++M
Sbjct: 524 REM 526
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G++ + L + L + VF MV G+ PD+++Y ++
Sbjct: 351 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 410
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L+K E+ M+K + +++Y ++ G+CK +V D LF + + + PN VTYNT
Sbjct: 411 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 470
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+I G C +++A++L +MK P TYN L+ G + E++ EM
Sbjct: 471 MISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 530
Query: 181 FL 182
F+
Sbjct: 531 FV 532
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 177 bits (450), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 204/427 (47%), Gaps = 45/427 (10%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M +G PS+++ + L L + + V+ + +M G++P+V ++ +
Sbjct: 214 MILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGK 273
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEML------------- 107
+++ +E++ M+ E GP V Y +++ LC R++ A+++F++M
Sbjct: 274 INEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYIT 333
Query: 108 -------HRNL---------------VPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPN 145
+R+L VP+ VT+ L+D CK G +AF M+
Sbjct: 334 LLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQG 393
Query: 146 AEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVF--------DDDSAC 197
P++ TYN L+ GL R++DA E+ ME G P ++ IVF D SA
Sbjct: 394 ILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSAL 453
Query: 198 SNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVN 257
+A I +A L + GR +AK++ L + G+VP ++YN+++
Sbjct: 454 ETFEKMKTKGIAPNI--VACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMK 511
Query: 258 AYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAP 317
Y G +++AI+ +M E G +P + N+LIN + VD+A + +M E + P
Sbjct: 512 CYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 571
Query: 318 TLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVL 377
T+ TYN+L+ G G+ + E+ E + +KG PN I++ +L +CLCK+ ++ A +L
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 631
Query: 378 GDMASRG 384
M G
Sbjct: 632 FKMMDMG 638
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 184/382 (48%), Gaps = 12/382 (3%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
MR+ G + + S N L L+ S+ + + V+ M+ G RP + +Y + +D
Sbjct: 179 MREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRD 238
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D L+ ME + P+V+ + + + L + ++ +A ++ M P+ VTY
Sbjct: 239 IDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTV 298
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LID C +++ A + +MK +P +TY LL + ++ ++ EME +G
Sbjct: 299 LIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG 358
Query: 181 FLPG--GFSRIVFDDDSACSNGN-GSLRANVAARIDE------RTYSALLNGFCRVGRIE 231
+P F+ +V D+ C GN G + D+ TY+ L+ G RV R++
Sbjct: 359 HVPDVVTFTILV---DALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLD 415
Query: 232 KAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLI 291
A E+ + GV P+ +Y + ++ Y G A++T E+M+ +G+ P+ V N +
Sbjct: 416 DALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASL 475
Query: 292 NKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMK 351
+ G +A++ + + G+ P TYN ++ Y ++ + ++L E+ + G +
Sbjct: 476 YSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCE 535
Query: 352 PNVISYGSLINCLCKDRKLLDA 373
P+VI SLIN L K ++ +A
Sbjct: 536 PDVIVVNSLINTLYKADRVDEA 557
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 147/288 (51%), Gaps = 31/288 (10%)
Query: 76 VGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAF 135
V P + YNL++GGL + ++ A+ +F ++ +P+ TYN L+D Y K G++++ F
Sbjct: 781 VQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELF 840
Query: 136 SLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVE-MEGNGFLPGGFSRIVFDDD 194
L M E + IT+N ++ GL +G V+DA ++ + M F P
Sbjct: 841 ELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSP----------- 889
Query: 195 SACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNI 254
+AC TY L++G + GR+ +AK++ +++ G P+ YNI
Sbjct: 890 TAC------------------TYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNI 931
Query: 255 LVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKG 314
L+N + G + A ++M + G++P T++ L++ C G VD+ + K++ E G
Sbjct: 932 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG 991
Query: 315 IAPTLETYNSLINGYGRISNFVKCFEILEEIE-KKGMKPNVISYGSLI 361
+ P + YN +ING G+ + + E++ +G+ P++ +Y SLI
Sbjct: 992 LNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLI 1039
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 156/360 (43%), Gaps = 31/360 (8%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
GV P + + N L L+ + E VF + +G PDV +Y ++A +D+
Sbjct: 780 GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLF-DEMLHRNLVPNTVTYNTLID 123
FEL M + +N+V+ GL K V DA L+ D M R+ P TY LID
Sbjct: 840 FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 899
Query: 124 GYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP 183
G K G + +A L M P+ YN L+ G +G + A + M G P
Sbjct: 900 GLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 959
Query: 184 GGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVEN 243
D +TYS L++ C VGR+++ +L E+
Sbjct: 960 -----------------------------DLKTYSVLVDCLCMVGRVDEGLHYFKELKES 990
Query: 244 GVVPSQISYNILVNAYCHEGYVEKAIQTAEQME-ERGLKPSYVTFNTLINKFCETGEVDQ 302
G+ P + YN+++N +E+A+ +M+ RG+ P T+N+LI G V++
Sbjct: 991 GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE 1050
Query: 303 AERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLIN 362
A + ++ G+ P + T+N+LI GY + + + + G PN +Y L N
Sbjct: 1051 AGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 167/349 (47%), Gaps = 44/349 (12%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSY-------GKAVE 53
MR G+LP++ + N L L+ + + L +F +M G++P +Y GK+ +
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD 448
Query: 54 AAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVP 113
+ L+ +K M+ + + P++ N L L K R ++A+++F + LVP
Sbjct: 449 SVSALETFEK-------MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVP 501
Query: 114 NTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVL 173
++VTYN ++ Y KVGE+++A L + M EP VI N L+ L + RV++A ++
Sbjct: 502 DSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMF 561
Query: 174 VEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKA 233
+ M+ L+ V TY+ LL G + G+I++A
Sbjct: 562 MRMK-----------------------EMKLKPTVV------TYNTLLAGLGKNGKIQEA 592
Query: 234 KEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINK 293
E+ +V+ G P+ I++N L + C V A++ +M + G P T+NT+I
Sbjct: 593 IELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFG 652
Query: 294 FCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEIL 342
+ G+V +A + +M +K + P T +L+ G + S ++I+
Sbjct: 653 LVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKII 700
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 182/393 (46%), Gaps = 14/393 (3%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
++ G++P + N + + + ++ + + ++M+E+G PDV+ +
Sbjct: 494 LKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADR 553
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D+ +++ M++ ++ P+V YN +L GL K ++++A +LF+ M+ + PNT+T+NT
Sbjct: 554 VDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNT 613
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L D CK E+ A + +M P V TYN ++ GL +G+V +A +M+
Sbjct: 614 LFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLV 673
Query: 181 F---------LPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIE 231
+ LPG + +D + N A + + L+ I+
Sbjct: 674 YPDFVTLCTLLPGVVKASLIEDAYKIIT---NFLYNCADQPANLFWEDLIGSILAEAGID 730
Query: 232 KAKEVLAKLVENGVVPSQISYNILVNAY-CHEGYVEKAIQTAEQM-EERGLKPSYVTFNT 289
A +LV NG+ S + + Y C V A E+ ++ G++P T+N
Sbjct: 731 NAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNL 790
Query: 290 LINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKG 349
LI E ++ A+ ++ G P + TYN L++ YG+ + FE+ +E+
Sbjct: 791 LIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHE 850
Query: 350 MKPNVISYGSLINCLCKDRKLLDAEIVLGDMAS 382
+ N I++ +I+ L K + DA + D+ S
Sbjct: 851 CEANTITHNIVISGLVKAGNVDDALDLYYDLMS 883
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 150/329 (45%), Gaps = 31/329 (9%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
++ G +P V + N L + S + +++ ++ +M + +++ + V +
Sbjct: 811 VKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGN 870
Query: 61 LDKGFELMGCMEKER-VGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYN 119
+D +L + +R P+ Y ++ GL K R+ +A++LF+ ML PN YN
Sbjct: 871 VDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYN 930
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN 179
LI+G+ K GE + A +L RM P + TY+ L+ LC GRV++ E++ +
Sbjct: 931 ILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES 990
Query: 180 GFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAK 239
G P D C Y+ ++NG + R+E+A + +
Sbjct: 991 GLNP----------DVVC-------------------YNLIINGLGKSHRLEEALVLFNE 1021
Query: 240 L-VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETG 298
+ G+ P +YN L+ G VE+A + +++ GL+P+ TFN LI + +G
Sbjct: 1022 MKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSG 1081
Query: 299 EVDQAERWVKKMLEKGIAPTLETYNSLIN 327
+ + A + M+ G +P TY L N
Sbjct: 1082 KPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 189/430 (43%), Gaps = 47/430 (10%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G P+ + N LF+ L + + L + M++ G PDV +Y + V
Sbjct: 599 MVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQ 658
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHR------NL--- 111
+ + M+K V P +L G+ K ++DA K+ L+ NL
Sbjct: 659 VKEAMCFFHQMKK-LVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWE 717
Query: 112 -----------VPNTVTYN--TLIDGYCKVGEMEKAFSLKARMKAPNA------------ 146
+ N V+++ + +G C+ G+ ++ K N
Sbjct: 718 DLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTK 777
Query: 147 ----EPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNG 202
+P + TYN L+GGL + + A++V ++++ G +P + D S
Sbjct: 778 DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKID 837
Query: 203 SL------RANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVEN-GVVPSQISYNIL 255
L + + T++ +++G + G ++ A ++ L+ + P+ +Y L
Sbjct: 838 ELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPL 897
Query: 256 VNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGI 315
++ G + +A Q E M + G +P+ +N LIN F + GE D A K+M+++G+
Sbjct: 898 IDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGV 957
Query: 316 APTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEI 375
P L+TY+ L++ + + +E+++ G+ P+V+ Y +IN L K +L +A +
Sbjct: 958 RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALV 1017
Query: 376 VLGDM-ASRG 384
+ +M SRG
Sbjct: 1018 LFNEMKTSRG 1027
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 141/314 (44%), Gaps = 29/314 (9%)
Query: 71 MEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGE 130
M+K + Y + L +K A +M V N +YN LI K
Sbjct: 144 MQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRF 203
Query: 131 MEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIV 190
+A + RM PS+ TY+ L+ GL ++ +L EME G P +
Sbjct: 204 CTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVY---- 259
Query: 191 FDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQI 250
T++ + R G+I +A E+L ++ + G P +
Sbjct: 260 -------------------------TFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVV 294
Query: 251 SYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKM 310
+Y +L++A C ++ A + E+M+ KP VT+ TL+++F + ++D +++ +M
Sbjct: 295 TYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEM 354
Query: 311 LEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKL 370
+ G P + T+ L++ + NF + F+ L+ + +G+ PN+ +Y +LI L + +L
Sbjct: 355 EKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRL 414
Query: 371 LDAEIVLGDMASRG 384
DA + G+M S G
Sbjct: 415 DDALELFGNMESLG 428
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 79/157 (50%)
Query: 228 GRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTF 287
G++E+ V + + + +Y + + +G +++A +M E G + ++
Sbjct: 132 GKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSY 191
Query: 288 NTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEK 347
N LI+ ++ +A ++M+ +G P+L+TY+SL+ G G+ + +L+E+E
Sbjct: 192 NGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMET 251
Query: 348 KGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
G+KPNV ++ I L + K+ +A +L M G
Sbjct: 252 LGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG 288
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 177 bits (450), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 179/415 (43%), Gaps = 64/415 (15%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G P + L L + + +A+ MV+ G +P++V+YG V D D
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
L+ ME ++ V ++N ++ LCK R V DA LF EM + + PN VTY++LI
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
C G A L + M P+++T+N L+ G+ +A ++ +M P
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
F TY++L+NGFC R++KAK++ +V
Sbjct: 365 IF-----------------------------TYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
P ++YN L+ +C VE + +M RGL VT+ TLI G+ D A+
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 455
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEK----------------- 347
+ K+M+ G+ P + TY+ L++G K E+ + ++K
Sbjct: 456 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 515
Query: 348 ------------------KGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
KG+KPNV++Y ++I+ LC R L +A +L M G
Sbjct: 516 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 182/364 (50%), Gaps = 30/364 (8%)
Query: 14 NRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEK 73
N + ++L + + L +F +M GIRP+VV+Y + +L+ M +
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 74 ERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEK 133
+++ P++ +N ++ K + +A KL+D+M+ R++ P+ TYN+L++G+C ++K
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 134 AFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDD 193
A + M + + P V+TYN L+ G C S RV D E+ EM G +
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG---------- 433
Query: 194 DSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYN 253
D TY+ L+ G G + A++V ++V +GV P ++Y+
Sbjct: 434 -------------------DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 474
Query: 254 ILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK 313
IL++ C+ G +EKA++ + M++ +K + T+I C+ G+VD + K
Sbjct: 475 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 534
Query: 314 GIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKD-RKLLD 372
G+ P + TYN++I+G + + +L+++++ G PN +Y +LI +D K
Sbjct: 535 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAAS 594
Query: 373 AEIV 376
AE++
Sbjct: 595 AELI 598
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 192/393 (48%), Gaps = 12/393 (3%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K LPS+ N+L + K+F+ V+++ M I + +Y +
Sbjct: 76 MVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQ 135
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ L+G M K PS+ + +L G C +R+ DA L D+M+ P+T+T+ T
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI G + +A +L RM +P+++TY ++ GLC G + A +L +ME
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK 255
Query: 181 FLPGG--FSRIVFDDDSACSNGNGSLRANVAARIDER-------TYSALLNGFCRVGRIE 231
F+ I+ DS C + N+ ++ + TYS+L++ C GR
Sbjct: 256 IEADVVIFNTII---DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 312
Query: 232 KAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLI 291
A ++L+ ++E + P+ +++N L++A+ EG +A + + M +R + P T+N+L+
Sbjct: 313 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 372
Query: 292 NKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMK 351
N FC +D+A++ + M+ K P + TYN+LI G+ + E+ E+ +G+
Sbjct: 373 NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 432
Query: 352 PNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ ++Y +LI L D +A+ V M S G
Sbjct: 433 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 181/367 (49%), Gaps = 8/367 (2%)
Query: 25 QFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYN 84
+ + + +F MV+S P +V + K + A +K D L M++ + ++ YN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 85 LVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAP 144
+++ C+ ++ A L +M+ P+ VT ++L++GYC + A +L +M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 145 NAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSL 204
P IT+ L+ GL + ++A ++ M G P + V + C G+ L
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV-VNGLCKRGDTDL 243
Query: 205 RANV-----AARI--DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVN 257
N+ AA+I D ++ +++ C+ ++ A + ++ G+ P+ ++Y+ L++
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 258 AYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAP 317
C G A Q M E+ + P+ VTFN LI+ F + G+ +AE+ M+++ I P
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 318 TLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVL 377
+ TYNSL+NG+ K ++ E + K P+V++Y +LI CK +++ D +
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 378 GDMASRG 384
+M+ RG
Sbjct: 424 REMSHRG 430
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 149/303 (49%), Gaps = 29/303 (9%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P++ + N L + V +F + ++ DM++ I PD+ +Y V M LDK ++
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
M + P V YN ++ G CK +RV+D +LF EM HR LV +TVTY TLI G
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
G+ + A + +M + P ++TY+ LL GLC++G++ A EV M+ +
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS-------- 499
Query: 188 RIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVP 247
++D Y+ ++ G C+ G+++ ++ L GV P
Sbjct: 500 ---------------------EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 538
Query: 248 SQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWV 307
+ ++YN +++ C + +++A ++M+E G P+ T+NTLI G+ + +
Sbjct: 539 NVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELI 598
Query: 308 KKM 310
++M
Sbjct: 599 REM 601
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 87/182 (47%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G++ + L + L + VF MV G+ PD+++Y ++
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L+K E+ M+K + +++Y ++ G+CK +V D LF + + + PN VTYNT
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+I G C +++A++L +MK P+ TYN L+ G + E++ EM
Sbjct: 546 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCR 605
Query: 181 FL 182
F+
Sbjct: 606 FV 607
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 177 bits (450), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 184/381 (48%), Gaps = 55/381 (14%)
Query: 36 MVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKER------VGPSVFVYNLVLGG 89
M E IRPDVV+ G + + +D+ E+ M +R + +N ++ G
Sbjct: 320 MDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDG 379
Query: 90 LCKVRRVKDARKLFDEM-LHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEP 148
LCKV R+K+A +L M L PN VTYN LIDGYC+ G++E A + +RMK +P
Sbjct: 380 LCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKP 439
Query: 149 SVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGN------- 201
+V+T N ++GG+C +N A ++ME G + G + + CS N
Sbjct: 440 NVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG-VKGNVVTYMTLIHACCSVSNVEKAMYW 498
Query: 202 --GSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAY 259
L A + D + Y AL++G C+V R A V+ KL E G ++YN+L+ +
Sbjct: 499 YEKMLEAGCSP--DAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLF 556
Query: 260 CHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTL 319
C + EK + ME+ G KP +T+NTLI+ F + + + ER +++M E G+ PT+
Sbjct: 557 CDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTV 616
Query: 320 ET------------------------------------YNSLINGYGRISNFVKCFEILE 343
T YN LIN + ++ NF + + E
Sbjct: 617 TTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKE 676
Query: 344 EIEKKGMKPNVISYGSLINCL 364
E++ K ++PNV +Y +L CL
Sbjct: 677 EMKMKMVRPNVETYNALFKCL 697
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 182/403 (45%), Gaps = 57/403 (14%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQF-------EKVLAVFTDMVESGIRPDVVSYGKAVE 53
++K+ V P NR+ +V + + EK++A+ + G+ P+ V + +
Sbjct: 212 LQKESVFPP----NRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFIS 267
Query: 54 AAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVP 113
+ + ++++ + K + +N +L L + + L +M + P
Sbjct: 268 SLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRP 327
Query: 114 NTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAE------PSVITYNCLLGGLCSSGRVN 167
+ VT LI+ CK +++A + +M+ + I +N L+ GLC GR+
Sbjct: 328 DVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLK 387
Query: 168 DAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDER------TYSALL 221
+A E+LV M +++ER TY+ L+
Sbjct: 388 EAEELLVRM----------------------------------KLEERCAPNAVTYNCLI 413
Query: 222 NGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLK 281
+G+CR G++E AKEV++++ E+ + P+ ++ N +V C + A+ ME+ G+K
Sbjct: 414 DGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVK 473
Query: 282 PSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEI 341
+ VT+ TLI+ C V++A W +KMLE G +P + Y +LI+G ++ +
Sbjct: 474 GNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRV 533
Query: 342 LEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+E++++ G ++++Y LI C +L DM G
Sbjct: 534 VEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEG 576
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 155/358 (43%), Gaps = 30/358 (8%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P+ + N L + + + E V + M E I+P+VV+ V L+
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
MEKE V +V Y ++ C V V+ A +++ML P+ Y LI G C+
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
V A + ++K ++ YN L+G C E+L +ME G P
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKP---- 579
Query: 188 RIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVP 247
D TY+ L++ F + E + ++ ++ E+G+ P
Sbjct: 580 -------------------------DSITYNTLISFFGKHKDFESVERMMEQMREDGLDP 614
Query: 248 SQISYNILVNAYCHEGYVEKAIQTAEQME-ERGLKPSYVTFNTLINKFCETGEVDQAERW 306
+ +Y +++AYC G +++A++ + M + P+ V +N LIN F + G QA
Sbjct: 615 TVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674
Query: 307 VKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
++M K + P +ETYN+L + ++++E+ ++ +PN I+ L+ L
Sbjct: 675 KEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 157/354 (44%), Gaps = 36/354 (10%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M++D + P+V +VN + + + F DM + G++ +VV+Y + A + +
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
++K M + P +Y ++ GLC+VRR DA ++ +++ + + YN
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI +C EK + + M+ +P ITYN L+ ++ +M +G
Sbjct: 552 LIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P TY A+++ +C VG +++A ++ +
Sbjct: 612 LDPTV-----------------------------TTYGAVIDAYCSVGELDEALKLFKDM 642
Query: 241 -VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGE 299
+ + V P+ + YNIL+NA+ G +A+ E+M+ + ++P+ T+N L E +
Sbjct: 643 GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQ 702
Query: 300 VDQAERWVKKMLEKGIAP---TLETYNSLINGYG---RISNFVKCFEILEEIEK 347
+ + + +M+E+ P T+E ++G ++ F++ + + EK
Sbjct: 703 GETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQGYSVASPTEK 756
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 159/345 (46%), Gaps = 54/345 (15%)
Query: 82 VYNLVLGGLCKVRRVKDARKLFDEMLHRNLV--PNTVTYNTLIDGYCKVGEM---EKAFS 136
V N+V+ L + V DA K+ DEML + V PN +T + ++ K G + EK +
Sbjct: 187 VRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWK-GRLLTEEKIIA 245
Query: 137 LKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEG----------NGFLP--G 184
L +R + P+ + + LC + R N A ++L ++ N L G
Sbjct: 246 LISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLG 305
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAA------------RIDE-----------RT----- 216
I +D +R +V R+DE RT
Sbjct: 306 RNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNV 365
Query: 217 -------YSALLNGFCRVGRIEKAKEVLAKL-VENGVVPSQISYNILVNAYCHEGYVEKA 268
++ L++G C+VGR+++A+E+L ++ +E P+ ++YN L++ YC G +E A
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETA 425
Query: 269 IQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLING 328
+ +M+E +KP+ VT NT++ C ++ A + M ++G+ + TY +LI+
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
Query: 329 YGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDA 373
+SN K E++ + G P+ Y +LI+ LC+ R+ DA
Sbjct: 486 CCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA 530
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 186/390 (47%), Gaps = 6/390 (1%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + LPS+ +RL + ++E V+++F + GI D+ S+ ++
Sbjct: 70 MAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCAR 129
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L +G M K PS+ + ++ G C V R +A L D+++ PN V YNT
Sbjct: 130 LSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNT 189
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+ID C+ G++ A + MK P V+TYN L+ L SG + +L +M G
Sbjct: 190 IIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMG 249
Query: 181 FLPG--GFSRI--VFDDDSACSNGNGSLRANVAARIDER--TYSALLNGFCRVGRIEKAK 234
P FS + V+ + + ++ TY++L+NG C G +++AK
Sbjct: 250 ISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAK 309
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
+VL LV G P+ ++YN L+N YC V+ ++ M G+ T+NTL +
Sbjct: 310 KVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGY 369
Query: 295 CETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNV 354
C+ G+ AE+ + +M+ G+ P + T+N L++G K LE+++K +
Sbjct: 370 CQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGI 429
Query: 355 ISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
I+Y +I LCK K+ DA + +A +G
Sbjct: 430 ITYNIIIKGLCKADKVEDAWYLFCSLALKG 459
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 171/362 (47%), Gaps = 29/362 (8%)
Query: 23 SKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFV 82
S +F L +F DM ES P +V + + + A L + L +E + ++
Sbjct: 57 SIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYS 116
Query: 83 YNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMK 142
+ ++ C+ R+ A +M+ P+ VT+ +L++G+C V +A SL ++
Sbjct: 117 FTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIV 176
Query: 143 APNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNG 202
EP+V+ YN ++ LC G+VN A +VL M+ G P
Sbjct: 177 GLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRP------------------- 217
Query: 203 SLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHE 262
D TY++L+ G + +L+ ++ G+ P I+++ L++ Y E
Sbjct: 218 ----------DVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKE 267
Query: 263 GYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETY 322
G + +A + +M +R + P+ VT+N+LIN C G +D+A++ + ++ KG P TY
Sbjct: 268 GQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTY 327
Query: 323 NSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMAS 382
N+LINGY + +IL + + G+ + +Y +L C+ K AE VLG M S
Sbjct: 328 NTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVS 387
Query: 383 RG 384
G
Sbjct: 388 CG 389
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 170/349 (48%), Gaps = 30/349 (8%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G P+V N + ++L Q L V M + GIRPDVV+Y +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
++ M + + P V ++ ++ K ++ +A+K ++EM+ R++ PN VTYN+LI+G
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
C G +++A + + + P+ +TYN L+ G C + RV+D ++L M +G
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV--- 355
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
D D+ TY+ L G+C+ G+ A++VL ++V G
Sbjct: 356 -------DGDTF-------------------TYNTLYQGYCQAGKFSAAEKVLGRMVSCG 389
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
V P ++NIL++ C G + KA+ E +++ +T+N +I C+ +V+ A
Sbjct: 390 VHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAW 449
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKK-GMKP 352
+ KG++P + TY +++ G R + + E+ +++K+ G+ P
Sbjct: 450 YLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 170/374 (45%), Gaps = 29/374 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K G PS+ + L +F + +++ +V G P+VV Y +++
Sbjct: 140 MMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQ 199
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
++ +++ M+K + P V YN ++ L + ++ +M+ + P+ +T++
Sbjct: 200 VNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSA 259
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LID Y K G++ +A M + P+++TYN L+ GLC G +++A++VL + G
Sbjct: 260 LIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKG 319
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
F P TY+ L+NG+C+ R++ ++L +
Sbjct: 320 FFPNAV-----------------------------TYNTLINGYCKAKRVDDGMKILCVM 350
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+GV +YN L YC G A + +M G+ P TFN L++ C+ G++
Sbjct: 351 SRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKI 410
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
+A ++ + + + TYN +I G + + + + KG+ P+VI+Y ++
Sbjct: 411 GKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITM 470
Query: 361 INCLCKDRKLLDAE 374
+ L + R +A
Sbjct: 471 MIGLRRKRLWREAH 484
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 183/376 (48%), Gaps = 35/376 (9%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G P + L L + + +A+ MV+ G +PD+V+YG V D
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D L+ ME R+ +V ++N ++ LCK R V+ A LF EM + + PN VTYN+
Sbjct: 239 IDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNS 298
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI+ C G A L + M P+V+T+N L+ G++ +A ++ EM
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P D TY+ L+NGFC R+++AK++ +
Sbjct: 359 IDP-----------------------------DTITYNLLINGFCMHNRLDEAKQMFKFM 389
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
V +P+ +YN L+N +C VE ++ +M +RGL + VT+ T+I F + G+
Sbjct: 390 VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC 449
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLING---YGRISNFVKCFEILEEIEKKGMKPNVISY 357
D A+ K+M+ + + TY+ L++G YG++ + F+ L++ E M+ N+ Y
Sbjct: 450 DSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE---MELNIFIY 506
Query: 358 GSLINCLCKDRKLLDA 373
++I +CK K+ +A
Sbjct: 507 NTMIEGMCKAGKVGEA 522
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 192/391 (49%), Gaps = 12/391 (3%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K PS+ N+L + +FE V+++ M GI D+ +Y +
Sbjct: 74 MVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQ 133
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L ++ M K P + + +L G C +R+ DA L D+M+ P+T T+ T
Sbjct: 134 LSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTT 193
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI G + +A +L +M +P ++TY ++ GLC G ++ A +L +ME
Sbjct: 194 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR 253
Query: 181 FLPGG--FSRIVFDDDSACSNGNGSLRANVAARIDER-------TYSALLNGFCRVGRIE 231
F+ I+ DS C + + ++ ++ + TY++L+N C GR
Sbjct: 254 IKANVVIFNTII---DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWS 310
Query: 232 KAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLI 291
A +L+ ++E + P+ +++N L++A+ EG + +A + E+M +R + P +T+N LI
Sbjct: 311 DASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLI 370
Query: 292 NKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMK 351
N FC +D+A++ K M+ K P ++TYN+LING+ + E+ E+ ++G+
Sbjct: 371 NGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLV 430
Query: 352 PNVISYGSLINCLCKDRKLLDAEIVLGDMAS 382
N ++Y ++I + A++V M S
Sbjct: 431 GNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS 461
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 169/329 (51%), Gaps = 6/329 (1%)
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D +L G M K R PS+ +N +L + K+ + + L ++M + + TY+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
I+ +C+ ++ A ++ A+M EP ++T + LL G C S R++DA ++ +M G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARI------DERTYSALLNGFCRVGRIEKAK 234
+ P F+ N A V + D TY ++NG C+ G I+ A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
+L K+ + + + +N ++++ C +VE A+ +ME +G++P+ VT+N+LIN
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 295 CETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNV 354
C G A R + MLEK I P + T+N+LI+ + + V+ ++ EE+ ++ + P+
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 355 ISYGSLINCLCKDRKLLDAEIVLGDMASR 383
I+Y LIN C +L +A+ + M S+
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSK 392
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 179/363 (49%), Gaps = 10/363 (2%)
Query: 14 NRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEK 73
N + ++L + E + +FT+M GIRP+VV+Y + L+ M +
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 74 ERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEK 133
+++ P+V +N ++ K ++ +A KL +EM+ R++ P+T+TYN LI+G+C +++
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 134 AFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGG--FSRIV- 190
A + M + + P++ TYN L+ G C RV D E+ EM G + ++ I+
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 191 -FDDDSACSNGNGSLRANVAARI--DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVP 247
F C + + V+ R+ D TYS LL+G C G+++ A + L ++ +
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501
Query: 248 SQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWV 307
+ YN ++ C G V +A + +KP VT+NT+I+ C + +A+
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLF 558
Query: 308 KKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKD 367
+KM E G P TYN+LI R + E+++E+ G + S SL+ + D
Sbjct: 559 RKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDA-STISLVTNMLHD 617
Query: 368 RKL 370
+L
Sbjct: 618 GRL 620
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 184/362 (50%), Gaps = 12/362 (3%)
Query: 25 QFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYN 84
Q LAV M++ G PD+V+ + K + L+ M + P F +
Sbjct: 133 QLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFT 192
Query: 85 LVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAP 144
++ GL + +A L D+M+ R P+ VTY T+++G CK G+++ A +L +M+A
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAA 252
Query: 145 NAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG--GFSRIVFDDDSACSNGNG 202
+ +V+ +N ++ LC V A ++ EME G P ++ ++ + C+ G
Sbjct: 253 RIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI---NCLCNYGRW 309
Query: 203 SLRANVAARIDER-------TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNIL 255
S + + + + E+ T++AL++ F + G++ +A+++ ++++ + P I+YN+L
Sbjct: 310 SDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLL 369
Query: 256 VNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGI 315
+N +C +++A Q + M + P+ T+NTLIN FC+ V+ ++M ++G+
Sbjct: 370 INGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGL 429
Query: 316 APTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEI 375
TY ++I G+ + + + +++ + ++++Y L++ LC KL A +
Sbjct: 430 VGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALV 489
Query: 376 VL 377
+
Sbjct: 490 IF 491
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 145/315 (46%), Gaps = 29/315 (9%)
Query: 69 GCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKV 128
GC E+ S ++ L + +V DA LF +M+ P+ V +N L+ K+
Sbjct: 37 GCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKM 96
Query: 129 GEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSR 188
+ E SL +M+ + TY+ + C +++ A VL +M G+ P
Sbjct: 97 NKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEP----- 151
Query: 189 IVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPS 248
D T S+LLNG+C RI A ++ ++VE G P
Sbjct: 152 ------------------------DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 187
Query: 249 QISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVK 308
++ L++ +A+ +QM +RG +P VT+ T++N C+ G++D A +
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLN 247
Query: 309 KMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDR 368
KM I + +N++I+ + + ++ E+E KG++PNV++Y SLINCLC
Sbjct: 248 KMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYG 307
Query: 369 KLLDAEIVLGDMASR 383
+ DA +L +M +
Sbjct: 308 RWSDASRLLSNMLEK 322
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 151/332 (45%), Gaps = 42/332 (12%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + + P+V + N L + + + + +M++ I PD ++Y + M
Sbjct: 319 MLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNR 378
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
LD+ ++ M + P++ YN ++ G CK +RV+D +LF EM R LV NTVTY T
Sbjct: 379 LDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTT 438
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVL-----VE 175
+I G+ + G+ + A + +M + ++TY+ LL GLCS G+++ A + E
Sbjct: 439 IIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE 498
Query: 176 MEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKE 235
ME N F+ Y+ ++ G C+ G++ +A +
Sbjct: 499 MELNIFI----------------------------------YNTMIEGMCKAGKVGEAWD 524
Query: 236 VLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFC 295
+ L + P ++YN +++ C + +++A +M+E G P+ T+NTLI
Sbjct: 525 LFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANL 581
Query: 296 ETGEVDQAERWVKKMLEKGIAPTLETYNSLIN 327
+ + +K+M G T + + N
Sbjct: 582 RDCDRAASAELIKEMRSSGFVGDASTISLVTN 613
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 81/165 (49%)
Query: 220 LLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERG 279
L N + +++ A ++ +V++ PS + +N L++A E I EQM+ G
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 280 LKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCF 339
+ T++ IN FC ++ A + KM++ G P + T +SL+NGY
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 340 EILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+++++ + G KP+ ++ +LI+ L K +A ++ M RG
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 190/387 (49%), Gaps = 11/387 (2%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P+ S N + + L + ++ + VF M E PD +Y ++ + +D+ L
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLL 244
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
+ M+ E PS +YN+++ GLCK + KL D M + VPN VTYNTLI G C
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 304
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
G+++KA SL RM + P+ +TY L+ GL R DA +L ME G+
Sbjct: 305 KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHI 364
Query: 188 RIVFDDDSACSNGNGSLRANVAARIDER-------TYSALLNGFCRVGRIEKAKEVLAKL 240
V G ++ ++ E+ YS L++G CR G+ +AKE+L ++
Sbjct: 365 YSVLIS-GLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM 423
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+ +G +P+ +Y+ L+ + G E+A+Q ++M++ G + ++ LI+ C G V
Sbjct: 424 IASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRV 483
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEI---EKKGMKPNVISY 357
+A KML GI P Y+S+I G I + ++ E+ E+ +P+V++Y
Sbjct: 484 KEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTY 543
Query: 358 GSLINCLCKDRKLLDAEIVLGDMASRG 384
L++ LC + + A +L M RG
Sbjct: 544 NILLDGLCMQKDISRAVDLLNSMLDRG 570
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 182/380 (47%), Gaps = 33/380 (8%)
Query: 9 SVRSVNRLFETLVGSKQFEKVLAVFTDMVESG----IRPDVVSYGKAVEAAVMLKDLDKG 64
SV+S N + ++ + + L + +V S I P+ +S+ ++A L+ +D+
Sbjct: 147 SVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRA 206
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
E+ M + + P + Y ++ GLCK R+ +A L DEM P+ V YN LIDG
Sbjct: 207 IEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDG 266
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
CK G++ + L M P+ +TYN L+ GLC G+++ A +L M + +P
Sbjct: 267 LCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIP- 325
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
++ TY L+NG + R A +L+ + E G
Sbjct: 326 ----------------------------NDVTYGTLINGLVKQRRATDAVRLLSSMEERG 357
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
+Q Y++L++ EG E+A+ +M E+G KP+ V ++ L++ C G+ ++A+
Sbjct: 358 YHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAK 417
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
+ +M+ G P TY+SL+ G+ + + ++ +E++K G N Y LI+ L
Sbjct: 418 EILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGL 477
Query: 365 CKDRKLLDAEIVLGDMASRG 384
C ++ +A +V M + G
Sbjct: 478 CGVGRVKEAMMVWSKMLTIG 497
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 171/367 (46%), Gaps = 32/367 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+ +G PS N L + L +V + +M G P+ V+Y + +
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 307
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
LDK L+ M + P+ Y ++ GL K RR DA +L M R N Y+
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSV 367
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI G K G+ E+A SL +M +P+++ Y+ L+ GLC G+ N+A+E+L M +G
Sbjct: 368 LISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
LP + TYS+L+ GF + G E+A +V ++
Sbjct: 428 CLPNAY-----------------------------TYSSLMKGFFKTGLCEEAVQVWKEM 458
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+ G ++ Y++L++ C G V++A+ +M G+KP V ++++I C G +
Sbjct: 459 DKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSM 518
Query: 301 DQAERWVKKML---EKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISY 357
D A + +ML E P + TYN L++G + + ++L + +G P+VI+
Sbjct: 519 DAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITC 578
Query: 358 GSLINCL 364
+ +N L
Sbjct: 579 NTFLNTL 585
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 91/180 (50%), Gaps = 7/180 (3%)
Query: 211 RIDERTYSALLNGFCRVGRIEKAKEVLAKL-VENGVVPSQISYNILVNAYCHEGYVEKAI 269
++ + T S+++ + G + +++L+++ +EN V+ + S+ ++ AY +KA+
Sbjct: 74 KLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIER-SFIVVFRAYGKAHLPDKAV 132
Query: 270 QTAEQM-EERGLKPSYVTFNTLINKFCETGEVDQAERW----VKKMLEKGIAPTLETYNS 324
+M +E K S +FN+++N G + + V + I+P ++N
Sbjct: 133 DLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNL 192
Query: 325 LINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+I ++ + E+ + ++ P+ +Y +L++ LCK+ ++ +A ++L +M S G
Sbjct: 193 VIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEG 252
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 181/381 (47%), Gaps = 41/381 (10%)
Query: 27 EKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLV 86
EK A+F M+ SG+ P +Y +E K++ +G+EL+ M+K + S + Y V
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423
Query: 87 LGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNA 146
+ G+C + A + EM+ PN V Y TLI + + A + MK
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI 483
Query: 147 EPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDD------------- 193
P + YN L+ GL + R+++AR LVEM NG P F+ F
Sbjct: 484 APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADK 543
Query: 194 ---------------------DSACSNGN-----GSLRANVAARI--DERTYSALLNGFC 225
+ C G + R+ V I D +TY+ L+NG
Sbjct: 544 YVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF 603
Query: 226 RVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYV 285
+ +++ A+E+ ++ G+ P SY +L+N + G ++KA ++M E GL P+ +
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 286 TFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEI 345
+N L+ FC +GE+++A+ + +M KG+ P TY ++I+GY + + + F + +E+
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 346 EKKGMKPNVISYGSLINCLCK 366
+ KG+ P+ Y +L++ C+
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCR 744
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 196/429 (45%), Gaps = 48/429 (11%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M++ G+ P + N L L +K+ ++ + +MVE+G++P+ +YG + + +
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 61 L------------------------------DKGFELMGC-----MEKERVGPSVFVYNL 85
KG + C M + + Y +
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 86 VLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPN 145
++ GL K +V DA ++F EM + + P+ +Y LI+G+ K+G M+KA S+ M
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 146 AEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGN--GS 203
P+VI YN LLGG C SG + A+E+L EM G P + D C +G+ +
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIID-GYCKSGDLAEA 716
Query: 204 LRANVAARI-----DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNA 258
R ++ D Y+ L++G CR+ +E+A + + G S +N L+N
Sbjct: 717 FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKGCASSTAPFNALINW 775
Query: 259 YCHEGYVEKAIQTAEQMEE----RGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKG 314
G E + ++ + R KP+ VT+N +I+ C+ G ++ A+ +M
Sbjct: 776 VFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNAN 835
Query: 315 IAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAE 374
+ PT+ TY SL+NGY ++ + F + +E G++P+ I Y +IN K+ A
Sbjct: 836 LMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKAL 895
Query: 375 IVLGDMASR 383
+++ M ++
Sbjct: 896 VLVDQMFAK 904
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 182/385 (47%), Gaps = 26/385 (6%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G+L ++ L L + + + +F +M GI PDV SYG + L +
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ K + M +E + P+V +YN++LGG C+ ++ A++L DEM + L PN VTY T
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVL----VEM 176
+IDGYCK G++ +AF L MK P Y L+ G C R+ND +
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC---RLNDVERAITIFGTNK 759
Query: 177 EGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARI-----------DERTYSALLNGFC 225
+G F+ ++ + G L+ V R+ ++ TY+ +++ C
Sbjct: 760 KGCASSTAPFNALI---NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLC 816
Query: 226 RVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYV 285
+ G +E AKE+ ++ ++P+ I+Y L+N Y G + ++ G++P ++
Sbjct: 817 KEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHI 876
Query: 286 TFNTLINKFCETGEVDQAERWVKKMLEK-----GIAPTLETYNSLINGYGRISNFVKCFE 340
++ +IN F + G +A V +M K G ++ T +L++G+ ++ +
Sbjct: 877 MYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEK 936
Query: 341 ILEEIEKKGMKPNVISYGSLINCLC 365
++E + + P+ + LIN C
Sbjct: 937 VMENMVRLQYIPDSATVIELINESC 961
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 199/421 (47%), Gaps = 41/421 (9%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G++P + + L + L K+ E ++ +M G+ D +Y ++ + ++ D
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
L+ M + ++Y+ + + K ++ A+ LFD M+ L+P Y +LI+G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
YC+ + + + L MK N S TY ++ G+CSSG ++ A ++ EM +G P
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 185 G--FSRIV--FDDDSACSNGNGSLRANVAARI--DERTYSALLNGFCRVGRIEKAKEVLA 238
++ ++ F +S + L+ I D Y++L+ G + R+++A+ L
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511
Query: 239 KLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETG 298
++VENG+ P+ +Y ++ Y A + ++M E G+ P+ V LIN++C+ G
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571
Query: 299 -----------------------------------EVDQAERWVKKMLEKGIAPTLETYN 323
+VD AE ++M KGIAP + +Y
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631
Query: 324 SLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
LING+ ++ N K I +E+ ++G+ PNVI Y L+ C+ ++ A+ +L +M+ +
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691
Query: 384 G 384
G
Sbjct: 692 G 692
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 164/378 (43%), Gaps = 50/378 (13%)
Query: 6 VLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGF 65
++P + L + L+ + + V+ MVE + DV +Y + A ++ G
Sbjct: 182 LVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGK 241
Query: 66 ELMGCMEKER---------------------VGPSVFVYNLVLGGLCKVRRVKDARKLFD 104
+++ EKE + P + Y++++ GLCK++R++DA+ L
Sbjct: 242 DVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLV 301
Query: 105 EMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSG 164
EM + + TY+ LIDG K + A L M + Y+C + + G
Sbjct: 302 EMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEG 361
Query: 165 RVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGF 224
+ A+ + M +G +P + Y++L+ G+
Sbjct: 362 VMEKAKALFDGMIASGLIPQA-----------------------------QAYASLIEGY 392
Query: 225 CRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSY 284
CR + + E+L ++ + +V S +Y +V C G ++ A ++M G +P+
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452
Query: 285 VTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEE 344
V + TLI F + A R +K+M E+GIAP + YNSLI G + + L E
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512
Query: 345 IEKKGMKPNVISYGSLIN 362
+ + G+KPN +YG+ I+
Sbjct: 513 MVENGLKPNAFTYGAFIS 530
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 137/308 (44%), Gaps = 18/308 (5%)
Query: 82 VYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARM 141
++ ++ G +++A +F + LVP L+D + ++ + + M
Sbjct: 153 LFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGM 212
Query: 142 KAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGN 201
N V TY+ L+ C +G V ++VL + E + +A N +
Sbjct: 213 VERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEK-------------EFRTATLNVD 259
Query: 202 GSLRANVAARID-----ERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILV 256
G+L+ + + TY L++G C++ R+E AK +L ++ GV +Y++L+
Sbjct: 260 GALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLI 319
Query: 257 NAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIA 316
+ + A +M G+ ++ I + G +++A+ M+ G+
Sbjct: 320 DGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLI 379
Query: 317 PTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIV 376
P + Y SLI GY R N + +E+L E++K+ + + +YG+++ +C L A +
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439
Query: 377 LGDMASRG 384
+ +M + G
Sbjct: 440 VKEMIASG 447
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 83/209 (39%), Gaps = 40/209 (19%)
Query: 216 TYSALLNGFCRVGRIEKAKEVLAKLVEN-------------------GVVPSQISYNILV 256
++S L C G EKA V+ +++E G + + IL
Sbjct: 99 SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILF 158
Query: 257 NAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIA 316
+ Y +GY+E+A+ L P L++ +D K M+E+ +
Sbjct: 159 DGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVV 218
Query: 317 PTLETYNSLINGYGRISNFVKCFEILEEIEK---------------------KGMKPNVI 355
++TY+ LI + R N ++L + EK KG+ P
Sbjct: 219 FDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKY 278
Query: 356 SYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+Y LI+ LCK ++L DA+ +L +M S G
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLG 307
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 178/358 (49%), Gaps = 33/358 (9%)
Query: 17 FETLVGSKQFE----KVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCME 72
F TLV E + +A+ MVE RPD+V+ + + + + L+ M
Sbjct: 143 FSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV 202
Query: 73 KERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEME 132
+ P Y VL LCK A LF +M RN+ + V Y+ +ID CK G +
Sbjct: 203 EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFD 262
Query: 133 KAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFD 192
A SL M+ + V+TY+ L+GGLC+ G+ +D ++L EM G +P
Sbjct: 263 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP--------- 313
Query: 193 DDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISY 252
D T+SAL++ F + G++ +AKE+ +++ G+ P I+Y
Sbjct: 314 --------------------DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 253 NILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLE 312
N L++ +C E + +A Q + M +G +P VT++ LIN +C+ VD R +++
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Query: 313 KGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKL 370
KG+ P TYN+L+ G+ + E+ +E+ +G+ P+V++YG L++ LC + +L
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGEL 471
Score = 174 bits (441), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 188/386 (48%), Gaps = 12/386 (3%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P + +V+ L L + + L + MVE G +PD V+YG + + +L
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
ME+ + SV Y++V+ LCK DA LF+EM + + + VTY++LI G C
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
G+ + + M N P V+T++ L+ G++ +A+E+ EM G P
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP---D 349
Query: 188 RIVFDD--DSAC-------SNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLA 238
I ++ D C +N L + D TYS L+N +C+ R++ +
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 239 KLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETG 298
++ G++P+ I+YN LV +C G + A + ++M RG+ PS VT+ L++ C+ G
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 299 EVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYG 358
E+++A +KM + + + YN +I+G S + + + KG+KP+V++Y
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529
Query: 359 SLINCLCKDRKLLDAEIVLGDMASRG 384
+I LCK L +A+++ M G
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKEDG 555
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 189/405 (46%), Gaps = 65/405 (16%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + + SV + + ++L F+ L++F +M GI+ DVV+Y +
Sbjct: 236 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 295
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
D G +++ M + P V ++ ++ K ++ +A++L++EM+ R + P+T+TYN+
Sbjct: 296 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 355
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LIDG+CK + +A + M + EP ++TY+ L+ C + RV+D + E+ G
Sbjct: 356 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
+P TY+ L+ GFC+ G++ AKE+ ++
Sbjct: 416 LIPNTI-----------------------------TYNTLVLGFCQSGKLNAAKELFQEM 446
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQME------------------------ 276
V GV PS ++Y IL++ C G + KA++ E+M+
Sbjct: 447 VSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKV 506
Query: 277 -----------ERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSL 325
++G+KP VT+N +I C+ G + +A+ +KM E G P TYN L
Sbjct: 507 DDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNIL 566
Query: 326 INGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKL 370
I + S + E++EE++ G + + +I+ L DR+L
Sbjct: 567 IRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML-SDRRL 610
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 188/387 (48%), Gaps = 12/387 (3%)
Query: 7 LPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFE 66
LP+ NRL + +KQ++ VL M +GI D+ + + K L F
Sbjct: 67 LPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFS 126
Query: 67 LMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYC 126
++G K P ++ ++ G C RV +A L D M+ P+ VT +TLI+G C
Sbjct: 127 VLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLC 186
Query: 127 KVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG-- 184
G + +A L RM +P +TY +L LC SG A ++ +ME
Sbjct: 187 LKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVV 246
Query: 185 GFSRIVFDDDSACSNGNGSLRANV-------AARIDERTYSALLNGFCRVGRIEKAKEVL 237
+S ++ DS C +G+ ++ + D TYS+L+ G C G+ + ++L
Sbjct: 247 QYSIVI---DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303
Query: 238 AKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCET 297
+++ ++P ++++ L++ + EG + +A + +M RG+ P +T+N+LI+ FC+
Sbjct: 304 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 363
Query: 298 GEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISY 357
+ +A + M+ KG P + TY+ LIN Y + + EI KG+ PN I+Y
Sbjct: 364 NCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 423
Query: 358 GSLINCLCKDRKLLDAEIVLGDMASRG 384
+L+ C+ KL A+ + +M SRG
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQEMVSRG 450
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 85/168 (50%), Gaps = 7/168 (4%)
Query: 220 LLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERG 279
L NG + ++ A ++ ++++ +P+ I +N L +A + + + ME G
Sbjct: 42 LRNGIVDI-KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNG 100
Query: 280 LKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGY---GRISNFV 336
++ T +IN +C ++ A + + + G P T+++L+NG+ GR+S V
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160
Query: 337 KCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ + E+++ +P++++ +LIN LC ++ +A +++ M G
Sbjct: 161 ALVDRMVEMKQ---RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG 205
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 180/343 (52%), Gaps = 24/343 (6%)
Query: 45 VVSYGKAVEAAVMLKDL-DKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLF 103
+V +GK +EA +LK + DKG +GPS++ YN+++ GLCK+ + DA+ +
Sbjct: 336 LVRHGKFIEAETVLKQMTDKG-----------IGPSIYSYNILMDGLCKLGMLSDAKTIV 384
Query: 104 DEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSS 163
M + P+ VTY L+ GYC VG+++ A SL M N P+ T N LL L
Sbjct: 385 GLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKM 444
Query: 164 GRVNDAREVLVEMEGNGFLPGGFSRIVFDD--DSACSNGNGSLRANVAARIDERTYSALL 221
GR+++A E+L +M G+ G + + D C +G + + +AL
Sbjct: 445 GRISEAEELLRKMNEKGY---GLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALG 501
Query: 222 N-GFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGL 280
N G +G ++ + L+EN +P I+Y+ L+N C G +A +M L
Sbjct: 502 NLGNSYIGLVDDS------LIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKL 555
Query: 281 KPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFE 340
+P V +N I+ FC+ G++ A R +K M +KG +LETYNSLI G G + +
Sbjct: 556 QPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHG 615
Query: 341 ILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
+++E+++KG+ PN+ +Y + I LC+ K+ DA +L +M +
Sbjct: 616 LMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQK 658
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/456 (25%), Positives = 195/456 (42%), Gaps = 81/456 (17%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
+R++ L S++S N + LV +F + V M + GI P + SY ++ L
Sbjct: 317 IRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGM 376
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L ++G M++ V P Y +L G C V +V A+ L EM+ N +PN T N
Sbjct: 377 LSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI 436
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVL--VEMEG 178
L+ K+G + +A L +M +T N ++ GLC SG ++ A E++ + + G
Sbjct: 437 LLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496
Query: 179 NGFLPG-GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVL 237
+ L G S I DDS N D TYS LLNG C+ GR +AK +
Sbjct: 497 SAALGNLGNSYIGLVDDSLIENN---------CLPDLITYSTLLNGLCKAGRFAEAKNLF 547
Query: 238 AKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQME--------------------- 276
A+++ + P ++YNI ++ +C +G + A + + ME
Sbjct: 548 AEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIK 607
Query: 277 --------------ERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETY 322
E+G+ P+ T+NT I CE +V+ A + +M++K IAP + ++
Sbjct: 608 NQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSF 667
Query: 323 NSLINGYGRISNF----------------------------------VKCFEILEEIEKK 348
LI + ++ +F +K E+LE + +
Sbjct: 668 KYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDR 727
Query: 349 GMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
G + Y L+ LCK +L A +L M RG
Sbjct: 728 GFELGTFLYKDLVESLCKKDELEVASGILHKMIDRG 763
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 176/377 (46%), Gaps = 25/377 (6%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
PSV N L E+ + ++ E V ++ DMV GI P ++ + A +D EL
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
M ++ P+ F + +++ G CK +L + M ++PN V YNT++ +C+
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
G + + + +M+ P ++T+N + LC G+V DA + +ME + +L
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYL----- 284
Query: 188 RIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVP 247
G R N TY+ +L GFC+VG +E AK + + EN +
Sbjct: 285 --------------GLPRPNSI------TYNLMLKGFCKVGLLEDAKTLFESIRENDDLA 324
Query: 248 SQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWV 307
S SYNI + G +A +QM ++G+ PS ++N L++ C+ G + A+ V
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384
Query: 308 KKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKD 367
M G+ P TY L++GY + +L+E+ + PN + L++ L K
Sbjct: 385 GLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKM 444
Query: 368 RKLLDAEIVLGDMASRG 384
++ +AE +L M +G
Sbjct: 445 GRISEAEELLRKMNEKG 461
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 180/379 (47%), Gaps = 34/379 (8%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G+ P + N L L S + +F +M E G +P+ ++G V DKG
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
EL+ ME V P+ +YN ++ C+ R D+ K+ ++M LVP+ VT+N+ I
Sbjct: 202 LELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISA 261
Query: 125 YCKVGEMEKAFSLKARMKAPN----AEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
CK G++ A + + M+ P+ ITYN +L G C G + DA+ +
Sbjct: 262 LCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTL-------- 313
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
F I +DD A SL+ +Y+ L G R G+ +A+ VL ++
Sbjct: 314 -----FESIRENDDLA------SLQ----------SYNIWLQGLVRHGKFIEAETVLKQM 352
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+ G+ PS SYNIL++ C G + A M+ G+ P VT+ L++ +C G+V
Sbjct: 353 TDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKV 412
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
D A+ +++M+ P T N L++ ++ + E+L ++ +KG + ++ +
Sbjct: 413 DAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNII 472
Query: 361 INCLCKDRKLLDA-EIVLG 378
++ LC +L A EIV G
Sbjct: 473 VDGLCGSGELDKAIEIVKG 491
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 160/362 (44%), Gaps = 55/362 (15%)
Query: 78 PSVFVYNLVLGGLCKVRRVKDARKLFDEM--LHRNLVPNTVTYNTL------IDGYCKVG 129
PS + + L + R+ K+ +E+ LH ++ +++ L + + K
Sbjct: 30 PSEESHGISLDATPTIARILVRAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSN 89
Query: 130 EMEKAFSL--KARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
++KAF R + P +PSV YN LL RV + +M G P ++
Sbjct: 90 HIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYT 149
Query: 188 RIVFDD---DSACSNGNGSLRANV---AARIDERTYSALLNGFCRVGRIEKAKEVLAKLV 241
+ DS+C + L + + +E T+ L+ G+C+ G +K E+L +
Sbjct: 150 FNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAME 209
Query: 242 ENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVD 301
GV+P+++ YN +V+++C EG + + + E+M E GL P VTFN+ I+ C+ G+V
Sbjct: 210 SFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVL 269
Query: 302 QAERWVKKM------------------LEKGIA---------------------PTLETY 322
A R M + KG +L++Y
Sbjct: 270 DASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSY 329
Query: 323 NSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMAS 382
N + G R F++ +L+++ KG+ P++ SY L++ LCK L DA+ ++G M
Sbjct: 330 NIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR 389
Query: 383 RG 384
G
Sbjct: 390 NG 391
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 128/310 (41%), Gaps = 30/310 (9%)
Query: 3 KDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLD 62
++ LP + + + L L + +F + +F +M+ ++PD V+Y + +
Sbjct: 517 ENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKIS 576
Query: 63 KGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLI 122
F ++ MEK+ S+ YN ++ GL ++ + L DEM + + PN TYNT I
Sbjct: 577 SAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAI 636
Query: 123 DGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFL 182
C+ ++E A +L M N P+V ++ L+ C + A+EV
Sbjct: 637 QYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEV---------- 686
Query: 183 PGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVE 242
F V S C G YS + N G++ KA E+L +++
Sbjct: 687 ---FETAV----SICGQKEG-------------LYSLMFNELLAAGQLLKATELLEAVLD 726
Query: 243 NGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQ 302
G Y LV + C + +E A +M +RG +I+ + G +
Sbjct: 727 RGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKE 786
Query: 303 AERWVKKMLE 312
A + KM+E
Sbjct: 787 ANSFADKMME 796
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 132/309 (42%), Gaps = 50/309 (16%)
Query: 36 MVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRR 95
++E+ PD+++ Y+ +L GLCK R
Sbjct: 515 LIENNCLPDLIT-----------------------------------YSTLLNGLCKAGR 539
Query: 96 VKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNC 155
+A+ LF EM+ L P++V YN I +CK G++ AF + M+ S+ TYN
Sbjct: 540 FAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNS 599
Query: 156 LLGGLCSSGRVNDAREVLVEMEGNGFLPG------GFSRIVFDD--DSACSNGNGSLRAN 207
L+ GL ++ + ++ EM+ G P + + + A + + ++ N
Sbjct: 600 LILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKN 659
Query: 208 VAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQIS--YNILVNAYCHEGYV 265
+A + ++ L+ FC+V + A+EV V + Q Y+++ N G +
Sbjct: 660 IAPNV--FSFKYLIEAFCKVPDFDMAQEVFETAVS---ICGQKEGLYSLMFNELLAAGQL 714
Query: 266 EKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSL 325
KA + E + +RG + + L+ C+ E++ A + KM+++G +
Sbjct: 715 LKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPV 774
Query: 326 INGYGRISN 334
I+G G++ N
Sbjct: 775 IDGLGKMGN 783
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 174 bits (441), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 180/370 (48%), Gaps = 29/370 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G++P V LF+ + K + +M GI+P+V Y +
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+++ ++ M+K V P+++ Y+ ++ G CK V+ A L+ E+L L+PN V + T
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L+DG+CK E+ A SL M +P++ YNCL+ G C SG + +A +L EME
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P F TY+ L+NG C ++ +A + K+
Sbjct: 370 LSPDVF-----------------------------TYTILINGLCIEDQVAEANRLFQKM 400
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+ PS +YN L++ YC E +E+A+ +M G++P+ +TF+TLI+ +C ++
Sbjct: 401 KNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDI 460
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
A +M KGI P + TY +LI+ + + +N + + ++ + G+ PN ++ L
Sbjct: 461 KAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACL 520
Query: 361 INCLCKDRKL 370
++ K+ +L
Sbjct: 521 VDGFWKEGRL 530
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 182/377 (48%), Gaps = 29/377 (7%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P ++ + LV ++F+ V + M+ G+ PDV Y + K +L
Sbjct: 162 PDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKL 221
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
+ M + P+V++Y + + LC+ ++++A K+F+ M ++PN TY+ +IDGYCK
Sbjct: 222 LDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCK 281
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
G + +A+ L + P+V+ + L+ G C + + AR + V M G P +
Sbjct: 282 TGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLY- 340
Query: 188 RIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVP 247
Y+ L++G C+ G + +A +L+++ + P
Sbjct: 341 ----------------------------VYNCLIHGHCKSGNMLEAVGLLSEMESLNLSP 372
Query: 248 SQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWV 307
+Y IL+N C E V +A + ++M+ + PS T+N+LI+ +C+ ++QA
Sbjct: 373 DVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLC 432
Query: 308 KKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKD 367
+M G+ P + T+++LI+GY + + + E+ KG+ P+V++Y +LI+ K+
Sbjct: 433 SEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKE 492
Query: 368 RKLLDAEIVLGDMASRG 384
+ +A + DM G
Sbjct: 493 ANMKEALRLYSDMLEAG 509
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 168/350 (48%), Gaps = 29/350 (8%)
Query: 6 VLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGF 65
+LP+V L + +++ ++F MV+ G+ P++ Y + ++ +
Sbjct: 300 LLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAV 359
Query: 66 ELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGY 125
L+ ME + P VF Y +++ GLC +V +A +LF +M + + P++ TYN+LI GY
Sbjct: 360 GLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGY 419
Query: 126 CKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGG 185
CK ME+A L + M A EP++IT++ L+ G C+ + A + EM G +P
Sbjct: 420 CKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVP-- 477
Query: 186 FSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGV 245
D TY+AL++ + +++A + + ++E G+
Sbjct: 478 ---------------------------DVVTYTALIDAHFKEANMKEALRLYSDMLEAGI 510
Query: 246 VPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAER 305
P+ ++ LV+ + EG + AI ++ ++ ++V F LI C+ G + +A R
Sbjct: 511 HPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASR 570
Query: 306 WVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVI 355
+ M GI P + +Y S++ G+ + + ++ K G+ PN++
Sbjct: 571 FFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLL 620
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 180/384 (46%), Gaps = 29/384 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+K GVLP++ + + + + + + ++ +++ + + P+VV +G V+ ++
Sbjct: 260 MKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARE 319
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L L M K V P+++VYN ++ G CK + +A L EM NL P+ TY
Sbjct: 320 LVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTI 379
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI+G C ++ +A L +MK PS TYN L+ G C + A ++ EM +G
Sbjct: 380 LINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASG 439
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P N+ T+S L++G+C V I+ A + ++
Sbjct: 440 VEP-----------------------NII------TFSTLIDGYCNVRDIKAAMGLYFEM 470
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
G+VP ++Y L++A+ E +++A++ M E G+ P+ TF L++ F + G +
Sbjct: 471 TIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRL 530
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
A + ++ ++ + LI G + ++ ++ G+ P++ SY S+
Sbjct: 531 SVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSM 590
Query: 361 INCLCKDRKLLDAEIVLGDMASRG 384
+ +++++ D ++ DM G
Sbjct: 591 LKGHLQEKRITDTMMLQCDMIKTG 614
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 194/383 (50%), Gaps = 21/383 (5%)
Query: 16 LFETLVGS----KQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCM 71
LF+ LV + ++ + F M E G P + + L ++ + M
Sbjct: 157 LFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADM 216
Query: 72 EKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEM 131
+ + +V+ +N+++ LCK ++K A+ M + P VTYNTL+ G+ G +
Sbjct: 217 YRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRI 276
Query: 132 EKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVF 191
E A + + MK+ +P + TYN +L +C+ GR A EVL EM+ G +P S +
Sbjct: 277 EGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNIL 333
Query: 192 DDDSACSNGNGSLRANVAARIDER----------TYSALLNGFCRVGRIEKAKEVLAKLV 241
CSN NG L A R DE TY+ L++G +IE A+ ++ ++
Sbjct: 334 I--RGCSN-NGDLEMAFAYR-DEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIR 389
Query: 242 ENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVD 301
E G+V ++YNIL+N YC G +KA ++M G++P+ T+ +LI C +
Sbjct: 390 EKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTR 449
Query: 302 QAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
+A+ +K++ KG+ P L N+L++G+ I N + F +L+E++ + P+ ++Y L+
Sbjct: 450 EADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLM 509
Query: 362 NCLCKDRKLLDAEIVLGDMASRG 384
LC + K +A ++G+M RG
Sbjct: 510 RGLCGEGKFEEARELMGEMKRRG 532
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 179/364 (49%), Gaps = 32/364 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+ G P +++ N + + + +VL +M E G+ PD VSY + D
Sbjct: 286 MKSKGFQPDMQTYNPILSWMCNEGRASEVLR---EMKEIGLVPDSVSYNILIRGCSNNGD 342
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L+ F M K+ + P+ + YN ++ GL +++ A L E+ + +V ++VTYN
Sbjct: 343 LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 402
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI+GYC+ G+ +KAF+L M +P+ TY L+ LC + +A E+ ++ G G
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG 462
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P D + L++G C +G +++A +L ++
Sbjct: 463 MKP-----------------------------DLVMMNTLMDGHCAIGNMDRAFSLLKEM 493
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+ P ++YN L+ C EG E+A + +M+ RG+KP ++++NTLI+ + + G+
Sbjct: 494 DMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDT 553
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
A +ML G PTL TYN+L+ G + E+L E++ +G+ PN S+ S+
Sbjct: 554 KHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSV 613
Query: 361 INCL 364
I +
Sbjct: 614 IEAM 617
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 185/372 (49%), Gaps = 17/372 (4%)
Query: 20 LVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPS 79
L +K F ++ VF GI+P +V+Y V+ + ++ ++ M+ + P
Sbjct: 241 LKKAKGFLGIMEVF------GIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPD 294
Query: 80 VFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKA 139
+ YN +L +C R A ++ EM LVP++V+YN LI G G++E AF+ +
Sbjct: 295 MQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRD 351
Query: 140 RMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSN 199
M P+ TYN L+ GL ++ A ++ E+ G + + + + C +
Sbjct: 352 EMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILIN-GYCQH 410
Query: 200 GNG----SLRANVAA---RIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISY 252
G+ +L + + + TY++L+ CR + +A E+ K+V G+ P +
Sbjct: 411 GDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMM 470
Query: 253 NILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLE 312
N L++ +C G +++A ++M+ + P VT+N L+ C G+ ++A + +M
Sbjct: 471 NTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKR 530
Query: 313 KGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLD 372
+GI P +YN+LI+GY + + F + +E+ G P +++Y +L+ L K+++
Sbjct: 531 RGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGEL 590
Query: 373 AEIVLGDMASRG 384
AE +L +M S G
Sbjct: 591 AEELLREMKSEG 602
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 163/321 (50%), Gaps = 27/321 (8%)
Query: 79 SVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLK 138
S +++L++ C++R V +A + F M + P T T N ++ ++ +E A+
Sbjct: 154 STILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFY 213
Query: 139 ARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG--GFSRIVFDDDSA 196
A M + +V T+N ++ LC G++ A+ L ME G P ++ +V
Sbjct: 214 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLV------ 267
Query: 197 CSNGNGSLRANV-AARI------------DERTYSALLNGFCRVGRIEKAKEVLAKLVEN 243
SLR + AR+ D +TY+ +L+ C GR A EVL ++ E
Sbjct: 268 ---QGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEI 321
Query: 244 GVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQA 303
G+VP +SYNIL+ + G +E A ++M ++G+ P++ T+NTLI+ +++ A
Sbjct: 322 GLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAA 381
Query: 304 ERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINC 363
E ++++ EKGI TYN LINGY + + K F + +E+ G++P +Y SLI
Sbjct: 382 EILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYV 441
Query: 364 LCKDRKLLDAEIVLGDMASRG 384
LC+ K +A+ + + +G
Sbjct: 442 LCRKNKTREADELFEKVVGKG 462
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 174/366 (47%), Gaps = 29/366 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K G PS+ ++ L +F++ +++ M G P+VV Y + +D
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L+ E+ CMEK+ + YN ++ GL R DA +L +M+ R + PN + +
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LID + K G + +A +L M + P+V TYN L+ G C G + DA+ + M G
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P D TY+ L+ GFC+ R+E ++ ++
Sbjct: 320 CFP-----------------------------DVVTYNTLITGFCKSKRVEDGMKLFCEM 350
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
G+V +YN L++ YC G + A + +M + G+ P VT+N L++ C G++
Sbjct: 351 TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKI 410
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
++A V+ + + + + TYN +I G R + + + + +KG+KP+ I+Y ++
Sbjct: 411 EKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITM 470
Query: 361 INCLCK 366
I+ LC+
Sbjct: 471 ISGLCR 476
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 188/387 (48%), Gaps = 12/387 (3%)
Query: 7 LPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFE 66
+PS+ R+ + +F+ V+ ++ M GI D+ S+ + L
Sbjct: 76 IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALA 135
Query: 67 LMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYC 126
L+G M K PS+ +L G C+ R ++A L D M VPN V YNT+I+G C
Sbjct: 136 LLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLC 195
Query: 127 KVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG-- 184
K ++ A + M+ +TYN L+ GL +SGR DA +L +M P
Sbjct: 196 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 255
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDER-------TYSALLNGFCRVGRIEKAKEVL 237
F+ ++ D+ GN N+ + R TY++L+NGFC G + AK +
Sbjct: 256 FFTALI---DTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF 312
Query: 238 AKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCET 297
+V G P ++YN L+ +C VE ++ +M +GL T+NTLI+ +C+
Sbjct: 313 DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQA 372
Query: 298 GEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISY 357
G+++ A++ +M++ G++P + TYN L++ K ++E+++K M ++I+Y
Sbjct: 373 GKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITY 432
Query: 358 GSLINCLCKDRKLLDAEIVLGDMASRG 384
+I LC+ KL +A + + +G
Sbjct: 433 NIIIQGLCRTDKLKEAWCLFRSLTRKG 459
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 182/362 (50%), Gaps = 6/362 (1%)
Query: 25 QFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYN 84
+F+ ++F +M++S P +V + + + + D L ME + ++ +
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 85 LVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAP 144
+++ C+ R+ A L +M+ P+ VT +L++G+C+ ++A SL M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 145 NAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGG--FSRIV--FDDDSACSNG 200
P+V+ YN ++ GLC + +N+A EV ME G ++ ++ + ++
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 201 NGSLRANVAARIDERT--YSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNA 258
LR V +ID ++AL++ F + G + +A+ + +++ VVP+ +YN L+N
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 259 YCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPT 318
+C G + A + M +G P VT+NTLI FC++ V+ + +M +G+
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358
Query: 319 LETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLG 378
TYN+LI+GY + ++ + G+ P++++Y L++CLC + K+ A +++
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418
Query: 379 DM 380
D+
Sbjct: 419 DL 420
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 167/347 (48%), Gaps = 29/347 (8%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSY----------GKAVEA 54
G +P+V N + L ++ L VF M + GIR D V+Y G+ +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 55 AVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPN 114
A +L+D M K ++ P+V + ++ K + +AR L+ EM+ R++VPN
Sbjct: 239 ARLLRD----------MVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPN 288
Query: 115 TVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLV 174
TYN+LI+G+C G + A + M + P V+TYN L+ G C S RV D ++
Sbjct: 289 VFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFC 348
Query: 175 EMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARI-------DERTYSALLNGFCRV 227
EM G + F+ C G ++ V R+ D TY+ LL+ C
Sbjct: 349 EMTYQGLVGDAFTYNTLIH-GYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNN 407
Query: 228 GRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTF 287
G+IEKA ++ L ++ + I+YNI++ C +++A + +G+KP + +
Sbjct: 408 GKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAY 467
Query: 288 NTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYN-SLINGYGRIS 333
T+I+ C G +A++ ++M E G P+ Y+ +L + Y +S
Sbjct: 468 ITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLS 514
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 74/154 (48%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G++ + N L + + VF MV+ G+ PD+V+Y ++
Sbjct: 350 MTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGK 409
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
++K ++ ++K + + YN+++ GLC+ ++K+A LF + + + P+ + Y T
Sbjct: 410 IEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYIT 469
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYN 154
+I G C+ G +A L RMK PS Y+
Sbjct: 470 MISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 87/187 (46%)
Query: 198 SNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVN 257
+N SL + + Y L + + A + +++++ +PS + + ++
Sbjct: 28 NNPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLT 87
Query: 258 AYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAP 317
+ I +ME G+ +F LI+ FC + A + KM++ G P
Sbjct: 88 VIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRP 147
Query: 318 TLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVL 377
++ T SL+NG+ + + F + +++ ++ G PNV+ Y ++IN LCK+R L +A V
Sbjct: 148 SIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVF 207
Query: 378 GDMASRG 384
M +G
Sbjct: 208 YCMEKKG 214
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 179/372 (48%), Gaps = 11/372 (2%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
MR+ G + S N L E F+ V +M+ +GI P +Y + A
Sbjct: 299 MRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGR 358
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D EL+ M P V YN ++ G K+ + +A LFD++ ++ P+ VTYNT
Sbjct: 359 IDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNT 414
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LIDG C+ G +E A LK M P VITY L+ G +G ++ A EV EM G
Sbjct: 415 LIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG 474
Query: 181 FLPGGFS-------RIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKA 233
P G++ + D + + A D Y+ ++G C+VG + KA
Sbjct: 475 IKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKA 534
Query: 234 KEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINK 293
E K+ G+VP ++Y ++ Y G + A ++M + L PS +T+ LI
Sbjct: 535 IEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYG 594
Query: 294 FCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPN 353
+ G ++QA ++ +M ++G+ P + T+N+L+ G + N + + L ++E++G+ PN
Sbjct: 595 HAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPN 654
Query: 354 VISYGSLINCLC 365
SY LI+ C
Sbjct: 655 KYSYTMLISKNC 666
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 117/457 (25%), Positives = 210/457 (45%), Gaps = 73/457 (15%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G LPSVR+ N + + L S+ K AV+ M+E GI P V+++ +++ D
Sbjct: 194 MIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGD 253
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L++ ++ M++ + S YN+++ G K ++++AR+ +M ++N
Sbjct: 254 LERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNP 313
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEG-- 178
LI+GYCK G + A+ + M P+ TYN + LC GR++DARE+L M
Sbjct: 314 LIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPD 373
Query: 179 --------NGFLP-GGF--SRIVFDD-----------------DSACSNGN----GSLRA 206
+G++ G F + ++FDD D C +GN L+
Sbjct: 374 VVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKE 433
Query: 207 NVAARI---DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQIS------------ 251
+ ++ D TY+ L+ GF + G + A EV +++ G+ P +
Sbjct: 434 EMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLG 493
Query: 252 ------------------------YNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTF 287
YN+ ++ C G + KAI+ ++ GL P +VT+
Sbjct: 494 DSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTY 553
Query: 288 NTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEK 347
T+I + E G+ A +ML K + P++ TY LI G+ + + F+ E++K
Sbjct: 554 TTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKK 613
Query: 348 KGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+G++PNV+++ +L+ +CK + +A L M G
Sbjct: 614 RGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEG 650
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 129/268 (48%), Gaps = 16/268 (5%)
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
Y K EK +M PSV N +L L S +N A V M +G +P
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMP- 236
Query: 185 GFSRIVFDD--DSACSNGNGSLRANVAARIDER-------TYSALLNGFCRVGRIEKAKE 235
+ I F+ DS G+ + + R TY+ L+NGF + G++E+A+
Sbjct: 237 --TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARR 294
Query: 236 VLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFC 295
+ +G + S+N L+ YC +G + A ++M G+ P+ T+N I C
Sbjct: 295 FHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALC 354
Query: 296 ETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVI 355
+ G +D A +++L AP + +YN+L++GY ++ FV+ + +++ + P+++
Sbjct: 355 DFGRIDDA----RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIV 410
Query: 356 SYGSLINCLCKDRKLLDAEIVLGDMASR 383
+Y +LI+ LC+ L A+ + +M ++
Sbjct: 411 TYNTLIDGLCESGNLEGAQRLKEEMTTQ 438
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 3/168 (1%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G++P + + + + QF+ ++ +M+ + P V++Y + L++
Sbjct: 545 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQA 604
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
F+ M+K V P+V +N +L G+CK + +A + +M + PN +Y LI
Sbjct: 605 FQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISK 664
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREV 172
C + E+ L M EP T+ L L + +++REV
Sbjct: 665 NCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL---EKDHESREV 709
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 72/154 (46%)
Query: 231 EKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTL 290
EK K++ G +PS + NI++ + KA E M E G+ P+ +TFNT+
Sbjct: 185 EKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTM 244
Query: 291 INKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGM 350
++ + G++++ ++ +M + I + TYN LING+ + + ++ + G
Sbjct: 245 LDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGF 304
Query: 351 KPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
S+ LI CK DA V +M + G
Sbjct: 305 AVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAG 338
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 67/126 (53%)
Query: 259 YCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPT 318
Y + EK + + E+M +G PS N ++ ++ +++A + M+E GI PT
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 237
Query: 319 LETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLG 378
+ T+N++++ + + + +I E++++ ++ + ++Y LIN K+ K+ +A G
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297
Query: 379 DMASRG 384
DM G
Sbjct: 298 DMRRSG 303
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 61/122 (50%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + + PSV + L + + E+ T+M + G+RP+V+++ + +
Sbjct: 576 MLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGN 635
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D+ + + ME+E + P+ + Y +++ C + ++ KL+ EML + + P+ T+
Sbjct: 636 IDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRA 695
Query: 121 LI 122
L
Sbjct: 696 LF 697
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 172/373 (46%), Gaps = 33/373 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G+ P V + N L L + + A+ MV G+ DVV+YG V + D
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 276
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L+ ME+ + P V +Y+ ++ LCK DA+ LF EML + + PN TYN
Sbjct: 277 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 336
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+IDG+C G A L M P V+T+N L+ G++ +A ++ EM
Sbjct: 337 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 396
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P D TY++++ GFC+ R + AK + +
Sbjct: 397 IFP-----------------------------DTVTYNSMIYGFCKHNRFDDAKHMFDLM 427
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
P +++N +++ YC V++ +Q ++ RGL + T+NTLI+ FCE +
Sbjct: 428 AS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
+ A+ ++M+ G+ P T N L+ G+ + E+ E I+ + + ++Y +
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 543
Query: 361 INCLCKDRKLLDA 373
I+ +CK K+ +A
Sbjct: 544 IHGMCKGSKVDEA 556
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 184/384 (47%), Gaps = 53/384 (13%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
+ K G P V + N L L + + LA+F MVE+G V + + VE +
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT--- 223
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
P V +N ++ GLC RV +A L ++M+ + L + VTY T
Sbjct: 224 -----------------PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+++G CK+G+ + A +L ++M+ + +P V+ Y+ ++ LC G +DA+ + EM G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P F TY+ +++GFC GR A+ +L +
Sbjct: 327 IAPNVF-----------------------------TYNCMIDGFCSFGRWSDAQRLLRDM 357
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+E + P +++N L++A EG + +A + ++M R + P VT+N++I FC+
Sbjct: 358 IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF 417
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
D A K M + +P + T+N++I+ Y R + ++L EI ++G+ N +Y +L
Sbjct: 418 DDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 361 INCLCKDRKLLDAEIVLGDMASRG 384
I+ C+ L A+ + +M S G
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHG 497
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 169/374 (45%), Gaps = 44/374 (11%)
Query: 24 KQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVY 83
K + + F MV S V K + V + D L ME R+ +++ +
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 84 NLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKA---- 139
N+++ C ++ + F ++ P+ VT+NTL+ G C + +A +L
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 140 -----------RMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSR 188
+M P VIT+N L+ GLC GRV +A ++ +M G G
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL------- 257
Query: 189 IVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPS 248
ID TY ++NG C++G + A +L+K+ E + P
Sbjct: 258 ----------------------HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPD 295
Query: 249 QISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVK 308
+ Y+ +++ C +G+ A +M E+G+ P+ T+N +I+ FC G A+R ++
Sbjct: 296 VVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLR 355
Query: 309 KMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDR 368
M+E+ I P + T+N+LI+ + + ++ +E+ + + P+ ++Y S+I CK
Sbjct: 356 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415
Query: 369 KLLDAEIVLGDMAS 382
+ DA+ + MAS
Sbjct: 416 RFDDAKHMFDLMAS 429
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 160/326 (49%), Gaps = 14/326 (4%)
Query: 58 LKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVT 117
K LD + M + R + N V+G ++ R A L+ +M R + N +
Sbjct: 84 FKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYS 143
Query: 118 YNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEME 177
+N LI +C ++ + S ++ +P V+T+N LL GLC R+++A + M
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 178 GNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVL 237
GFL + +FD + T++ L+NG C GR+ +A ++
Sbjct: 204 ETGFLE---AVALFDQ-----------MVEIGLTPVVITFNTLINGLCLEGRVLEAAALV 249
Query: 238 AKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCET 297
K+V G+ ++Y +VN C G + A+ +MEE +KP V ++ +I++ C+
Sbjct: 250 NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKD 309
Query: 298 GEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISY 357
G A+ +MLEKGIAP + TYN +I+G+ + +L ++ ++ + P+V+++
Sbjct: 310 GHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF 369
Query: 358 GSLINCLCKDRKLLDAEIVLGDMASR 383
+LI+ K+ KL +AE + +M R
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHR 395
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 155/322 (48%), Gaps = 10/322 (3%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G+ P+V + N + + ++ + DM+E I PDV+++ + A+V
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L + +L M + P YN ++ G CK R DA+ +FD M P+ VT+NT
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNT 437
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+ID YC+ +++ L + + TYN L+ G C +N A+++ EM +G
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Query: 181 FLPGGFSRIV----FDDDSACSNGNGSLRANVAARIDERT--YSALLNGFCRVGRIEKAK 234
P + + F ++ ++ID T Y+ +++G C+ ++++A
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
++ L +GV P +YN++++ +C + + A +M++ G +P T+NTLI
Sbjct: 558 DLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGC 617
Query: 295 CETGEVDQAERWVKKMLEKGIA 316
+ GE+D++ + +M G +
Sbjct: 618 LKAGEIDKSIELISEMRSNGFS 639
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 128/291 (43%), Gaps = 49/291 (16%)
Query: 94 RRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITY 153
+ + DA FD M+ V N +I + ++ + A SL +M+ ++ ++
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 154 NCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARID 213
N L+ C +++ + ++ GF P D
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQP-----------------------------D 175
Query: 214 ERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAE 273
T++ LL+G C RI +A + +VE G + +A+ +
Sbjct: 176 VVTFNTLLHGLCLEDRISEALALFGYMVETGFL--------------------EAVALFD 215
Query: 274 QMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRIS 333
QM E GL P +TFNTLIN C G V +A V KM+ KG+ + TY +++NG ++
Sbjct: 216 QMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMG 275
Query: 334 NFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ +L ++E+ +KP+V+ Y ++I+ LCKD DA+ + +M +G
Sbjct: 276 DTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 87/187 (46%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
+ + G++ + + N L +F +M+ G+ PD ++ + +
Sbjct: 458 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 517
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L++ EL ++ ++ YN+++ G+CK +V +A LF + + P+ TYN
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+I G+C + A L +MK EP TYN L+ G +G ++ + E++ EM NG
Sbjct: 578 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637
Query: 181 FLPGGFS 187
F F+
Sbjct: 638 FSGDAFT 644
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 170/338 (50%), Gaps = 42/338 (12%)
Query: 48 YGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEML 107
Y +A E M K L GF L +G S+ + G C+ ++DA K+FD M
Sbjct: 210 YTEAAEM-FMSKILKIGFVL-----DSHIGTSLLL------GFCRGLNLRDALKVFDVMS 257
Query: 108 HR-NLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRV 166
PN+V+Y+ LI G C+VG +E+AF LK +M +PS TY L+ LC G +
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317
Query: 167 NDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCR 226
+ A + EM G P NV TY+ L++G CR
Sbjct: 318 DKAFNLFDEMIPRGCKP-----------------------NV------HTYTVLIDGLCR 348
Query: 227 VGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVT 286
G+IE+A V K+V++ + PS I+YN L+N YC +G V A + ME+R KP+ T
Sbjct: 349 DGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRT 408
Query: 287 FNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIE 346
FN L+ C G+ +A +K+ML+ G++P + +YN LI+G R + +++L +
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN 468
Query: 347 KKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
++P+ +++ ++IN CK K A LG M +G
Sbjct: 469 CFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKG 506
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 193/397 (48%), Gaps = 20/397 (5%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G PS R+ L + L +K +F +M+ G +P+V +Y ++
Sbjct: 292 MGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGK 351
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+++ + M K+R+ PSV YN ++ G CK RV A +L M R PN T+N
Sbjct: 352 IEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNE 411
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L++G C+VG+ KA L RM P +++YN L+ GLC G +N A ++L M
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFD 471
Query: 181 FLPG--GFSRIVFDDDSACSNGNGSLRANVAA-----------RIDERTYSALLNGFCRV 227
P F+ I+ ++ C G +A+VA+ +DE T + L++G C+V
Sbjct: 472 IEPDCLTFTAII---NAFCKQG----KADVASAFLGLMLRKGISLDEVTGTTLIDGVCKV 524
Query: 228 GRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTF 287
G+ A +L LV+ ++ + S N++++ V++ + ++ + GL PS VT+
Sbjct: 525 GKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTY 584
Query: 288 NTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEK 347
TL++ +G++ + R ++ M G P + Y +ING + + ++L ++
Sbjct: 585 TTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQD 644
Query: 348 KGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
G+ PN ++Y ++ + KL A + M RG
Sbjct: 645 SGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 186/384 (48%), Gaps = 8/384 (2%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P+ S + L L + E+ + M E G +P +Y ++A +DK F L
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
M P+V Y +++ GLC+ ++++A + +M+ + P+ +TYN LI+GYCK
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK 383
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
G + AF L M+ +P+V T+N L+ GLC G+ A +L M NG P S
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVS 443
Query: 188 RIVFDDDSACSNGNGSLRANVAARI-------DERTYSALLNGFCRVGRIEKAKEVLAKL 240
V D C G+ + + + + D T++A++N FC+ G+ + A L +
Sbjct: 444 YNVL-IDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLM 502
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+ G+ +++ L++ C G A+ E + + + + + N +++ + +V
Sbjct: 503 LRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKV 562
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
+ + K+ + G+ P++ TY +L++G R + F ILE ++ G PNV Y +
Sbjct: 563 KEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTII 622
Query: 361 INCLCKDRKLLDAEIVLGDMASRG 384
IN LC+ ++ +AE +L M G
Sbjct: 623 INGLCQFGRVEEAEKLLSAMQDSG 646
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 138/280 (49%), Gaps = 11/280 (3%)
Query: 114 NTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVL 173
N Y++L+ K+ A+ RM+A +I Y ++ LC +G A +
Sbjct: 159 NYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFM 218
Query: 174 VEMEGNGF---------LPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGF 224
++ GF L GF R + D+ + V + +YS L++G
Sbjct: 219 SKILKIGFVLDSHIGTSLLLGFCRGLNLRDAL--KVFDVMSKEVTCAPNSVSYSILIHGL 276
Query: 225 CRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSY 284
C VGR+E+A + ++ E G PS +Y +L+ A C G ++KA ++M RG KP+
Sbjct: 277 CEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNV 336
Query: 285 VTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEE 344
T+ LI+ C G++++A +KM++ I P++ TYN+LINGY + V FE+L
Sbjct: 337 HTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTV 396
Query: 345 IEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+EK+ KPNV ++ L+ LC+ K A +L M G
Sbjct: 397 MEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 181/455 (39%), Gaps = 118/455 (25%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K P+VR+ N L E L + K + + M+++G+ PD+VSY ++
Sbjct: 397 MEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGH 456
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
++ ++L+ M + P + ++ CK + A ML + + + VT T
Sbjct: 457 MNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTT 516
Query: 121 LIDGYCKVGEMEKA-FSLKARMK-----APNA---------------------------- 146
LIDG CKVG+ A F L+ +K P++
Sbjct: 517 LIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLG 576
Query: 147 -EPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLR 205
PSV+TY L+ GL SG + + +L M+ +G LP +
Sbjct: 577 LVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYP------------------ 618
Query: 206 ANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCH---- 261
Y+ ++NG C+ GR+E+A+++L+ + ++GV P+ ++Y ++V Y +
Sbjct: 619 -----------YTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKL 667
Query: 262 --------------------------EGYV--EKAIQTAEQ-----MEERGLKPSYVT-- 286
+G+V +K I +E+ + R P +
Sbjct: 668 DRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINEL 727
Query: 287 --------------FNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRI 332
L+ + C+ G D++ V+ +LE+G+ + + ++ Y
Sbjct: 728 ISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLE-KAMDIIMESYCSK 786
Query: 333 SNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKD 367
KC E++ + K G P+ S+ +I L K+
Sbjct: 787 KKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKE 821
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 163/359 (45%), Gaps = 27/359 (7%)
Query: 6 VLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGF 65
+L + S+N + + L + ++ LA+ + + G+ P VV+Y V+ + D+ F
Sbjct: 542 ILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSF 601
Query: 66 ELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGY 125
++ M+ P+V+ Y +++ GLC+ RV++A KL M + PN VTY ++ GY
Sbjct: 602 RILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661
Query: 126 CKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGG 185
G++++A M E + Y+ LL G S + D E
Sbjct: 662 VNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSE-----------EST 710
Query: 186 FSRIVF-DDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
S I + D C N S+ + I L+ C+ GR +++ +++ ++E G
Sbjct: 711 VSDIALRETDPECINELISVVEQLGGCISGLCI-FLVTRLCKEGRTDESNDLVQNVLERG 769
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
V + + +I++ +YC + K ++ + + G PS+ +F +I + G+ ++A
Sbjct: 770 VFLEK-AMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERAR 828
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINC 363
V ++L T N ++ G ++ +V+C L E ++ G VI ++C
Sbjct: 829 ELVMELL---------TSNGVVEKSGVLT-YVEC---LMEGDETGDCSEVIDLVDQLHC 874
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 177/384 (46%), Gaps = 33/384 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G+ P V + N L L + + A+ MV G+ DVV+YG V + D
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 276
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L+ ME+ + P V +Y+ ++ LCK DA+ LF EML + + PN TYN
Sbjct: 277 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 336
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+IDG+C G A L M P V+T+N L+ G++ +A ++ EM
Sbjct: 337 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM---- 392
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
R +F D TY++++ GFC+ R + AK + +
Sbjct: 393 -----LHRCIFPDTV--------------------TYNSMIYGFCKHNRFDDAKHMFDLM 427
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
P +++N +++ YC V++ +Q ++ RGL + T+NTLI+ FCE +
Sbjct: 428 AS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
+ A+ ++M+ G+ P T N L+ G+ + E+ E I+ + + ++Y +
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 543
Query: 361 INCLCKDRKLLDAEIVLGDMASRG 384
I+ +CK K+ +A + + G
Sbjct: 544 IHGMCKGSKVDEAWDLFCSLPIHG 567
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 184/384 (47%), Gaps = 53/384 (13%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
+ K G P V + N L L + + LA+F MVE+G V + + VE +
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT--- 223
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
P V +N ++ GLC RV +A L ++M+ + L + VTY T
Sbjct: 224 -----------------PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+++G CK+G+ + A +L ++M+ + +P V+ Y+ ++ LC G +DA+ + EM G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P F TY+ +++GFC GR A+ +L +
Sbjct: 327 IAPNVF-----------------------------TYNCMIDGFCSFGRWSDAQRLLRDM 357
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+E + P +++N L++A EG + +A + ++M R + P VT+N++I FC+
Sbjct: 358 IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF 417
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
D A K M + +P + T+N++I+ Y R + ++L EI ++G+ N +Y +L
Sbjct: 418 DDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 361 INCLCKDRKLLDAEIVLGDMASRG 384
I+ C+ L A+ + +M S G
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHG 497
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 179/397 (45%), Gaps = 50/397 (12%)
Query: 7 LPSVRSVNRLFETL---VGSKQFEKV---LAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
LPS+ V E L GS F+ + + F MV S V K + V +
Sbjct: 62 LPSLTQVTFEGEELKLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNR 121
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
D L ME R+ +++ +N+++ C ++ + F ++ P+ VT+NT
Sbjct: 122 PDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNT 181
Query: 121 LIDGYCKVGEMEKAFSLKA---------------RMKAPNAEPSVITYNCLLGGLCSSGR 165
L+ G C + +A +L +M P VIT+N L+ GLC GR
Sbjct: 182 LLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGR 241
Query: 166 VNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFC 225
V +A ++ +M G G ID TY ++NG C
Sbjct: 242 VLEAAALVNKMVGKGL-----------------------------HIDVVTYGTIVNGMC 272
Query: 226 RVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYV 285
++G + A +L+K+ E + P + Y+ +++ C +G+ A +M E+G+ P+
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Query: 286 TFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEI 345
T+N +I+ FC G A+R ++ M+E+ I P + T+N+LI+ + + ++ +E+
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Query: 346 EKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMAS 382
+ + P+ ++Y S+I CK + DA+ + MAS
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 160/326 (49%), Gaps = 14/326 (4%)
Query: 58 LKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVT 117
K LD + M + R + N V+G ++ R A L+ +M R + N +
Sbjct: 84 FKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYS 143
Query: 118 YNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEME 177
+N LI +C ++ + S ++ +P V+T+N LL GLC R+++A + M
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 178 GNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVL 237
GFL + +FD + T++ L+NG C GR+ +A ++
Sbjct: 204 ETGFLE---AVALFDQ-----------MVEIGLTPVVITFNTLINGLCLEGRVLEAAALV 249
Query: 238 AKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCET 297
K+V G+ ++Y +VN C G + A+ +MEE +KP V ++ +I++ C+
Sbjct: 250 NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKD 309
Query: 298 GEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISY 357
G A+ +MLEKGIAP + TYN +I+G+ + +L ++ ++ + P+V+++
Sbjct: 310 GHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF 369
Query: 358 GSLINCLCKDRKLLDAEIVLGDMASR 383
+LI+ K+ KL +AE + +M R
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHR 395
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 142/348 (40%), Gaps = 43/348 (12%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G+ P+V + N + + ++ + DM+E I PDV+++ + A+V
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFD---------------- 104
L + +L M + P YN ++ G CK R DA+ +FD
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDV 441
Query: 105 ---------------EMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPS 149
E+ R LV NT TYNTLI G+C+V + A L M + P
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 150 VITYNCLLGGLCSSGRVNDAREVL--VEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRAN 207
IT N LL G C + ++ +A E+ ++M ++ I+ C +
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII---HGMCKGSKVDEAWD 558
Query: 208 VAARI-------DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYC 260
+ + D +TY+ +++GFC I A + K+ +NG P +YN L+
Sbjct: 559 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL 618
Query: 261 HEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVK 308
G ++K+I+ +M G T C + + E +++
Sbjct: 619 KAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSDEEIIENYLR 666
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 128/291 (43%), Gaps = 49/291 (16%)
Query: 94 RRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITY 153
+ + DA FD M+ V N +I + ++ + A SL +M+ ++ ++
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 154 NCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARID 213
N L+ C +++ + ++ GF P D
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQP-----------------------------D 175
Query: 214 ERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAE 273
T++ LL+G C RI +A + +VE G + +A+ +
Sbjct: 176 VVTFNTLLHGLCLEDRISEALALFGYMVETGFL--------------------EAVALFD 215
Query: 274 QMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRIS 333
QM E GL P +TFNTLIN C G V +A V KM+ KG+ + TY +++NG ++
Sbjct: 216 QMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMG 275
Query: 334 NFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ +L ++E+ +KP+V+ Y ++I+ LCKD DA+ + +M +G
Sbjct: 276 DTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 192/385 (49%), Gaps = 12/385 (3%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P + +RLF + +KQ++ VL + M GI ++ + + + L F
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
MG + K P ++ ++ GLC RV +A +L D M+ P +T N L++G C
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGG-- 185
G++ A L RM +P+ +TY +L +C SG+ A E+L +ME
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 186 FSRIVFDDDSACSNGNGSLRANV-------AARIDERTYSALLNGFCRVGRIEKAKEVLA 238
+S I+ D C +G+ N+ + D Y+ L+ GFC GR + ++L
Sbjct: 250 YSIII---DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLR 306
Query: 239 KLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETG 298
+++ + P ++++ L++ + EG + +A + ++M +RG+ P VT+ +LI+ FC+
Sbjct: 307 DMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKEN 366
Query: 299 EVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYG 358
++D+A + M+ KG P + T+N LINGY + + E+ ++ +G+ + ++Y
Sbjct: 367 QLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYN 426
Query: 359 SLINCLCKDRKLLDAEIVLGDMASR 383
+LI C+ KL A+ + +M SR
Sbjct: 427 TLIQGFCELGKLEVAKELFQEMVSR 451
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 182/380 (47%), Gaps = 29/380 (7%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G P++ ++N L L + + + + MVE+G +P+ V+YG ++
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
EL+ ME+ ++ Y++++ GLCK + +A LF+EM + + + Y TLI G
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
+C G + L M P V+ ++ L+ G++ +A E+ EM G P
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP- 350
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
D TY++L++GFC+ +++KA +L +V G
Sbjct: 351 ----------------------------DTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
P+ ++NIL+N YC ++ ++ +M RG+ VT+NTLI FCE G+++ A+
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
++M+ + + P + +Y L++G K EI E+IEK M+ ++ Y +I+ +
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 365 CKDRKLLDAEIVLGDMASRG 384
C K+ DA + + +G
Sbjct: 503 CNASKVDDAWDLFCSLPLKG 522
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 170/346 (49%), Gaps = 29/346 (8%)
Query: 16 LFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKER 75
+ + L + +F +M G + D++ Y + D G +L+ M K +
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 76 VGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAF 135
+ P V ++ ++ K ++++A +L EM+ R + P+TVTY +LIDG+CK +++KA
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 136 SLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDS 195
+ M + P++ T+N L+ G C + ++D E+ +M
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM------------------- 413
Query: 196 ACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNIL 255
SLR VA D TY+ L+ GFC +G++E AKE+ ++V V P +SY IL
Sbjct: 414 -------SLRGVVA---DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKIL 463
Query: 256 VNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGI 315
++ C G EKA++ E++E+ ++ +N +I+ C +VD A + KG+
Sbjct: 464 LDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 523
Query: 316 APTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
P ++TYN +I G + + + + ++E+ G PN +Y LI
Sbjct: 524 KPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 183/370 (49%), Gaps = 30/370 (8%)
Query: 15 RLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKE 74
RL +V K+ + V +F +M S RP ++ + + K D +L ME +
Sbjct: 43 RLRSGIVDIKEDDAV-DLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELK 101
Query: 75 RVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKA 134
+ +++ ++++ C+ R++ A +++ P+TVT++TLI+G C G + +A
Sbjct: 102 GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEA 161
Query: 135 FSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDD 194
L RM +P++IT N L+ GLC +G+V+DA ++ M GF P
Sbjct: 162 LELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQP----------- 210
Query: 195 SACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNI 254
+E TY +L C+ G+ A E+L K+ E + + Y+I
Sbjct: 211 ------------------NEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSI 252
Query: 255 LVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKG 314
+++ C +G ++ A +ME +G K + + TLI FC G D + ++ M+++
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 315 IAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAE 374
I P + +++LI+ + + + E+ +E+ ++G+ P+ ++Y SLI+ CK+ +L A
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 375 IVLGDMASRG 384
+L M S+G
Sbjct: 373 HMLDLMVSKG 382
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 154/327 (47%), Gaps = 29/327 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K + P V + + L + V + + + +M++ GI PD V+Y ++
Sbjct: 308 MIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
LDK ++ M + GP++ +N+++ G CK + D +LF +M R +V +TVTYNT
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI G+C++G++E A L M + P +++Y LL GLC +G A E+ ++E +
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
+D Y+ +++G C +++ A ++ L
Sbjct: 488 M-----------------------------ELDIGIYNIIIHGMCNASKVDDAWDLFCSL 518
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
GV P +YNI++ C +G + +A +MEE G P+ T+N LI G+
Sbjct: 519 PLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDA 578
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLIN 327
++ + ++++ G + T +++
Sbjct: 579 TKSAKLIEEIKRCGFSVDASTVKMVVD 605
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 189/376 (50%), Gaps = 19/376 (5%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M++DG P+V + N L + L + + + + +M G PD VSY + + +
Sbjct: 172 MKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGL 231
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ +G EL ER P V VYN ++ GLCK K A +L EM+ + + PN ++Y+T
Sbjct: 232 VKEGREL-----AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYST 286
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEM-EGN 179
LI+ C G++E AFS +M P++ T + L+ G G DA ++ +M G
Sbjct: 287 LINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGF 346
Query: 180 GFLPG--GFSRIVFDDDSACSNGNGSLRANVAARIDE-------RTYSALLNGFCRVGRI 230
G P ++ +V CS+GN +V + ++E RTY +L+NGF + G +
Sbjct: 347 GLQPNVVAYNTLV---QGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSL 403
Query: 231 EKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTL 290
+ A + K++ +G P+ + Y +V A C ++A E M + PS TFN
Sbjct: 404 DGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAF 463
Query: 291 INKFCETGEVDQAERWVKKMLEKG-IAPTLETYNSLINGYGRISNFVKCFEILEEIEKKG 349
I C+ G +D AE+ ++M ++ P + TYN L++G + + + + + EI +G
Sbjct: 464 IKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRG 523
Query: 350 MKPNVISYGSLINCLC 365
++ + +Y +L++ C
Sbjct: 524 VEWSSSTYNTLLHGSC 539
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 179/393 (45%), Gaps = 53/393 (13%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
+++ G PSV+ N + +TL+G + + + V+ DM G P+V
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNV--------------- 181
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
F YN++L LCK +V A+KL EM ++ P+ V+Y T
Sbjct: 182 --------------------FTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTT 221
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+I C+VG +++ L R EP V YN L+ GLC A E++ EM G
Sbjct: 222 VISSMCEVGLVKEGRELAERF-----EPVVSVYNALINGLCKEHDYKGAFELMREMVEKG 276
Query: 181 FLPG--GFSRIVFDDDSACSNGNGSLRANVAARIDER-------TYSALLNGFCRVGRIE 231
P +S ++ + C++G L + ++ +R T S+L+ G G
Sbjct: 277 ISPNVISYSTLI---NVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTF 333
Query: 232 KAKEVLAKLVEN-GVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTL 290
A ++ +++ G+ P+ ++YN LV +C G + KA+ MEE G P+ T+ +L
Sbjct: 334 DALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSL 393
Query: 291 INKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGM 350
IN F + G +D A KML G P + Y +++ R S F + ++E + K+
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENC 453
Query: 351 KPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
P+V ++ + I LC +L AE V M +
Sbjct: 454 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQ 486
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 169/370 (45%), Gaps = 31/370 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVES-GIRPDVVSYGKAVEAAVMLK 59
M K G P++ +++ L + L ++ M+ G++P+VV+Y V+
Sbjct: 307 MLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHG 366
Query: 60 DLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYN 119
++ K + ME+ P++ Y ++ G K + A ++++ML PN V Y
Sbjct: 367 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYT 426
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN 179
+++ C+ + ++A SL M N PSV T+N + GLC +GR++ A +V +ME
Sbjct: 427 NMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQ 486
Query: 180 GFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAK 239
P N+ TY+ LL+G + RIE+A + +
Sbjct: 487 HRCP----------------------PNIV------TYNELLDGLAKANRIEEAYGLTRE 518
Query: 240 LVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGE 299
+ GV S +YN L++ C+ G A+Q +M G P +T N +I +C+ G+
Sbjct: 519 IFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGK 578
Query: 300 VDQAERWVKKML--EKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISY 357
++A + + + + P + +Y ++I G R + +LE + G+ P++ ++
Sbjct: 579 AERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATW 638
Query: 358 GSLINCLCKD 367
LINC D
Sbjct: 639 SVLINCFILD 648
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 166/395 (42%), Gaps = 57/395 (14%)
Query: 28 KVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVL 87
K L V + + P + + K++ + + K FE+M + L +
Sbjct: 42 KELDVVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVM-------------IRKLAM 88
Query: 88 GGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAE 147
G +V + L +M + + + ++I Y +VG E+A + R+K +
Sbjct: 89 DG-----QVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCD 143
Query: 148 PSVIT-----------------------------------YNCLLGGLCSSGRVNDAREV 172
PSV YN LL LC + +V+ A+++
Sbjct: 144 PSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKL 203
Query: 173 LVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDE--RTYSALLNGFCRVGRI 230
LVEM G P S S C G +A R + Y+AL+NG C+
Sbjct: 204 LVEMSNKGCCPDAVSYTTV-ISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDY 262
Query: 231 EKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTL 290
+ A E++ ++VE G+ P+ ISY+ L+N C+ G +E A QM +RG P+ T ++L
Sbjct: 263 KGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSL 322
Query: 291 INK-FCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKG 349
+ F D + W + + G+ P + YN+L+ G+ N VK + +E+ G
Sbjct: 323 VKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIG 382
Query: 350 MKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
PN+ +YGSLIN K L A + M + G
Sbjct: 383 CSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG 417
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 195/370 (52%), Gaps = 17/370 (4%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + + P+V + N + L + + K V DM G P+VVSY ++ L
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273
Query: 61 LDKGFE---LMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVT 117
K ++ ++ M + V P++ +N+++ G K + + K+F EML +++ PN ++
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333
Query: 118 YNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEME 177
YN+LI+G C G++ +A S++ +M + +P++ITYN L+ G C + + +A ++ ++
Sbjct: 334 YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393
Query: 178 GNGFLPGG--FSRIVFDDDSACSNG---NGSLRANVAAR----IDERTYSALLNGFCRVG 228
G G +P ++ ++ D+ C G +G R D TY+ L+ G CR G
Sbjct: 394 GQGAVPTTRMYNMLI---DAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNG 450
Query: 229 RIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFN 288
IE AK++ +L G+ P ++++IL+ YC +G KA ++M + GLKP ++T+N
Sbjct: 451 NIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYN 509
Query: 289 TLINKFCETGEVDQAERWVKKM-LEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEK 347
++ +C+ G + A +M E+ + + +YN L+ GY + +L E+ +
Sbjct: 510 IVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLE 569
Query: 348 KGMKPNVISY 357
KG+ PN I+Y
Sbjct: 570 KGLVPNRITY 579
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 178/365 (48%), Gaps = 33/365 (9%)
Query: 9 SVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELM 68
S S L L+ + V V+ +M+ I+P+V ++ + A ++K ++M
Sbjct: 187 SALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVM 246
Query: 69 GCMEKERVGPSVFVYNLVLGGLCKV---RRVKDARKLFDEMLHRNLVPNTVTYNTLIDGY 125
M+ P+V YN ++ G CK+ ++ A + EM+ ++ PN T+N LIDG+
Sbjct: 247 EDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGF 306
Query: 126 CKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGG 185
K + + + M + +P+VI+YN L+ GLC+ G++++A + +M G P
Sbjct: 307 WKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNL 366
Query: 186 FSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGV 245
TY+AL+NGFC+ +++A ++ + G
Sbjct: 367 I-----------------------------TYNALINGFCKNDMLKEALDMFGSVKGQGA 397
Query: 246 VPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAER 305
VP+ YN+L++AYC G ++ E+ME G+ P T+N LI C G ++ A++
Sbjct: 398 VPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKK 457
Query: 306 WVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLC 365
++ KG+ P L T++ L+ GY R K +L+E+ K G+KP ++Y ++ C
Sbjct: 458 LFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC 516
Query: 366 KDRKL 370
K+ L
Sbjct: 517 KEGNL 521
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 166/317 (52%), Gaps = 33/317 (10%)
Query: 71 MEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVG- 129
M + ++ P+VF +N+V+ LCK ++ AR + ++M PN V+YNTLIDGYCK+G
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273
Query: 130 --EMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
+M KA ++ M + P++ T+N L+ G + + +V EM
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM----------- 322
Query: 188 RIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVP 247
D D ++ NV +Y++L+NG C G+I +A + K+V GV P
Sbjct: 323 ---LDQD---------VKPNVI------SYNSLINGLCNGGKISEAISMRDKMVSAGVQP 364
Query: 248 SQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWV 307
+ I+YN L+N +C +++A+ ++ +G P+ +N LI+ +C+ G++D
Sbjct: 365 NLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALK 424
Query: 308 KKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKD 367
++M +GI P + TYN LI G R N ++ +++ KG+ P+++++ L+ C+
Sbjct: 425 EEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRK 483
Query: 368 RKLLDAEIVLGDMASRG 384
+ A ++L +M+ G
Sbjct: 484 GESRKAAMLLKEMSKMG 500
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 219 ALLNGFCRVGRIEKAKEVLA--KLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQME 276
+ L+GF R G + + + +N V S I+ ++LV AY + E + ++
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIA-DMLVLAYANNSRFELGFEAFKRSG 180
Query: 277 ERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFV 336
G K S ++ L+ + E K+M+ + I P + T+N +IN +
Sbjct: 181 YYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMN 240
Query: 337 KCFEILEEIEKKGMKPNVISYGSLINCLCK---DRKLLDAEIVLGDM 380
K +++E+++ G PNV+SY +LI+ CK + K+ A+ VL +M
Sbjct: 241 KARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEM 287
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 195/386 (50%), Gaps = 9/386 (2%)
Query: 2 RKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDL 61
R G +PSV + N + L + ++ L VF +M + P++ +Y ++ L
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKL 393
Query: 62 DKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTL 121
D FEL M+K + P+V N+++ LCK +++ +A +F+EM ++ P+ +T+ +L
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSL 453
Query: 122 IDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGF 181
IDG KVG ++ A+ + +M + + I Y L+ + GR D ++ +M
Sbjct: 454 IDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNC 513
Query: 182 LP-----GGFSRIVFDDDSACSNGNGSLRANVAARI--DERTYSALLNGFCRVGRIEKAK 234
P + +F G A R D R+YS L++G + G +
Sbjct: 514 SPDLQLLNTYMDCMFKAGEP-EKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETY 572
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
E+ + E G V +YNI+++ +C G V KA Q E+M+ +G +P+ VT+ ++I+
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Query: 295 CETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNV 354
+ +D+A ++ K I + Y+SLI+G+G++ + + ILEE+ +KG+ PN+
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNL 692
Query: 355 ISYGSLINCLCKDRKLLDAEIVLGDM 380
++ SL++ L K ++ +A + M
Sbjct: 693 YTWNSLLDALVKAEEINEALVCFQSM 718
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 200/429 (46%), Gaps = 49/429 (11%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+K G+ P+VR+VN + + L S++ ++ A+F +M PD +++ ++ +
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR 462
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D +++ M + VY ++ R +D K++ +M+++N P+ NT
Sbjct: 463 VDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNT 522
Query: 121 LIDGYCKVGEMEKAFSL----KARMKAPNAEPSVI------------------------- 151
+D K GE EK ++ KAR P+A I
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582
Query: 152 ------TYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP---------GGFSRI-VFDDDS 195
YN ++ G C G+VN A ++L EM+ GF P G ++I D+
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY 642
Query: 196 ACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNIL 255
S R + I YS+L++GF +VGRI++A +L +L++ G+ P+ ++N L
Sbjct: 643 MLFEEAKSKRIELNVVI----YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSL 698
Query: 256 VNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGI 315
++A + +A+ + M+E P+ VT+ LIN C+ + ++A + ++M ++G+
Sbjct: 699 LDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGM 758
Query: 316 APTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEI 375
P+ +Y ++I+G + N + + + + G P+ Y ++I L + +DA
Sbjct: 759 KPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFS 818
Query: 376 VLGDMASRG 384
+ + RG
Sbjct: 819 LFEETRRRG 827
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 169/369 (45%), Gaps = 30/369 (8%)
Query: 12 SVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCM 71
S N L + + F+ + + +M +G P V + + V V L +G++++ M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 72 EKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEM 131
K + P+ Y ++G V LF +M P + TLI G+ K G +
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 132 EKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVF 191
+ A SL MK+ + + ++ YN + G+V+ A + E+E NG P
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKP-------- 271
Query: 192 DDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQIS 251
DE TY++++ C+ R+++A E+ L +N VP +
Sbjct: 272 ---------------------DEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA 310
Query: 252 YNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKML 311
YN ++ Y G ++A E+ +G PS + +N ++ + G+VD+A + ++M
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM- 369
Query: 312 EKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLL 371
+K AP L TYN LI+ R FE+ + ++K G+ PNV + +++ LCK +KL
Sbjct: 370 KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLD 429
Query: 372 DAEIVLGDM 380
+A + +M
Sbjct: 430 EACAMFEEM 438
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 169/369 (45%), Gaps = 29/369 (7%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P ++ +N + + + + EK A+F ++ PD SY + + ++ +EL
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYEL 574
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
M+++ YN+V+ G CK +V A +L +EM + P VTY ++IDG K
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
+ +++A+ L K+ E +V+ Y+ L+ G GR+++A +L E+ G P +
Sbjct: 635 IDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLY- 693
Query: 188 RIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVP 247
T+++LL+ + I +A + E P
Sbjct: 694 ----------------------------TWNSLLDALVKAEEINEALVCFQSMKELKCTP 725
Query: 248 SQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWV 307
+Q++Y IL+N C KA ++M+++G+KPS +++ T+I+ + G + +A
Sbjct: 726 NQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALF 785
Query: 308 KKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKD 367
+ G P YN++I G + + F + EE ++G+ + + L++ L K+
Sbjct: 786 DRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKN 845
Query: 368 RKLLDAEIV 376
L A IV
Sbjct: 846 DCLEQAAIV 854
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 171/366 (46%), Gaps = 30/366 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M++ G P+V L + + L++ +M S + D+V Y +++ +
Sbjct: 194 MQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGK 253
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D ++ +E + P Y ++G LCK R+ +A ++F+ + VP T YNT
Sbjct: 254 VDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNT 313
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+I GY G+ ++A+SL R +A + PSVI YNC+L L G+V++A +V EM+ +
Sbjct: 314 MIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD- 372
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
A + TY+ L++ CR G+++ A E+ +
Sbjct: 373 -----------------------------AAPNLSTYNILIDMLCRAGKLDTAFELRDSM 403
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+ G+ P+ + NI+V+ C +++A E+M+ + P +TF +LI+ + G V
Sbjct: 404 QKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRV 463
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
D A + +KML+ Y SLI + +I +++ + P++ +
Sbjct: 464 DDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTY 523
Query: 361 INCLCK 366
++C+ K
Sbjct: 524 MDCMFK 529
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 187/396 (47%), Gaps = 21/396 (5%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G PSV + + V + + + V M + RP +Y + A +
Sbjct: 124 MSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNH 183
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
D L M++ P+V ++ ++ G K RV A L DEM +L + V YN
Sbjct: 184 SDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNV 243
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
ID + KVG+++ A+ ++A +P +TY ++G LC + R+++A E+ +E N
Sbjct: 244 CIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR 303
Query: 181 FLPGGFSRIV----------FDDDSAC---SNGNGSLRANVAARIDERTYSALLNGFCRV 227
+P ++ FD+ + GS+ + +A Y+ +L ++
Sbjct: 304 RVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIA-------YNCILTCLRKM 356
Query: 228 GRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTF 287
G++++A +V ++ ++ P+ +YNIL++ C G ++ A + + M++ GL P+ T
Sbjct: 357 GKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTV 415
Query: 288 NTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEK 347
N ++++ C++ ++D+A ++M K P T+ SLI+G G++ +++ E++
Sbjct: 416 NIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLD 475
Query: 348 KGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
+ N I Y SLI + D + DM ++
Sbjct: 476 SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ 511
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 131/323 (40%), Gaps = 46/323 (14%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M++ G + R+ N + + + K + +M G P VV+YG ++ +
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDR 637
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
LD+ + L + +R+ +V +Y+ ++ G KV R+ +A + +E++ + L PN T+N+
Sbjct: 638 LDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNS 697
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L+D K E+ +A MK P+ +TY L+ GLC + N A EM+ G
Sbjct: 698 LLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG 757
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P S Y+ +++G + G I +A + +
Sbjct: 758 MKPSTIS-----------------------------YTTMISGLAKAGNIAEAGALFDRF 788
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGL----KPSYVTFNTLINKFC- 295
NG VP YN ++ + A E+ RGL K V +TL C
Sbjct: 789 KANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCL 848
Query: 296 -----------ETGEVDQAER-W 306
ETG+ A R W
Sbjct: 849 EQAAIVGAVLRETGKARHAARSW 871
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 138/324 (42%), Gaps = 30/324 (9%)
Query: 58 LKDLDKGFELMGCMEKERVGPSVF-VYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTV 116
LKD+++ E E+ P YN +L + + R ++ EM P+
Sbjct: 75 LKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVN 134
Query: 117 TYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEM 176
T ++ G K ++ + + + M+ P+ Y L+G + + + +M
Sbjct: 135 TCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQM 194
Query: 177 EGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEV 236
+ G+ P ++ L+ GF + GR++ A +
Sbjct: 195 QELGYEP-----------------------------TVHLFTTLIRGFAKEGRVDSALSL 225
Query: 237 LAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCE 296
L ++ + + + YN+ ++++ G V+ A + ++E GLKP VT+ ++I C+
Sbjct: 226 LDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCK 285
Query: 297 TGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVIS 356
+D+A + + + P YN++I GYG F + + +LE KG P+VI+
Sbjct: 286 ANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIA 345
Query: 357 YGSLINCLCKDRKLLDAEIVLGDM 380
Y ++ CL K K+ +A V +M
Sbjct: 346 YNCILTCLRKMGKVDEALKVFEEM 369
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 174/364 (47%), Gaps = 30/364 (8%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G P + + + L + + L + M + I DVV Y ++ K +D
Sbjct: 210 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 269
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
F+L ME + + P VF YN ++ LC R DA +L +ML +N+ P+ V +N LID
Sbjct: 270 FDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDA 329
Query: 125 YCKVGEMEKAFSLKARM-KAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP 183
+ K G++ +A L M K+ + P V+ YN L+ G C RV + EV EM G +
Sbjct: 330 FVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV- 388
Query: 184 GGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVEN 243
GN TY+ L++GF + + A+ V ++V +
Sbjct: 389 ----------------GNTV------------TYTTLIHGFFQARDCDNAQMVFKQMVSD 420
Query: 244 GVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQA 303
GV P ++YNIL++ C+ G VE A+ E M++R +K VT+ T+I C+ G+V+
Sbjct: 421 GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Query: 304 ERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINC 363
+ KG+ P + TY ++++G+ R + + E+++ G PN +Y +LI
Sbjct: 481 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Query: 364 LCKD 367
+D
Sbjct: 541 RLRD 544
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 181/385 (47%), Gaps = 30/385 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K PS+ ++L + +F+ V+++ M GI ++ +Y +
Sbjct: 66 MVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQ 125
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L ++G M K GPS+ N +L G C R+ +A L D+M+ P+TVT+ T
Sbjct: 126 LSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTT 185
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L+ G + + +A +L RM +P ++TY ++ GLC G + A +L +ME
Sbjct: 186 LVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME--- 242
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
G + A+V Y+ +++G C+ ++ A ++ K+
Sbjct: 243 --------------------KGKIEADVV------IYNTIIDGLCKYKHMDDAFDLFNKM 276
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
G+ P +YN L++ C+ G A + M E+ + P V FN LI+ F + G++
Sbjct: 277 ETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKL 336
Query: 301 DQAERWVKKMLE-KGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGS 359
+AE+ +M++ K P + YN+LI G+ + + E+ E+ ++G+ N ++Y +
Sbjct: 337 VEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTT 396
Query: 360 LINCLCKDRKLLDAEIVLGDMASRG 384
LI+ + R +A++V M S G
Sbjct: 397 LIHGFFQARDCDNAQMVFKQMVSDG 421
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 166/331 (50%), Gaps = 7/331 (2%)
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
LD L G M K R PS+ ++ +L + K+ + L ++M + + N TY+
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
I+ +C+ ++ A ++ +M PS++T N LL G C R+++A ++ +M G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 181 FLPG--GFSRIV---FDDDSACSNGNGSLRANV-AARIDERTYSALLNGFCRVGRIEKAK 234
+ P F+ +V F + A R V + D TY A++NG C+ G + A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
+L K+ + + + YN +++ C +++ A +ME +G+KP T+N LI+
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 295 CETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEK-KGMKPN 353
C G A R + MLEK I P L +N+LI+ + + V+ ++ +E+ K K P+
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 354 VISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
V++Y +LI CK +++ + V +M+ RG
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRG 386
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 95 RVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYN 154
++ DA LF +M+ P+ V ++ L+ K+ + + SL +M+ ++ TY+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 155 CLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDE 214
+ C +++ A +L +M G+ P IV
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPS----IV------------------------ 146
Query: 215 RTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQ 274
T ++LLNGFC RI +A ++ ++VE G P +++ LV+ +A+ E+
Sbjct: 147 -TLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVER 205
Query: 275 MEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISN 334
M +G +P VT+ +IN C+ GE D A + KM + I + YN++I+G + +
Sbjct: 206 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKH 265
Query: 335 FVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
F++ ++E KG+KP+V +Y LI+CLC + DA +L DM +
Sbjct: 266 MDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEK 314
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G++ + + L ++ + VF MV G+ PD+++Y ++ +
Sbjct: 382 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN 441
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
++ + M+K + + Y ++ LCK +V+D LF + + + PN VTY T
Sbjct: 442 VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 501
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
++ G+C+ G E+A +L MK P+ TYN L+ G + E++ EM G
Sbjct: 502 MMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCG 561
Query: 181 F 181
F
Sbjct: 562 F 562
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 83/156 (53%)
Query: 229 RIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFN 288
+++ A + +V++ PS + ++ L++A + I EQM+ G+ + T++
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 289 TLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKK 348
IN FC ++ A + KM++ G P++ T NSL+NG+ + + +++++ +
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 349 GMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
G +P+ +++ +L++ L + K +A ++ M +G
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 210
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 187/384 (48%), Gaps = 30/384 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
+R G+ P +++ L +LV + + V +F MV+ G+ ++ Y V A D
Sbjct: 159 IRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGD 218
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+K +L+ ME++ V P +F YN ++ CK +A + D M + PN VTYN+
Sbjct: 219 PEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNS 278
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
I G+ + G M +A L +K + + +TY L+ G C +++A + ME G
Sbjct: 279 FIHGFSREGRMREATRLFREIK-DDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRG 337
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
F PG TY+++L C GRI +A +L ++
Sbjct: 338 FSPGVV-----------------------------TYNSILRKLCEDGRIREANRLLTEM 368
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+ P I+ N L+NAYC + A++ ++M E GLK ++ LI+ FC+ E+
Sbjct: 369 SGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLEL 428
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
+ A+ + M+EKG +P TY+ L++G+ + + ++LEE EK+G+ +V Y L
Sbjct: 429 ENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGL 488
Query: 361 INCLCKDRKLLDAEIVLGDMASRG 384
I +CK ++ A+++ M +G
Sbjct: 489 IRRICKLEQVDYAKVLFESMEKKG 512
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 184/386 (47%), Gaps = 25/386 (6%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K GV+ ++ N L S EK + ++M E G+ PD+ +Y +
Sbjct: 194 MVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSM 253
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ + ME+ V P++ YN + G + R+++A +LF E + ++ N VTY T
Sbjct: 254 HFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTT 312
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LIDGYC++ ++++A L+ M++ P V+TYN +L LC GR+ +A +L EM G
Sbjct: 313 LIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKK 372
Query: 181 FLPGGFSRIVFDDDSACS---NGNGSLRANVAA------------RIDERTYSALLNGFC 225
P D+ C+ N + V+A ++D +Y AL++GFC
Sbjct: 373 IEP---------DNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFC 423
Query: 226 RVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYV 285
+V +E AKE L ++E G P +Y+ LV+ + ++ ++ + E+ E+RGL
Sbjct: 424 KVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVA 483
Query: 286 TFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEI 345
+ LI + C+ +VD A+ + M +KG+ + ++ Y R + + + +
Sbjct: 484 LYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVM 543
Query: 346 EKKGMKPNVISYGSLINCLCKDRKLL 371
+ + N+ Y S+ D +L
Sbjct: 544 YNRRLMVNLKLYKSISASYAGDNDVL 569
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 157/311 (50%), Gaps = 11/311 (3%)
Query: 82 VYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARM 141
V++ ++ K + D+ +F+++ L P+ L++ K + + + +M
Sbjct: 135 VFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKM 194
Query: 142 KAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSR----IVFDDDS-- 195
++ YN L+ SG A ++L EME G P F+ V+ S
Sbjct: 195 VKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMH 254
Query: 196 --ACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYN 253
A S + R+ VA I TY++ ++GF R GR+ +A L + +++ V + ++Y
Sbjct: 255 FEALSVQDRMERSGVAPNI--VTYNSFIHGFSREGRMREATR-LFREIKDDVTANHVTYT 311
Query: 254 ILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK 313
L++ YC +++A++ E ME RG P VT+N+++ K CE G + +A R + +M K
Sbjct: 312 TLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGK 371
Query: 314 GIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDA 373
I P T N+LIN Y +I + V ++ +++ + G+K ++ SY +LI+ CK +L +A
Sbjct: 372 KIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENA 431
Query: 374 EIVLGDMASRG 384
+ L M +G
Sbjct: 432 KEELFSMIEKG 442
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 147/339 (43%), Gaps = 30/339 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + GV P++ + N + + +F + ++ + + V+Y ++ + D
Sbjct: 264 MERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLIDGYCRMND 322
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D+ L ME P V YN +L LC+ R+++A +L EM + + P+ +T NT
Sbjct: 323 IDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNT 382
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI+ YCK+ +M A +K +M + + +Y L+ G C + +A+E L M G
Sbjct: 383 LINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKG 442
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
F PG TYS L++GF + ++ ++L +
Sbjct: 443 FSPG-----------------------------YATYSWLVDGFYNQNKQDEITKLLEEF 473
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+ G+ Y L+ C V+ A E ME++GL V F T+ + TG+V
Sbjct: 474 EKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKV 533
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCF 339
+A M + + L+ Y S+ Y ++ ++ F
Sbjct: 534 TEASALFDVMYNRRLMVNLKLYKSISASYAGDNDVLRFF 572
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
Query: 247 PSQIS--YNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
P +S ++ L+ Y G + +I EQ+ GLKP L+N + D
Sbjct: 129 PEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVW 188
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
+ KKM++ G+ + YN L++ + + K ++L E+E+KG+ P++ +Y +LI+
Sbjct: 189 KIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVY 248
Query: 365 CKDRKLLDAEIVLGDMASRG 384
CK +A V M G
Sbjct: 249 CKKSMHFEALSVQDRMERSG 268
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 179/364 (49%), Gaps = 29/364 (7%)
Query: 14 NRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEK 73
N L LV S+ E + + M+E+ + VS +E V ++ F ++ M K
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 74 ERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEK 133
+V+ +N++L GLC+ A L EM +L+P+ +YNT+I G+C+ E+EK
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 134 AFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDD 193
A L MK S++T+ L+ C +G++++A L EM+ G
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG------------- 242
Query: 194 DSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYN 253
L A++ Y++L+ GFC G +++ K + +++E G P I+YN
Sbjct: 243 ----------LEADLV------VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYN 286
Query: 254 ILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK 313
L+ +C G +++A + E M ERG++P+ T+ LI+ C G+ +A + + M+EK
Sbjct: 287 TLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK 346
Query: 314 GIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDA 373
P TYN +IN + EI+E ++K+ +P+ I+Y L+ LC L +A
Sbjct: 347 DEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEA 406
Query: 374 EIVL 377
+L
Sbjct: 407 SKLL 410
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 195/390 (50%), Gaps = 22/390 (5%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P + N L Q ++ +F M+E G+RP+V +Y ++ + + +L
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
+ M ++ P+ YN+++ LCK V DA ++ + M R P+ +TYN L+ G C
Sbjct: 340 LNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCA 399
Query: 128 VGEMEKAFSLKARM--KAPNAEPSVITYNCLLGGLCSSGRVNDAREV---LVEMEGNGFL 182
G++++A L M + +P VI+YN L+ GLC R++ A ++ LVE G G
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG-- 457
Query: 183 PGGFSRIVFDDDSACSNGNGSLR-----ANVAARIDERTYSALLNGFCRVGRIEKAKEVL 237
+ I+ + + N ++ ++ + TY+A+++GFC+ G + AK +L
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517
Query: 238 AKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCET 297
K+ + + PS YN L+++ C EG +++A + E+M+ P V+FN +I+ +
Sbjct: 518 CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKA 577
Query: 298 GEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISY 357
G++ AE + M G++P L TY+ LIN + ++ + +++ G +P+
Sbjct: 578 GDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHIC 637
Query: 358 GSLIN-CLCKD---------RKLLDAEIVL 377
S++ C+ + +KL+D +IVL
Sbjct: 638 DSVLKYCISQGETDKLTELVKKLVDKDIVL 667
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 203/427 (47%), Gaps = 43/427 (10%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYG----------K 50
MR++ ++P V S N + K+ EK L + +M SG +V++G K
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227
Query: 51 AVEAAVMLKD-------------------------LDKGFELMGCMEKERVGPSVFVYNL 85
EA LK+ LD+G L + + P YN
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287
Query: 86 VLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPN 145
++ G CK+ ++K+A ++F+ M+ R + PN TY LIDG C VG+ ++A L M +
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Query: 146 AEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVF--------DDDSAC 197
EP+ +TYN ++ LC G V DA E++ M+ P + + D D A
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407
Query: 198 SNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVN 257
L+ + D +Y+AL++G C+ R+ +A ++ LVE +++ NIL+N
Sbjct: 408 KLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLN 467
Query: 258 AYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAP 317
+ G V KA++ +Q+ + + + T+ +I+ FC+TG ++ A+ + KM + P
Sbjct: 468 STLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP 527
Query: 318 TLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVL 377
++ YN L++ + + + + + EE+++ P+V+S+ +I+ K + AE +L
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587
Query: 378 GDMASRG 384
M+ G
Sbjct: 588 VGMSRAG 594
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 175/368 (47%), Gaps = 31/368 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K G +V + N L + L + + K +++ +M + + PDV SY + K+
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L+K EL M+ S+ + +++ CK ++ +A EM L + V Y +
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI G+C GE+++ +L + P ITYN L+ G C G++ +A E+ M G
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P + TY+ L++G C VG+ ++A ++L +
Sbjct: 313 VRPNVY-----------------------------TYTGLIDGLCGVGKTKEALQLLNLM 343
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+E P+ ++YNI++N C +G V A++ E M++R +P +T+N L+ C G++
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403
Query: 301 DQAERWVKKMLEKG--IAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYG 358
D+A + + ML+ P + +YN+LI+G + + + +I + + +K + ++
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463
Query: 359 SLINCLCK 366
L+N K
Sbjct: 464 ILLNSTLK 471
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 165/391 (42%), Gaps = 87/391 (22%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSY------------ 48
M + GV P+V + L + L G + ++ L + M+E P+ V+Y
Sbjct: 308 MIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGL 367
Query: 49 -GKAVEAAVMLK----------------------DLDKGFELMGCMEKER--VGPSVFVY 83
AVE ++K DLD+ +L+ M K+ P V Y
Sbjct: 368 VADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISY 427
Query: 84 NLVLGGLCKVRRVKDARKLFDEMLHR---------------------------------- 109
N ++ GLCK R+ A ++D ++ +
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487
Query: 110 -NLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVND 168
+V N+ TY +IDG+CK G + A L +M+ +PSV YNCLL LC G ++
Sbjct: 488 SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQ 547
Query: 169 AREVLVEMEGNGFLPGGFSRIVFDD--------DSACSNGNGSLRANVAARIDERTYSAL 220
A + EM+ + P S + D SA S G RA ++ D TYS L
Sbjct: 548 AWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSP--DLFTYSKL 605
Query: 221 LNGFCRVGRIEKAKEVLAKLVENGVVP-SQISYNILVNAYC-HEGYVEKAIQTAEQMEER 278
+N F ++G +++A K+V++G P + I ++L YC +G +K + +++ ++
Sbjct: 606 INRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL--KYCISQGETDKLTELVKKLVDK 663
Query: 279 GLKPSYVTFNTLINKFC-ETGEVDQAERWVK 308
+ T+++ C + +D A+R ++
Sbjct: 664 DIVLDKELTCTVMDYMCNSSANMDLAKRLLR 694
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 90/168 (53%)
Query: 217 YSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQME 276
++ LL G CR KA +L ++ N ++P SYN ++ +C +EKA++ A +M+
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204
Query: 277 ERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFV 336
G S VT+ LI+ FC+ G++D+A ++K+M G+ L Y SLI G+
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 337 KCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ + +E+ ++G P I+Y +LI CK +L +A + M RG
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 83/169 (49%)
Query: 216 TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQM 275
+ S LL + ++ + A VLA +++ G + ++NIL+ C KA+ +M
Sbjct: 109 SLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREM 168
Query: 276 EERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNF 335
L P ++NT+I FCE E+++A +M G + +L T+ LI+ + +
Sbjct: 169 RRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKM 228
Query: 336 VKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ L+E++ G++ +++ Y SLI C +L + + ++ RG
Sbjct: 229 DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 160/347 (46%), Gaps = 33/347 (9%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G P V + L L + + LA+ MVE G +P YG + + D
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ L+ ME+ + V +YN ++ LCK A+ LF EM + + P+ +TY+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+ID +C+ G A L M P V+T++ L+ L G+V++A E+ +M G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P TY+++++GFC+ R+ AK +L +
Sbjct: 177 IFPTTI-----------------------------TYNSMIDGFCKQDRLNDAKRMLDSM 207
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
P ++++ L+N YC V+ ++ +M RG+ + VT+ TLI+ FC+ G++
Sbjct: 208 ASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDL 267
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEK 347
D A+ + M+ G+AP T+ S++ K F ILE+++K
Sbjct: 268 DAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 161/312 (51%), Gaps = 16/312 (5%)
Query: 78 PSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSL 137
P V + ++ GLC RV A L D M+ P Y T+I+G CK+G+ E A +L
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63
Query: 138 KARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG--GFSRIVFDDDS 195
++M+ + + V+ YN ++ LC G A+ + EM G P +S ++ DS
Sbjct: 64 LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMI---DS 120
Query: 196 ACSNGNGS-----LRANVAARI--DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPS 248
C +G + LR + +I D T+SAL+N + G++ +A+E+ ++ G+ P+
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180
Query: 249 QISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVK 308
I+YN +++ +C + + A + + M + P VTF+TLIN +C+ VD
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFC 240
Query: 309 KMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDR 368
+M +GI TY +LI+G+ ++ + ++L + G+ PN I++ S++ LC +
Sbjct: 241 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKK 300
Query: 369 KLLDAEIVLGDM 380
+L A +L D+
Sbjct: 301 ELRKAFAILEDL 312
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 196/421 (46%), Gaps = 41/421 (9%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
GV P V + E+ + +F+ M E+G+ P+VV++ ++ M D+
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
F M + + P++ Y++++ GL + +R+ DA + EM + PN + YN LID
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGF--L 182
+ + G + KA +K M + + TYN L+ G C +G+ ++A +L EM GF
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 183 PGGF--------SRIVFDD------------------------DSACSNGNGSLRANVAA 210
G F S ++FD C +G S +
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 494
Query: 211 R-------IDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEG 263
+ +D RT +ALL+G C G++++A + +++ G V ++SYN L++ C +
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 264 YVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYN 323
+++A ++M +RGLKP T++ LI +V++A ++ G+ P + TY+
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 324 SLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
+I+G + + E +E+ K ++PN + Y LI C+ +L A + DM +
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Query: 384 G 384
G
Sbjct: 675 G 675
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 196/435 (45%), Gaps = 61/435 (14%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSY----------GK 50
M K G P+V N L ++ + + K + + MV G+ +Y G+
Sbjct: 356 MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ 415
Query: 51 AVEAAVMLKDL-------------------------DKGFELMGCMEKERVGPSVFVYNL 85
A A +LK++ D +G M + P +
Sbjct: 416 ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT 475
Query: 86 VLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPN 145
++ GLCK + A +L+ + L++ V +T T N L+ G C+ G++++AF ++ +
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 146 AEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS----------------RI 189
++YN L+ G C ++++A L EM G P ++ I
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 595
Query: 190 VFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQ 249
F DD C NG L D TYS +++G C+ R E+ +E +++ V P+
Sbjct: 596 QFWDD--CKR-NGMLP-------DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 250 ISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKK 309
+ YN L+ AYC G + A++ E M+ +G+ P+ T+ +LI V++A+ ++
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Query: 310 MLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRK 369
M +G+ P + Y +LI+GYG++ VK +L E+ K + PN I+Y +I +D
Sbjct: 706 MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGN 765
Query: 370 LLDAEIVLGDMASRG 384
+ +A +L +M +G
Sbjct: 766 VTEASRLLNEMREKG 780
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 154/336 (45%), Gaps = 29/336 (8%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G + R+ N L L + + ++ + +++ G D VSY + K LD+
Sbjct: 500 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 559
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
F + M K + P + Y++++ GL + +V++A + +D+ ++P+ TY+ +IDG
Sbjct: 560 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 619
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
CK E+ M + N +P+ + YN L+ C SGR++ A E+ +M+ G P
Sbjct: 620 CCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP- 678
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
+ TY++L+ G + R+E+AK + ++ G
Sbjct: 679 ----------------------------NSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 710
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
+ P+ Y L++ Y G + K +M + + P+ +T+ +I + G V +A
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFE 340
R + +M EKGI P TY I GY + ++ F+
Sbjct: 771 RLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 145/296 (48%), Gaps = 6/296 (2%)
Query: 84 NLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKA 143
N +L GLC+ ++ +A ++ E+L R V + V+YNTLI G C ++++AF M
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 144 PNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSA----CSN 199
+P TY+ L+ GL + +V +A + + + NG LP ++ V D
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 200 GNGSLRANVAARIDERT--YSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVN 257
G ++ + T Y+ L+ +CR GR+ A E+ + G+ P+ +Y L+
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 258 AYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAP 317
VE+A E+M GL+P+ + LI+ + + G++ + E +++M K + P
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 318 TLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDA 373
TY +I GY R N + +L E+ +KG+ P+ I+Y I K +L+A
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 109/223 (48%), Gaps = 4/223 (1%)
Query: 2 RKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDL 61
+++G+LP V + + + + +++ E+ F +M+ ++P+ V Y + A L
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 661
Query: 62 DKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTL 121
EL M+ + + P+ Y ++ G+ + RV++A+ LF+EM L PN Y L
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Query: 122 IDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGF 181
IDGY K+G+M K L M + N P+ ITY ++GG G V +A +L EM G
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Query: 182 LPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGF 224
+P + F G L A + DE Y+A++ G+
Sbjct: 782 VPDSITYKEF--IYGYLKQGGVLEAFKGS--DEENYAAIIEGW 820
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 94/179 (52%), Gaps = 1/179 (0%)
Query: 206 ANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYV 265
AN + T + LL R +K E +V GV P + +NA+C G V
Sbjct: 218 ANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKV 276
Query: 266 EKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSL 325
E+A++ +MEE G+ P+ VTFNT+I+ G D+A + +KM+E+G+ PTL TY+ L
Sbjct: 277 EEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 336
Query: 326 INGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ G R + +L+E+ KKG PNVI Y +LI+ + L A + M S+G
Sbjct: 337 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 74/169 (43%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M V P+ N L S + L + DM GI P+ +Y ++ ++
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+++ L M E + P+VF Y ++ G K+ ++ L EM +N+ PN +TY
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDA 169
+I GY + G + +A L M+ P ITY + G G V +A
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 68/135 (50%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+ G+ P+ + L + + + E+ +F +M G+ P+V Y ++ L
Sbjct: 671 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 730
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ K L+ M + V P+ Y +++GG + V +A +L +EM + +VP+++TY
Sbjct: 731 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 790
Query: 121 LIDGYCKVGEMEKAF 135
I GY K G + +AF
Sbjct: 791 FIYGYLKQGGVLEAF 805
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 196/421 (46%), Gaps = 41/421 (9%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
GV P V + E+ + +F+ M E+G+ P+VV++ ++ M D+
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
F M + + P++ Y++++ GL + +R+ DA + EM + PN + YN LID
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGF--L 182
+ + G + KA +K M + + TYN L+ G C +G+ ++A +L EM GF
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 183 PGGF--------SRIVFDD------------------------DSACSNGNGSLRANVAA 210
G F S ++FD C +G S +
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 494
Query: 211 R-------IDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEG 263
+ +D RT +ALL+G C G++++A + +++ G V ++SYN L++ C +
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 264 YVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYN 323
+++A ++M +RGLKP T++ LI +V++A ++ G+ P + TY+
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 324 SLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
+I+G + + E +E+ K ++PN + Y LI C+ +L A + DM +
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Query: 384 G 384
G
Sbjct: 675 G 675
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 196/435 (45%), Gaps = 61/435 (14%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSY----------GK 50
M K G P+V N L ++ + + K + + MV G+ +Y G+
Sbjct: 356 MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ 415
Query: 51 AVEAAVMLKDL-------------------------DKGFELMGCMEKERVGPSVFVYNL 85
A A +LK++ D +G M + P +
Sbjct: 416 ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT 475
Query: 86 VLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPN 145
++ GLCK + A +L+ + L++ V +T T N L+ G C+ G++++AF ++ +
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 146 AEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS----------------RI 189
++YN L+ G C ++++A L EM G P ++ I
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 595
Query: 190 VFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQ 249
F DD C NG L D TYS +++G C+ R E+ +E +++ V P+
Sbjct: 596 QFWDD--CKR-NGMLP-------DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 250 ISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKK 309
+ YN L+ AYC G + A++ E M+ +G+ P+ T+ +LI V++A+ ++
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Query: 310 MLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRK 369
M +G+ P + Y +LI+GYG++ VK +L E+ K + PN I+Y +I +D
Sbjct: 706 MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGN 765
Query: 370 LLDAEIVLGDMASRG 384
+ +A +L +M +G
Sbjct: 766 VTEASRLLNEMREKG 780
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 154/336 (45%), Gaps = 29/336 (8%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G + R+ N L L + + ++ + +++ G D VSY + K LD+
Sbjct: 500 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 559
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
F + M K + P + Y++++ GL + +V++A + +D+ ++P+ TY+ +IDG
Sbjct: 560 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 619
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
CK E+ M + N +P+ + YN L+ C SGR++ A E+ +M+ G P
Sbjct: 620 CCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP- 678
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
+ TY++L+ G + R+E+AK + ++ G
Sbjct: 679 ----------------------------NSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 710
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
+ P+ Y L++ Y G + K +M + + P+ +T+ +I + G V +A
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFE 340
R + +M EKGI P TY I GY + ++ F+
Sbjct: 771 RLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 145/296 (48%), Gaps = 6/296 (2%)
Query: 84 NLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKA 143
N +L GLC+ ++ +A ++ E+L R V + V+YNTLI G C ++++AF M
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 144 PNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSA----CSN 199
+P TY+ L+ GL + +V +A + + + NG LP ++ V D
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 200 GNGSLRANVAARIDERT--YSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVN 257
G ++ + T Y+ L+ +CR GR+ A E+ + G+ P+ +Y L+
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 258 AYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAP 317
VE+A E+M GL+P+ + LI+ + + G++ + E +++M K + P
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 318 TLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDA 373
TY +I GY R N + +L E+ +KG+ P+ I+Y I K +L+A
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 109/223 (48%), Gaps = 4/223 (1%)
Query: 2 RKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDL 61
+++G+LP V + + + + +++ E+ F +M+ ++P+ V Y + A L
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 661
Query: 62 DKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTL 121
EL M+ + + P+ Y ++ G+ + RV++A+ LF+EM L PN Y L
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Query: 122 IDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGF 181
IDGY K+G+M K L M + N P+ ITY ++GG G V +A +L EM G
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Query: 182 LPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGF 224
+P + F G L A + DE Y+A++ G+
Sbjct: 782 VPDSITYKEF--IYGYLKQGGVLEAFKGS--DEENYAAIIEGW 820
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 94/179 (52%), Gaps = 1/179 (0%)
Query: 206 ANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYV 265
AN + T + LL R +K E +V GV P + +NA+C G V
Sbjct: 218 ANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKV 276
Query: 266 EKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSL 325
E+A++ +MEE G+ P+ VTFNT+I+ G D+A + +KM+E+G+ PTL TY+ L
Sbjct: 277 EEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 336
Query: 326 INGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ G R + +L+E+ KKG PNVI Y +LI+ + L A + M S+G
Sbjct: 337 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 74/169 (43%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M V P+ N L S + L + DM GI P+ +Y ++ ++
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+++ L M E + P+VF Y ++ G K+ ++ L EM +N+ PN +TY
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDA 169
+I GY + G + +A L M+ P ITY + G G V +A
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 68/135 (50%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+ G+ P+ + L + + + E+ +F +M G+ P+V Y ++ L
Sbjct: 671 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 730
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ K L+ M + V P+ Y +++GG + V +A +L +EM + +VP+++TY
Sbjct: 731 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 790
Query: 121 LIDGYCKVGEMEKAF 135
I GY K G + +AF
Sbjct: 791 FIYGYLKQGGVLEAF 805
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 187/385 (48%), Gaps = 30/385 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G+ P+V S N + K + VF++++E G++P+ +Y ++ D
Sbjct: 469 MESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHD 528
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLH-RNLVPNTVTYN 119
E++ M + + VY ++ GLCKV + AR+L M+ + L + ++YN
Sbjct: 529 EQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYN 588
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN 179
++IDG+ K GEM+ A + M P+VITY L+ GLC + R++ A E+ EM+
Sbjct: 589 SIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNK 648
Query: 180 GFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAK 239
G ++D Y AL++GFC+ +E A + ++
Sbjct: 649 G-----------------------------VKLDIPAYGALIDGFCKRSNMESASALFSE 679
Query: 240 LVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGE 299
L+E G+ PSQ YN L++ + + G + A+ ++M + GL+ T+ TLI+ + G
Sbjct: 680 LLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGN 739
Query: 300 VDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGS 359
+ A +M G+ P Y ++NG + FVK ++ EE++K + PNV+ Y +
Sbjct: 740 LILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNA 799
Query: 360 LINCLCKDRKLLDAEIVLGDMASRG 384
+I ++ L +A + +M +G
Sbjct: 800 VIAGHYREGNLDEAFRLHDEMLDKG 824
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 204/428 (47%), Gaps = 47/428 (10%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M DG+ +V + L + L +F M + G P+ V++ +E +
Sbjct: 330 MLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGE 389
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
++K E ME + PSVF + ++ G K ++ ++A KLFDE L N NT
Sbjct: 390 MEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNT 448
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
++ CK G+ ++A L ++M++ P+V++YN ++ G C ++ AR V + G
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG 508
Query: 181 FLPGGFSRIVF--------DDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEK 232
P ++ + D+ +A N +N+ ++ Y ++NG C+VG+ K
Sbjct: 509 LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNI--EVNGVVYQTIINGLCKVGQTSK 566
Query: 233 AKEVLAKLVE------------------------------------NGVVPSQISYNILV 256
A+E+LA ++E NG+ P+ I+Y L+
Sbjct: 567 ARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLM 626
Query: 257 NAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIA 316
N C +++A++ ++M+ +G+K + LI+ FC+ ++ A ++LE+G+
Sbjct: 627 NGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLN 686
Query: 317 PTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIV 376
P+ YNSLI+G+ + N V ++ +++ K G++ ++ +Y +LI+ L KD L+ A +
Sbjct: 687 PSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASEL 746
Query: 377 LGDMASRG 384
+M + G
Sbjct: 747 YTEMQAVG 754
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 183/400 (45%), Gaps = 44/400 (11%)
Query: 28 KVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCM-EKERVGPSVFVYNLV 86
+ L V + +E G PD + Y AV+A DL L+ M EK+ PS Y V
Sbjct: 251 EALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSV 310
Query: 87 LGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNA 146
+ K + DA +L DEML + N V +LI G+CK ++ A L +M+
Sbjct: 311 ILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGP 370
Query: 147 EPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGF-----------------SRI 189
P+ +T++ L+ +G + A E +ME G P F +
Sbjct: 371 SPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALK 430
Query: 190 VFDD----------------DSACSNGNGSLRANVAARIDER-------TYSALLNGFCR 226
+FD+ C G + ++++ R +Y+ ++ G CR
Sbjct: 431 LFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCR 490
Query: 227 VGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEK-AIQTAEQMEERGLKPSYV 285
++ A+ V + ++E G+ P+ +Y+IL++ C + E+ A++ M ++ + V
Sbjct: 491 QKNMDLARIVFSNILEKGLKPNNYTYSILIDG-CFRNHDEQNALEVVNHMTSSNIEVNGV 549
Query: 286 TFNTLINKFCETGEVDQAERWVKKML-EKGIAPTLETYNSLINGYGRISNFVKCFEILEE 344
+ T+IN C+ G+ +A + M+ EK + + +YNS+I+G+ + EE
Sbjct: 550 VYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEE 609
Query: 345 IEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ G+ PNVI+Y SL+N LCK+ ++ A + +M ++G
Sbjct: 610 MCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKG 649
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 145/313 (46%), Gaps = 16/313 (5%)
Query: 83 YNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMK 142
+N +L K R+ A + ++ML +++P N + + + +A L +RM
Sbjct: 166 FNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMV 225
Query: 143 APNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGG--FSRIVFDDDSAC--- 197
A + +T L+ + +A EVL G P +S V AC
Sbjct: 226 AIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAV----QACCKT 281
Query: 198 ---SNGNGSLRANVAARI---DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQIS 251
+ N LR ++ + TY++++ + G ++ A + +++ +G+ + ++
Sbjct: 282 LDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVA 341
Query: 252 YNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKML 311
L+ +C + A+ ++ME+ G P+ VTF+ LI F + GE+++A + KKM
Sbjct: 342 ATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKME 401
Query: 312 EKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLL 371
G+ P++ +++I G+ + + ++ +E + G+ NV ++++ LCK K
Sbjct: 402 VLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTD 460
Query: 372 DAEIVLGDMASRG 384
+A +L M SRG
Sbjct: 461 EATELLSKMESRG 473
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 158/374 (42%), Gaps = 59/374 (15%)
Query: 59 KDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTY 118
+ D +++ M + V P N L L + + +A++L+ M+ + + VT
Sbjct: 177 RQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTT 236
Query: 119 NTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEG 178
L+ + + +A + +R AEP + Y+ + C + + A +L EM+
Sbjct: 237 QLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKE 296
Query: 179 NGF-LPG--GFSRIVF--------DD-----DSACSNGNGSLRANVAARIDERTYSALLN 222
+P ++ ++ DD D S+G + NV A ++L+
Sbjct: 297 KKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDG---ISMNVVAA------TSLIT 347
Query: 223 GFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKP 282
G C+ + A + K+ + G P+ +++++L+ + G +EKA++ ++ME GL P
Sbjct: 348 GHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTP 407
Query: 283 SYVTF----------------------------------NTLINKFCETGEVDQAERWVK 308
S NT+++ C+ G+ D+A +
Sbjct: 408 SVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLS 467
Query: 309 KMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDR 368
KM +GI P + +YN+++ G+ R N + I +KG+KPN +Y LI+ ++
Sbjct: 468 KMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNH 527
Query: 369 KLLDAEIVLGDMAS 382
+A V+ M S
Sbjct: 528 DEQNALEVVNHMTS 541
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+ GV + + L + E A+F++++E G+ P Y + L +
Sbjct: 645 MKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGN 704
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ +L M K+ + + Y ++ GL K + A +L+ EM LVP+ + Y
Sbjct: 705 MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTV 764
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+++G K G+ K + MK N P+V+ YN ++ G G +++A + EM G
Sbjct: 765 IVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKG 824
Query: 181 FLPGG 185
LP G
Sbjct: 825 ILPDG 829
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%)
Query: 3 KDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLD 62
++G+ PS N L L ++ M++ G+R D+ +Y ++ + +L
Sbjct: 682 EEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLI 741
Query: 63 KGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLI 122
EL M+ + P +Y +++ GL K + K+F+EM N+ PN + YN +I
Sbjct: 742 LASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVI 801
Query: 123 DGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGG 159
G+ + G +++AF L M P T++ L+ G
Sbjct: 802 AGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 2/132 (1%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M KDG+ + + L + L+ ++T+M G+ PD + Y V
Sbjct: 715 MLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQ 774
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
K ++ M+K V P+V +YN V+ G + + +A +L DEML + ++P+ T++
Sbjct: 775 FVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDI 834
Query: 121 LIDGYCKVGEME 132
L+ G +VG ++
Sbjct: 835 LVSG--QVGNLQ 844
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 195/393 (49%), Gaps = 12/393 (3%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M GV +V S+ + E L + EK + + GI+P+ +Y + A V +D
Sbjct: 215 MVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRD 274
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
++ M+K+ V + Y L++ K ++ DA KLFDEM R + + Y +
Sbjct: 275 FSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTS 334
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI C+ G M++AF L + PS TY L+ G+C G + A ++ EM+ G
Sbjct: 335 LISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKG 394
Query: 181 FLPGGFSRIVFDD--DSACSNGNGSLRANVAARIDERTYSA-------LLNGFCRVGRIE 231
+++VF+ D C G + + ++++ + A + + F R+ R +
Sbjct: 395 V---NITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYD 451
Query: 232 KAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLI 291
+AK+ L +++E GV S +SY L++ YC EG VE+A + +M +G++P+ +T+N +I
Sbjct: 452 EAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMI 511
Query: 292 NKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMK 351
+C+ G++ +A + M G+ P TY SLI+G N + + E+ KG+
Sbjct: 512 YAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLD 571
Query: 352 PNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
N ++Y +I+ L K K +A + +M +G
Sbjct: 572 QNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKG 604
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 179/371 (48%), Gaps = 16/371 (4%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G+ P + N + V + F V V M + G+ + V+Y +E +V +
Sbjct: 254 GIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDA 313
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
+L M + + V VY ++ C+ +K A LFDE+ + L P++ TY LIDG
Sbjct: 314 EKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDG 373
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
CKVGEM A L M++ + + +N L+ G C G V++A + ME GF
Sbjct: 374 VCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQAD 433
Query: 185 GFSRIVFDDDSACSNGNGSLRANVA-----------ARIDERTYSALLNGFCRVGRIEKA 233
VF ++ S N R + A ++ +Y+ L++ +C+ G +E+A
Sbjct: 434 -----VFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEA 488
Query: 234 KEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINK 293
K + ++ GV P+ I+YN+++ AYC +G +++A + ME G+ P T+ +LI+
Sbjct: 489 KRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHG 548
Query: 294 FCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPN 353
C VD+A R +M KG+ TY +I+G + + F + +E+++KG +
Sbjct: 549 ECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTID 608
Query: 354 VISYGSLINCL 364
Y +LI +
Sbjct: 609 NKVYTALIGSM 619
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 188/379 (49%), Gaps = 14/379 (3%)
Query: 16 LFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKER 75
+F V + FE+ L VF MV+ G+ D S + AA + +D E+ M
Sbjct: 160 VFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSG 219
Query: 76 VGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAF 135
V +V+ +V+ GLC+ V+ ++KL E + + P TYNT+I+ Y K +
Sbjct: 220 VKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVE 279
Query: 136 SLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGF---LPGGFSRIVFD 192
+ MK + +TY L+ +G+++DA ++ EM G + S I ++
Sbjct: 280 GVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWN 339
Query: 193 DDSACSNGNGSLRANVAARIDER-------TYSALLNGFCRVGRIEKAKEVLAKLVENGV 245
C GN + + E+ TY AL++G C+VG + A+ ++ ++ GV
Sbjct: 340 ----CRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGV 395
Query: 246 VPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAER 305
+Q+ +N L++ YC +G V++A + ME++G + T NT+ + F D+A++
Sbjct: 396 NITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQ 455
Query: 306 WVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLC 365
W+ +M+E G+ + +Y +LI+ Y + N + + E+ KG++PN I+Y +I C
Sbjct: 456 WLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYC 515
Query: 366 KDRKLLDAEIVLGDMASRG 384
K K+ +A + +M + G
Sbjct: 516 KQGKIKEARKLRANMEANG 534
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 88/181 (48%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G V + N + K++++ M+E G++ VSY ++ +
Sbjct: 425 MEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGN 484
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+++ L M + V P+ YN+++ CK ++K+ARKL M + P++ TY +
Sbjct: 485 VEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTS 544
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI G C +++A L + M + + +TY ++ GL +G+ ++A + EM+ G
Sbjct: 545 LIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKG 604
Query: 181 F 181
+
Sbjct: 605 Y 605
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 72/162 (44%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + GV S S L + E+ +F +M G++P+ ++Y + A
Sbjct: 460 MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ + +L ME + P + Y ++ G C V +A +LF EM + L N+VTY
Sbjct: 520 IKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTV 579
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCS 162
+I G K G+ ++AF L MK Y L+G + S
Sbjct: 580 MISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSMHS 621
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 113/240 (47%), Gaps = 7/240 (2%)
Query: 145 NAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSL 204
N +P + L L S+ R N+ R +L + +GF + R V + SA + + S
Sbjct: 92 NLKPDLTAVVTLSHRLYSNRRFNEMRSLLNSVVNDGF----YKRPVEELGSAMVDCDISE 147
Query: 205 RANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGY 264
E+ + + + G E+ V +V+ G+ + S + + A
Sbjct: 148 EKFEFF---EKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRR 204
Query: 265 VEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNS 324
++ ++ +M + G+K + + ++ C GEV+++++ +K+ KGI P TYN+
Sbjct: 205 IDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNT 264
Query: 325 LINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+IN Y + +F +L+ ++K G+ N ++Y L+ K+ K+ DAE + +M RG
Sbjct: 265 IINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERG 324
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 181/382 (47%), Gaps = 44/382 (11%)
Query: 9 SVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPD-------VVSYGKAVEAAVMLKDL 61
S + N L +L + + +F M G+ P+ V S+ + + L
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 62 DKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTL 121
+ FE+ GC V N +L L K+ RV+DA KLFDE L +T T+N L
Sbjct: 162 LQSFEVEGC---------CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNIL 212
Query: 122 IDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGF 181
I G C VG+ EKA L M EP ++TYN L+ G C S +N A E+ +++
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSG-- 270
Query: 182 LPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLV 241
S CS D TY+++++G+C+ G++ +A +L ++
Sbjct: 271 -------------SVCSP-------------DVVTYTSMISGYCKAGKMREASSLLDDML 304
Query: 242 ENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVD 301
G+ P+ +++N+LV+ Y G + A + +M G P VTF +LI+ +C G+V
Sbjct: 305 RLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVS 364
Query: 302 QAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
Q R ++M +G+ P TY+ LIN + +K E+L ++ K + P Y +I
Sbjct: 365 QGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVI 424
Query: 362 NCLCKDRKLLDAEIVLGDMASR 383
+ CK K+ +A +++ +M +
Sbjct: 425 DGFCKAGKVNEANVIVEEMEKK 446
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 169/355 (47%), Gaps = 30/355 (8%)
Query: 13 VNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCME 72
VN L TLV + E + +F + + D ++ + + +K EL+G M
Sbjct: 174 VNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 73 KERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLV-PNTVTYNTLIDGYCKVGEM 131
P + YN ++ G CK + A ++F ++ ++ P+ VTY ++I GYCK G+M
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 132 EKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVF 191
+A SL M P+ +T+N L+ G +G + A E+ +M G P
Sbjct: 294 REASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFP-------- 345
Query: 192 DDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQIS 251
D T+++L++G+CRVG++ + + ++ G+ P+ +
Sbjct: 346 ---------------------DVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFT 384
Query: 252 YNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKML 311
Y+IL+NA C+E + KA + Q+ + + P +N +I+ FC+ G+V++A V++M
Sbjct: 385 YSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEME 444
Query: 312 EKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCK 366
+K P T+ LI G+ + I ++ G P+ I+ SL++CL K
Sbjct: 445 KKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLK 499
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 151/303 (49%), Gaps = 11/303 (3%)
Query: 10 VRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMG 69
++ N L L G + EK L + M G PD+V+Y ++ +L+K E+
Sbjct: 206 TKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK 265
Query: 70 CMEKERV-GPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKV 128
++ V P V Y ++ G CK ++++A L D+ML + P VT+N L+DGY K
Sbjct: 266 DVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKA 325
Query: 129 GEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSR 188
GEM A ++ +M + P V+T+ L+ G C G+V+ + EM G P F+
Sbjct: 326 GEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTY 385
Query: 189 IVFDDDSACSNGNGSLRA-----NVAAR---IDERTYSALLNGFCRVGRIEKAKEVLAKL 240
+ + A N N L+A +A++ Y+ +++GFC+ G++ +A ++ ++
Sbjct: 386 SILIN--ALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+ P +I++ IL+ +C +G + +A+ +M G P +T ++L++ + G
Sbjct: 444 EKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMA 503
Query: 301 DQA 303
+A
Sbjct: 504 KEA 506
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 149/347 (42%), Gaps = 67/347 (19%)
Query: 73 KERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEME 132
K + S + YNL+ LCK A ++F+ M + PN L+ + + G++
Sbjct: 96 KLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLH 155
Query: 133 KAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFD 192
F+ +++ E + N LL L RV DA ++ FD
Sbjct: 156 --FATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKL------------------FD 195
Query: 193 DDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISY 252
+ + N D +T++ L+ G C VG+ EKA E+L + G P ++Y
Sbjct: 196 EHLRFQSCN-----------DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTY 244
Query: 253 NILVNAYCHEGYVEKAIQTAEQMEERGL-KPSYVTFNTLINKFCETGEVDQAERWVKKML 311
N L+ +C + KA + + ++ + P VT+ ++I+ +C+ G++ +A + ML
Sbjct: 245 NTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDML 304
Query: 312 EKGIAPTLETYNSLINGYG-----------------------------------RISNFV 336
GI PT T+N L++GY R+
Sbjct: 305 RLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVS 364
Query: 337 KCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
+ F + EE+ +GM PN +Y LIN LC + +LL A +LG +AS+
Sbjct: 365 QGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 91/183 (49%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G+ P+ + N L + + + + M+ G PDVV++ ++ +
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ 362
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ +GF L M + P+ F Y++++ LC R+ AR+L ++ ++++P YN
Sbjct: 363 VSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNP 422
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+IDG+CK G++ +A + M+ +P IT+ L+ G C GR+ +A + +M G
Sbjct: 423 VIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Query: 181 FLP 183
P
Sbjct: 483 CSP 485
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G P V + L + Q + ++ +M G+ P+ +Y + A L K
Sbjct: 342 GCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA 401
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
EL+G + + + P F+YN V+ G CK +V +A + +EM + P+ +T+ LI G
Sbjct: 402 RELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIG 461
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREV 172
+C G M +A S+ +M A P IT + LL L +G +A +
Sbjct: 462 HCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 181/382 (47%), Gaps = 44/382 (11%)
Query: 9 SVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPD-------VVSYGKAVEAAVMLKDL 61
S + N L +L + + +F M G+ P+ V S+ + + L
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 62 DKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTL 121
+ FE+ GC V N +L L K+ RV+DA KLFDE L +T T+N L
Sbjct: 162 LQSFEVEGC---------CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNIL 212
Query: 122 IDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGF 181
I G C VG+ EKA L M EP ++TYN L+ G C S +N A E+ +++
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSG-- 270
Query: 182 LPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLV 241
S CS D TY+++++G+C+ G++ +A +L ++
Sbjct: 271 -------------SVCSP-------------DVVTYTSMISGYCKAGKMREASSLLDDML 304
Query: 242 ENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVD 301
G+ P+ +++N+LV+ Y G + A + +M G P VTF +LI+ +C G+V
Sbjct: 305 RLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVS 364
Query: 302 QAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
Q R ++M +G+ P TY+ LIN + +K E+L ++ K + P Y +I
Sbjct: 365 QGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVI 424
Query: 362 NCLCKDRKLLDAEIVLGDMASR 383
+ CK K+ +A +++ +M +
Sbjct: 425 DGFCKAGKVNEANVIVEEMEKK 446
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 169/355 (47%), Gaps = 30/355 (8%)
Query: 13 VNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCME 72
VN L TLV + E + +F + + D ++ + + +K EL+G M
Sbjct: 174 VNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 73 KERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLV-PNTVTYNTLIDGYCKVGEM 131
P + YN ++ G CK + A ++F ++ ++ P+ VTY ++I GYCK G+M
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 132 EKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVF 191
+A SL M P+ +T+N L+ G +G + A E+ +M G P
Sbjct: 294 REASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFP-------- 345
Query: 192 DDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQIS 251
D T+++L++G+CRVG++ + + ++ G+ P+ +
Sbjct: 346 ---------------------DVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFT 384
Query: 252 YNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKML 311
Y+IL+NA C+E + KA + Q+ + + P +N +I+ FC+ G+V++A V++M
Sbjct: 385 YSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEME 444
Query: 312 EKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCK 366
+K P T+ LI G+ + I ++ G P+ I+ SL++CL K
Sbjct: 445 KKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLK 499
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 151/303 (49%), Gaps = 11/303 (3%)
Query: 10 VRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMG 69
++ N L L G + EK L + M G PD+V+Y ++ +L+K E+
Sbjct: 206 TKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK 265
Query: 70 CMEKERV-GPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKV 128
++ V P V Y ++ G CK ++++A L D+ML + P VT+N L+DGY K
Sbjct: 266 DVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKA 325
Query: 129 GEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSR 188
GEM A ++ +M + P V+T+ L+ G C G+V+ + EM G P F+
Sbjct: 326 GEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTY 385
Query: 189 IVFDDDSACSNGNGSLRA-----NVAAR---IDERTYSALLNGFCRVGRIEKAKEVLAKL 240
+ + A N N L+A +A++ Y+ +++GFC+ G++ +A ++ ++
Sbjct: 386 SILIN--ALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+ P +I++ IL+ +C +G + +A+ +M G P +T ++L++ + G
Sbjct: 444 EKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMA 503
Query: 301 DQA 303
+A
Sbjct: 504 KEA 506
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 149/347 (42%), Gaps = 67/347 (19%)
Query: 73 KERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEME 132
K + S + YNL+ LCK A ++F+ M + PN L+ + + G++
Sbjct: 96 KLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLH 155
Query: 133 KAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFD 192
F+ +++ E + N LL L RV DA ++ FD
Sbjct: 156 --FATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKL------------------FD 195
Query: 193 DDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISY 252
+ + N D +T++ L+ G C VG+ EKA E+L + G P ++Y
Sbjct: 196 EHLRFQSCN-----------DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTY 244
Query: 253 NILVNAYCHEGYVEKAIQTAEQMEERGL-KPSYVTFNTLINKFCETGEVDQAERWVKKML 311
N L+ +C + KA + + ++ + P VT+ ++I+ +C+ G++ +A + ML
Sbjct: 245 NTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDML 304
Query: 312 EKGIAPTLETYNSLINGYG-----------------------------------RISNFV 336
GI PT T+N L++GY R+
Sbjct: 305 RLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVS 364
Query: 337 KCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
+ F + EE+ +GM PN +Y LIN LC + +LL A +LG +AS+
Sbjct: 365 QGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 91/183 (49%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G+ P+ + N L + + + + M+ G PDVV++ ++ +
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ 362
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ +GF L M + P+ F Y++++ LC R+ AR+L ++ ++++P YN
Sbjct: 363 VSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNP 422
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+IDG+CK G++ +A + M+ +P IT+ L+ G C GR+ +A + +M G
Sbjct: 423 VIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Query: 181 FLP 183
P
Sbjct: 483 CSP 485
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G P V + L + Q + ++ +M G+ P+ +Y + A L K
Sbjct: 342 GCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA 401
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
EL+G + + + P F+YN V+ G CK +V +A + +EM + P+ +T+ LI G
Sbjct: 402 RELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIG 461
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREV 172
+C G M +A S+ +M A P IT + LL L +G +A +
Sbjct: 462 HCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 182/370 (49%), Gaps = 31/370 (8%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVES-GIRPDVVSYGKAVEAAVMLKDLDK 63
GV SVRS+N L L+ +++F+ V A+F + ES GI P++ + V+A D++
Sbjct: 150 GVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIES 209
Query: 64 GFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLID 123
++++ + + P++ Y +LGG ++ A+++ +EML R P+ TY L+D
Sbjct: 210 AYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMD 269
Query: 124 GYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP 183
GYCK+G +A ++ M+ EP+ +TY ++ LC + +AR + EM F+P
Sbjct: 270 GYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMP 329
Query: 184 GGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVEN 243
D S C +++ C ++++A + K+++N
Sbjct: 330 ---------DSSLCCK--------------------VIDALCEDHKVDEACGLWRKMLKN 360
Query: 244 GVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQA 303
+P + L++ C EG V +A + ++ E +G PS +T+NTLI CE GE+ +A
Sbjct: 361 NCMPDNALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEA 419
Query: 304 ERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINC 363
R M E+ P TYN LI G + N + +LEE+ + G PN ++ L
Sbjct: 420 GRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEG 479
Query: 364 LCKDRKLLDA 373
L K K DA
Sbjct: 480 LQKLGKEEDA 489
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 136/310 (43%), Gaps = 30/310 (9%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G++P++ + + V E V +M++ G PD +Y ++ L +
Sbjct: 221 GLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEA 280
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
+M MEK + P+ Y +++ LCK ++ +AR +FDEML R+ +P++ +ID
Sbjct: 281 ATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDA 340
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
C+ ++++A L +M N P + L+ LC GRV +AR++ E E G +P
Sbjct: 341 LCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIPS 399
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
TY+ L+ G C G + +A + + E
Sbjct: 400 LL-----------------------------TYNTLIAGMCEKGELTEAGRLWDDMYERK 430
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
P+ +YN+L+ G V++ ++ E+M E G P+ TF L + G+ + A
Sbjct: 431 CKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAM 490
Query: 305 RWVKKMLEKG 314
+ V + G
Sbjct: 491 KIVSMAVMNG 500
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 132/308 (42%), Gaps = 63/308 (20%)
Query: 111 LVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAR 170
+ PN T N L+ CK ++E A+ + + + P+++TY +LGG + G + A+
Sbjct: 187 ITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAK 246
Query: 171 EVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRI 230
VL EM G+ P D TY+ L++G+C++GR
Sbjct: 247 RVLEEMLDRGWYP-----------------------------DATTYTVLMDGYCKLGRF 277
Query: 231 EKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTL 290
+A V+ + +N + P++++Y +++ A C E +A ++M ER P +
Sbjct: 278 SEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKV 337
Query: 291 INKFCETGEVDQAERWVKKML----------------------------------EKGIA 316
I+ CE +VD+A +KML EKG
Sbjct: 338 IDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI 397
Query: 317 PTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIV 376
P+L TYN+LI G + + +++ ++ KPN +Y LI L K+ + + V
Sbjct: 398 PSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRV 457
Query: 377 LGDMASRG 384
L +M G
Sbjct: 458 LEEMLEIG 465
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 98/171 (57%), Gaps = 1/171 (0%)
Query: 215 RTYSALLNGFCRVGRIEKAKEVLAKLVEN-GVVPSQISYNILVNAYCHEGYVEKAIQTAE 273
R+ + LLN + R + + E+ G+ P+ + N+LV A C + +E A + +
Sbjct: 156 RSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLD 215
Query: 274 QMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRIS 333
++ GL P+ VT+ T++ + G+++ A+R +++ML++G P TY L++GY ++
Sbjct: 216 EIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLG 275
Query: 334 NFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
F + +++++EK ++PN ++YG +I LCK++K +A + +M R
Sbjct: 276 RFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERS 326
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 116/262 (44%), Gaps = 31/262 (11%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K+ + P+ + + L K+ + +F +M+E PD K ++A
Sbjct: 287 MEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHK 346
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D+ L M K P + + ++ LCK RV +ARKLFDE + +P+ +TYNT
Sbjct: 347 VDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNT 405
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI G C+ GE+ +A L M +P+ TYN L+ GL +G V + VL EM G
Sbjct: 406 LIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIG 465
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P ++ T+ L G ++G+ E A ++++
Sbjct: 466 CFP-----------------------------NKTTFLILFEGLQKLGKEEDAMKIVSMA 496
Query: 241 VENGVVPSQISYNILVNAYCHE 262
V NG V + S+ + + + E
Sbjct: 497 VMNGKVDKE-SWELFLKKFAGE 517
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 80/173 (46%), Gaps = 5/173 (2%)
Query: 216 TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNA---YCHEGYVEKAIQTA 272
TY ++L R + + ++A L N P + N+ ++ Y G E +++
Sbjct: 85 TYHSILFKLSRARAFDPVESLMADL-RNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIF 143
Query: 273 EQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK-GIAPTLETYNSLINGYGR 331
++ + G+K S + NTL+N + D K E GI P + T N L+ +
Sbjct: 144 LRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCK 203
Query: 332 ISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
++ +++L+EI G+ PN+++Y +++ + A+ VL +M RG
Sbjct: 204 KNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRG 256
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 181/368 (49%), Gaps = 30/368 (8%)
Query: 3 KDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLD 62
K G++PSV S N L L + L + +DM + G+ PD V+Y + +L +
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 63 KGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVT-YNTL 121
+E++ M + + P V Y ++L G C++ + L +ML R N++ + +
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Query: 122 IDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGF 181
+ G CK G +++A SL +MKA P ++ Y+ ++ GLC G+ + A + EM
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 182 LPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLV 241
LP + RT+ ALL G C+ G + +A+ +L L+
Sbjct: 430 LP-----------------------------NSRTHGALLLGLCQKGMLLEARSLLDSLI 460
Query: 242 ENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVD 301
+G + YNI+++ Y G +E+A++ + + E G+ PS TFN+LI +C+T +
Sbjct: 461 SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 520
Query: 302 QAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
+A + + + G+AP++ +Y +L++ Y N E+ E++ +G+ P ++Y +
Sbjct: 521 EARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIF 580
Query: 362 NCLCKDRK 369
LC+ K
Sbjct: 581 KGLCRGWK 588
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 176/384 (45%), Gaps = 19/384 (4%)
Query: 7 LPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFE 66
L S+ + + L + + ++ L++F M G+ PD+V+Y + L D
Sbjct: 360 LNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALW 419
Query: 67 LMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYC 126
L M +R+ P+ + +L GLC+ + +AR L D ++ + V YN +IDGY
Sbjct: 420 LYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYA 479
Query: 127 KVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGF 186
K G +E+A L + PSV T+N L+ G C + + +AR++L ++ G P
Sbjct: 480 KSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVV 539
Query: 187 SRIVFDDDSA-CSNGNG--SLRANVAAR---IDERTYSALLNGFCRVGR----------- 229
S D A C N LR + A TYS + G CR +
Sbjct: 540 SYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRER 599
Query: 230 -IEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFN 288
EK K+ L + G+ P QI+YN ++ C ++ A E M+ R L S T+N
Sbjct: 600 IFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYN 659
Query: 289 TLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKK 348
LI+ C G + +A+ ++ + E+ ++ + Y +LI + + ++ ++ +
Sbjct: 660 ILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHR 719
Query: 349 GMKPNVISYGSLINCLCKDRKLLD 372
G ++ Y ++IN LC+ R L++
Sbjct: 720 GFNVSIRDYSAVINRLCR-RHLMN 742
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 176/371 (47%), Gaps = 46/371 (12%)
Query: 47 SYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEM 106
+Y V+ + L+ + E + +GPSV +N ++ G CK+ V A+ F +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 107 LHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRV 166
L LVP+ ++N LI+G C VG + +A L + M EP +TYN L G G +
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 167 NDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTY--------S 218
+ A EV+ +M G P + + C GN + + + R + S
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLC-GQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367
Query: 219 ALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEER 278
+L+G C+ GRI++A + ++ +G+ P ++Y+I+++ C G + A+ ++M ++
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 279 GLKPS-----------------------------------YVTFNTLINKFCETGEVDQA 303
+ P+ V +N +I+ + ++G +++A
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 304 ERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINC 363
K ++E GI P++ T+NSLI GY + N + +IL+ I+ G+ P+V+SY +L++
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Query: 364 L--CKDRKLLD 372
C + K +D
Sbjct: 548 YANCGNTKSID 558
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 151/304 (49%), Gaps = 30/304 (9%)
Query: 82 VYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARM 141
Y+ V+ GLC+ ++++DA +++ P+ V++N+++ GYCK+G ++ A S +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 142 KAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGN 201
PSV ++N L+ GLC G + +A E+ +M +G P
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEP------------------ 290
Query: 202 GSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCH 261
D TY+ L GF +G I A EV+ +++ G+ P I+Y IL+ C
Sbjct: 291 -----------DSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339
Query: 262 EGYVEKAIQTAEQMEERGLK-PSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLE 320
G ++ + + M RG + S + + +++ C+TG +D+A +M G++P L
Sbjct: 340 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399
Query: 321 TYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDM 380
Y+ +I+G ++ F + +E+ K + PN ++G+L+ LC+ LL+A +L +
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 459
Query: 381 ASRG 384
S G
Sbjct: 460 ISSG 463
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 151/334 (45%), Gaps = 18/334 (5%)
Query: 6 VLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGF 65
+LP+ R+ L L + ++ ++ SG D+V Y ++ +++
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488
Query: 66 ELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGY 125
EL + + + PSV +N ++ G CK + + +ARK+ D + L P+ V+Y TL+D Y
Sbjct: 489 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 548
Query: 126 CKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGG 185
G + L+ MKA P+ +TY+ + GLC + + VL E
Sbjct: 549 ANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRE---------- 598
Query: 186 FSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGV 245
RI C G + + D+ TY+ ++ CRV + A L + +
Sbjct: 599 --RIF----EKCKQGLRDMESE-GIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNL 651
Query: 246 VPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAER 305
S +YNIL+++ C GY+ KA ++E+ + S + TLI C G+ + A +
Sbjct: 652 DASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVK 711
Query: 306 WVKKMLEKGIAPTLETYNSLINGYGRISNFVKCF 339
++L +G ++ Y+++IN R + + CF
Sbjct: 712 LFHQLLHRGFNVSIRDYSAVINRLCR-RHLMNCF 744
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 181/368 (49%), Gaps = 30/368 (8%)
Query: 3 KDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLD 62
K G++PSV S N L L + L + +DM + G+ PD V+Y + +L +
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 63 KGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVT-YNTL 121
+E++ M + + P V Y ++L G C++ + L +ML R N++ + +
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Query: 122 IDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGF 181
+ G CK G +++A SL +MKA P ++ Y+ ++ GLC G+ + A + EM
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 182 LPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLV 241
LP + RT+ ALL G C+ G + +A+ +L L+
Sbjct: 430 LP-----------------------------NSRTHGALLLGLCQKGMLLEARSLLDSLI 460
Query: 242 ENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVD 301
+G + YNI+++ Y G +E+A++ + + E G+ PS TFN+LI +C+T +
Sbjct: 461 SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 520
Query: 302 QAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
+A + + + G+AP++ +Y +L++ Y N E+ E++ +G+ P ++Y +
Sbjct: 521 EARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIF 580
Query: 362 NCLCKDRK 369
LC+ K
Sbjct: 581 KGLCRGWK 588
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 176/384 (45%), Gaps = 19/384 (4%)
Query: 7 LPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFE 66
L S+ + + L + + ++ L++F M G+ PD+V+Y + L D
Sbjct: 360 LNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALW 419
Query: 67 LMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYC 126
L M +R+ P+ + +L GLC+ + +AR L D ++ + V YN +IDGY
Sbjct: 420 LYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYA 479
Query: 127 KVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGF 186
K G +E+A L + PSV T+N L+ G C + + +AR++L ++ G P
Sbjct: 480 KSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVV 539
Query: 187 SRIVFDDDSA-CSNGNG--SLRANVAAR---IDERTYSALLNGFCRVGR----------- 229
S D A C N LR + A TYS + G CR +
Sbjct: 540 SYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRER 599
Query: 230 -IEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFN 288
EK K+ L + G+ P QI+YN ++ C ++ A E M+ R L S T+N
Sbjct: 600 IFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYN 659
Query: 289 TLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKK 348
LI+ C G + +A+ ++ + E+ ++ + Y +LI + + ++ ++ +
Sbjct: 660 ILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHR 719
Query: 349 GMKPNVISYGSLINCLCKDRKLLD 372
G ++ Y ++IN LC+ R L++
Sbjct: 720 GFNVSIRDYSAVINRLCR-RHLMN 742
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 176/371 (47%), Gaps = 46/371 (12%)
Query: 47 SYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEM 106
+Y V+ + L+ + E + +GPSV +N ++ G CK+ V A+ F +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 107 LHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRV 166
L LVP+ ++N LI+G C VG + +A L + M EP +TYN L G G +
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 167 NDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTY--------S 218
+ A EV+ +M G P + + C GN + + + R + S
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLC-GQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367
Query: 219 ALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEER 278
+L+G C+ GRI++A + ++ +G+ P ++Y+I+++ C G + A+ ++M ++
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 279 GLKPS-----------------------------------YVTFNTLINKFCETGEVDQA 303
+ P+ V +N +I+ + ++G +++A
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 304 ERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINC 363
K ++E GI P++ T+NSLI GY + N + +IL+ I+ G+ P+V+SY +L++
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Query: 364 L--CKDRKLLD 372
C + K +D
Sbjct: 548 YANCGNTKSID 558
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 151/303 (49%), Gaps = 30/303 (9%)
Query: 83 YNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMK 142
Y+ V+ GLC+ ++++DA +++ P+ V++N+++ GYCK+G ++ A S +
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 143 APNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNG 202
PSV ++N L+ GLC G + +A E+ +M +G P
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEP------------------- 290
Query: 203 SLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHE 262
D TY+ L GF +G I A EV+ +++ G+ P I+Y IL+ C
Sbjct: 291 ----------DSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQL 340
Query: 263 GYVEKAIQTAEQMEERGLK-PSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLET 321
G ++ + + M RG + S + + +++ C+TG +D+A +M G++P L
Sbjct: 341 GNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVA 400
Query: 322 YNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMA 381
Y+ +I+G ++ F + +E+ K + PN ++G+L+ LC+ LL+A +L +
Sbjct: 401 YSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLI 460
Query: 382 SRG 384
S G
Sbjct: 461 SSG 463
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 151/334 (45%), Gaps = 18/334 (5%)
Query: 6 VLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGF 65
+LP+ R+ L L + ++ ++ SG D+V Y ++ +++
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488
Query: 66 ELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGY 125
EL + + + PSV +N ++ G CK + + +ARK+ D + L P+ V+Y TL+D Y
Sbjct: 489 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 548
Query: 126 CKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGG 185
G + L+ MKA P+ +TY+ + GLC + + VL E
Sbjct: 549 ANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRE---------- 598
Query: 186 FSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGV 245
RI C G + + D+ TY+ ++ CRV + A L + +
Sbjct: 599 --RIF----EKCKQGLRDMESE-GIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNL 651
Query: 246 VPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAER 305
S +YNIL+++ C GY+ KA ++E+ + S + TLI C G+ + A +
Sbjct: 652 DASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVK 711
Query: 306 WVKKMLEKGIAPTLETYNSLINGYGRISNFVKCF 339
++L +G ++ Y+++IN R + + CF
Sbjct: 712 LFHQLLHRGFNVSIRDYSAVINRLCR-RHLMNCF 744
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 180/384 (46%), Gaps = 29/384 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
+R+ G+ P R+ N L + V + + ++ ++M + G+ PD +Y ++A V
Sbjct: 330 LRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGR 389
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ ++ ME V P+ FV++ +L G + ++ EM + P+ YN
Sbjct: 390 WESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNV 449
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+ID + K ++ A + RM + EP +T+N L+ C GR A E+ ME G
Sbjct: 450 VIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRG 509
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
LP C+ TY+ ++N + R + K +L K+
Sbjct: 510 CLP-------------CAT----------------TYNIMINSYGDQERWDDMKRLLGKM 540
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
G++P+ +++ LV+ Y G AI+ E+M+ GLKPS +N LIN + + G
Sbjct: 541 KSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLS 600
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
+QA + M G+ P+L NSLIN +G + F +L+ +++ G+KP+V++Y +L
Sbjct: 601 EQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTL 660
Query: 361 INCLCKDRKLLDAEIVLGDMASRG 384
+ L + K +V +M G
Sbjct: 661 MKALIRVDKFQKVPVVYEEMIMSG 684
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 175/374 (46%), Gaps = 8/374 (2%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKV--LAVFTDMVESGIRPDVVSYGKAVEAAVML 58
MR+DG + + + ++L S + + V L ++ ++ + DV +
Sbjct: 223 MRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKS 282
Query: 59 KDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTY 118
D K +L+G + + ++ L R +A LF+E+ + P T Y
Sbjct: 283 GDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAY 342
Query: 119 NTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEG 178
N L+ GY K G ++ A S+ + M+ P TY+ L+ ++GR AR VL EME
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402
Query: 179 NGFLPGG--FSRIV--FDDDSACSNGNGSLR--ANVAARIDERTYSALLNGFCRVGRIEK 232
P FSR++ F D L+ ++ + D + Y+ +++ F + ++
Sbjct: 403 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDH 462
Query: 233 AKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLIN 292
A +++ G+ P ++++N L++ +C G A + E ME RG P T+N +IN
Sbjct: 463 AMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMIN 522
Query: 293 KFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKP 352
+ + D +R + KM +GI P + T+ +L++ YG+ F E LEE++ G+KP
Sbjct: 523 SYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 582
Query: 353 NVISYGSLINCLCK 366
+ Y +LIN +
Sbjct: 583 SSTMYNALINAYAQ 596
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 157/353 (44%), Gaps = 29/353 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K GV P + + L + V + ++E V +M ++P+ + + + +
Sbjct: 365 MEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGE 424
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
K F+++ M+ V P YN+V+ K + A FD ML + P+ VT+NT
Sbjct: 425 WQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNT 484
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LID +CK G A + M+ P TYN ++ R +D + +L +M+ G
Sbjct: 485 LIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQG 544
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
LP NV T++ L++ + + GR A E L ++
Sbjct: 545 ILP-----------------------NVV------THTTLVDVYGKSGRFNDAIECLEEM 575
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
G+ PS YN L+NAY G E+A+ M GLKPS + N+LIN F E
Sbjct: 576 KSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRD 635
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPN 353
+A ++ M E G+ P + TY +L+ R+ F K + EE+ G KP+
Sbjct: 636 AEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 688
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 163/350 (46%), Gaps = 50/350 (14%)
Query: 81 FVYNLVLGGLCKVRRVKDARKLFDEML---HRNLVPNTVTYNTLIDGYCKVGEMEKAFSL 137
F Y L+ L + + + KL++ L + L P +TYN LI + ++EKA +L
Sbjct: 164 FSYELLYSIL--IHALGRSEKLYEAFLLSQKQTLTP--LTYNALIGACARNNDIEKALNL 219
Query: 138 KARMKAPNAEPSVITYNCLLGGLCSSGRVN-------------DAREVLVEMEGN---GF 181
A+M+ + + Y+ ++ L S +++ D E+ V++ + GF
Sbjct: 220 IAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGF 279
Query: 182 LPGG-----FSRIVFDDDSACSNGNGSLRANVAARIDE---------------------- 214
G + + S +L + ++A D
Sbjct: 280 AKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRT 339
Query: 215 RTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQ 274
R Y+ALL G+ + G ++ A+ +++++ + GV P + +Y++L++AY + G E A ++
Sbjct: 340 RAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKE 399
Query: 275 MEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISN 334
ME ++P+ F+ L+ F + GE + + +K+M G+ P + YN +I+ +G+ +
Sbjct: 400 MEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNC 459
Query: 335 FVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ + +G++P+ +++ +LI+C CK + + AE + M RG
Sbjct: 460 LDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRG 509
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 183/368 (49%), Gaps = 16/368 (4%)
Query: 10 VRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMG 69
VRS +L L+ + ++ ++F ++E G +P +++Y V A K L+
Sbjct: 319 VRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLIS 378
Query: 70 CMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVG 129
+EK + P ++N ++ + + A K+F++M P T+NTLI GY K+G
Sbjct: 379 KVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIG 438
Query: 130 EMEKAFSLKARM-KAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG---- 184
++E++ L M + +P+ T N L+ C+ ++ +A ++ +M+ G P
Sbjct: 439 KLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTF 498
Query: 185 -----GFSRIVFDDDSACSNGNGSLRANVAARIDE--RTYSALLNGFCRVGRIEKAKEVL 237
++RI S C+ + + + ++ RT ++NG+C G++E+A
Sbjct: 499 NTLAKAYARI----GSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFF 554
Query: 238 AKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCET 297
++ E GV P+ +N L+ + + ++ + + MEE G+KP VTF+TL+N +
Sbjct: 555 YRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSV 614
Query: 298 GEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISY 357
G++ + E MLE GI P + ++ L GY R K +IL ++ K G++PNV+ Y
Sbjct: 615 GDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIY 674
Query: 358 GSLINCLC 365
+I+ C
Sbjct: 675 TQIISGWC 682
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 190/398 (47%), Gaps = 50/398 (12%)
Query: 3 KDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLD 62
++G PS+ + L L K F +L++ + + ++G++PD + + + A+ +LD
Sbjct: 347 EEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLD 406
Query: 63 KGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLV-PNTVTYNTL 121
+ ++ M++ P+ +N ++ G K+ +++++ +L D ML ++ PN T N L
Sbjct: 407 QAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNIL 466
Query: 122 IDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCL------------------------- 156
+ +C ++E+A+++ +M++ +P V+T+N L
Sbjct: 467 VQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNK 526
Query: 157 -----------LGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDD------DSACSN 199
+ G C G++ +A M+ G P F VF+ + +
Sbjct: 527 VKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLF---VFNSLIKGFLNINDMD 583
Query: 200 GNG---SLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILV 256
G G L + D T+S L+N + VG +++ +E+ ++E G+ P +++IL
Sbjct: 584 GVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILA 643
Query: 257 NAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLE-KGI 315
Y G EKA Q QM + G++P+ V + +I+ +C GE+ +A + KKM G+
Sbjct: 644 KGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGL 703
Query: 316 APTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPN 353
+P L TY +LI G+G K E+L+++E K + P
Sbjct: 704 SPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPT 741
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 154/334 (46%), Gaps = 31/334 (9%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
+R + + P+ R+ N L + ++ E+ + M G++PDVV++ +A +
Sbjct: 451 LRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGS 510
Query: 61 LDKGFELM-GCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYN 119
+++ M +V P+V ++ G C+ ++++A + F M + PN +N
Sbjct: 511 TCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFN 570
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN 179
+LI G+ + +M+ + M+ +P V+T++ L+ S G + E+ +M
Sbjct: 571 SLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEG 630
Query: 180 GFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAK 239
G P D +S L G+ R G EKA+++L +
Sbjct: 631 GIDP-----------------------------DIHAFSILAKGYARAGEPEKAEQILNQ 661
Query: 240 LVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQM-EERGLKPSYVTFNTLINKFCETG 298
+ + GV P+ + Y +++ +C G ++KA+Q ++M GL P+ T+ TLI F E
Sbjct: 662 MRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAK 721
Query: 299 EVDQAERWVKKMLEKGIAPTLETYNSLINGYGRI 332
+ +AE +K M K + PT +T + +G+ I
Sbjct: 722 QPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSI 755
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 1/173 (0%)
Query: 213 DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTA 272
D R+ + L+NG GR ++A + L+E G PS I+Y LV A + + +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 273 EQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRI 332
++E+ GLKP + FN +IN E+G +DQA + +KM E G PT T+N+LI GYG+I
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 333 SNFVKCFEILEEIEKKGM-KPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ +L+ + + M +PN + L+ C RK+ +A ++ M S G
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYG 490
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 1/168 (0%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + GV P V + + L ++ ++TDM+E GI PD+ ++ + +
Sbjct: 592 MEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGE 651
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLH-RNLVPNTVTYN 119
+K +++ M K V P+V +Y ++ G C +K A +++ +M L PN TY
Sbjct: 652 PEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYE 711
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVN 167
TLI G+ + + KA L M+ N P+ T + G S G N
Sbjct: 712 TLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIGVSN 759
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 184/375 (49%), Gaps = 15/375 (4%)
Query: 8 PSVRSVNRLFETLV---GSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
P++ + N L LV S VF DMV+ G+ +V ++ V + L+
Sbjct: 164 PNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDA 223
Query: 65 FELMGCMEKE-RVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLID 123
++ M E +V P YN +L + K R+ D ++L +M LVPN VTYN L+
Sbjct: 224 LGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVY 283
Query: 124 GYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP 183
GYCK+G +++AF + MK N P + TYN L+ GLC++G + + E++ M+ P
Sbjct: 284 GYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQP 343
Query: 184 GGFSRIVFDDDSACSNGNGSLRA--------NVAARIDERTYSALLNGFCRVGRIEKAKE 235
+ D C SL A N + ++ T++ L C+ + E
Sbjct: 344 DVVTYNTLID--GCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTR 401
Query: 236 VLAKLVE-NGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
+ +LV+ +G P ++Y+ L+ AY G + A++ +M ++G+K + +T NT+++
Sbjct: 402 KVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDAL 461
Query: 295 CETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNV 354
C+ ++D+A + ++G TY +LI G+ R K E+ +E++K + P V
Sbjct: 462 CKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTV 521
Query: 355 ISYGSLINCLCKDRK 369
++ SLI LC K
Sbjct: 522 STFNSLIGGLCHHGK 536
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 165/329 (50%), Gaps = 33/329 (10%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVE-SGIRPDVVSYGKAVEAAVMLK 59
M DGV + + N + L ++ E V ++V+ G PD+V+Y ++A + +
Sbjct: 371 MENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVG 430
Query: 60 DLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYN 119
DL E+M M ++ + + N +L LCK R++ +A L + R + + VTY
Sbjct: 431 DLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYG 490
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN 179
TLI G+ + ++EKA + MK P+V T+N L+GGLC G+ A E E+ +
Sbjct: 491 TLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAES 550
Query: 180 GFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAK 239
G LP D+ T+++++ G+C+ GR+EKA E +
Sbjct: 551 GLLP-----------------------------DDSTFNSIILGYCKEGRVEKAFEFYNE 581
Query: 240 LVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQM-EERGLKPSYVTFNTLINKFCETG 298
+++ P + NIL+N C EG EKA+ + EER + VT+NT+I+ FC+
Sbjct: 582 SIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV--DTVTYNTMISAFCKDK 639
Query: 299 EVDQAERWVKKMLEKGIAPTLETYNSLIN 327
++ +A + +M EKG+ P TYNS I+
Sbjct: 640 KLKEAYDLLSEMEEKGLEPDRFTYNSFIS 668
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 193/393 (49%), Gaps = 14/393 (3%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M++ VLP + + N L L + + L + M ++PDVV+Y ++ L
Sbjct: 301 MKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGL 360
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKV-RRVKDARKLFDEMLHRNLVPNTVTYN 119
+ +LM ME + V + +N+ L LCK +R RK+ + + P+ VTY+
Sbjct: 361 SLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYH 420
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN 179
TLI Y KVG++ A + M + + IT N +L LC ++++A +L
Sbjct: 421 TLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKR 480
Query: 180 GF---------LPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRI 230
GF L GF R + A + + + + T+++L+ G C G+
Sbjct: 481 GFIVDEVTYGTLIMGFFREE-KVEKALEMWDEMKKVKITPTVS--TFNSLIGGLCHHGKT 537
Query: 231 EKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTL 290
E A E +L E+G++P ++N ++ YC EG VEKA + + + KP T N L
Sbjct: 538 ELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNIL 597
Query: 291 INKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGM 350
+N C+ G ++A + ++E+ T+ TYN++I+ + + + +++L E+E+KG+
Sbjct: 598 LNGLCKEGMTEKALNFFNTLIEEREVDTV-TYNTMISAFCKDKKLKEAYDLLSEMEEKGL 656
Query: 351 KPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
+P+ +Y S I+ L +D KL + + +L + +
Sbjct: 657 EPDRFTYNSFISLLMEDGKLSETDELLKKFSGK 689
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 193/418 (46%), Gaps = 41/418 (9%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P + N + + + + + + DM ++G+ P+ V+Y V L L + F++
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
+ M++ V P + YN+++ GLC +++ +L D M L P+ VTYNTLIDG +
Sbjct: 298 VELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFE 357
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLC-SSGRVNDAREVLVEMEGNGFLPGGF 186
+G +A L +M+ + + +T+N L LC R R+V ++ +GF P
Sbjct: 358 LGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIV 417
Query: 187 S-RIVFDDDSACSNGNGSLR-----ANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
+ + + +G+L +++ T + +L+ C+ ++++A +L
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSA 477
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+ G + +++Y L+ + E VEKA++ ++M++ + P+ TFN+LI C G+
Sbjct: 478 HKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKT 537
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKP-------- 352
+ A ++ E G+ P T+NS+I GY + K FE E K KP
Sbjct: 538 ELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNIL 597
Query: 353 --------------------------NVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ ++Y ++I+ CKD+KL +A +L +M +G
Sbjct: 598 LNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKG 655
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 138/295 (46%), Gaps = 31/295 (10%)
Query: 78 PSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG---YCKVGEMEKA 134
PS ++++ L + A ++F +M+ L PN +T NTL+ G Y + A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 135 FSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDD 194
+ M +V T+N L+ G C G++ DA G R+V
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDAL-------------GMLERMV---- 231
Query: 195 SACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNI 254
+ D TY+ +L + GR+ KE+L + +NG+VP++++YN
Sbjct: 232 -----------SEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNN 280
Query: 255 LVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKG 314
LV YC G +++A Q E M++ + P T+N LIN C G + + + M
Sbjct: 281 LVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLK 340
Query: 315 IAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRK 369
+ P + TYN+LI+G + ++ +++E++E G+K N +++ + LCK+ K
Sbjct: 341 LQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEK 395
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 108/235 (45%), Gaps = 13/235 (5%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+K + P+V + N L L + E + F ++ ESG+ PD ++ +
Sbjct: 512 MKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGR 571
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
++K FE K P + N++L GLCK + A F+ ++ V +TVTYNT
Sbjct: 572 VEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNT 630
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+I +CK ++++A+ L + M+ EP TYN + L G++++ E+L + G
Sbjct: 631 MISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKF 690
Query: 181 FLPGGFSR---IVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEK 232
G R + + + A S L A YS +++ C GR+++
Sbjct: 691 ---GSMKRDLQVETEKNPATSESKEELNTEAIA------YSDVIDELCSRGRLKE 736
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 183/396 (46%), Gaps = 17/396 (4%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G +P + + N + L + + F MV+ G PDVVSY +
Sbjct: 105 METLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGK 164
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVP-NTVTYN 119
+ E+ M + V P ++ GLC R+V A ++ E + V +TV YN
Sbjct: 165 VTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYN 224
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN 179
LI G+CK G +EKA +LK+ M EP ++TYN LL + + A V+ EM +
Sbjct: 225 ALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRS 284
Query: 180 GFLPGGFS---------RIVFDDDSACSNGNGSLRANVAAR--IDERTYSALLNGFCRVG 228
G +S R+ D C N + + R D +YS L+ FCR
Sbjct: 285 GIQLDAYSYNQLLKRHCRVSHPD--KCYN---FMVKEMEPRGFCDVVSYSTLIETFCRAS 339
Query: 229 RIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFN 288
KA + ++ + G+V + ++Y L+ A+ EG A + +QM E GL P + +
Sbjct: 340 NTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYT 399
Query: 289 TLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKK 348
T+++ C++G VD+A M+E I P +YNSLI+G R + ++ E+++ K
Sbjct: 400 TILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGK 459
Query: 349 GMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
P+ +++ +I L + +KL A V M +G
Sbjct: 460 ECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKG 495
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 171/372 (45%), Gaps = 36/372 (9%)
Query: 14 NRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEK 73
NR LV +FE A++ DM G +Y + + +K D L+ ME
Sbjct: 48 NRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMET 107
Query: 74 ERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEK 133
P ++ +N+ L LC+ +V A + F M+ R P+ V+Y LI+G + G++
Sbjct: 108 LGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTD 167
Query: 134 AFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDD 193
A + M P L+ GLC + +V+ A E++ E +
Sbjct: 168 AVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSA------------- 214
Query: 194 DSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYN 253
++ Y+AL++GFC+ GRIEKA+ + + + + G P ++YN
Sbjct: 215 ---------------RVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYN 259
Query: 254 ILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERW-VKKMLE 312
+L+N Y +++A +M G++ ++N L+ + C D+ + VK+M
Sbjct: 260 VLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEP 319
Query: 313 KGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKD----- 367
+G + +Y++LI + R SN K + + EE+ +KGM NV++Y SLI ++
Sbjct: 320 RGFCDVV-SYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSV 378
Query: 368 -RKLLDAEIVLG 378
+KLLD LG
Sbjct: 379 AKKLLDQMTELG 390
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 150/355 (42%), Gaps = 44/355 (12%)
Query: 73 KERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEME 132
+ +G Y + L K + +A ++FDEM H + + YN I + E
Sbjct: 2 HQTLGAVRLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFE 61
Query: 133 KAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFD 192
A ++ MK TY+ + GLC + + +L +ME GF+P ++ V+
Sbjct: 62 LAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYL 121
Query: 193 DDSACSNGNGSLRANVAARI------DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVV 246
D N G + D +Y+ L+NG R G++ A E+ ++ +GV
Sbjct: 122 DLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVS 181
Query: 247 P------------------------------------SQISYNILVNAYCHEGYVEKAIQ 270
P S + YN L++ +C G +EKA
Sbjct: 182 PDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEA 241
Query: 271 TAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYG 330
M + G +P VT+N L+N + + + +AE + +M+ GI +YN L+ +
Sbjct: 242 LKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHC 301
Query: 331 RISNFVKCFEIL-EEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
R+S+ KC+ + +E+E +G +V+SY +LI C+ A + +M +G
Sbjct: 302 RVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETFCRASNTRKAYRLFEEMRQKG 355
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 153/373 (41%), Gaps = 48/373 (12%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G P V S L L + + + ++ M+ SG+ PD + V +
Sbjct: 140 MVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARK 199
Query: 61 LDKGFELMGC-MEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYN 119
+D +E++ ++ RV S VYN ++ G CK R++ A L M P+ VTYN
Sbjct: 200 VDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYN 259
Query: 120 TLIDGY-----------------------------------CKVGEMEKAFSLKARMKAP 144
L++ Y C+V +K ++ + P
Sbjct: 260 VLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEP 319
Query: 145 NAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG--GFSRIVFDDDSACSNGNG 202
V++Y+ L+ C + A + EM G + ++ ++ + GN
Sbjct: 320 RGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLI---KAFLREGNS 376
Query: 203 SLRANVAARI-------DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNIL 255
S+ + ++ D Y+ +L+ C+ G ++KA V ++E+ + P ISYN L
Sbjct: 377 SVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSL 436
Query: 256 VNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGI 315
++ C G V +AI+ E M+ + P +TF +I ++ A + +M++KG
Sbjct: 437 ISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGF 496
Query: 316 APTLETYNSLING 328
+ ++LI
Sbjct: 497 TLDRDVSDTLIKA 509
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 121/295 (41%), Gaps = 29/295 (9%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K G P + + N L + ++ V +MV SGI+ D SY + ++ +
Sbjct: 246 MSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSH 305
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
DK + M + R V Y+ ++ C+ + A +LF+EM + +V N VTY +
Sbjct: 306 PDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTS 365
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI + + G A L +M P I Y +L LC SG V+ A V +M +
Sbjct: 366 LIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHE 425
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P D +Y++L++G CR GR+ +A ++ +
Sbjct: 426 ITP-----------------------------DAISYNSLISGLCRSGRVTEAIKLFEDM 456
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFC 295
P ++++ ++ + A + +QM ++G +TLI C
Sbjct: 457 KGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 58/129 (44%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G+ P + + L S +K VF DM+E I PD +SY +
Sbjct: 386 MTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGR 445
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ + +L M+ + P + ++GGL + +++ A K++D+M+ + + +T
Sbjct: 446 VTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDT 505
Query: 121 LIDGYCKVG 129
LI C +
Sbjct: 506 LIKASCSMS 514
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 192/417 (46%), Gaps = 47/417 (11%)
Query: 12 SVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCM 71
+ N L + S + ++ + V +MV +G P +V+Y + A LD+ EL M
Sbjct: 316 TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM 375
Query: 72 EKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEM 131
++ P VF Y +L G + +V+ A +F+EM + PN T+N I Y G+
Sbjct: 376 AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKF 435
Query: 132 EKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVF 191
+ + + P ++T+N LL +G ++ V EM+ GF+P R F
Sbjct: 436 TEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP---ERETF 492
Query: 192 DDDSACSNGNGSLRA---------NVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVE 242
+ + + GS + D TY+ +L R G E++++VLA++ +
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Query: 243 NGVVPSQISYNILVNAYC---------------HEGYVE--------------------K 267
P++++Y L++AY + G +E +
Sbjct: 553 GRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPE 612
Query: 268 AIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLIN 327
A + +++ERG P T N++++ + V +A + M E+G P++ TYNSL+
Sbjct: 613 AERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMY 672
Query: 328 GYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ R ++F K EIL EI KG+KP++ISY ++I C++ ++ DA + +M + G
Sbjct: 673 MHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSG 729
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 171/381 (44%), Gaps = 30/381 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEA-AVMLK 59
+++DG V S L S ++ + + VF M E G +P +++Y + M
Sbjct: 199 LQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGT 258
Query: 60 DLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYN 119
+K L+ M+ + + P + YN ++ + ++A ++F+EM + VTYN
Sbjct: 259 PWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYN 318
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN 179
L+D Y K ++A + M PS++TYN L+ G +++A E+ +M
Sbjct: 319 ALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEK 378
Query: 180 GFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAK 239
G P F TY+ LL+GF R G++E A + +
Sbjct: 379 GTKPDVF-----------------------------TYTTLLSGFERAGKVESAMSIFEE 409
Query: 240 LVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGE 299
+ G P+ ++N + Y + G + ++ +++ GL P VT+NTL+ F + G
Sbjct: 410 MRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGM 469
Query: 300 VDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGS 359
+ K+M G P ET+N+LI+ Y R +F + + + G+ P++ +Y +
Sbjct: 470 DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNT 529
Query: 360 LINCLCKDRKLLDAEIVLGDM 380
++ L + +E VL +M
Sbjct: 530 VLAALARGGMWEQSEKVLAEM 550
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 175/368 (47%), Gaps = 57/368 (15%)
Query: 15 RLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSY----GKAVEAAVMLKDL-DKGFELMG 69
R F+ + K ++ M+++ + ++S G+ AA M L + GF L
Sbjct: 156 RAFDWFMKQKDYQS-------MLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSL-- 206
Query: 70 CMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVG 129
V+ Y ++ R ++A +F +M P +TYN +++ + K+G
Sbjct: 207 ---------DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMG 257
Query: 130 -EMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVN-DAREVLVEMEGNGFLPGGFS 187
K SL +MK+ P TYN L+ C G ++ +A +V EM+ GF
Sbjct: 258 TPWNKITSLVEKMKSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGF------ 310
Query: 188 RIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVP 247
D+ TY+ALL+ + + R ++A +VL ++V NG P
Sbjct: 311 -----------------------SYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSP 347
Query: 248 SQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWV 307
S ++YN L++AY +G +++A++ QM E+G KP T+ TL++ F G+V+ A
Sbjct: 348 SIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIF 407
Query: 308 KKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKD 367
++M G P + T+N+ I YG F + +I +EI G+ P+++++ +L+ ++
Sbjct: 408 EEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQN 467
Query: 368 RKLLDAEI 375
+D+E+
Sbjct: 468 G--MDSEV 473
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 179/424 (42%), Gaps = 47/424 (11%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G P V + L + + E +++F +M +G +P++ ++ ++ M +
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIK---MYGN 431
Query: 61 LDKGFELMGCMEKERV---GPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVT 117
K E+M ++ V P + +N +L + + +F EM VP T
Sbjct: 432 RGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERET 491
Query: 118 YNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREV----- 172
+NTLI Y + G E+A ++ RM P + TYN +L L G + +V
Sbjct: 492 FNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEME 551
Query: 173 -------------LVEMEGNGFLPGGFSRIVFDDDSA---------------CSNGNGSL 204
L+ NG G + + S CS +
Sbjct: 552 DGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLP 611
Query: 205 RANVA-ARIDERTYS-------ALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILV 256
A A + + ER +S ++++ + R + KA VL + E G PS +YN L+
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Query: 257 NAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIA 316
+ K+ + ++ +G+KP +++NT+I +C + A R +M GI
Sbjct: 672 YMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIV 731
Query: 317 PTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIV 376
P + TYN+ I Y S F + ++ + K G +PN +Y S+++ CK + +A++
Sbjct: 732 PDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLF 791
Query: 377 LGDM 380
+ D+
Sbjct: 792 VEDL 795
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 140/304 (46%), Gaps = 37/304 (12%)
Query: 87 LGGLCKVRRVKDARKLFDEML----HRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMK 142
L GL ++ A + FD + +++++ N+V +I K G + A ++ ++
Sbjct: 142 LKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVV-AIIISMLGKEGRVSSAANMFNGLQ 200
Query: 143 APNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNG 202
V +Y L+ +SGR +A V +ME +G P
Sbjct: 201 EDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLI---------------- 244
Query: 203 SLRANVAARIDERTYSALLNGFCRVGR-IEKAKEVLAKLVENGVVPSQISYNILVNAYCH 261
TY+ +LN F ++G K ++ K+ +G+ P +YN L+ C
Sbjct: 245 -------------TYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITC-CK 290
Query: 262 EGYV-EKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLE 320
G + ++A Q E+M+ G VT+N L++ + ++ +A + + +M+ G +P++
Sbjct: 291 RGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIV 350
Query: 321 TYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDM 380
TYNSLI+ Y R + E+ ++ +KG KP+V +Y +L++ + K+ A + +M
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410
Query: 381 ASRG 384
+ G
Sbjct: 411 RNAG 414
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G+ P + S N + + + +F++M SGI PDV++Y + + ++
Sbjct: 694 GIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEA 753
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPN 114
++ M K P+ YN ++ G CK+ R KD KLF E L RNL P+
Sbjct: 754 IGVVRYMIKHGCRPNQNTYNSIVDGYCKLNR-KDEAKLFVEDL-RNLDPH 801
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 173/318 (54%), Gaps = 19/318 (5%)
Query: 27 EKVLAVFTDMVESGIRPDVVSYGKAVEA----AVMLKDLDKGFELMGCMEKERVGPSVFV 82
E+ ++VF M E G+RP++V+Y ++A + K + K F+ M++ V P
Sbjct: 285 EEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE---MQRNGVQPDRIT 341
Query: 83 YNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMK 142
+N +L + + AR LFDEM +R + + +YNTL+D CK G+M+ AF + A+M
Sbjct: 342 FNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMP 401
Query: 143 APNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNG 202
P+V++Y+ ++ G +GR ++A + EM +L R+ ++ + G
Sbjct: 402 VKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR---YLGIALDRVSYNTLLSIYTKVG 458
Query: 203 S-------LR--ANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYN 253
LR A+V + D TY+ALL G+ + G+ ++ K+V ++ V+P+ ++Y+
Sbjct: 459 RSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYS 518
Query: 254 ILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK 313
L++ Y G ++A++ + + GL+ V ++ LI+ C+ G V A + +M ++
Sbjct: 519 TLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE 578
Query: 314 GIAPTLETYNSLINGYGR 331
GI+P + TYNS+I+ +GR
Sbjct: 579 GISPNVVTYNSIIDAFGR 596
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 184/401 (45%), Gaps = 50/401 (12%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+++GV P + N L +E +F +M I DV SY ++A
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D FE++ M +R+ P+V Y+ V+ G K R +A LF EM + + + V+YNT
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L+ Y KVG E+A + M + + V+TYN LLGG G+ ++ ++V EM+
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
LP TYS L++G+ + G ++A E+ +
Sbjct: 510 VLPNLL-----------------------------TYSTLIDGYSKGGLYKEAMEIFREF 540
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
G+ + Y+ L++A C G V A+ ++M + G+ P+ VT+N++I+ F + +
Sbjct: 541 KSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATM 600
Query: 301 DQAERWVK----KMLEKGIAPTLETY-NSLINGYGRIS---------------NFVKC-F 339
D++ + ++ ET N +I +G+++ + C
Sbjct: 601 DRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCIL 660
Query: 340 EILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDM 380
E+ ++ + +KPNV+++ +++N + DA ++L ++
Sbjct: 661 EVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEEL 701
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 85/164 (51%), Gaps = 1/164 (0%)
Query: 218 SALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEE 277
SA+++ R G++ AK + G + +++ L++AY G E+AI M+E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 278 RGLKPSYVTFNTLINKFCETG-EVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFV 336
GL+P+ VT+N +I+ + G E Q ++ +M G+ P T+NSL+ R +
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 337 KCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDM 380
+ +E+ + ++ +V SY +L++ +CK ++ A +L M
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQM 400
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 165/357 (46%), Gaps = 34/357 (9%)
Query: 27 EKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD---LDKGFELMGCMEKERVGPSVFVY 83
EK + F M E RPDV +Y V VM+++ F + M K P+++ +
Sbjct: 144 EKAVESFGRMKEFDCRPDVFTYN--VILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTF 201
Query: 84 NLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKA 143
+++ GL K R DA+K+FD+M R + PN VTY LI G C+ G + A L M+
Sbjct: 202 GILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQT 261
Query: 144 PNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGS 203
P + +N LL G C GR+ +A E+L E +GF+ G
Sbjct: 262 SGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLG------------------- 302
Query: 204 LRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEG 263
R YS+L++G R R +A E+ A +++ + P I Y IL+ G
Sbjct: 303 ----------LRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAG 352
Query: 264 YVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYN 323
+E A++ M +G+ P +N +I C G +++ +M E P T+
Sbjct: 353 KIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHT 412
Query: 324 SLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDM 380
LI R + EI EIEK G P+V ++ +LI+ LCK +L +A ++L M
Sbjct: 413 ILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM 469
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 178/385 (46%), Gaps = 16/385 (4%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G+ P+ + L L + +F +M SG PD V++ ++ L
Sbjct: 224 MTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGR 283
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ + FEL+ EK+ + Y+ ++ GL + RR A +L+ ML +N+ P+ + Y
Sbjct: 284 MVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTI 343
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI G K G++E A L + M + P YN ++ LC G + + R + +EM
Sbjct: 344 LIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETE 403
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDER-------TYSALLNGFCRVGRIEKA 233
P + + S C NG + I++ T++AL++G C+ G +++A
Sbjct: 404 SFPDACTHTIL-ICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEA 462
Query: 234 KEVLAKLVENGVVPSQI-----SYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFN 288
+ +L K+ E G S S N + G + KA + + G P V++N
Sbjct: 463 RLLLHKM-EVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYN 521
Query: 289 TLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKK 348
LIN FC G++D A + + + KG++P TYN+LING R+ + F++ +
Sbjct: 522 VLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDF 581
Query: 349 GMKPNVISYGSLINCLCKDRKLLDA 373
P V Y SL+ C+ RK+L A
Sbjct: 582 RHSPAV--YRSLMTWSCRKRKVLVA 604
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 126/271 (46%), Gaps = 28/271 (10%)
Query: 114 NTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVL 173
++ + LI Y K+G EKA RMK + P V TYN +L RV EV
Sbjct: 126 DSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVIL-------RVMMREEVF 178
Query: 174 VEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKA 233
+ A + N L+ N + + T+ L++G + GR A
Sbjct: 179 FML-------------------AFAVYNEMLKCNCSPNL--YTFGILMDGLYKKGRTSDA 217
Query: 234 KEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINK 293
+++ + G+ P++++Y IL++ C G + A + +M+ G P V N L++
Sbjct: 218 QKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDG 277
Query: 294 FCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPN 353
FC+ G + +A ++ + G L Y+SLI+G R + + FE+ + KK +KP+
Sbjct: 278 FCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPD 337
Query: 354 VISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+I Y LI L K K+ DA +L M S+G
Sbjct: 338 IILYTILIQGLSKAGKIEDALKLLSSMPSKG 368
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 170/410 (41%), Gaps = 64/410 (15%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K + P + L + L + + E L + + M GI PD Y ++A
Sbjct: 329 MLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGL 388
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L++G L M + P + +++ +C+ V++A ++F E+ P+ T+N
Sbjct: 389 LEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNA 448
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LIDG CK GE+++A L +M+ P+ L L SG N + + +VE +G
Sbjct: 449 LIDGLCKSGELKEARLLLHKMEV--GRPA-----SLFLRLSHSG--NRSFDTMVE---SG 496
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
+ + + D+ S D +Y+ L+NGFCR G I+ A ++L L
Sbjct: 497 SILKAYRDLAHFADTGSSP-------------DIVSYNVLINGFCRAGDIDGALKLLNVL 543
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPS---------------YV 285
G+ P ++YN L+N G E+A + ++ P+ V
Sbjct: 544 QLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSCRKRKVLV 603
Query: 286 TFNTL-----------------INKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLING 328
FN I + + GE ++A R + ++ + TL Y + G
Sbjct: 604 AFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIG 663
Query: 329 Y---GRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEI 375
GR + F +L E + P+ + LI+ LCK R+ LDA I
Sbjct: 664 LCQSGRFHEALMVFSVLREKKILVTPPSCV---KLIHGLCK-REQLDAAI 709
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 146/376 (38%), Gaps = 77/376 (20%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G+ P N + + L G E+ ++ +M E+ PD ++ + +
Sbjct: 364 MPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGL 423
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKL------------------ 102
+ + E+ +EK PSV +N ++ GLCK +K+AR L
Sbjct: 424 VREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSH 483
Query: 103 -----FDEML--------HRNLV--------PNTVTYNTLIDGYCKVGEMEKAFSLKARM 141
FD M+ +R+L P+ V+YN LI+G+C+ G+++ A L +
Sbjct: 484 SGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVL 543
Query: 142 KAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIV----------- 190
+ P +TYN L+ GL GR +A ++ + P + ++
Sbjct: 544 QLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSCRKRKVLV 603
Query: 191 --------------FDDDSA-----CSNGNGSLRA-----NVAARIDERT---YSALLNG 223
DD++A C + RA + R DE T Y+ L G
Sbjct: 604 AFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIG 663
Query: 224 FCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPS 283
C+ GR +A V + L E ++ + S L++ C ++ AI+ + K
Sbjct: 664 LCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLM 723
Query: 284 YVTFNTLINKFCETGE 299
N L++ E+ E
Sbjct: 724 PRVCNYLLSSLLESTE 739
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
+ L +L GV + +L++AY G EKA+++ +M+E +P T+N ++
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVM 172
Query: 295 C-ETGEVDQAERWVKKMLEKGIAPTLETYNSLINGY---GRISNFVKCFEILEEIEKKGM 350
E A +ML+ +P L T+ L++G GR S+ K F +++ +G+
Sbjct: 173 MREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMF---DDMTGRGI 229
Query: 351 KPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
PN ++Y LI+ LC+ DA + +M + G
Sbjct: 230 SPNRVTYTILISGLCQRGSADDARKLFYEMQTSG 263
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 178/381 (46%), Gaps = 29/381 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+++GV ++++ + + V K + AVF DMV+ G++PDV+ Y + A + +
Sbjct: 510 MKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGN 569
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D+ + + M+K R P+ + ++ G K ++ + ++FD M VP T+N
Sbjct: 570 MDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNG 629
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI+G + +MEKA + M + TY ++ G S G A E ++ G
Sbjct: 630 LINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEG 689
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
+D TY ALL C+ GR++ A V ++
Sbjct: 690 L-----------------------------DVDIFTYEALLKACCKSGRMQSALAVTKEM 720
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+ + YNIL++ + G V +A +QM++ G+KP T+ + I+ + G++
Sbjct: 721 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDM 780
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
++A + +++M G+ P ++TY +LI G+ R S K EE++ G+KP+ Y L
Sbjct: 781 NRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCL 840
Query: 361 INCLCKDRKLLDAEIVLGDMA 381
+ L + +A I G M
Sbjct: 841 LTSLLSRASIAEAYIYSGVMT 861
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 167/358 (46%), Gaps = 29/358 (8%)
Query: 27 EKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLV 86
+K L VF + E G P VV+YG + + + K E+ M++E V ++ Y+++
Sbjct: 466 KKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMM 525
Query: 87 LGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNA 146
+ G K++ +A +F++M+ + P+ + YN +I +C +G M++A M+
Sbjct: 526 INGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRH 585
Query: 147 EPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRA 206
P+ T+ ++ G SG + + EV M G +P
Sbjct: 586 RPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVP----------------------- 622
Query: 207 NVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVE 266
T++ L+NG ++EKA E+L ++ GV ++ +Y ++ Y G
Sbjct: 623 ------TVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTG 676
Query: 267 KAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLI 326
KA + +++ GL T+ L+ C++G + A K+M + I YN LI
Sbjct: 677 KAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILI 736
Query: 327 NGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+G+ R + + +++++++K+G+KP++ +Y S I+ K + A + +M + G
Sbjct: 737 DGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALG 794
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 160/355 (45%), Gaps = 33/355 (9%)
Query: 32 VFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLC 91
F M GI P Y + A + +D+D+ + M++E + S+ Y++++GG
Sbjct: 331 TFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFS 390
Query: 92 KVRRVKDARKLFDEM--LHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPS 149
K + A FDE +H+ L N Y +I +C+ ME+A +L M+ +
Sbjct: 391 KAGHAEAADYWFDEAKRIHKTL--NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAP 448
Query: 150 VITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVA 209
+ Y+ ++ G V ++ GF P +V
Sbjct: 449 IAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPT----VV------------------- 485
Query: 210 ARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAI 269
TY L+N + +VG+I KA EV + E GV + +Y++++N + A
Sbjct: 486 ------TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAF 539
Query: 270 QTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGY 329
E M + G+KP + +N +I+ FC G +D+A + VK+M + PT T+ +I+GY
Sbjct: 540 AVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGY 599
Query: 330 GRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ + + E+ + + + G P V ++ LIN L + R++ A +L +M G
Sbjct: 600 AKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 186/423 (43%), Gaps = 74/423 (17%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAV---EAAVM 57
MR G+ P+ R L + ++ L+ M E GI +V+Y V A
Sbjct: 335 MRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGH 394
Query: 58 LKDLDKGFELMGCMEKERVGPSV--FVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNT 115
+ D F+ E +R+ ++ +Y ++ C+ ++ A L EM +
Sbjct: 395 AEAADYWFD-----EAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPI 449
Query: 116 VTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVE 175
Y+T++DGY V + +K + R+K P+V+TY CL+ G+++ A EV
Sbjct: 450 AIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEV--- 506
Query: 176 MEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKE 235
SR++ ++ ++ N+ +TYS ++NGF ++ A
Sbjct: 507 -----------SRVMKEE---------GVKHNL------KTYSMMINGFVKLKDWANAFA 540
Query: 236 VLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEE------------------ 277
V +V+ G+ P I YN +++A+C G +++AIQT ++M++
Sbjct: 541 VFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYA 600
Query: 278 ------RGLK-----------PSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLE 320
R L+ P+ TFN LIN E ++++A + +M G++
Sbjct: 601 KSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEH 660
Query: 321 TYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDM 380
TY ++ GY + + K FE ++ +G+ ++ +Y +L+ CK ++ A V +M
Sbjct: 661 TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM 720
Query: 381 ASR 383
++R
Sbjct: 721 SAR 723
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 181/381 (47%), Gaps = 29/381 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M++ GV P++ N + V + + EK L M GI P+VV+Y + L
Sbjct: 268 MQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHR 327
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRN-LVPNTVTYN 119
+++ EL+ M + P Y ++G LCK +R+ + R L +M + LVP+ VTYN
Sbjct: 328 VEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYN 387
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN 179
TLI K ++A + + Y+ ++ LC GR+++A++++ EM
Sbjct: 388 TLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSK 447
Query: 180 GFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAK 239
G P D TY+A++NGFCR+G ++KAK++L
Sbjct: 448 GHCPP----------------------------DVVTYTAVVNGFCRLGEVDKAKKLLQV 479
Query: 240 LVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGE 299
+ +G P+ +SY L+N C G +A + EE P+ +T++ +++ G+
Sbjct: 480 MHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGK 539
Query: 300 VDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGS 359
+ +A V++M+ KG P N L+ R + + +EE KG NV+++ +
Sbjct: 540 LSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTT 599
Query: 360 LINCLCKDRKLLDAEIVLGDM 380
+I+ C++ +L A VL DM
Sbjct: 600 VIHGFCQNDELDAALSVLDDM 620
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 165/334 (49%), Gaps = 31/334 (9%)
Query: 42 RPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARK 101
R D + Y +E K ++ M++ + + ++ V+ + +++DA K
Sbjct: 204 RHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALK 263
Query: 102 LFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLC 161
+ M + PN + NT ID + + +EKA RM+ P+V+TYNC++ G C
Sbjct: 264 VLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYC 323
Query: 162 SSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALL 221
RV +A E+L +M G LP D+ +Y ++
Sbjct: 324 DLHRVEEAIELLEDMHSKGCLP-----------------------------DKVSYYTIM 354
Query: 222 NGFCRVGRIEKAKEVLAKLV-ENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGL 280
C+ RI + ++++ K+ E+G+VP Q++YN L++ + ++A+ + +E+G
Sbjct: 355 GYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGF 414
Query: 281 KPSYVTFNTLINKFCETGEVDQAERWVKKMLEKG-IAPTLETYNSLINGYGRISNFVKCF 339
+ + ++ +++ C+ G + +A+ + +ML KG P + TY +++NG+ R+ K
Sbjct: 415 RIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAK 474
Query: 340 EILEEIEKKGMKPNVISYGSLINCLCKDRKLLDA 373
++L+ + G KPN +SY +L+N +C+ K L+A
Sbjct: 475 KLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEA 508
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 182/378 (48%), Gaps = 10/378 (2%)
Query: 16 LFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKER 75
+ E L +K + V M GI ++ + + + L +++ M++
Sbjct: 213 MLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAG 272
Query: 76 VGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAF 135
V P++ + N + + R++ A + + M +VPN VTYN +I GYC + +E+A
Sbjct: 273 VEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAI 332
Query: 136 SLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEM-EGNGFLPGGFS-----RI 189
L M + P ++Y ++G LC R+ + R+++ +M + +G +P + +
Sbjct: 333 ELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHM 392
Query: 190 VFDDDSACSNGNGSLR--ANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVP 247
+ D A L+ RID+ YSA+++ C+ GR+ +AK+++ +++ G P
Sbjct: 393 LTKHDHA-DEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCP 451
Query: 248 SQ-ISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERW 306
++Y +VN +C G V+KA + + M G KP+ V++ L+N C TG+ +A
Sbjct: 452 PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREM 511
Query: 307 VKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCK 366
+ E +P TY+ +++G R + +++ E+ KG P + L+ LC+
Sbjct: 512 MNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCR 571
Query: 367 DRKLLDAEIVLGDMASRG 384
D + +A + + ++G
Sbjct: 572 DGRTHEARKFMEECLNKG 589
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 184/426 (43%), Gaps = 46/426 (10%)
Query: 2 RKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDL 61
++ G++P + N L L ++ L D E G R D + Y V A +
Sbjct: 375 KEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRM 434
Query: 62 DKGFELMGCM-EKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ +L+ M K P V Y V+ G C++ V A+KL M PNTV+Y
Sbjct: 435 SEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTA 494
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L++G C+ G+ +A + + P+ ITY+ ++ GL G++++A +V+ EM G
Sbjct: 495 LLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKG 554
Query: 181 FLPGGFSRIVFDDDSACSNG---------------------------------NGSLRAN 207
F PG I S C +G N L A
Sbjct: 555 FFPGPVE-INLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAA 613
Query: 208 VAA---------RIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNA 258
++ D TY+ L++ + GRI +A E++ K++ G+ P+ ++Y +++
Sbjct: 614 LSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHR 673
Query: 259 YCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPT 318
YC G V+ + E+M R + +N +I K C G++++A+ + K+L
Sbjct: 674 YCQMGKVDDLVAILEKMISR--QKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSD 731
Query: 319 LETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLG 378
+T +L+ GY + + +++ + + + P+V L L K+ +A+ ++
Sbjct: 732 AKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLML 791
Query: 379 DMASRG 384
+ RG
Sbjct: 792 RLVERG 797
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 93/171 (54%)
Query: 211 RIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQ 270
R D Y ++L + + ++ VL + G+ + +++ ++ +Y G + A++
Sbjct: 204 RHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALK 263
Query: 271 TAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYG 330
M+ G++P+ + NT I+ F +++A R++++M GI P + TYN +I GY
Sbjct: 264 VLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYC 323
Query: 331 RISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMA 381
+ + E+LE++ KG P+ +SY +++ LCK++++++ ++ MA
Sbjct: 324 DLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMA 374
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 111/259 (42%), Gaps = 24/259 (9%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G P +N L ++L + + + + G +VV++ + +LD
Sbjct: 554 GFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAA 613
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
++ M VF Y ++ L K R+ +A +L +MLH+ + P VTY T+I
Sbjct: 614 LSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHR 673
Query: 125 YCKVGEMEKAFS----LKARMKAPNAEPSVITYNCLLGGLCSS----GRV------NDAR 170
YC++G+++ + + +R K VI C+LG L + G+V +DA+
Sbjct: 674 YCQMGKVDDLVAILEKMISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAK 733
Query: 171 EVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRI 230
MEG +L G + AC N +L +V + L G++
Sbjct: 734 TCYALMEG--YLKKGVPLSAYK--VACRMFNRNLIPDV------KMCEKLSKRLVLKGKV 783
Query: 231 EKAKEVLAKLVENGVVPSQ 249
++A +++ +LVE G + Q
Sbjct: 784 DEADKLMLRLVERGHISPQ 802
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 187/385 (48%), Gaps = 30/385 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G+ P+V N + K + ++F++M+E G+ P+ +Y ++ KD
Sbjct: 475 MEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKD 534
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVT-YN 119
++++ M + +YN ++ GLCKV + A+++ ++ + T YN
Sbjct: 535 EQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYN 594
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN 179
++IDG+ KVG+ + A M P+V+T+ L+ G C S R++ A E+ EM+
Sbjct: 595 SIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKS- 653
Query: 180 GFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAK 239
+ ++D Y AL++GFC+ ++ A + ++
Sbjct: 654 ----------------------------MELKLDLPAYGALIDGFCKKNDMKTAYTLFSE 685
Query: 240 LVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGE 299
L E G++P+ YN L++ + + G ++ AI ++M G+ T+ T+I+ + G
Sbjct: 686 LPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGN 745
Query: 300 VDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGS 359
++ A ++L+ GI P + L+NG + F+K ++LEE++KK + PNV+ Y +
Sbjct: 746 INLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYST 805
Query: 360 LINCLCKDRKLLDAEIVLGDMASRG 384
+I ++ L +A + +M +G
Sbjct: 806 VIAGHHREGNLNEAFRLHDEMLEKG 830
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 181/403 (44%), Gaps = 45/403 (11%)
Query: 3 KDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLD 62
K GV S + + V E+ + V +MV GI V++ V +L
Sbjct: 303 KLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELG 362
Query: 63 KGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLI 122
K +L ME+E + P ++++++ CK ++ A + + M + P++V +T+I
Sbjct: 363 KALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMI 422
Query: 123 DG----------------------------------YCKVGEMEKAFSLKARMKAPNAEP 148
G +CK G+++ A S M+ EP
Sbjct: 423 QGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEP 482
Query: 149 SVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVF--------DDDSACSNG 200
+V+ YN ++ C ++ AR + EM G P F+ + D+ +A
Sbjct: 483 NVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVI 542
Query: 201 NGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLV-ENGVVPSQISYNILVNAY 259
N +N A +E Y+ ++NG C+VG+ KAKE+L L+ E S SYN +++ +
Sbjct: 543 NQMNASNFEA--NEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGF 600
Query: 260 CHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTL 319
G + A++T +M E G P+ VTF +LIN FC++ +D A +M + L
Sbjct: 601 VKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDL 660
Query: 320 ETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLIN 362
Y +LI+G+ + ++ + + E+ + G+ PNV Y SLI+
Sbjct: 661 PAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLIS 703
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 175/388 (45%), Gaps = 46/388 (11%)
Query: 27 EKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELM------------------ 68
E+ + +F ++ G PD + + AV+AA DL +L+
Sbjct: 256 EEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTS 315
Query: 69 --------GCMEK------ERVG---P-SVFVYNLVLGGLCKVRRVKDARKLFDEMLHRN 110
G ME+ E VG P SV ++ G CK + A LF+ M
Sbjct: 316 VIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEG 375
Query: 111 LVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAR 170
L P+ V ++ +++ +CK EMEKA RMK+ PS + + ++ G + A
Sbjct: 376 LAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAAL 435
Query: 171 EVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDER-------TYSALLNG 223
E+ + + G +F C G + ++++ Y+ ++
Sbjct: 436 EIFNDSFESWIAHGFMCNKIF--LLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLA 493
Query: 224 FCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPS 283
CR+ ++ A+ + ++++E G+ P+ +Y+IL++ + + A QM + +
Sbjct: 494 HCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEAN 553
Query: 284 YVTFNTLINKFCETGEVDQAERWVKKML-EKGIAPTLETYNSLINGYGRISNFVKCFEIL 342
V +NT+IN C+ G+ +A+ ++ ++ EK + + +YNS+I+G+ ++ + E
Sbjct: 554 EVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETY 613
Query: 343 EEIEKKGMKPNVISYGSLINCLCKDRKL 370
E+ + G PNV+++ SLIN CK ++
Sbjct: 614 REMSENGKSPNVVTFTSLINGFCKSNRM 641
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 173/378 (45%), Gaps = 47/378 (12%)
Query: 47 SYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEM 106
++ + A + K +D + G M +V P V N VL L + + +A++++++M
Sbjct: 171 AFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKM 230
Query: 107 LHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRV 166
+ + + VT L+ + + E+A + R+ + AEP + ++ + C + +
Sbjct: 231 VLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDL 290
Query: 167 NDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDER----------T 216
A ++L EM G +P S+ + G++ V +DE
Sbjct: 291 VMALDLLREMRGKLGVPA--SQETYTSVIVAFVKEGNMEEAVRV-MDEMVGFGIPMSVIA 347
Query: 217 YSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQME 276
++L+NG+C+ + KA ++ ++ E G+ P ++ ++++V +C +EKAI+ +M+
Sbjct: 348 ATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMK 407
Query: 277 ERGLKPSYVTFNTLI------------------------------NK----FCETGEVDQ 302
+ PS V +T+I NK FC+ G+VD
Sbjct: 408 SVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDA 467
Query: 303 AERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLIN 362
A ++K M +KGI P + YN+++ + R+ N I E+ +KG++PN +Y LI+
Sbjct: 468 ATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILID 527
Query: 363 CLCKDRKLLDAEIVLGDM 380
K++ +A V+ M
Sbjct: 528 GFFKNKDEQNAWDVINQM 545
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 9 SVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELM 68
S S N + + V + + + +M E+G P+VV++ + +D E+
Sbjct: 589 SCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMT 648
Query: 69 GCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKV 128
M+ + + Y ++ G CK +K A LF E+ L+PN YN+LI G+ +
Sbjct: 649 HEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNL 708
Query: 129 GEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSR 188
G+M+ A L +M + TY ++ GL G +N A ++ E+ G +P
Sbjct: 709 GKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVP----- 763
Query: 189 IVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPS 248
DE + L+NG + G+ KA ++L ++ + V P+
Sbjct: 764 ------------------------DEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPN 799
Query: 249 QISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLIN 292
+ Y+ ++ + EG + +A + ++M E+G+ FN L++
Sbjct: 800 VLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVS 843
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 180/385 (46%), Gaps = 30/385 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G +P + + L + + + F M++ G +P+++++ ++
Sbjct: 243 MIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGS 302
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLV-PNTVTYN 119
+ + FE++ M + P+V+ + ++ GLCK + A +LF +++ + PN TY
Sbjct: 303 IKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYT 362
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN 179
++I GYCK ++ +A L +RMK P+V TY L+ G C +G A E++ M
Sbjct: 363 SMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDE 422
Query: 180 GFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAK 239
GF+P + TY+A ++ C+ R +A E+L K
Sbjct: 423 GFMPNIY-----------------------------TYNAAIDSLCKKSRAPEAYELLNK 453
Query: 240 LVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGE 299
G+ ++Y IL+ C + + +A+ +M + G + N LI FC +
Sbjct: 454 AFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKK 513
Query: 300 VDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGS 359
+ ++ER + ++ G+ PT ETY S+I+ Y + + + +++ G P+ +YGS
Sbjct: 514 MKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGS 573
Query: 360 LINCLCKDRKLLDAEIVLGDMASRG 384
LI+ LCK + +A + M RG
Sbjct: 574 LISGLCKKSMVDEACKLYEAMIDRG 598
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 182/373 (48%), Gaps = 10/373 (2%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G P++ + L + L ++ + +MV +G +P+V ++ ++ +K
Sbjct: 282 GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKA 341
Query: 65 FEL-MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLID 123
F L + + + P+V Y ++GG CK ++ A LF M + L PN TY TLI+
Sbjct: 342 FRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 401
Query: 124 GYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP 183
G+CK G +A+ L M P++ TYN + LC R +A E+L + G
Sbjct: 402 GHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEA 461
Query: 184 GGFSRIVFDDDSACSNG-NGSL----RAN-VAARIDERTYSALLNGFCRVGRIEKAKEVL 237
G + + + N N +L R N D R + L+ FCR ++++++ +
Sbjct: 462 DGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLF 521
Query: 238 AKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCET 297
+V G++P++ +Y +++ YC EG ++ A++ M+ G P T+ +LI+ C+
Sbjct: 522 QLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKK 581
Query: 298 GEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISY 357
VD+A + + M+++G++P T +L Y + ++ +LE ++KK + +
Sbjct: 582 SMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLW---IRTV 638
Query: 358 GSLINCLCKDRKL 370
+L+ LC ++K+
Sbjct: 639 RTLVRKLCSEKKV 651
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 162/361 (44%), Gaps = 30/361 (8%)
Query: 25 QFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYN 84
+ + + + DM G+ P ++ +E AV L ++ + M V P Y
Sbjct: 162 RLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYK 221
Query: 85 LVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAP 144
L++ G + ++++A + M+ R +P+ T ++ C+ G + +A +M
Sbjct: 222 LMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDL 281
Query: 145 NAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSL 204
+P++I + L+ GLC G + A E+L EM NG+ P +
Sbjct: 282 GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVY------------------ 323
Query: 205 RANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVV-PSQISYNILVNAYCHEG 263
T++AL++G C+ G EKA + KLV + P+ +Y ++ YC E
Sbjct: 324 -----------THTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKED 372
Query: 264 YVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYN 323
+ +A +M+E+GL P+ T+ TLIN C+ G +A + M ++G P + TYN
Sbjct: 373 KLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYN 432
Query: 324 SLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
+ I+ + S + +E+L + G++ + ++Y LI CK + A M
Sbjct: 433 AAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKT 492
Query: 384 G 384
G
Sbjct: 493 G 493
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 168/333 (50%), Gaps = 24/333 (7%)
Query: 60 DLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYN 119
+L K E+M CM L ++ R+ +A + +M ++ L P+++T N
Sbjct: 142 NLQKAHEVMRCM---------------LRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMN 186
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN 179
+++ ++G +E A ++ M P +Y ++ G G++ +A L M
Sbjct: 187 CVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQR 246
Query: 180 GFLPGGFSRIVFDDDSACSNG--NGSLR-----ANVAARIDERTYSALLNGFCRVGRIEK 232
GF+P + + C NG N ++ ++ + + +++L++G C+ G I++
Sbjct: 247 GFIPDN-ATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQ 305
Query: 233 AKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQM-EERGLKPSYVTFNTLI 291
A E+L ++V NG P+ ++ L++ C G+ EKA + ++ KP+ T+ ++I
Sbjct: 306 AFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMI 365
Query: 292 NKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMK 351
+C+ ++++AE +M E+G+ P + TY +LING+ + +F + +E++ + +G
Sbjct: 366 GGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFM 425
Query: 352 PNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
PN+ +Y + I+ LCK + +A +L S G
Sbjct: 426 PNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCG 458
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 128/303 (42%), Gaps = 29/303 (9%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
+R D P+V + + + + +F+ M E G+ P+V +Y +
Sbjct: 349 VRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGS 408
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ +ELM M E P+++ YN + LCK R +A +L ++ L + VTY
Sbjct: 409 FGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTI 468
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI CK ++ +A + RM E + N L+ C ++ ++ + + G
Sbjct: 469 LIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLG 528
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
+P + TY+++++ +C+ G I+ A + +
Sbjct: 529 LIP-----------------------------TKETYTSMISCYCKEGDIDLALKYFHNM 559
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+G VP +Y L++ C + V++A + E M +RGL P VT TL ++C+ +
Sbjct: 560 KRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDS 619
Query: 301 DQA 303
A
Sbjct: 620 ANA 622
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 111/266 (41%), Gaps = 3/266 (1%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M +G +P++ + N ++L + + + G+ D V+Y ++ D
Sbjct: 419 MGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQND 478
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+++ M K + + N+++ C+ +++K++ +LF ++ L+P TY +
Sbjct: 479 INQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTS 538
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+I YCK G+++ A MK P TY L+ GLC V++A ++ M G
Sbjct: 539 MISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRG 598
Query: 181 FLPGGFSRIVFDDDSACSNGNGS---LRANVAARIDERTYSALLNGFCRVGRIEKAKEVL 237
P +R+ + N + + L + ++ RT L+ C ++ A
Sbjct: 599 LSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFF 658
Query: 238 AKLVENGVVPSQISYNILVNAYCHEG 263
KL+E +++ A G
Sbjct: 659 QKLLEKDSSADRVTLAAFTTACSESG 684
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 35/199 (17%)
Query: 203 SLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHE 262
SL AN + +L F +GR+ +A ++ + G+ PS I+ N ++
Sbjct: 136 SLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVEL 195
Query: 263 GYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWV--------------- 307
G +E A ++M RG+ P ++ ++ G++ +A+RW+
Sbjct: 196 GLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATC 255
Query: 308 --------------------KKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEK 347
+KM++ G P L + SLI+G + + + FE+LEE+ +
Sbjct: 256 TLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVR 315
Query: 348 KGMKPNVISYGSLINCLCK 366
G KPNV ++ +LI+ LCK
Sbjct: 316 NGWKPNVYTHTALIDGLCK 334
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 208/423 (49%), Gaps = 44/423 (10%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQF--EKVLAVFTDMVESGIRPDVVSY---------- 48
+R ++ + +N + T++ S + + + DMV SG PDVV++
Sbjct: 213 VRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKG 272
Query: 49 GKAVEAAVMLKDLDK-------------------------GFELMGCMEKERVGPSVFVY 83
GK +E ++L+++++ L M + + VY
Sbjct: 273 GKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVY 332
Query: 84 NLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKA 143
+++ GL K +++A K F +L N VPN VTY L+DG CK G++ A + +M
Sbjct: 333 TVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLE 392
Query: 144 PNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSR-IVFDDDSACSNGNG 202
+ P+V+TY+ ++ G G + +A +L +ME +P GF+ V D
Sbjct: 393 KSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEM 452
Query: 203 SLRANVAAR---IDERTY--SALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVN 257
++ + R ++E Y AL+N R+GRI++ K ++ +V GV QI+Y L++
Sbjct: 453 AIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLID 512
Query: 258 AYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAP 317
+ G E A+ AE+M+ERG+ V++N LI+ + G+V A+ K M EKGI P
Sbjct: 513 VFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEP 571
Query: 318 TLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVL 377
+ T+N ++N + + ++ ++++ G+KP+++S ++ LC++ K+ +A +L
Sbjct: 572 DIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHIL 631
Query: 378 GDM 380
M
Sbjct: 632 NQM 634
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 187/390 (47%), Gaps = 7/390 (1%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
MR GV + ++ L L + ++V + DMV G+ D ++Y ++ D
Sbjct: 460 MRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGD 519
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ M++ + V YN+++ G+ K +V A + M + + P+ T+N
Sbjct: 520 EEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNI 578
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+++ K G+ E L +MK+ +PS+++ N ++G LC +G++ +A +L +M
Sbjct: 579 MMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLME 638
Query: 181 FLPGGFS-RIVFDDDSACSNGNGSLRAN-----VAARIDERTYSALLNGFCRVGRIEKAK 234
P + RI D S + + + ++ + Y+ L+ C++G +KA
Sbjct: 639 IHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAA 698
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
V+ + G +P +++N L++ Y +V KA+ T M E G+ P+ T+NT+I
Sbjct: 699 MVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGL 758
Query: 295 CETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNV 354
+ G + + ++W+ +M +G+ P TYN+LI+G +I N I E+ G+ P
Sbjct: 759 SDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKT 818
Query: 355 ISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+Y LI+ K+L A +L +M RG
Sbjct: 819 STYNVLISEFANVGKMLQARELLKEMGKRG 848
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 195/415 (46%), Gaps = 38/415 (9%)
Query: 5 GVLPSVRSVNRLFETL-VGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDK 63
GV+P R N L V ++V +++ M+ G+ PDV + + + + L
Sbjct: 88 GVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSF 147
Query: 64 GFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLID 123
L+ + YN V+ GLC+ +A + EM+ ++P+TV+YNTLID
Sbjct: 148 AISLL---RNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLID 204
Query: 124 GYCKVGEMEKA----------------------FSLKA------RMKAPNAEPSVITYNC 155
G+CKVG +A ++L A M +P V+T++
Sbjct: 205 GFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSS 264
Query: 156 LLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSN---GNGSLRANVAAR- 211
++ LC G+V + +L EME P + D +N +L + + R
Sbjct: 265 IINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRG 324
Query: 212 --IDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAI 269
+D Y+ L++G + G + +A++ L+E+ VP+ ++Y LV+ C G + A
Sbjct: 325 IPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAE 384
Query: 270 QTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGY 329
QM E+ + P+ VT++++IN + + G +++A ++KM ++ + P TY ++I+G
Sbjct: 385 FIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGL 444
Query: 330 GRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ E+ +E+ G++ N +L+N L + ++ + + ++ DM S+G
Sbjct: 445 FKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKG 499
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 157/332 (47%), Gaps = 19/332 (5%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+ G+ PS+ S N + L + + E+ + + M+ I P++ +Y ++ + K
Sbjct: 599 MKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKR 658
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
D F+ + + S VYN ++ LCK+ K A + +M R +P+TVT+N+
Sbjct: 659 ADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNS 718
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L+ GY + KA S + M P+V TYN ++ GL +G + + + L EM+ G
Sbjct: 719 LMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRG 778
Query: 181 FLPGGFS-RIVFDDDSACSNGNGSLRANVAARID-----ERTYSALLNGFCRVGRIEKAK 234
P F+ + + N GS+ D TY+ L++ F VG++ +A+
Sbjct: 779 MRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQAR 838
Query: 235 EVLAKLVENGVVPSQISYNILVNAYC----HEG--YVEKAIQTAE-------QMEERGLK 281
E+L ++ + GV P+ +Y +++ C H + +KA+ AE +EE+G
Sbjct: 839 ELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYI 898
Query: 282 PSYVTFNTLINKFCETGEVDQAERWVKKMLEK 313
P T + F + G AER++K+ +K
Sbjct: 899 PCNQTIYWISAAFSKPGMKVDAERFLKECYKK 930
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 189/392 (48%), Gaps = 21/392 (5%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
GVLP V + N L + ++ AV M E+GI PDV +Y + A L++
Sbjct: 43 GVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRV 102
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLH-RNLVPNTVTYNTLID 123
+L M + P ++ YN ++ K+ R +A K+ E +H LVP TYN L+D
Sbjct: 103 LQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLD 162
Query: 124 GYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP 183
CK G + A L +K+ +P ++TYN L+ GLC S RV ++ E++ +G+ P
Sbjct: 163 ALCKSGHTDNAIELFKHLKS-RVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTP 221
Query: 184 GGFS-----RIVFDDDSACSNGNGSLRANVAARIDERTYS-----ALLNGFCRVGRIEKA 233
+ ++ F L+ + + + T+ A+++ + GR E+A
Sbjct: 222 NAVTYTTMLKMYFKTKRI----EKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEA 277
Query: 234 KEVLAKLVENGVVPSQI-SYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLIN 292
E + +LV +G I SYN L+N Y +G ++ E++E +GLKP T ++N
Sbjct: 278 YECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVN 337
Query: 293 KFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKP 352
G AE+ + + E G+ P++ T N LI+G + + + + +E +
Sbjct: 338 GLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR---- 393
Query: 353 NVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ +Y S+++ LCKD +L+ A +L ++G
Sbjct: 394 DEFTYTSVVHNLCKDGRLVCASKLLLSCYNKG 425
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 169/358 (47%), Gaps = 32/358 (8%)
Query: 9 SVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELM 68
S + +N +L + E+ + D + G+ PDV++Y ++ +D+ + +
Sbjct: 12 STKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVT 71
Query: 69 GCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKV 128
M + + P V YN ++ G K + +LFDEMLH L P+ +YNTL+ Y K+
Sbjct: 72 RRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKL 131
Query: 129 GEMEKAFS-LKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
G +AF L + P + TYN LL LC SG ++A E+ ++ S
Sbjct: 132 GRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLK---------S 182
Query: 188 RIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVP 247
R+ + + TY+ L+NG C+ R+ ++ +L ++G P
Sbjct: 183 RV---------------------KPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTP 221
Query: 248 SQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWV 307
+ ++Y ++ Y +EK +Q +M++ G +++ +TG ++A +
Sbjct: 222 NAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECM 281
Query: 308 KKMLEKGI-APTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
+++ G + + +YN+L+N Y + N ++LEEIE KG+KP+ ++ ++N L
Sbjct: 282 HELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGL 339
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 147/291 (50%), Gaps = 31/291 (10%)
Query: 77 GPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFS 136
G S + N+ + LCK R ++ A L + + ++P+ +TYNTLI GY + +++A++
Sbjct: 10 GISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYA 69
Query: 137 LKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSA 196
+ RM+ EP V TYN L+ G + +N ++ EM +G P
Sbjct: 70 VTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSP------------- 116
Query: 197 CSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVE-NGVVPSQISYNIL 255
D +Y+ L++ + ++GR +A ++L + + G+VP +YNIL
Sbjct: 117 ----------------DMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNIL 160
Query: 256 VNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGI 315
++A C G+ + AI+ + ++ R +KP +T+N LIN C++ V + ++++ + G
Sbjct: 161 LDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGY 219
Query: 316 APTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCK 366
P TY +++ Y + K ++ +++K+G + + ++++ L K
Sbjct: 220 TPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIK 270
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 160/387 (41%), Gaps = 69/387 (17%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSY----------GK 50
MR+ G+ P V + N L + +VL +F +M+ SG+ PD+ SY G+
Sbjct: 74 MREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGR 133
Query: 51 AVEAAVMLKD--------------------------LDKGFELMGCMEKERVGPSVFVYN 84
EA +L + D EL + K RV P + YN
Sbjct: 134 HGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPELMTYN 192
Query: 85 LVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAP 144
+++ GLCK RRV + E+ PN VTY T++ Y K +EK L +MK
Sbjct: 193 ILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKE 252
Query: 145 NAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSL 204
++ L +GR +A E + E+ +
Sbjct: 253 GYTFDGFANCAVVSALIKTGRAEEAYECMHEL---------------------------V 285
Query: 205 RANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGY 264
R+ ++ D +Y+ LLN + + G ++ ++L ++ G+ P ++ I+VN + G
Sbjct: 286 RSGTRSQ-DIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGN 344
Query: 265 VEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNS 324
A + + E G++PS VT N LI+ C+ G VD+A R M + TY S
Sbjct: 345 TGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVRDEF----TYTS 400
Query: 325 LINGYGRISNFVKCFEILEEIEKKGMK 351
+++ + V ++L KGMK
Sbjct: 401 VVHNLCKDGRLVCASKLLLSCYNKGMK 427
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 90/164 (54%), Gaps = 1/164 (0%)
Query: 221 LNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGL 280
+N C+ +E+A+ +L + GV+P I+YN L+ Y +++A +M E G+
Sbjct: 20 VNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGI 79
Query: 281 KPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFE 340
+P T+N+LI+ + +++ + +ML G++P + +YN+L++ Y ++ + F+
Sbjct: 80 EPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFK 139
Query: 341 IL-EEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
IL E+I G+ P + +Y L++ LCK +A + + SR
Sbjct: 140 ILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR 183
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%)
Query: 287 FNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIE 346
N +N C+ +++AE + + G+ P + TYN+LI GY R + + + +
Sbjct: 16 LNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMR 75
Query: 347 KKGMKPNVISYGSLINCLCKDRKL 370
+ G++P+V +Y SLI+ K+ L
Sbjct: 76 EAGIEPDVTTYNSLISGAAKNLML 99
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 174/381 (45%), Gaps = 50/381 (13%)
Query: 3 KDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLD 62
K G++P+ S L + SK+++ + M E G +PD+V+YG + V+ +D
Sbjct: 373 KKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMD 432
Query: 63 KGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLI 122
+ + V P +YN+++ GLCK R A+ LF EML RN++P+ Y TLI
Sbjct: 433 DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLI 492
Query: 123 DGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFL 182
DG+ + G+ ++A + + + V+ +N ++ G C SG +++A + M +
Sbjct: 493 DGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLV 552
Query: 183 PGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVE 242
P F TYS +++G+ + + A ++ + +
Sbjct: 553 PDKF-----------------------------TYSTIIDGYVKQQDMATAIKIFRYMEK 583
Query: 243 NGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFC-ETGEVD 301
N P+ ++Y L+N +C +G + A +T ++M+ R L P+ VT+ TLI E+ ++
Sbjct: 584 NKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLE 643
Query: 302 QAERWVKKMLEKGIAPTLETYNSLINGY-----------------GRISNFVKCFEILEE 344
+A + + M+ P T+N L+ G+ G+ S F E
Sbjct: 644 KAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFS---EFFHR 700
Query: 345 IEKKGMKPNVISYGSLINCLC 365
++ G + +Y S + CLC
Sbjct: 701 MKSDGWSDHAAAYNSALVCLC 721
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 171/383 (44%), Gaps = 29/383 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
++ G +P++ + + F + +++ E G+R V ++A
Sbjct: 266 LKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGY 325
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
E +G + P V YN+++ LCK + + A DE + L+PN ++Y
Sbjct: 326 KVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAP 385
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI YCK E + A L +M +P ++TY L+ GL SG ++DA + V++ G
Sbjct: 386 LIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 445
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P D Y+ L++G C+ GR AK + +++
Sbjct: 446 VSP-----------------------------DAAIYNMLMSGLCKTGRFLPAKLLFSEM 476
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
++ ++P Y L++ + G ++A + E+G+K V N +I FC +G +
Sbjct: 477 LDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGML 536
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
D+A + +M E+ + P TY+++I+GY + + +I +EK KPNV++Y SL
Sbjct: 537 DEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSL 596
Query: 361 INCLCKDRKLLDAEIVLGDMASR 383
IN C AE +M R
Sbjct: 597 INGFCCQGDFKMAEETFKEMQLR 619
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 152/329 (46%), Gaps = 47/329 (14%)
Query: 78 PSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRN--------------------------- 110
P V N +L L K RR+ DARK++DEM R
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 111 --------LVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCS 162
+PN V YNT+I GYCK+G++E A+ + +K P++ T+ ++ G C
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 163 SGRVNDAREVLVEMEGNGF-LPGGFSRIVFDD--------DSACSNGNGSLRANVAARID 213
G + +L E++ G + F + D D A S G + AN + D
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIG--WIIAN-DCKPD 344
Query: 214 ERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAE 273
TY+ L+N C+ G+ E A L + + G++P+ +SY L+ AYC + A +
Sbjct: 345 VATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLL 404
Query: 274 QMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRIS 333
QM ERG KP VT+ LI+ +G +D A K++++G++P YN L++G +
Sbjct: 405 QMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTG 464
Query: 334 NFVKCFEILEEIEKKGMKPNVISYGSLIN 362
F+ + E+ + + P+ Y +LI+
Sbjct: 465 RFLPAKLLFSEMLDRNILPDAYVYATLID 493
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 131/319 (41%), Gaps = 21/319 (6%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
GV P N L L + +F +F++M++ I PD Y ++ + D D+
Sbjct: 445 GVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEA 504
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
++ ++ V V +N ++ G C+ + +A + M +LVP+ TY+T+IDG
Sbjct: 505 RKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDG 564
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
Y K +M A + M+ +P+V+TY L+ G C G A E EM+ +P
Sbjct: 565 YVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPN 624
Query: 185 GFSRIVFDDDSACSNGN-------GSLRANVAARIDERTYSALLNGFCR----------- 226
+ A + L +E T++ LL GF +
Sbjct: 625 VVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPD 684
Query: 227 ---VGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPS 283
G+ E ++ +G +YN + C G V+ A ++M ++G P
Sbjct: 685 GSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPD 744
Query: 284 YVTFNTLINKFCETGEVDQ 302
V+F +++ FC G Q
Sbjct: 745 PVSFAAILHGFCVVGNSKQ 763
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 194/386 (50%), Gaps = 25/386 (6%)
Query: 2 RKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESG---IRPDV-VSYGKAVEAAVM 57
++ G S + L +QF V + +M ++ I P++ V + +A M
Sbjct: 123 KQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANM 182
Query: 58 LKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVT 117
+K K E++ M K + P +V+ +L LCK VK+A K+F++M + PN
Sbjct: 183 VK---KAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRY 238
Query: 118 YNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEME 177
+ +L+ G+C+ G++ +A + +MK EP ++ + LL G +G++ DA +++ +M
Sbjct: 239 FTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMR 298
Query: 178 GNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARI-----------DERTYSALLNGFCR 226
GF P V + C R + A R+ D TY+AL++GFC+
Sbjct: 299 KRGFEPNVNCYTVLIQ-ALCRTEK---RMDEAMRVFVEMERYGCEADIVTYTALISGFCK 354
Query: 227 VGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVT 286
G I+K VL + + GV+PSQ++Y ++ A+ + E+ ++ E+M+ RG P +
Sbjct: 355 WGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLI 414
Query: 287 FNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIE 346
+N +I C+ GEV +A R +M G++P ++T+ +ING+ ++ +E+
Sbjct: 415 YNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMV 474
Query: 347 KKGM--KPNVISYGSLINCLCKDRKL 370
+G+ P + SL+N L +D KL
Sbjct: 475 SRGIFSAPQYGTLKSLLNNLVRDDKL 500
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 154/314 (49%), Gaps = 37/314 (11%)
Query: 74 ERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEK 133
E + P +FV +++ VK A ++ DEM L P+ + L+D CK G +++
Sbjct: 163 ELIEPELFV--VLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKE 220
Query: 134 AFSL--KARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVF 191
A + R K P P++ + LL G C G++ +A+EVLV+M+ G P
Sbjct: 221 ASKVFEDMREKFP---PNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEP-------- 269
Query: 192 DDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQIS 251
D ++ LL+G+ G++ A +++ + + G P+
Sbjct: 270 ---------------------DIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNC 308
Query: 252 YNILVNAYCH-EGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKM 310
Y +L+ A C E +++A++ +ME G + VT+ LI+ FC+ G +D+ + M
Sbjct: 309 YTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDM 368
Query: 311 LEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKL 370
+KG+ P+ TY ++ + + F +C E++E+++++G P+++ Y +I CK ++
Sbjct: 369 RKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEV 428
Query: 371 LDAEIVLGDMASRG 384
+A + +M + G
Sbjct: 429 KEAVRLWNEMEANG 442
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 154/380 (40%), Gaps = 69/380 (18%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P++R L + + V M E+G+ PD+V + + + ++L
Sbjct: 234 PNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDL 293
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKV-RRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYC 126
M M K P+V Y +++ LC+ +R+ +A ++F EM + VTY LI G+C
Sbjct: 294 MNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFC 353
Query: 127 KVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGF 186
K G ++K +S+ M+ PS +TY ++ + + E++ +M+ G P
Sbjct: 354 KWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHP--- 410
Query: 187 SRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVV 246
D Y+ ++ C++G +++A + ++ NG+
Sbjct: 411 --------------------------DLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLS 444
Query: 247 PSQISYNILVNAYCHEGYVEKAIQTAEQMEERGL--KPSYVTFNTLINKF---------- 294
P ++ I++N + +G++ +A ++M RG+ P Y T +L+N
Sbjct: 445 PGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAK 504
Query: 295 ------------CE---------------TGEVDQAERWVKKMLEKGIAPTLETYNSLIN 327
CE G V +A + M+E + P TY L+
Sbjct: 505 DVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMK 564
Query: 328 GYGRISNFVKCFEILEEIEK 347
G ++ N EI E++ K
Sbjct: 565 GLNKLYNRTIAAEITEKVVK 584
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 132/304 (43%), Gaps = 15/304 (4%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVML-K 59
M++ G+ P + L + + + DM + G P+V Y ++A K
Sbjct: 262 MKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEK 321
Query: 60 DLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYN 119
+D+ + ME+ + Y ++ G CK + + D+M + ++P+ VTY
Sbjct: 322 RMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYM 381
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN 179
++ + K + E+ L +MK P ++ YN ++ C G V +A + EME N
Sbjct: 382 QIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEAN 441
Query: 180 GFLPG---------GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRI 230
G PG GF+ F + AC++ + + + T +LLN R ++
Sbjct: 442 GLSPGVDTFVIMINGFTSQGFLIE-ACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKL 500
Query: 231 EKAKEVLAKLVENGVVPSQI---SYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTF 287
E AK+V + + N ++ ++ I ++A +G+V++A M E L P T+
Sbjct: 501 EMAKDVWS-CISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTY 559
Query: 288 NTLI 291
L+
Sbjct: 560 AKLM 563
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 199/390 (51%), Gaps = 20/390 (5%)
Query: 9 SVRSVNRLFETLVGSKQFEKVLAVFTDMVESG---IRPDV-VSYGKAVEAAVMLKDLDKG 64
S+ + + L +QF V + +M + I P++ V + +A M+K K
Sbjct: 146 SIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVK---KA 202
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
E++ M K P +V+ +L LCK VKDA KLF++M R V N + +L+ G
Sbjct: 203 IEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPV-NLRYFTSLLYG 261
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
+C+VG+M +A + +M EP ++ Y LL G ++G++ DA ++L +M GF P
Sbjct: 262 WCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPN 321
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARI-------DERTYSALLNGFCRVGRIEKAKEVL 237
V + C V + D TY+AL++GFC+ G+I+K VL
Sbjct: 322 ANCYTVLIQ-ALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVL 380
Query: 238 AKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCET 297
+++ G++PS+++Y ++ A+ + E+ ++ E+M + P +N +I C+
Sbjct: 381 DDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKL 440
Query: 298 GEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISY 357
GEV +A R +M E G++P ++T+ +ING ++ + +E+ +G+ +V Y
Sbjct: 441 GEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGL-FSVSQY 499
Query: 358 GS---LINCLCKDRKLLDAEIVLGDMASRG 384
G+ L+N + KD+KL A+ V + S+G
Sbjct: 500 GTLKLLLNTVLKDKKLEMAKDVWSCITSKG 529
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 121/304 (39%), Gaps = 44/304 (14%)
Query: 32 VFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLC 91
V M E+G PD+V Y + + ++L+ M + P+ Y +++ LC
Sbjct: 274 VLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALC 333
Query: 92 KVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAF---------------- 135
KV R+++A K+F EM + VTY L+ G+CK G+++K +
Sbjct: 334 KVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSEL 393
Query: 136 -------------------SLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEM 176
L +M+ P + YN ++ C G V +A + EM
Sbjct: 394 TYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEM 453
Query: 177 EGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSA--------LLNGFCRVG 228
E NG PG + ++ + A + + +S LLN +
Sbjct: 454 EENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDK 513
Query: 229 RIEKAKEVLAKLVENGVVPSQI-SYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTF 287
++E AK+V + + G + S+ I ++A +GY ++A +M E P TF
Sbjct: 514 KLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTF 573
Query: 288 NTLI 291
L+
Sbjct: 574 AKLM 577
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 186/413 (45%), Gaps = 47/413 (11%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G+ P + + + L + + +F+ + G++ DVV + ++ V D
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L + M + + P+V Y +++ GLC+ R+ +A ++ ++L R + P+ VTY++
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LIDG+CK G + F+L M P V+ Y L+ GL G + A V+M G
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491
Query: 181 F---------LPGGFSRI-VFDDDSACSNGNG--SLRANVAARIDERTYSALLNGFCR-- 226
L G+ R+ FD+ G ++ +VA S + + FC+
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHM 551
Query: 227 ---VG------------------------------RIEKAKEVLAKLVENGVVPSQISYN 253
+G RIE A + L+E + P ++YN
Sbjct: 552 KPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYN 611
Query: 254 ILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK 313
++ YC +++A + E ++ P+ VT LI+ C+ ++D A R M EK
Sbjct: 612 TMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK 671
Query: 314 GIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCK 366
G P TY L++ + + + F++ EE+++KG+ P+++SY +I+ LCK
Sbjct: 672 GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 724
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 186/381 (48%), Gaps = 20/381 (5%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVS-YGKAVEAAVMLKDLDK 63
GV+ SV R+ +L+GS + + + F + GI P VS +G ++A ++ K
Sbjct: 176 GVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTK 235
Query: 64 GFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLID 123
+ + + + N VL GL V +++ A +L +L PN VT+ TLI+
Sbjct: 236 ALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLIN 294
Query: 124 GYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP 183
G+CK GEM++AF L M+ EP +I Y+ L+ G +G + ++ + G
Sbjct: 295 GFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGV-- 352
Query: 184 GGFSRIVFDD--DSACSNGNGSLRANVAARI-------DERTYSALLNGFCRVGRIEKAK 234
+VF D +G+ + + V R+ + TY+ L+ G C+ GRI +A
Sbjct: 353 -KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
+ ++++ G+ PS ++Y+ L++ +C G + E M + G P V + L++
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471
Query: 295 CETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNV 354
+ G + A R+ KML + I + +NSLI+G+ R++ F + ++ + G+KP+V
Sbjct: 472 SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDV 531
Query: 355 ISYGSLI------NCLCKDRK 369
++ +++ + CK K
Sbjct: 532 ATFTTVMRVSIMEDAFCKHMK 552
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 195/430 (45%), Gaps = 53/430 (12%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
GV V + + V S V+ M+ GI P+VV+Y ++ + +
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
F + G + K + PS+ Y+ ++ G CK ++ L+++M+ P+ V Y L+DG
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP- 183
K G M A +M + +V+ +N L+ G C R ++A +V M G P
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 184 -GGFS---RIVFDDDSACSNGNGSL---------RANVAARI------------------ 212
F+ R+ +D+ C + ++ R ++A I
Sbjct: 531 VATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIED 590
Query: 213 ---------------DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVN 257
D TY+ ++ G+C + R+++A+ + L P+ ++ IL++
Sbjct: 591 ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIH 650
Query: 258 AYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAP 317
C ++ AI+ M E+G KP+ VT+ L++ F ++ +++ + + ++M EKGI+P
Sbjct: 651 VLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISP 710
Query: 318 TLETYNSLINGY---GRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAE 374
++ +Y+ +I+G GR+ F + I+ K + P+V++Y LI CK +L++A
Sbjct: 711 SIVSYSIIIDGLCKRGRVDEATNIFH--QAIDAK-LLPDVVAYAILIRGYCKVGRLVEAA 767
Query: 375 IVLGDMASRG 384
++ M G
Sbjct: 768 LLYEHMLRNG 777
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 163/345 (47%), Gaps = 41/345 (11%)
Query: 10 VRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMG 69
+ S N++ + L Q E + + +++ G P+VV++ + ++D+ F+L
Sbjct: 252 IVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFK 310
Query: 70 CMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVG 129
ME+ + P + Y+ ++ G K + KLF + LH+ + + V +++ ID Y K G
Sbjct: 311 VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG 370
Query: 130 EMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRI 189
++ A + RM P+V+TY L+ GLC GR+ +A + ++ G P I
Sbjct: 371 DLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPS----I 426
Query: 190 VFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQ 249
V TYS+L++GFC+ G + + +++ G P
Sbjct: 427 V-------------------------TYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 250 ISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKK 309
+ Y +LV+ +G + A++ + +M + ++ + V FN+LI+ +C D+A + +
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 310 MLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNV 354
M GI P + T+ +++ R+S I+E+ K MKP +
Sbjct: 522 MGIYGIKPDVATFTTVM----RVS-------IMEDAFCKHMKPTI 555
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 171/396 (43%), Gaps = 78/396 (19%)
Query: 3 KDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEA----AVML 58
K G+ PS+ + + L + A++ DM++ G PDVV YG V+ +ML
Sbjct: 419 KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLML 478
Query: 59 KDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTY 118
+ +++G + + +V V+N ++ G C++ R +A K+F M + P+ T+
Sbjct: 479 HAMRFSVKMLG----QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATF 534
Query: 119 NTLI------DGYCKVGEME---KAFSLKARMKAP------------------------- 144
T++ D +CK + + F L R K
Sbjct: 535 TTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKF 594
Query: 145 -------NAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSAC 197
EP ++TYN ++ G CS R+++A + ++ F P
Sbjct: 595 FNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP-------------- 640
Query: 198 SNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVN 257
+ T + L++ C+ ++ A + + + E G P+ ++Y L++
Sbjct: 641 ---------------NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMD 685
Query: 258 AYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAP 317
+ +E + + E+M+E+G+ PS V+++ +I+ C+ G VD+A + ++ + P
Sbjct: 686 WFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLP 745
Query: 318 TLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPN 353
+ Y LI GY ++ V+ + E + + G+KP+
Sbjct: 746 DVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 111/250 (44%), Gaps = 29/250 (11%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+++ + + N + L + E F +++E + PD+V+Y + L+
Sbjct: 563 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 622
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
LD+ + ++ GP+ +++ LCK + A ++F M + PN VTY
Sbjct: 623 LDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGC 682
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L+D + K ++E +F L M+ PS+++Y+ ++ GLC GRV++A + +
Sbjct: 683 LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAK 742
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
LP D Y+ L+ G+C+VGR+ +A + +
Sbjct: 743 LLP-----------------------------DVVAYAILIRGYCKVGRLVEAALLYEHM 773
Query: 241 VENGVVPSQI 250
+ NGV P +
Sbjct: 774 LRNGVKPDDL 783
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 93/169 (55%)
Query: 216 TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQM 275
T+ L+NGFC+ G +++A ++ + + G+ P I+Y+ L++ Y G + + Q
Sbjct: 288 TFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQA 347
Query: 276 EERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNF 335
+G+K V F++ I+ + ++G++ A K+ML +GI+P + TY LI G +
Sbjct: 348 LHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI 407
Query: 336 VKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ F + +I K+GM+P++++Y SLI+ CK L + DM G
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 146/310 (47%), Gaps = 30/310 (9%)
Query: 99 ARKLFDEML--------------HRNLVPNTVTYNTLIDGYCKVGEMEKA---FSLKARM 141
A K+FDEM+ R+L + + L++ C+ G ++KA F ++
Sbjct: 118 ADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQL 175
Query: 142 KAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGN 201
+ SV +L L S RV+ + ++ G P G S F D+ G
Sbjct: 176 GVVIPQDSVYR---MLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGE 232
Query: 202 GSLRANVAARIDERTY-------SALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNI 254
+ + + ER + + +L G V +IE A +L+ +++ G P+ +++
Sbjct: 233 VTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCT 291
Query: 255 LVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKG 314
L+N +C G +++A + ME+RG++P + ++TLI+ + + G + + + L KG
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
Query: 315 IAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAE 374
+ + ++S I+ Y + + + + + +G+ PNV++Y LI LC+D ++ +A
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
Query: 375 IVLGDMASRG 384
+ G + RG
Sbjct: 412 GMYGQILKRG 421
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 157/328 (47%), Gaps = 30/328 (9%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
MR + PS ++ + E + + +K + +F +M E G D+ S+ ++ K
Sbjct: 117 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 176
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
++K +EL + + R YN++L G C ++R A ++ EM+ R + PN TYNT
Sbjct: 177 VEKAYELFRAL-RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNT 235
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
++ G+ + G++ A+ MK + E V+TY ++ G +G + AR V EM G
Sbjct: 236 MLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG 295
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
LP +VA TY+A++ C+ +E A + ++
Sbjct: 296 VLP-----------------------SVA------TYNAMIQVLCKKDNVENAVVMFEEM 326
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
V G P+ +YN+L+ H G + + ++ME G +P++ T+N +I + E EV
Sbjct: 327 VRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEV 386
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLING 328
++A +KM P L+TYN LI+G
Sbjct: 387 EKALGLFEKMGSGDCLPNLDTYNILISG 414
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 160/353 (45%), Gaps = 31/353 (8%)
Query: 29 VLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLG 88
V ++ M I P ++ E DK +L M + + +N +L
Sbjct: 110 VWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILD 169
Query: 89 GLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEP 148
LCK +RV+ A +LF + R V +TVTYN +++G+C + KA + M P
Sbjct: 170 VLCKSKRVEKAYELFRALRGRFSV-DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINP 228
Query: 149 SVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANV 208
++ TYN +L G +G++ A E +EM+
Sbjct: 229 NLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRD---------------------------- 260
Query: 209 AARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKA 268
ID TY+ +++GF G I++A+ V +++ GV+PS +YN ++ C + VE A
Sbjct: 261 -CEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENA 319
Query: 269 IQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLING 328
+ E+M RG +P+ T+N LI GE + E +++M +G P +TYN +I
Sbjct: 320 VVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRY 379
Query: 329 YGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMA 381
Y S K + E++ PN+ +Y LI+ + RK + +V G+ A
Sbjct: 380 YSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFV-RKRSEDMVVAGNQA 431
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 141/287 (49%), Gaps = 15/287 (5%)
Query: 108 HRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVN 167
HR V + +++ ID ++ +SL RM++ PS T+ + S+G+ +
Sbjct: 84 HREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPD 143
Query: 168 DAREVLVEMEGNGFLP--GGFSRIVFDDDSACSNGN--------GSLRANVAARIDERTY 217
A ++ + M +G F+ I+ D C + +LR + +D TY
Sbjct: 144 KAVKLFLNMHEHGCFQDLASFNTIL---DVLCKSKRVEKAYELFRALRGRFS--VDTVTY 198
Query: 218 SALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEE 277
+ +LNG+C + R KA EVL ++VE G+ P+ +YN ++ + G + A + +M++
Sbjct: 199 NVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKK 258
Query: 278 RGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVK 337
R + VT+ T+++ F GE+ +A +M+ +G+ P++ TYN++I + N
Sbjct: 259 RDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVEN 318
Query: 338 CFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ EE+ ++G +PNV +Y LI L + E ++ M + G
Sbjct: 319 AVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEG 365
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 35/203 (17%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G+ P++ + N + + + Q F +M + DVV+Y V + +
Sbjct: 221 MVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGE 280
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVT--- 117
+ + + M +E V PSV YN ++ LCK V++A +F+EM+ R PN T
Sbjct: 281 IKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNV 340
Query: 118 --------------------------------YNTLIDGYCKVGEMEKAFSLKARMKAPN 145
YN +I Y + E+EKA L +M + +
Sbjct: 341 LIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGD 400
Query: 146 AEPSVITYNCLLGGLCSSGRVND 168
P++ TYN L+ G+ R D
Sbjct: 401 CLPNLDTYNILISGMFVRKRSED 423
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 168/362 (46%), Gaps = 36/362 (9%)
Query: 30 LAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGG 89
L VF M + P +Y + V L+ F+ M + + P+V N+++
Sbjct: 106 LRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKA 165
Query: 90 LCKVRRVKDA-RKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEP 148
LC+ DA K+F EM R P++ TY TLI G C+ G +++A L M + P
Sbjct: 166 LCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAP 225
Query: 149 SVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANV 208
+V+TY L+ GLC S V++A L EM+ G P F
Sbjct: 226 TVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVF---------------------- 263
Query: 209 AARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKA 268
TYS+L++G C+ GR +A E+ ++ G P+ ++Y L+ C E +++A
Sbjct: 264 -------TYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEA 316
Query: 269 IQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLING 328
++ ++M +GLKP + +I+ FC + +A ++ +M+ GI P T+N +
Sbjct: 317 VELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKT 376
Query: 329 Y-----GRISNF-VKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMAS 382
G +N+ + F + + +G+ V + SL+ CLCK + A ++ ++ +
Sbjct: 377 SNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVT 436
Query: 383 RG 384
G
Sbjct: 437 DG 438
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 152/334 (45%), Gaps = 38/334 (11%)
Query: 1 MRKDGVLPSVRSVNRLFETLV-GSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLK 59
MR+ G+ P+V S+N L + L + L +F +M + G PD +YG +
Sbjct: 147 MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFG 206
Query: 60 DLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYN 119
+D+ +L M ++ P+V Y ++ GLC + V +A + +EM + + PN TY+
Sbjct: 207 RIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYS 266
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN 179
+L+DG CK G +A L M A P+++TY L+ GLC ++ +A E+L M
Sbjct: 267 SLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQ 326
Query: 180 GFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAK 239
G P D Y +++GFC + + +A L +
Sbjct: 327 GLKP-----------------------------DAGLYGKVISGFCAISKFREAANFLDE 357
Query: 240 LVENGVVPSQISYNI-------LVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLIN 292
++ G+ P+++++NI +V C Y +A M RG+ T +L+
Sbjct: 358 MILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSRGISVEVETLESLVK 416
Query: 293 KFCETGEVDQAERWVKKMLEKGIAPTLETYNSLI 326
C+ GE +A + V +++ G P+ T+ LI
Sbjct: 417 CLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 172/371 (46%), Gaps = 33/371 (8%)
Query: 14 NRLFETLVGSKQFEKVLAVF---TDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGC 70
+++ + + K EK +AVF T +G D S+G V V +L+
Sbjct: 17 SQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVR 76
Query: 71 MEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGE 130
M+ E S + + G +V R D+ ++F +M + P+ Y T++ + +
Sbjct: 77 MKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQ 136
Query: 131 MEKAFSLKARMKAPNAEPSVITYNCLLGGLC-SSGRVNDAREVLVEMEGNGFLPGGFSRI 189
+ AF M+ P+V + N L+ LC + G V+ ++ +EM G P
Sbjct: 137 LNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDP------ 190
Query: 190 VFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQ 249
D TY L++G CR GRI++AK++ ++VE P+
Sbjct: 191 -----------------------DSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTV 227
Query: 250 ISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKK 309
++Y L+N C V++A++ E+M+ +G++P+ T+++L++ C+ G QA +
Sbjct: 228 VTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEM 287
Query: 310 MLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRK 369
M+ +G P + TY +LI G + + E+L+ + +G+KP+ YG +I+ C K
Sbjct: 288 MMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISK 347
Query: 370 LLDAEIVLGDM 380
+A L +M
Sbjct: 348 FREAANFLDEM 358
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 135/286 (47%), Gaps = 18/286 (6%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K G P + L L + ++ +FT+MVE P VV+Y + K+
Sbjct: 183 MPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKN 242
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D+ + M+ + + P+VF Y+ ++ GLCK R A +LF+ M+ R PN VTY T
Sbjct: 243 VDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTT 302
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI G CK ++++A L RM +P Y ++ G C+ + +A L EM G
Sbjct: 303 LITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGG 362
Query: 181 FLPGGFSRIVFDDDSACSNG-NGSLRANVAAR--------------IDERTYSALLNGFC 225
P +R+ ++ SN L AN +R ++ T +L+ C
Sbjct: 363 ITP---NRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLC 419
Query: 226 RVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQT 271
+ G +KA +++ ++V +G +PS+ ++ +L+ + V +A T
Sbjct: 420 KKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDT 465
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 143/293 (48%), Gaps = 12/293 (4%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P++ + + + + +F ++ E G+ PD V Y ++ L DK F+
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
G + K PS+ +++G + + DA +F M L + VTYN L+ GY K
Sbjct: 431 FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
++ K F L M++ P V TYN L+ + G +++A E++ E+ GF+P S
Sbjct: 491 THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVP---S 547
Query: 188 RIVFDDDSACSNGNGSLR---------ANVAARIDERTYSALLNGFCRVGRIEKAKEVLA 238
+ F D + G + A++ + D T SALL+G+C+ R+EKA +
Sbjct: 548 TLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFN 607
Query: 239 KLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLI 291
KL++ G+ P + YN L++ YC G +EKA + M +RG+ P+ T + L+
Sbjct: 608 KLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 172/391 (43%), Gaps = 61/391 (15%)
Query: 26 FEKVLAVFTDMVESGIRPDVVSY----------GKAVEAAVMLKDLD------------- 62
F+K + M GIRPD+V++ G EA +L L
Sbjct: 287 FDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSS 346
Query: 63 --KGF-------ELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVP 113
GF E + + R+ P++FVY+ L +C + A +F E+ L+P
Sbjct: 347 VIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLP 406
Query: 114 NTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVL 173
+ V Y T+IDGYC +G +KAF + PS+ T L+G G ++DA V
Sbjct: 407 DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVF 466
Query: 174 VEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKA 233
M+ G ++D TY+ L++G+ + ++ K
Sbjct: 467 RNMKTEGL-----------------------------KLDVVTYNNLMHGYGKTHQLNKV 497
Query: 234 KEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINK 293
E++ ++ G+ P +YNIL+++ GY+++A + ++ RG PS + F +I
Sbjct: 498 FELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557
Query: 294 FCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPN 353
F + G+ +A M + + P + T ++L++GY + K + ++ G+KP+
Sbjct: 558 FSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPD 617
Query: 354 VISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
V+ Y +LI+ C + A ++G M RG
Sbjct: 618 VVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 183/409 (44%), Gaps = 35/409 (8%)
Query: 5 GVLPSVRSVNRLFETLVG------------------SKQFEKVLAVFTDMVESGIRPDVV 46
GV S RS++R+ LV S + + V D+ E+ I V+
Sbjct: 141 GVEHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGEERSLCLVMKDLFETRIDRRVL 200
Query: 47 S--YGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFD 104
+ ++ + + ++ +L +++ + PS V +L + +V ++ AR+ +
Sbjct: 201 ETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVE 260
Query: 105 EMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSG 164
ML R N + I YC G +K + L MK P ++ + + LC +G
Sbjct: 261 HMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAG 320
Query: 165 RVNDAREVLVEMEGNGF---------LPGGFSRIVFDDDSACSNGNGSLRANVAARIDER 215
+ +A VL +++ G + GF ++ +++ + LR N+
Sbjct: 321 FLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFV----- 375
Query: 216 TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQM 275
YS+ L+ C G + +A + ++ E G++P + Y +++ YC+ G +KA Q +
Sbjct: 376 -YSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGAL 434
Query: 276 EERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNF 335
+ G PS T LI G + AE + M +G+ + TYN+L++GYG+
Sbjct: 435 LKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQL 494
Query: 336 VKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
K FE+++E+ G+ P+V +Y LI+ + + +A ++ ++ RG
Sbjct: 495 NKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRG 543
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+ +G+ V + N L + Q KV + +M +GI PDV +Y + + V+
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY 528
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D+ E++ + + PS + V+GG K ++A L+ M + P+ VT +
Sbjct: 529 IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSA 588
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L+ GYCK MEKA L ++ +P V+ YN L+ G CS G + A E++ M G
Sbjct: 589 LLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Query: 181 FLP 183
LP
Sbjct: 649 MLP 651
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 81/160 (50%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
MR G+ P V + N L ++V ++ + ++++ G P +++ + D
Sbjct: 504 MRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGD 563
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ F L M R+ P V + +L G CK +R++ A LF+++L L P+ V YNT
Sbjct: 564 FQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNT 623
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGL 160
LI GYC VG++EKA L M P+ T++ L+ GL
Sbjct: 624 LIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 143/293 (48%), Gaps = 12/293 (4%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P++ + + + + +F ++ E G+ PD V Y ++ L DK F+
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
G + K PS+ +++G + + DA +F M L + VTYN L+ GY K
Sbjct: 431 FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
++ K F L M++ P V TYN L+ + G +++A E++ E+ GF+P S
Sbjct: 491 THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVP---S 547
Query: 188 RIVFDDDSACSNGNGSLR---------ANVAARIDERTYSALLNGFCRVGRIEKAKEVLA 238
+ F D + G + A++ + D T SALL+G+C+ R+EKA +
Sbjct: 548 TLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFN 607
Query: 239 KLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLI 291
KL++ G+ P + YN L++ YC G +EKA + M +RG+ P+ T + L+
Sbjct: 608 KLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 172/391 (43%), Gaps = 61/391 (15%)
Query: 26 FEKVLAVFTDMVESGIRPDVVSY----------GKAVEAAVMLKDLD------------- 62
F+K + M GIRPD+V++ G EA +L L
Sbjct: 287 FDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSS 346
Query: 63 --KGF-------ELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVP 113
GF E + + R+ P++FVY+ L +C + A +F E+ L+P
Sbjct: 347 VIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLP 406
Query: 114 NTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVL 173
+ V Y T+IDGYC +G +KAF + PS+ T L+G G ++DA V
Sbjct: 407 DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVF 466
Query: 174 VEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKA 233
M+ G ++D TY+ L++G+ + ++ K
Sbjct: 467 RNMKTEGL-----------------------------KLDVVTYNNLMHGYGKTHQLNKV 497
Query: 234 KEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINK 293
E++ ++ G+ P +YNIL+++ GY+++A + ++ RG PS + F +I
Sbjct: 498 FELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557
Query: 294 FCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPN 353
F + G+ +A M + + P + T ++L++GY + K + ++ G+KP+
Sbjct: 558 FSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPD 617
Query: 354 VISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
V+ Y +LI+ C + A ++G M RG
Sbjct: 618 VVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 183/409 (44%), Gaps = 35/409 (8%)
Query: 5 GVLPSVRSVNRLFETLVG------------------SKQFEKVLAVFTDMVESGIRPDVV 46
GV S RS++R+ LV S + + V D+ E+ I V+
Sbjct: 141 GVEHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGEERSLCLVMKDLFETRIDRRVL 200
Query: 47 S--YGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFD 104
+ ++ + + ++ +L +++ + PS V +L + +V ++ AR+ +
Sbjct: 201 ETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVE 260
Query: 105 EMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSG 164
ML R N + I YC G +K + L MK P ++ + + LC +G
Sbjct: 261 HMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAG 320
Query: 165 RVNDAREVLVEMEGNGF---------LPGGFSRIVFDDDSACSNGNGSLRANVAARIDER 215
+ +A VL +++ G + GF ++ +++ + LR N+
Sbjct: 321 FLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFV----- 375
Query: 216 TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQM 275
YS+ L+ C G + +A + ++ E G++P + Y +++ YC+ G +KA Q +
Sbjct: 376 -YSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGAL 434
Query: 276 EERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNF 335
+ G PS T LI G + AE + M +G+ + TYN+L++GYG+
Sbjct: 435 LKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQL 494
Query: 336 VKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
K FE+++E+ G+ P+V +Y LI+ + + +A ++ ++ RG
Sbjct: 495 NKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRG 543
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+ +G+ V + N L + Q KV + +M +GI PDV +Y + + V+
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY 528
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D+ E++ + + PS + V+GG K ++A L+ M + P+ VT +
Sbjct: 529 IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSA 588
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L+ GYCK MEKA L ++ +P V+ YN L+ G CS G + A E++ M G
Sbjct: 589 LLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Query: 181 FLP 183
LP
Sbjct: 649 MLP 651
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 81/160 (50%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
MR G+ P V + N L ++V ++ + ++++ G P +++ + D
Sbjct: 504 MRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGD 563
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ F L M R+ P V + +L G CK +R++ A LF+++L L P+ V YNT
Sbjct: 564 FQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNT 623
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGL 160
LI GYC VG++EKA L M P+ T++ L+ GL
Sbjct: 624 LIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 176/369 (47%), Gaps = 8/369 (2%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G+ P+V + L + L + + ++ +++ G+ P +V+Y ++ +L G
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
F L M K P V +Y +++ GL K + A + +ML +++ N V +N+LIDG
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
+C++ ++A + M +P V T+ ++ GR+ +A + M G P
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPD 565
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSA-------LLNGFCRVGRIEKAKEVL 237
+ D + C + ++ + + SA +++ + RIE A +
Sbjct: 566 ALAYCTLID-AFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFF 624
Query: 238 AKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCET 297
L+E + P ++YN ++ YC +++A + E ++ P+ VT LI+ C+
Sbjct: 625 NNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKN 684
Query: 298 GEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISY 357
++D A R M EKG P TY L++ + + + F++ EE+++KG+ P+++SY
Sbjct: 685 NDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSY 744
Query: 358 GSLINCLCK 366
+I+ LCK
Sbjct: 745 SIIIDGLCK 753
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 190/390 (48%), Gaps = 14/390 (3%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVS-YGKAVEAAVMLKDLDK 63
GV+ SV R+ +L+GS + + + F + GI P VS +G ++A ++ K
Sbjct: 176 GVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTK 235
Query: 64 GFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLID 123
+ + + + N VL GL V +++ A +L +L PN VT+ TLI+
Sbjct: 236 ALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLIN 294
Query: 124 GYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP 183
G+CK GEM++AF L M+ EP +I Y+ L+ G +G + ++ + G
Sbjct: 295 GFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGV-- 352
Query: 184 GGFSRIVFDD--DSACSNGNGSLRANVAARI-------DERTYSALLNGFCRVGRIEKAK 234
+VF D +G+ + + V R+ + TY+ L+ G C+ GRI +A
Sbjct: 353 -KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
+ ++++ G+ PS ++Y+ L++ +C G + E M + G P V + L++
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471
Query: 295 CETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNV 354
+ G + A R+ KML + I + +NSLI+G+ R++ F + ++ + G+KP+V
Sbjct: 472 SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDV 531
Query: 355 ISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
++ +++ + +L +A + M G
Sbjct: 532 ATFTTVMRVSIMEGRLEEALFLFFRMFKMG 561
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 184/419 (43%), Gaps = 64/419 (15%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G+ P + + + L + + +F+ + G++ DVV + ++ V D
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L + M + + P+V Y +++ GLC+ R+ +A ++ ++L R + P+ VTY++
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LIDG+CK G + F+L M P V+ Y L+ GL G + A V+M G
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ- 490
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
S+R NV +++L++G+CR+ R ++A +V +
Sbjct: 491 ----------------------SIRLNVV------VFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCET--- 297
G+ P ++ ++ EG +E+A+ +M + GL+P + + TLI+ FC+
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKP 582
Query: 298 --------------------------------GEVDQAERWVKKMLEKGIAPTLETYNSL 325
++ A ++ ++E + P + TYN++
Sbjct: 583 TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTM 642
Query: 326 INGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
I GY + + I E ++ PN ++ LI+ LCK+ + A + MA +G
Sbjct: 643 ICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 701
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 151/340 (44%), Gaps = 29/340 (8%)
Query: 14 NRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEK 73
N L + +F++ L VF M GI+PDV ++ + ++M L++ L M K
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK 559
Query: 74 ERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEK 133
+ P Y ++ CK + +LFD M + + N +I K +E
Sbjct: 560 MGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIED 619
Query: 134 AFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDD 193
A + EP ++TYN ++ G CS R+++A + ++ F P
Sbjct: 620 ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP---------- 669
Query: 194 DSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYN 253
+ T + L++ C+ ++ A + + + E G P+ ++Y
Sbjct: 670 -------------------NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYG 710
Query: 254 ILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK 313
L++ + +E + + E+M+E+G+ PS V+++ +I+ C+ G VD+A + ++
Sbjct: 711 CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA 770
Query: 314 GIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPN 353
+ P + Y LI GY ++ V+ + E + + G+KP+
Sbjct: 771 KLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 129/290 (44%), Gaps = 47/290 (16%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G+ P V + + + + E+ L +F M + G+ PD ++Y ++A G
Sbjct: 526 GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIG 585
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
+L M++ ++ + V N+V+ L K R++DA K F+ ++ + P+ VTYNT+I G
Sbjct: 586 LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 645
Query: 125 YC---KVGEMEKAFSL-KARMKAPN-------------------------------AEPS 149
YC ++ E E+ F L K PN ++P+
Sbjct: 646 YCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPN 705
Query: 150 VITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG--GFSRIVFDDDSACSNGNGSLRAN 207
+TY CL+ S + + ++ EM+ G P +S I+ D C G N
Sbjct: 706 AVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIII---DGLCKRGRVDEATN 762
Query: 208 VAAR-IDER------TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQI 250
+ + ID + Y+ L+ G+C+VGR+ +A + ++ NGV P +
Sbjct: 763 IFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 146/310 (47%), Gaps = 30/310 (9%)
Query: 99 ARKLFDEML--------------HRNLVPNTVTYNTLIDGYCKVGEMEKA---FSLKARM 141
A K+FDEM+ R+L + + L++ C+ G ++KA F ++
Sbjct: 118 ADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQL 175
Query: 142 KAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGN 201
+ SV +L L S RV+ + ++ G P G S F D+ G
Sbjct: 176 GVVIPQDSVYR---MLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGE 232
Query: 202 GSLRANVAARIDERTY-------SALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNI 254
+ + + ER + + +L G V +IE A +L+ +++ G P+ +++
Sbjct: 233 VTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCT 291
Query: 255 LVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKG 314
L+N +C G +++A + ME+RG++P + ++TLI+ + + G + + + L KG
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
Query: 315 IAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAE 374
+ + ++S I+ Y + + + + + +G+ PNV++Y LI LC+D ++ +A
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
Query: 375 IVLGDMASRG 384
+ G + RG
Sbjct: 412 GMYGQILKRG 421
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 163/358 (45%), Gaps = 24/358 (6%)
Query: 37 VESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRV 96
+ S I D+ GK LD L M V P + +N +L GLCK +
Sbjct: 123 IHSSIMRDLCLQGK----------LDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYI 172
Query: 97 KDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCL 156
+ A L EM PN V+YNTLI G C V ++KA L M P+ +T N +
Sbjct: 173 EKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNII 232
Query: 157 LGGLCSSGRVND-----AREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAAR 211
+ LC G + + E+L + N L I+ D S NGN V
Sbjct: 233 VHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMD--SCFKNGNVVQALEVWKE 290
Query: 212 IDER-------TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGY 264
+ ++ Y+ ++ G C G + A + +V+ GV P +YN L++A C EG
Sbjct: 291 MSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGK 350
Query: 265 VEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNS 324
++A M+ G+ P +++ +I C G+V++A ++ ML+ + P + +N
Sbjct: 351 FDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNV 410
Query: 325 LINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMAS 382
+I+GYGR + +L + G+KPNV + +LI+ K +L+DA V +M S
Sbjct: 411 VIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRS 468
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 187/397 (47%), Gaps = 16/397 (4%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M GV+P + + N L L + EK + +M E G P+ VSY ++ + +
Sbjct: 147 MIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNN 206
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRV-KDARKLFDEML---HRNLVPNTV 116
+DK L M K + P+ N+++ LC+ + + +KL +E+L N + V
Sbjct: 207 VDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIV 266
Query: 117 TYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEM 176
L+D K G + +A + M N + YN ++ GLCSSG + A + +M
Sbjct: 267 ICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDM 326
Query: 177 EGNGFLPGGFSRIVFDD--------DSACSNGNGSLRANVAARIDERTYSALLNGFCRVG 228
G P F+ D AC + +G+++ N D+ +Y ++ G C G
Sbjct: 327 VKRGVNPDVFTYNTLISALCKEGKFDEAC-DLHGTMQ-NGGVAPDQISYKVIIQGLCIHG 384
Query: 229 RIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFN 288
+ +A E L ++++ ++P + +N++++ Y G A+ M G+KP+ T N
Sbjct: 385 DVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNN 444
Query: 289 TLINKFCETGEVDQAERWVK-KMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEK 347
LI+ + + G + A WVK +M I P TYN L+ + + F++ +E+ +
Sbjct: 445 ALIHGYVKGGRLIDA-WWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLR 503
Query: 348 KGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+G +P++I+Y L+ LC +L AE +L + + G
Sbjct: 504 RGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATG 540
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 162/380 (42%), Gaps = 51/380 (13%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEA------ 54
MR+ G P+ S N L + L +K L +F M + GIRP+ V+ V A
Sbjct: 182 MREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGV 241
Query: 55 --------------------------AVMLKD-------LDKGFELMGCMEKERVGPSVF 81
+L D + + E+ M ++ V
Sbjct: 242 IGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSV 301
Query: 82 VYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARM 141
VYN+++ GLC + A +M+ R + P+ TYNTLI CK G+ ++A L M
Sbjct: 302 VYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTM 361
Query: 142 KAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP---------GGFSRIVFD 192
+ P I+Y ++ GLC G VN A E L+ M + LP G+ R D
Sbjct: 362 QNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGR-YGD 420
Query: 193 DDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISY 252
SA S N L V + T +AL++G+ + GR+ A V ++ + P +Y
Sbjct: 421 TSSALSVLNLMLSYGVKPNV--YTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTY 478
Query: 253 NILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLE 312
N+L+ A C G++ A Q ++M RG +P +T+ L+ C G + +AE + ++
Sbjct: 479 NLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQA 538
Query: 313 KGIAPTLETYNSLINGYGRI 332
GI + L Y R+
Sbjct: 539 TGITIDHVPFLILAKKYTRL 558
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 122/298 (40%), Gaps = 29/298 (9%)
Query: 14 NRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEK 73
N + L S DMV+ G+ PDV +Y + A D+ +L G M+
Sbjct: 304 NVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQN 363
Query: 74 ERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEK 133
V P Y +++ GLC V A + ML +L+P + +N +IDGY + G+
Sbjct: 364 GGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSS 423
Query: 134 AFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDD 193
A S+ M + +P+V T N L+ G GR+ DA V EM P
Sbjct: 424 ALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHP---------- 473
Query: 194 DSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYN 253
D TY+ LL C +G + A ++ +++ G P I+Y
Sbjct: 474 -------------------DTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYT 514
Query: 254 ILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKML 311
LV C +G ++KA +++ G+ +V F L K+ +A KK L
Sbjct: 515 ELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWL 572
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 182/354 (51%), Gaps = 19/354 (5%)
Query: 6 VLPSVRSVNRLFETLV--GSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDK 63
V PS+ +++ L+ G + L ++ G++P+ + V+ D++
Sbjct: 156 VKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKH-NLGLQPNTCIFNILVKHHCKNGDINF 214
Query: 64 GFELMGCMEKERVG-PSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRN-LVPNTVTYNTL 121
F ++ M++ + P+ Y+ ++ L R K+A +LF++M+ + + P+ VT+N +
Sbjct: 215 AFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVM 274
Query: 122 IDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGF 181
I+G+C+ GE+E+A + MK P+V Y+ L+ G C G++ +A++ E++ G
Sbjct: 275 INGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGL 334
Query: 182 LPG--GFSRIVFDDDSACSNGN--------GSLRANVAARIDERTYSALLNGFCRVGRIE 231
G++ ++ + C NG G ++A+ R D TY+ +L G GR E
Sbjct: 335 KLDTVGYTTLM---NCFCRNGETDEAMKLLGEMKAS-RCRADTLTYNVILRGLSSEGRSE 390
Query: 232 KAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLI 291
+A ++L + GV ++ SY I++NA C G +EKA++ M ERG+ P + T+N L+
Sbjct: 391 EALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELV 450
Query: 292 NKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEI 345
+ CE+G + R + L G+ P +++ +++ + V FE+L+ +
Sbjct: 451 VRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSL 504
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 171/373 (45%), Gaps = 33/373 (8%)
Query: 16 LFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEK-E 74
L + LV K+F V A+ M R + + DK E+ ++
Sbjct: 95 LLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIA 154
Query: 75 RVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHR-NLVPNTVTYNTLIDGYCKVGEMEK 133
RV PS+ + L L V +RKL H L PNT +N L+ +CK G++
Sbjct: 155 RVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINF 214
Query: 134 AFSLKARMKAPN-AEPSVITYNCLLGGLCSSGRVNDAREVLVEM-EGNGFLPGGFSRIVF 191
AF + MK + P+ ITY+ L+ L + R +A E+ +M G P
Sbjct: 215 AFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISP-------- 266
Query: 192 DDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQIS 251
D T++ ++NGFCR G +E+AK++L + +NG P+ +
Sbjct: 267 ---------------------DPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYN 305
Query: 252 YNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKML 311
Y+ L+N +C G +++A QT +++++ GLK V + TL+N FC GE D+A + + +M
Sbjct: 306 YSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMK 365
Query: 312 EKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLL 371
TYN ++ G + ++L++ +G+ N SY ++N LC + +L
Sbjct: 366 ASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELE 425
Query: 372 DAEIVLGDMASRG 384
A L M+ RG
Sbjct: 426 KAVKFLSVMSERG 438
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 144/298 (48%), Gaps = 31/298 (10%)
Query: 1 MRKDGV-LPSVRSVNRLFETLVGSKQFEKVLAVFTDMV-ESGIRPDVVSYGKAVEAAVML 58
M++ G+ P+ + + L + L + ++ + +F DM+ + GI PD V++ +
Sbjct: 222 MKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRA 281
Query: 59 KDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTY 118
++++ +++ M+K P+V+ Y+ ++ G CKV ++++A++ FDE+ L +TV Y
Sbjct: 282 GEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGY 341
Query: 119 NTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEG 178
TL++ +C+ GE ++A L MKA +TYN +L GL S GR +A ++L +
Sbjct: 342 TTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGS 401
Query: 179 NGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLA 238
G +++ +Y +LN C G +EKA + L+
Sbjct: 402 EG-----------------------------VHLNKGSYRIILNALCCNGELEKAVKFLS 432
Query: 239 KLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCE 296
+ E G+ P ++N LV C GY E ++ GL P ++ ++ C+
Sbjct: 433 VMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICK 490
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 147/321 (45%), Gaps = 62/321 (19%)
Query: 82 VYNLVLGGLCKVRRVKDARKLFDEM------LHRNLVPNTVTYNTLIDGYCKVGEMEKAF 135
Y+++L L + ++ + +M +L N + + + D + KV EM
Sbjct: 91 TYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLI 150
Query: 136 SLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN-GFLPGG--FSRIVFD 192
+ AR+K PS+ + L L SG VN +R++L+ + N G P F+ +V
Sbjct: 151 QVIARVK-----PSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILV-- 203
Query: 193 DDSACSNGNGSLRANVAARI--------DERTYSALLNGFCRVGRIEKAKEVLAKLV-EN 243
C NG+ + V + + TYS L++ R ++A E+ ++ +
Sbjct: 204 -KHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKE 262
Query: 244 GVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQA 303
G+ P +++N+++N +C G VE+A + + M++ G P+ ++ L+N FC+ G++ +A
Sbjct: 263 GISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEA 322
Query: 304 ERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINC 363
+ + +E++K G+K + + Y +L+NC
Sbjct: 323 K-----------------------------------QTFDEVKKTGLKLDTVGYTTLMNC 347
Query: 364 LCKDRKLLDAEIVLGDM-ASR 383
C++ + +A +LG+M ASR
Sbjct: 348 FCRNGETDEAMKLLGEMKASR 368
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 172/365 (47%), Gaps = 6/365 (1%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K G+ P V + + E + K + VF M++ R + V ++ + +
Sbjct: 317 MEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGN 376
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ ++L + + YN+ L K+ +V++A +LF EM + + P+ + Y T
Sbjct: 377 FSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTT 436
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI G C G+ AF L M P ++ YN L GGL ++G +A E L ME G
Sbjct: 437 LIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRG 496
Query: 181 FLPGGFSRIVFDD---DSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVL 237
P + + + D+ + + ++ + E ++++ GFC G ++ A E
Sbjct: 497 VKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSREND-ASMVKGFCAAGCLDHAFERF 555
Query: 238 AKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCET 297
+L +P + + + + + Y+ KA ++M + G++P + LI +C
Sbjct: 556 IRL--EFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRV 613
Query: 298 GEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISY 357
V +A + + ++ K I P L TY +IN Y R++ + + + E+++++ +KP+V++Y
Sbjct: 614 NNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTY 673
Query: 358 GSLIN 362
L+N
Sbjct: 674 SVLLN 678
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 149/304 (49%), Gaps = 9/304 (2%)
Query: 16 LFETLVGSKQF-EKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKE 74
LF +L K + K + M + G+ P+ YGK + A + ++ K E + +
Sbjct: 570 LFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTK 629
Query: 75 RVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKA 134
++ P +F Y +++ C++ K A LF++M R++ P+ VTY+ L++ +
Sbjct: 630 KIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPE 682
Query: 135 FSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDD 194
+K M+A + P V+ Y ++ C + + +M+ +P + V +
Sbjct: 683 LDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN 742
Query: 195 SACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNI 254
N + ++A + D Y+ L++ C++G + +AK + +++E+GV P Y
Sbjct: 743 KPERNLSREMKA-FDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTA 801
Query: 255 LVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKG 314
L+ C GY+++A ++M E G+KP V + LI C G V +A + VK+MLEKG
Sbjct: 802 LIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKG 861
Query: 315 IAPT 318
I PT
Sbjct: 862 IKPT 865
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 153/324 (47%), Gaps = 43/324 (13%)
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ K +L+ M K V P +Y ++G C+V V+ AR+ F+ ++ + +VP+ TY
Sbjct: 581 ISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTI 640
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+I+ YC++ E ++A++L MK + +P V+TY+ LL S ++ RE ME
Sbjct: 641 MINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLN---SDPELDMKRE----MEAFD 693
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
+P D Y+ ++N +C + ++K + +
Sbjct: 694 VIP-----------------------------DVVYYTIMINRYCHLNDLKKVYALFKDM 724
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+VP ++Y +L+ + + +M+ +KP + LI+ C+ G++
Sbjct: 725 KRREIVPDVVTYTVLLKN-------KPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDL 777
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
+A+R +M+E G+ P Y +LI ++ + I + + + G+KP+V+ Y +L
Sbjct: 778 GEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTAL 837
Query: 361 INCLCKDRKLLDAEIVLGDMASRG 384
I C++ +L A ++ +M +G
Sbjct: 838 IAGCCRNGFVLKAVKLVKEMLEKG 861
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 137/315 (43%), Gaps = 37/315 (11%)
Query: 71 MEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGE 130
MEK + P V+VY+ ++ G K + A +F++ML + N V ++++ YC++G
Sbjct: 317 MEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGN 376
Query: 131 MEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIV 190
+A+ L + N + YN L G+V +A E+ EM G G P
Sbjct: 377 FSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAP------- 429
Query: 191 FDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQI 250
D Y+ L+ G C G+ A +++ ++ G P +
Sbjct: 430 ----------------------DVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIV 467
Query: 251 SYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKM 310
YN+L G ++A +T + ME RG+KP+YVT N +I + GE+D+AE + + +
Sbjct: 468 IYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESL 527
Query: 311 LEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKL 370
K + E S++ G+ FE +E K Y +L LC ++
Sbjct: 528 EHK----SRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKS---VYFTLFTSLCAEKDY 580
Query: 371 LD-AEIVLGDMASRG 384
+ A+ +L M G
Sbjct: 581 ISKAQDLLDRMWKLG 595
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 117/257 (45%), Gaps = 30/257 (11%)
Query: 6 VLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGF 65
++P + + + T + ++ A+F DM ++PDVV+Y +L + D
Sbjct: 631 IVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYS-------VLLNSDPEL 683
Query: 66 ELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGY 125
++ ME V P V Y +++ C + +K LF +M R +VP+ VTY L+
Sbjct: 684 DMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN- 742
Query: 126 CKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGG 185
+ +L MKA + +P V Y L+ C G + +A+ + +M +G P
Sbjct: 743 ------KPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDA 796
Query: 186 --FSRIVFDDDSACSNGNGSLR---------ANVAARIDERTYSALLNGFCRVGRIEKAK 234
++ ++ AC G L+ + D Y+AL+ G CR G + KA
Sbjct: 797 APYTALI-----ACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAV 851
Query: 235 EVLAKLVENGVVPSQIS 251
+++ +++E G+ P++ S
Sbjct: 852 KLVKEMLEKGIKPTKAS 868
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 81/169 (47%)
Query: 216 TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQM 275
Y ++ G C RIE A+ V+ + ++G+ P Y+ ++ + + KA+ +M
Sbjct: 293 AYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKM 352
Query: 276 EERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNF 335
++ + + V ++++ +C+ G +A K+ E I+ YN + G++
Sbjct: 353 LKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKV 412
Query: 336 VKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ E+ E+ KG+ P+VI+Y +LI C K DA ++ +M G
Sbjct: 413 EEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTG 461
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 131/277 (47%), Gaps = 29/277 (10%)
Query: 71 MEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGE 130
M + + V + ++ LCK +A+ LF EM + + PN +TYN +ID +C G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 131 MEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIV 190
A L M P ++T++ L+ +V++A E+ EM P
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTI---- 116
Query: 191 FDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQI 250
TY+++++GFC+ R++ AK +L + G P +
Sbjct: 117 -------------------------TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVV 151
Query: 251 SYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKM 310
+++ L+N YC V+ ++ +M RG+ + VT+ TLI+ FC+ G++D A+ + +M
Sbjct: 152 TFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM 211
Query: 311 LEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEK 347
+ G+AP T++ ++ G K F ILE+++K
Sbjct: 212 ISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 132/275 (48%), Gaps = 29/275 (10%)
Query: 106 MLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGR 165
M ++ + V ++D CK G A +L M P+V+TYNC++ C SGR
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 166 VNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFC 225
+DA ++L M P D T+SAL+N F
Sbjct: 61 WSDADQLLRHMIEKQINP-----------------------------DIVTFSALINAFV 91
Query: 226 RVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYV 285
+ ++ +A+E+ +++ + P+ I+YN +++ +C + V+ A + + M +G P V
Sbjct: 92 KERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVV 151
Query: 286 TFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEI 345
TF+TLIN +C+ VD +M +GI TY +LI+G+ ++ + ++L E+
Sbjct: 152 TFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM 211
Query: 346 EKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDM 380
G+ P+ I++ ++ LC ++L A +L D+
Sbjct: 212 ISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 128/246 (52%), Gaps = 29/246 (11%)
Query: 32 VFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLC 91
+FT+M E GI P+V++Y +++ +L+ M ++++ P + ++ ++
Sbjct: 32 LFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFV 91
Query: 92 KVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVI 151
K R+V +A +++ EML ++ P T+TYN++IDG+CK ++ A + M + P V+
Sbjct: 92 KERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVV 151
Query: 152 TYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAAR 211
T++ L+ G C + RV++ E+ EM G + AN
Sbjct: 152 TFSTLINGYCKAKRVDNGMEIFCEMHRRGIV-----------------------ANTV-- 186
Query: 212 IDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQT 271
TY+ L++GFC+VG ++ A+++L +++ GV P I+++ ++ C + + KA
Sbjct: 187 ----TYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 242
Query: 272 AEQMEE 277
E +++
Sbjct: 243 LEDLQK 248
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 109/198 (55%), Gaps = 7/198 (3%)
Query: 194 DSACSNGNGSLRANVAARIDER-------TYSALLNGFCRVGRIEKAKEVLAKLVENGVV 246
D C +GN N+ + E+ TY+ +++ FC GR A ++L ++E +
Sbjct: 18 DRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQIN 77
Query: 247 PSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERW 306
P ++++ L+NA+ E V +A + ++M + P+ +T+N++I+ FC+ VD A+R
Sbjct: 78 PDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRM 137
Query: 307 VKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCK 366
+ M KG +P + T+++LINGY + EI E+ ++G+ N ++Y +LI+ C+
Sbjct: 138 LDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQ 197
Query: 367 DRKLLDAEIVLGDMASRG 384
L A+ +L +M S G
Sbjct: 198 VGDLDAAQDLLNEMISCG 215
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 101/185 (54%), Gaps = 6/185 (3%)
Query: 200 GNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAY 259
G ++A+V +A+++ C+ G A+ + ++ E G+ P+ ++YN +++++
Sbjct: 2 GQSHIKADVVIS------TAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSF 55
Query: 260 CHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTL 319
CH G A Q M E+ + P VTF+ LIN F + +V +AE K+ML I PT
Sbjct: 56 CHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTT 115
Query: 320 ETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGD 379
TYNS+I+G+ + +L+ + KG P+V+++ +LIN CK +++ + + +
Sbjct: 116 ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 175
Query: 380 MASRG 384
M RG
Sbjct: 176 MHRRG 180
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 94/183 (51%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G+ P+V + N + ++ S ++ + M+E I PD+V++ + A V +
Sbjct: 36 MHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERK 95
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ + E+ M + + P+ YN ++ G CK RV DA+++ D M + P+ VT++T
Sbjct: 96 VSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFST 155
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI+GYCK ++ + M + +TY L+ G C G ++ A+++L EM G
Sbjct: 156 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCG 215
Query: 181 FLP 183
P
Sbjct: 216 VAP 218
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 64/137 (46%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + + P+ + N + + + + + M G PDVV++ + K
Sbjct: 106 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 165
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D G E+ M + + + Y ++ G C+V + A+ L +EM+ + P+ +T++
Sbjct: 166 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 225
Query: 121 LIDGYCKVGEMEKAFSL 137
++ G C E+ KAF++
Sbjct: 226 MLAGLCSKKELRKAFAI 242
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 188/374 (50%), Gaps = 20/374 (5%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAV---MLKDL 61
G+ +V + N L E + V M E G+ +VV+Y ++ ++++
Sbjct: 256 GLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEA 315
Query: 62 DKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTL 121
+ FEL+ EK+ V +Y +++ G C+ +++DA ++ D M+ + NT N+L
Sbjct: 316 EHVFELLK--EKKLVADQ-HMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSL 372
Query: 122 IDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDA---------REV 172
I+GYCK G++ +A + +RM + +P TYN L+ G C +G V++A +EV
Sbjct: 373 INGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEV 432
Query: 173 LVEMEGNGFLPGGFSRI-VFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIE 231
+ + L G+SRI F D S L+ V A DE + S LL ++G
Sbjct: 433 VPTVMTYNILLKGYSRIGAFHD--VLSLWKMMLKRGVNA--DEISCSTLLEALFKLGDFN 488
Query: 232 KAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLI 291
+A ++ ++ G++ I+ N++++ C V +A + + + KP+ T+ L
Sbjct: 489 EAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALS 548
Query: 292 NKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMK 351
+ + + G + +A + M KGI PT+E YN+LI+G + + K +++ E+ +G+
Sbjct: 549 HGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLT 608
Query: 352 PNVISYGSLINCLC 365
P V +YG+LI C
Sbjct: 609 PTVATYGALITGWC 622
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 144/310 (46%), Gaps = 30/310 (9%)
Query: 76 VGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHR-NLVPNTVTYNTLIDGYCKVGEMEKA 134
V P VF ++V+ C+ V A E L N VTYN+LI+GY +G++E
Sbjct: 221 VSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGM 280
Query: 135 FSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDD 194
+ M +V+TY L+ G C G + +A V ++ +
Sbjct: 281 TRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVA----------- 329
Query: 195 SACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNI 254
D+ Y L++G+CR G+I A V ++E GV + N
Sbjct: 330 ------------------DQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNS 371
Query: 255 LVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKG 314
L+N YC G + +A Q +M + LKP + T+NTL++ +C G VD+A + +M +K
Sbjct: 372 LINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKE 431
Query: 315 IAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAE 374
+ PT+ TYN L+ GY RI F + + + K+G+ + IS +L+ L K +A
Sbjct: 432 VVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAM 491
Query: 375 IVLGDMASRG 384
+ ++ +RG
Sbjct: 492 KLWENVLARG 501
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 188/434 (43%), Gaps = 88/434 (20%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + V+P+V + N L + F VL+++ M++ G+ D +S +EA L D
Sbjct: 427 MCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGD 486
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
++ +L + + N+++ GLCK+ +V +A+++ D + P TY
Sbjct: 487 FNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQA 546
Query: 121 LIDGYCKVGEMEKAFSLKARM-----------------------------------KAPN 145
L GY KVG +++AF++K M +A
Sbjct: 547 LSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARG 606
Query: 146 AEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG------------------------- 180
P+V TY L+ G C+ G ++ A EM G
Sbjct: 607 LTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEAC 666
Query: 181 -----------FLPGGFSRIVFDDDSACSNGNGSLRAN-VAARIDERT-----------Y 217
LPG S F + SA + L+ +A ++ T Y
Sbjct: 667 LLLQKIVDFDLLLPGYQSLKEFLEASATT----CLKTQKIAESVENSTPKKLLVPNNIVY 722
Query: 218 SALLNGFCRVGRIEKAKEVLAKLVENG-VVPSQISYNILVNAYCHEGYVEKAIQTAEQME 276
+ + G C+ G++E A+++ + L+ + +P + +Y IL++ G + KA ++M
Sbjct: 723 NVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMA 782
Query: 277 ERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFV 336
+G+ P+ VT+N LI C+ G VD+A+R + K+ +KGI P TYN+LI+G + N
Sbjct: 783 LKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVA 842
Query: 337 KCFEILEEIEKKGM 350
+ + E++ +KG+
Sbjct: 843 EAMRLKEKMIEKGL 856
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 165/352 (46%), Gaps = 30/352 (8%)
Query: 30 LAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKER-VGPSVFVYNLVLG 88
L V+ M+ + PDV + V A ++DK E + +V YN ++
Sbjct: 210 LHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLIN 269
Query: 89 GLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEP 148
G + V+ ++ M R + N VTY +LI GYCK G ME+A + +K
Sbjct: 270 GYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVA 329
Query: 149 SVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANV 208
Y L+ G C +G++ DA V M +
Sbjct: 330 DQHMYGVLMDGYCRTGQIRDAVRVHDNM-----------------------------IEI 360
Query: 209 AARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKA 268
R + ++L+NG+C+ G++ +A+++ +++ + + P +YN LV+ YC GYV++A
Sbjct: 361 GVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEA 420
Query: 269 IQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLING 328
++ +QM ++ + P+ +T+N L+ + G K ML++G+ + ++L+
Sbjct: 421 LKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEA 480
Query: 329 YGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDM 380
++ +F + ++ E + +G+ + I+ +I+ LCK K+ +A+ +L ++
Sbjct: 481 LFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNV 532
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 88/219 (40%), Gaps = 52/219 (23%)
Query: 211 RIDERTYSALLNGFCRVGRIEKAKEVLAKLV---ENGVVP-------------SQISYNI 254
R D + Y +++ R ++ K L +LV +G V S +++
Sbjct: 101 RPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGFVVWGELVRVFKEFSFSPTVFDM 160
Query: 255 LVNAYCHEGYVEKAIQTAEQMEERG----------------------------------- 279
++ Y +G V+ A+ + M G
Sbjct: 161 ILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFE 220
Query: 280 LKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK-GIAPTLETYNSLINGYGRISNFVKC 338
+ P T + ++N +C +G VD+A + K+ G+ + TYNSLINGY I +
Sbjct: 221 VSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGM 280
Query: 339 FEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVL 377
+L + ++G+ NV++Y SLI CK + +AE V
Sbjct: 281 TRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF 319
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 176/385 (45%), Gaps = 39/385 (10%)
Query: 3 KDGVLPSVRSVNRLFETLVGSKQFEKVLAVFT-DMVESGIRPDVVSYGKAVEAAVMLKDL 61
K G+ PS++ N + + LV + + FT M+ SGI DV +YG ++ + +
Sbjct: 140 KFGIKPSLKVFNSILDVLV-KEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRI 198
Query: 62 DKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTL 121
GF+L+ M+ V P+ VYN +L LCK +V AR L EM PN VT+N L
Sbjct: 199 GDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNIL 254
Query: 122 IDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGF 181
I YC ++ ++ L + + P V+T ++ LC+ GRV++A EVL +E G
Sbjct: 255 ISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKG- 313
Query: 182 LPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLV 241
++D + L+ G+C +G++ A+ ++
Sbjct: 314 ----------------------------GKVDVVACNTLVKGYCALGKMRVAQRFFIEME 345
Query: 242 ENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVD 301
G +P+ +YN+L+ YC G ++ A+ T M+ ++ ++ TFNTLI G D
Sbjct: 346 RKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTD 405
Query: 302 QAERWVKKMLEKGIA--PTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGS 359
+ ++ M + ++ YN +I G+ + + + E L ++EK + P +
Sbjct: 406 DGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEK--LFPRAVDRSF 463
Query: 360 LINCLCKDRKLLDAEIVLGDMASRG 384
+ LC+ + D + M G
Sbjct: 464 KLISLCEKGGMDDLKTAYDQMIGEG 488
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 169/367 (46%), Gaps = 10/367 (2%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P+ + N L ++ + + + G PDVV+ K +E + + E+
Sbjct: 246 PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEV 305
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
+ +E + V N ++ G C + +++ A++ F EM + +PN TYN LI GYC
Sbjct: 306 LERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCD 365
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGG-- 185
VG ++ A MK + T+N L+ GL GR +D ++L M+ + + G
Sbjct: 366 VGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARI 425
Query: 186 --FSRIV--FDDDSACSNGNGSL--RANVAARIDERTYSALLNGFCRVGRIEKAKEVLAK 239
++ ++ F ++ + L + R +R++ L C G ++ K +
Sbjct: 426 DPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFK--LISLCEKGGMDDLKTAYDQ 483
Query: 240 LVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGE 299
++ G VPS I + L++ Y G +E++++ M RG P TFN +I FC+ +
Sbjct: 484 MIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDK 543
Query: 300 VDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGS 359
V ++V+ M E+G P E+YN L+ + K + + + +K + P+ + S
Sbjct: 544 VMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSS 603
Query: 360 LINCLCK 366
L+ CL +
Sbjct: 604 LMFCLSQ 610
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 163/362 (45%), Gaps = 36/362 (9%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVES-GIRPDVVSYGKAVEAAVMLKDLDK 63
G + S + LF L ++F+ V + +M +S G+ PD + + + + +
Sbjct: 71 GFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKR 130
Query: 64 GFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFD-EMLHRNLVPNTVTYNTLI 122
++ + K + PS+ V+N +L L K + AR+ F +M+ + + TY L+
Sbjct: 131 VISVVDLVSKFGIKPSLKVFNSILDVLVK-EDIDIAREFFTRKMMASGIHGDVYTYGILM 189
Query: 123 DGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFL 182
G + F L MK P+ + YN LL LC +G+V AR ++ EM+
Sbjct: 190 KGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK----- 244
Query: 183 PGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVE 242
++ T++ L++ +C ++ ++ +L K
Sbjct: 245 ----------------------------EPNDVTFNILISAYCNEQKLIQSMVLLEKCFS 276
Query: 243 NGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQ 302
G VP ++ ++ C+EG V +A++ E++E +G K V NTL+ +C G++
Sbjct: 277 LGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRV 336
Query: 303 AERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLIN 362
A+R+ +M KG P +ETYN LI GY + + +++ ++ N ++ +LI
Sbjct: 337 AQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIR 396
Query: 363 CL 364
L
Sbjct: 397 GL 398
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 123/297 (41%), Gaps = 35/297 (11%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G LP+V + N L + L F DM IR + ++ + +
Sbjct: 344 MERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGR 403
Query: 61 LDKGFELMGCMEKERV--GPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTY 118
D G +++ M+ G + YN V+ G K R +DA + +M L P V
Sbjct: 404 TDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKM--EKLFPRAVDR 461
Query: 119 NTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEG 178
+ + C+ G M+ + +M PS+I +CL+ G++ ++ E++ +M
Sbjct: 462 SFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVT 521
Query: 179 NGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLA 238
G+LP T++A++ GFC+ ++ + +
Sbjct: 522 RGYLP-----------------------------RSSTFNAVIIGFCKQDKVMNGIKFVE 552
Query: 239 KLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFC 295
+ E G VP SYN L+ C +G ++KA +M E+ + P +++L+ FC
Sbjct: 553 DMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM--FC 607
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 100/198 (50%), Gaps = 7/198 (3%)
Query: 188 RIVFDDDSACSNGNGSLR--ANVAARIDER-TYSALLNGFCRVGRIEKAKEVLAKLVEN- 243
R++ D SA S + R + I R TY AL + C R + ++L ++ ++
Sbjct: 48 RLILDQKSA-SGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSI 106
Query: 244 GVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQA 303
G+ P + ++ + +++ I + + + G+KPS FN++++ + ++D A
Sbjct: 107 GLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKE-DIDIA 165
Query: 304 -ERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLIN 362
E + +KM+ GI + TY L+ G + F++L+ ++ G+ PN + Y +L++
Sbjct: 166 REFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLH 225
Query: 363 CLCKDRKLLDAEIVLGDM 380
LCK+ K+ A ++ +M
Sbjct: 226 ALCKNGKVGRARSLMSEM 243
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 168/380 (44%), Gaps = 34/380 (8%)
Query: 28 KVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVL 87
+ L F + + I D V Y A +A L +++ FEL+ M+ + P V Y ++
Sbjct: 371 EALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLI 430
Query: 88 GGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAE 147
G C +V DA L DEM+ + P+ +TYN L+ G + G E+ + RMKA +
Sbjct: 431 DGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPK 490
Query: 148 PSVITYNCLLGGLCSSGRVNDAREVLVEMEG----------NGFLPGGFSRIVFDDDSAC 197
P+ +T + ++ GLC + +V +A + +E G+ G S+ + A
Sbjct: 491 PNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAY---KAF 547
Query: 198 SNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVN 257
LR +V Y L C G +EKA +VL K+ V P + ++
Sbjct: 548 VRLEYPLRKSV--------YIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIG 599
Query: 258 AYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAP 317
A+C V +A + M ERGL P T+ +I+ +C E+ +AE + M ++GI P
Sbjct: 600 AFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKP 659
Query: 318 TLETYNSLINGYGRIS-------------NFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
+ TY L++ Y ++ K E+L E G+ +V+ Y LI+
Sbjct: 660 DVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQ 719
Query: 365 CKDRKLLDAEIVLGDMASRG 384
CK L A + M G
Sbjct: 720 CKMNNLEQAAELFDRMIDSG 739
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 164/367 (44%), Gaps = 36/367 (9%)
Query: 31 AVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGL 90
+V +M E G DV + ++ +L + + M + + + + +L+L
Sbjct: 304 SVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCY 363
Query: 91 CKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSV 150
CK+ +A + F E N+ + V YN D K+G +E+AF L MK P V
Sbjct: 364 CKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDV 423
Query: 151 ITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAA 210
I Y L+ G C G+V DA +++ EM GNG P + V A NG+ +
Sbjct: 424 INYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLA-RNGHEEEVLEIYE 482
Query: 211 RIDER-------TYSALLNGFCRVGRIEKAKEVLAKLVE----------NGVVPSQIS-- 251
R+ T S ++ G C ++++A++ + L + G + +S
Sbjct: 483 RMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKK 542
Query: 252 ----------------YNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFC 295
Y L + C EGY+EKA ++M ++P +I FC
Sbjct: 543 AYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFC 602
Query: 296 ETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVI 355
+ V +A+ M+E+G+ P L TY +I+ Y R++ K + E+++++G+KP+V+
Sbjct: 603 KLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVV 662
Query: 356 SYGSLIN 362
+Y L++
Sbjct: 663 TYTVLLD 669
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 174/372 (46%), Gaps = 34/372 (9%)
Query: 14 NRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEK 73
N F+ L + E+ + +M + GI PDV++Y ++ + + +L+ M
Sbjct: 392 NVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIG 451
Query: 74 ERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYC---KVGE 130
+ P + YN+++ GL + ++ ++++ M PN VT + +I+G C KV E
Sbjct: 452 NGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKE 511
Query: 131 MEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIV 190
E FS K P + S + G C +G A + V +E + ++
Sbjct: 512 AEDFFS-SLEQKCPENKASFVK------GYCEAGLSKKAYKAFVRLE-YPLRKSVYIKLF 563
Query: 191 FDDDSACSNG-----NGSLRANVAARID--ERTYSALLNGFCRVGRIEKAKEVLAKLVEN 243
F S C G + L+ A R++ ++ FC++ + +A+ + +VE
Sbjct: 564 F---SLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVER 620
Query: 244 GVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCE------- 296
G++P +Y I+++ YC ++KA E M++RG+KP VT+ L++++ +
Sbjct: 621 GLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHE 680
Query: 297 ----TGEV--DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGM 350
GEV +A +++ GI + Y LI+ +++N + E+ + + G+
Sbjct: 681 TCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGL 740
Query: 351 KPNVISYGSLIN 362
+P++++Y +LI+
Sbjct: 741 EPDMVAYTTLIS 752
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 156/328 (47%), Gaps = 23/328 (7%)
Query: 57 MLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTV 116
ML L K + +G E + Y +V+ LC+ +++A L E +
Sbjct: 199 MLMTLFKQLKQLGLCANE------YTYAIVVKALCRKGNLEEAAMLLIEN------ESVF 246
Query: 117 TYNTLIDGYCKVGEMEKAFSLKARM---KAPNAEPSVITYNCLLGGLCSSGRVNDAREVL 173
Y T I+G C GE EKA +L + K + ++ G C+ ++ A V+
Sbjct: 247 GYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVI 306
Query: 174 VEMEGNGFLPGGFSRIVFDDDSACSNGN-----GSLRANVAA--RIDERTYSALLNGFCR 226
+EME GF ++ + D C N N G L + +++ S +L +C+
Sbjct: 307 IEMEEIGFGLDVYACLAVID-RYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCK 365
Query: 227 VGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVT 286
+ +A E + + + ++ YN+ +A G VE+A + ++M++RG+ P +
Sbjct: 366 MDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVIN 425
Query: 287 FNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIE 346
+ TLI+ +C G+V A + +M+ G++P L TYN L++G R + + EI E ++
Sbjct: 426 YTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMK 485
Query: 347 KKGMKPNVISYGSLINCLCKDRKLLDAE 374
+G KPN ++ +I LC RK+ +AE
Sbjct: 486 AEGPKPNAVTNSVIIEGLCFARKVKEAE 513
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/381 (20%), Positives = 151/381 (39%), Gaps = 79/381 (20%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+ G++P V + L + + L + +M+ +G+ PD+++Y V
Sbjct: 414 MKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGH 473
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
++ E+ M+ E P+ ++++ GLC R+VK+A F L + N ++
Sbjct: 474 EEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSS-LEQKCPENKASF-- 530
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+ GYC+ G +KA+ R++ P + I L LC G + A +VL +M
Sbjct: 531 -VKGYCEAGLSKKAYKAFVRLEYPLRKSVYIK---LFFSLCIEGYLEKAHDVLKKMSAYR 586
Query: 181 FLPGGFSRIVFDDDSACSNGNGSL-------RANVAARI--------DERTYSALLNGFC 225
PG S C G+ A V D TY+ +++ +C
Sbjct: 587 VEPG---------RSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYC 637
Query: 226 RVGRIEKAKEVLAKLVENGVVPSQISYNILVNAY-------------------------- 259
R+ ++KA+ + + + G+ P ++Y +L++ Y
Sbjct: 638 RLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVL 697
Query: 260 ----------------------CHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCET 297
C +E+A + ++M + GL+P V + TLI+ +
Sbjct: 698 REFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRK 757
Query: 298 GEVDQAERWVKKMLEKGIAPT 318
G +D A V ++ +K P+
Sbjct: 758 GYIDMAVTLVTELSKKYNIPS 778
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 149/336 (44%), Gaps = 32/336 (9%)
Query: 49 GKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLH 108
G V+A V L D+ +++ ++ + N ++ + + ++ LF ++
Sbjct: 150 GALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQ 209
Query: 109 RNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVND 168
L N TY ++ C+ G +E+A A + N SV Y + GLC +G
Sbjct: 210 LGLCANEYTYAIVVKALCRKGNLEEA----AMLLIEN--ESVFGYKTFINGLCVTGETEK 263
Query: 169 AREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVG 228
A +++E+ +L G DD LRA ++ GFC
Sbjct: 264 AVALILELIDRKYLAG--------DD---------LRA---------VLGMVVRGFCNEM 297
Query: 229 RIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFN 288
+++ A+ V+ ++ E G + +++ YC + +A+ ++M +GLK + V +
Sbjct: 298 KMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVS 357
Query: 289 TLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKK 348
++ +C+ +A K+ + I YN + ++ + FE+L+E++ +
Sbjct: 358 LILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDR 417
Query: 349 GMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
G+ P+VI+Y +LI+ C K++DA ++ +M G
Sbjct: 418 GIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNG 453
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 194/408 (47%), Gaps = 43/408 (10%)
Query: 16 LFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKER 75
L + + S+ + K V+ ++ G + D+ +Y ++A + KD +K ++ M+K
Sbjct: 209 LLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDA--LAKD-EKACQVFEDMKKRH 265
Query: 76 VGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAF 135
+ Y +++ + ++ + +A LF+EM+ L N V YNTL+ K ++KA
Sbjct: 266 CRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAI 325
Query: 136 SLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIV----- 190
+ +RM P+ TY+ LL L + G++ V VE+ G +S +V
Sbjct: 326 QVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGV-VEISKRYMTQGIYSYLVRTLSK 384
Query: 191 ----------FDD-----------------DSACSNGNGSLRANVAARIDER-------T 216
F D +S C G + ++I E+
Sbjct: 385 LGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMM 444
Query: 217 YSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQME 276
Y+ + + ++ +I ++ K+ ++G P +YNIL+ ++ G V++AI E++E
Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELE 504
Query: 277 ERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFV 336
KP +++N+LIN + G+VD+A K+M EKG+ P + TY++L+ +G+
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVE 564
Query: 337 KCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ + EE+ KG +PN+++Y L++CL K+ + +A + M +G
Sbjct: 565 MAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQG 612
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 168/360 (46%), Gaps = 32/360 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M +G+ +V N L + L K +K + VF+ MVE+G RP+ +Y + V
Sbjct: 296 MITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQ 355
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L L G +E + + +Y+ ++ L K+ V +A +LF +M + +Y +
Sbjct: 356 L---VRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMS 412
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+++ C G+ +A + +++ + YN + L +++ ++ +M+ +G
Sbjct: 413 MLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDG 472
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P F TY+ L+ F RVG +++A + +L
Sbjct: 473 PSPDIF-----------------------------TYNILIASFGRVGEVDEAINIFEEL 503
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+ P ISYN L+N G V++A ++M+E+GL P VT++TL+ F +T V
Sbjct: 504 ERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERV 563
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
+ A ++ML KG P + TYN L++ + + ++ +++++G+ P+ I+Y L
Sbjct: 564 EMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 100/205 (48%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
+ + GV+ N +F L KQ + +F M + G PD+ +Y + + + +
Sbjct: 433 IHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGE 492
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D+ + +E+ P + YN ++ L K V +A F EM + L P+ VTY+T
Sbjct: 493 VDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYST 552
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L++ + K +E A+SL M +P+++TYN LL L +GR +A ++ +M+ G
Sbjct: 553 LMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQG 612
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLR 205
P + V + + S+G +R
Sbjct: 613 LTPDSITYTVLERLQSVSHGKSRIR 637
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 3/161 (1%)
Query: 211 RIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQ 270
+++ TY LL + R KA +V ++ G +YN+L++A + EKA Q
Sbjct: 200 KMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQ 256
Query: 271 TAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYG 330
E M++R + T+ +I G+ D+A +M+ +G+ + YN+L+
Sbjct: 257 VFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLA 316
Query: 331 RISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLL 371
+ K ++ + + G +PN +Y L+N L + +L+
Sbjct: 317 KGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLV 357
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 145/302 (48%), Gaps = 30/302 (9%)
Query: 83 YNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMK 142
YN +L L + V++ ++L+ EML + P+ T+NTL++GYCK+G + +A +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 143 APNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNG 202
+P TY + G C V+ A +V EM NG
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNG---------------------- 220
Query: 203 SLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHE 262
+E +Y+ L+ G +I++A +L K+ ++ P+ +Y +L++A C
Sbjct: 221 -------CHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGS 273
Query: 263 GYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETY 322
G +A+ +QM E G+KP + LI FC +D+A ++ MLE G+ P + TY
Sbjct: 274 GQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITY 333
Query: 323 NSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMAS 382
N+LI G+ + N K +L ++ ++ + P++I+Y +LI C L A +L M
Sbjct: 334 NALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEE 392
Query: 383 RG 384
G
Sbjct: 393 SG 394
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 147/311 (47%), Gaps = 30/311 (9%)
Query: 11 RSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGC 70
+ N L +L E++ ++T+M+E + PD+ ++ V L + + + +
Sbjct: 121 KCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTW 180
Query: 71 MEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGE 130
+ + P F Y + G C+ + V A K+F EM N V+Y LI G + +
Sbjct: 181 LIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKK 240
Query: 131 MEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIV 190
+++A SL +MK N P+V TY L+ LC SG+ ++A + +M +G P
Sbjct: 241 IDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKP------- 293
Query: 191 FDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQI 250
D+ Y+ L+ FC +++A +L ++ENG++P+ I
Sbjct: 294 ----------------------DDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVI 331
Query: 251 SYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKM 310
+YN L+ +C + V KA+ +M E+ L P +T+NTLI C +G +D A R + M
Sbjct: 332 TYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLM 390
Query: 311 LEKGIAPTLET 321
E G+ P T
Sbjct: 391 EESGLVPNQRT 401
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 129/289 (44%), Gaps = 42/289 (14%)
Query: 1 MRKDGVLPSVRSVNRLFE------TLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEA 54
M +D V P + + N L +V +KQ+ T ++++G PD +Y +
Sbjct: 146 MLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQY------VTWLIQAGCDPDYFTYTSFITG 199
Query: 55 AVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPN 114
K++D F++ M + + Y ++ GL + +++ +A L +M N PN
Sbjct: 200 HCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPN 259
Query: 115 TVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLV 174
TY LID C G+ +A +L +M +P Y L+ CS +++A +L
Sbjct: 260 VRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLE 319
Query: 175 EMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAK 234
M NG +P NV TY+AL+ GFC+ + KA
Sbjct: 320 HMLENGLMP-----------------------NVI------TYNALIKGFCK-KNVHKAM 349
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPS 283
+L+K++E +VP I+YN L+ C G ++ A + MEE GL P+
Sbjct: 350 GLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 109/249 (43%), Gaps = 16/249 (6%)
Query: 142 KAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEG------NGFLPGGFSRIVFDDDS 195
+ PN + +V +Y L+ LCS + ++ + M + F R + DS
Sbjct: 52 RIPNFKHNVTSYASLVTLLCSQEIPYEVPKITILMIKSCNSVRDALFVVDFCRTMRKGDS 111
Query: 196 ACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNIL 255
+ ++ + Y+ LL+ R G +E+ K + +++E+ V P ++N L
Sbjct: 112 F----------EIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTL 161
Query: 256 VNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGI 315
VN YC GYV +A Q + + G P Y T+ + I C EVD A + K+M + G
Sbjct: 162 VNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGC 221
Query: 316 APTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEI 375
+Y LI G + +L +++ PNV +Y LI+ LC + +A
Sbjct: 222 HRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMN 281
Query: 376 VLGDMASRG 384
+ M+ G
Sbjct: 282 LFKQMSESG 290
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 189/420 (45%), Gaps = 66/420 (15%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSY----------GK 50
M+++G+ P++ + N L LV + + VF M I+PD+V+Y G+
Sbjct: 213 MKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQ 272
Query: 51 AVEAAVMLKDLD-KGFE---------LMGCMEKERVGPSVFVY---------------NL 85
+A L+D++ +G E + C G V +Y +L
Sbjct: 273 TQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSL 332
Query: 86 VLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPN 145
V+GGLCK ++ + +F+ M+ + PN Y LIDGY K G +E A L RM
Sbjct: 333 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 392
Query: 146 AEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLR 205
+P V+TY+ ++ GLC +GRV +A + F FD
Sbjct: 393 FKPDVVTYSVVVNGLCKNGRVEEALDY-------------FHTCRFD------------- 426
Query: 206 ANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYV 265
I+ YS+L++G + GR+++A+ + ++ E G YN L++A+ V
Sbjct: 427 ---GLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKV 483
Query: 266 EKAIQTAEQM-EERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNS 324
++AI ++M EE G + T+ L++ + ++A + M++KGI PT + +
Sbjct: 484 DEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRA 543
Query: 325 LINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
L G + +IL+E+ G+ + + +IN LCK ++ +A + + RG
Sbjct: 544 LSTGLCLSGKVARACKILDELAPMGVILDA-ACEDMINTLCKAGRIKEACKLADGITERG 602
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 171/375 (45%), Gaps = 35/375 (9%)
Query: 9 SVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELM 68
+V + N L ++ E++L V+ M E+GI P + +Y + V +D +
Sbjct: 186 TVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF 245
Query: 69 GCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKV 128
ME R+ P + YN ++ G CK + + A + +M R + +TY T+I
Sbjct: 246 EVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYAD 305
Query: 129 GEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSR 188
+ +L M + ++ ++GGLC G++N+ V M G P
Sbjct: 306 SDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKP----- 360
Query: 189 IVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPS 248
NVA Y+ L++G+ + G +E A +L ++++ G P
Sbjct: 361 ------------------NVA------IYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPD 396
Query: 249 QISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVK 308
++Y+++VN C G VE+A+ GL + + +++LI+ + G VD+AER +
Sbjct: 397 VVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFE 456
Query: 309 KMLEKGIAPTLETYNSLINGYG---RISNFVKCFEILEEIEKKGMKPNVISYGSLINCLC 365
+M EKG YN+LI+ + ++ + F+ +EE E G V +Y L++ +
Sbjct: 457 EMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEE--GCDQTVYTYTILLSGMF 514
Query: 366 KDRKLLDAEIVLGDM 380
K+ + +A + L DM
Sbjct: 515 KEHRNEEA-LKLWDM 528
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 157/333 (47%), Gaps = 8/333 (2%)
Query: 48 YGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEML 107
Y V+ + KD+D+ + ++K +V N ++ K+ V++ ++ +M
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 214
Query: 108 HRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVN 167
+ P TYN L++G ++ A + M++ +P ++TYN ++ G C +G+
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 168 DAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDER-------TYSAL 220
A E L +ME G + + + GS A + +DE+ +S +
Sbjct: 275 KAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVA-LYQEMDEKGIQVPPHAFSLV 333
Query: 221 LNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGL 280
+ G C+ G++ + V ++ G P+ Y +L++ Y G VE AI+ +M + G
Sbjct: 334 IGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGF 393
Query: 281 KPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFE 340
KP VT++ ++N C+ G V++A + G+A Y+SLI+G G+ +
Sbjct: 394 KPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAER 453
Query: 341 ILEEIEKKGMKPNVISYGSLINCLCKDRKLLDA 373
+ EE+ +KG + Y +LI+ K RK+ +A
Sbjct: 454 LFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEA 486
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 91/167 (54%)
Query: 218 SALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEE 277
+AL+ F ++G +E+ V K+ ENG+ P+ +YN L+N +V+ A + E ME
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 278 RGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVK 337
+KP VT+NT+I +C+ G+ +A ++ M +G TY ++I S+F
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 310
Query: 338 CFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
C + +E+++KG++ ++ +I LCK+ KL + V +M +G
Sbjct: 311 CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKG 357
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 170/383 (44%), Gaps = 33/383 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G++P + L L + + M + G + V+Y V ML
Sbjct: 132 MVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGS 191
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L++ + + + ++ + P+ F Y+ +L K R +A KL DE++ + PN V+YN
Sbjct: 192 LNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNV 251
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L+ G+CK G + A +L + A + +V++YN LL LC GR +A +L EM+G
Sbjct: 252 LLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGD 311
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P TY+ L+N GR E+A +VL ++
Sbjct: 312 RAPSVV-----------------------------TYNILINSLAFHGRTEQALQVLKEM 342
Query: 241 VE--NGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCE-T 297
+ + + SYN ++ C EG V+ ++ ++M R KP+ T+N I CE
Sbjct: 343 SKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGSLCEHN 401
Query: 298 GEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISY 357
+V +A ++ + K T + Y S+I R N F++L E+ + G P+ +Y
Sbjct: 402 SKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTY 461
Query: 358 GSLINCLCKDRKLLDAEIVLGDM 380
+LI LC + A VL M
Sbjct: 462 SALIRGLCLEGMFTGAMEVLSIM 484
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 98/167 (58%)
Query: 218 SALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEE 277
+ LL C+ R++KA V+ +V +G++P +Y LVN C G V A+Q E+ME+
Sbjct: 110 TQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMED 169
Query: 278 RGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVK 337
G + VT+N L+ C G ++Q+ ++V+++++KG+AP TY+ L+ + +
Sbjct: 170 HGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDE 229
Query: 338 CFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
++L+EI KG +PN++SY L+ CK+ + DA + ++ ++G
Sbjct: 230 AVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKG 276
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 153/393 (38%), Gaps = 52/393 (13%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G + + N L L + L +++ G+ P+ +Y +EAA +
Sbjct: 167 MEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERG 226
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
D+ +L+ + + P++ YN++L G CK R DA LF E+ + N V+YN
Sbjct: 227 TDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNI 286
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGL-------------------- 160
L+ C G E+A SL A M + PSV+TYN L+ L
Sbjct: 287 LLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGN 346
Query: 161 -----------------CSSGRVNDAREVLVEMEGNGFLP--GGFSRIVFDDDSACSNGN 201
C G+V+ + L EM P G ++ I S C + +
Sbjct: 347 HQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAI----GSLCEHNS 402
Query: 202 GSLRA--------NVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYN 253
A N Y +++ CR G A ++L ++ G P +Y+
Sbjct: 403 KVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYS 462
Query: 254 ILVNAYCHEGYVEKAIQTAEQMEE-RGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLE 312
L+ C EG A++ MEE KP+ FN +I C+ D A + M+E
Sbjct: 463 ALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVE 522
Query: 313 KGIAPTLETYNSLINGYGRISNFVKCFEILEEI 345
K P TY L+ G E+L+E+
Sbjct: 523 KKRMPNETTYAILVEGIAHEDELELAKEVLDEL 555
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 116/250 (46%), Gaps = 29/250 (11%)
Query: 131 MEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIV 190
+ +FS + +P+V LL LC + R+ A V+ M +G +P
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIP------- 139
Query: 191 FDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQI 250
D Y+ L+N C+ G + A +++ K+ ++G + +
Sbjct: 140 ----------------------DASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTV 177
Query: 251 SYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKM 310
+YN LV C G + +++Q E++ ++GL P+ T++ L+ + D+A + + ++
Sbjct: 178 TYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEI 237
Query: 311 LEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKL 370
+ KG P L +YN L+ G+ + + E+ KG K NV+SY L+ CLC D +
Sbjct: 238 IVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRW 297
Query: 371 LDAEIVLGDM 380
+A +L +M
Sbjct: 298 EEANSLLAEM 307
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 121/319 (37%), Gaps = 81/319 (25%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSY----------GKAVEA 54
G +V S N L L ++E+ ++ +M P VV+Y G+ +A
Sbjct: 276 GFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQA 335
Query: 55 AVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPN 114
+LK++ KG + + YN V+ LCK +V K DEM++R PN
Sbjct: 336 LQVLKEMSKG--------NHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPN 387
Query: 115 TVTYN-----------------------------------TLIDGYCKVGEMEKAFSLKA 139
TYN ++I C+ G AF L
Sbjct: 388 EGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLY 447
Query: 140 RMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSN 199
M +P TY+ L+ GLC G A EVL ME +
Sbjct: 448 EMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEES-------------------- 487
Query: 200 GNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAY 259
N +D ++A++ G C++ R + A EV +VE +P++ +Y ILV
Sbjct: 488 ------ENCKPTVD--NFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGI 539
Query: 260 CHEGYVEKAIQTAEQMEER 278
HE +E A + +++ R
Sbjct: 540 AHEDELELAKEVLDELRLR 558
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 164/344 (47%), Gaps = 13/344 (3%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVE---AAVM 57
M++ G P+V + L + L + + ++ + DM+ G+ PDVV +
Sbjct: 294 MKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGR 353
Query: 58 LKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVR-RVKDARKLFDEMLHRNLVPNTV 116
+++L F MG R P+V YN V+ L + + V + FD+M ++ P+
Sbjct: 354 VEELTNVFSEMGMW---RCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEF 410
Query: 117 TYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEM 176
TY+ LIDGYCK +EKA L M P Y L+ L + R A E+ E+
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKEL 470
Query: 177 EGN-GFLPGGFSRIVFDDDSACSNGNGSL-----RANVAARIDERTYSALLNGFCRVGRI 230
+ N G + ++ C + ++ N + D Y+AL++G + G I
Sbjct: 471 KENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMI 530
Query: 231 EKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTL 290
+A +L K+ ENG S+NI++N + G +AI+ E ++ G+KP VT+NTL
Sbjct: 531 NEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTL 590
Query: 291 INKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISN 334
+ F G ++A R +++M +KG TY+S+++ G + +
Sbjct: 591 LGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDH 634
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 181/420 (43%), Gaps = 43/420 (10%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESG-IRPDVVSYGKAVEAAVMLKDLDKGFE 66
P+ + N + L+ Q EKV V+T+M G PD ++Y + + L D
Sbjct: 195 PTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIR 254
Query: 67 LMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYC 126
L M+ + P+ +Y +LG KV +V+ A LF+EM P TY LI G
Sbjct: 255 LFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLG 314
Query: 127 KVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGF 186
K G +++A+ M P V+ N L+ L GRV + V EM P
Sbjct: 315 KAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVV 374
Query: 187 S-----RIVFDDDSACSNGNGSLRANVAARID--ERTYSALLNGFCRVGRIEKAKEVLAK 239
S + +F+ + S + A + E TYS L++G+C+ R+EKA +L +
Sbjct: 375 SYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEE 434
Query: 240 LVENGVVPSQISYNILVNA-----------------------------------YCHEGY 264
+ E G P +Y L+NA + G
Sbjct: 435 MDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGK 494
Query: 265 VEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNS 324
+ +A+ +M+ +G P +N L++ + G +++A ++KM E G + ++N
Sbjct: 495 LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNI 554
Query: 325 LINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
++NG+ R + E+ E I+ G+KP+ ++Y +L+ C +A ++ +M +G
Sbjct: 555 ILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKG 614
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 173/370 (46%), Gaps = 19/370 (5%)
Query: 10 VRSVNRLFETLVG----SKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGF 65
++ +++ TL+G + EK L +F +M +G P V +Y + ++ +D+ +
Sbjct: 264 MQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAY 323
Query: 66 ELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLI--- 122
M ++ + P V N ++ L KV RV++ +F EM P V+YNT+I
Sbjct: 324 GFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKAL 383
Query: 123 -DGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGF 181
+ V E+ F +MKA + PS TY+ L+ G C + RV A +L EM+ GF
Sbjct: 384 FESKAHVSEVSSWFD---KMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGF 440
Query: 182 --LPGGFSRIV-----FDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAK 234
P + ++ A + L+ N + R Y+ ++ F + G++ +A
Sbjct: 441 PPCPAAYCSLINALGKAKRYEAANELFKELKENFG-NVSSRVYAVMIKHFGKCGKLSEAV 499
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
++ ++ G P +YN L++ G + +A +MEE G + + N ++N F
Sbjct: 500 DLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGF 559
Query: 295 CETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNV 354
TG +A + + GI P TYN+L+ + F + ++ E++ KG + +
Sbjct: 560 ARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDA 619
Query: 355 ISYGSLINCL 364
I+Y S+++ +
Sbjct: 620 ITYSSILDAV 629
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 1/179 (0%)
Query: 207 NVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVE 266
N + S L+ R + KA V + P+ +YN ++ EG E
Sbjct: 155 NTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHE 214
Query: 267 KAIQTAEQM-EERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSL 325
K + +M E P +T++ LI+ + + G D A R +M + + PT + Y +L
Sbjct: 215 KVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTL 274
Query: 326 INGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ Y ++ K ++ EE+++ G P V +Y LI L K ++ +A DM G
Sbjct: 275 LGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDG 333
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 179/390 (45%), Gaps = 38/390 (9%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVES-GIRPDVVSYGKAVEAAVMLK 59
M++ G+ PSV + N L L+ + +F +M + G+ PD ++ +
Sbjct: 164 MKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNS 223
Query: 60 DLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHR--NLVPNTVT 117
+D+ F + ME P V YN ++ GLC+ +VK A + ML + ++ PN V+
Sbjct: 224 MVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVS 283
Query: 118 YNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEME 177
Y TL+ GYC E+++A + M + +P+ +TYN L+ GL + R ++ +++L+
Sbjct: 284 YTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILI--- 340
Query: 178 GNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVL 237
GG AC T++ L+ C G ++ A +V
Sbjct: 341 ------GGNDAFTTFAPDAC------------------TFNILIKAHCDAGHLDAAMKVF 376
Query: 238 AKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGL-------KPSYVTFNTL 290
+++ + P SY++L+ C ++A ++ E+ + KP +N +
Sbjct: 377 QEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPM 436
Query: 291 INKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGM 350
C G+ QAE+ ++++++G+ +Y +LI G+ R F +E+L + ++
Sbjct: 437 FEYLCANGKTKQAEKVFRQLMKRGVQDP-PSYKTLITGHCREGKFKPAYELLVLMLRREF 495
Query: 351 KPNVISYGSLINCLCKDRKLLDAEIVLGDM 380
P++ +Y LI+ L K + L A L M
Sbjct: 496 VPDLETYELLIDGLLKIGEALLAHDTLQRM 525
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 146/329 (44%), Gaps = 37/329 (11%)
Query: 66 ELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHR-NLVPNTVTYNTLIDG 124
+L M++ + PSV +N +L L K R A LFDEM + P++ T+NTLI+G
Sbjct: 159 KLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLING 218
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
+CK +++AF + M+ + P V+TYN ++ GLC +G+V A VL
Sbjct: 219 FCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVL----------- 267
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
+G L+ + +Y+ L+ G+C I++A V ++ G
Sbjct: 268 ----------------SGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRG 311
Query: 245 VVPSQISYNILVN--AYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQ 302
+ P+ ++YN L+ + H K I P TFN LI C+ G +D
Sbjct: 312 LKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDA 371
Query: 303 AERWVKKMLEKGIAPTLETYNSLI------NGYGRISN-FVKCFEILEEIEKKGMKPNVI 355
A + ++ML + P +Y+ LI N + R F + FE + K KP
Sbjct: 372 AMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAA 431
Query: 356 SYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+Y + LC + K AE V + RG
Sbjct: 432 AYNPMFEYLCANGKTKQAEKVFRQLMKRG 460
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 131/285 (45%), Gaps = 33/285 (11%)
Query: 118 YNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEME 177
+N+LI Y G +++ L MK PSV+T+N LL L GR A ++ EM
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 178 GN-GFLPGGFSRIVFDD--DSACSNGNGSLRANVAARI-----------DERTYSALLNG 223
G P ++ F+ + C N + A RI D TY+ +++G
Sbjct: 201 RTYGVTPDSYT---FNTLINGFCKNS----MVDEAFRIFKDMELYHCNPDVVTYNTIIDG 253
Query: 224 FCRVGRIEKAKEVLAKLVENG--VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLK 281
CR G+++ A VL+ +++ V P+ +SY LV YC + +++A+ M RGLK
Sbjct: 254 LCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLK 313
Query: 282 PSYVTFNTLINKFCETGEVDQAERWVKKMLEKG------IAPTLETYNSLINGYGRISNF 335
P+ VT+NTLI E D+ +K +L G AP T+N LI + +
Sbjct: 314 PNAVTYNTLIKGLSEAHRYDE----IKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHL 369
Query: 336 VKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDM 380
++ +E+ + P+ SY LI LC + AE + ++
Sbjct: 370 DAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNEL 414
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 96/183 (52%), Gaps = 3/183 (1%)
Query: 205 RANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGY 264
R+N ++ +R +++L+ + G +++ ++ + + G+ PS +++N L++ G
Sbjct: 129 RSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGR 188
Query: 265 VEKAIQTAEQMEER-GLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYN 323
A ++M G+ P TFNTLIN FC+ VD+A R K M P + TYN
Sbjct: 189 TGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYN 248
Query: 324 SLINGYGRISNFVKCFEILEEIEKKG--MKPNVISYGSLINCLCKDRKLLDAEIVLGDMA 381
++I+G R +L + KK + PNV+SY +L+ C +++ +A +V DM
Sbjct: 249 TIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDML 308
Query: 382 SRG 384
SRG
Sbjct: 309 SRG 311
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/426 (18%), Positives = 163/426 (38%), Gaps = 52/426 (12%)
Query: 6 VLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGF 65
V P+V S L ++ ++ + VF DM+ G++P+ V+Y ++ D+
Sbjct: 277 VHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIK 336
Query: 66 ELM--GCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLID 123
+++ G P +N+++ C + A K+F EML+ L P++ +Y+ LI
Sbjct: 337 DILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIR 396
Query: 124 GYCKVGEMEKA-------FSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEM 176
C E ++A F + + +P YN + LC++G+ A +V ++
Sbjct: 397 TLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQL 456
Query: 177 EGNGFL-PGGFSRIVFDDDSACSNGNGSLRANVAARI-------DERTYSALLNGFCRVG 228
G P + ++ C G + + D TY L++G ++G
Sbjct: 457 MKRGVQDPPSYKTLI---TGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIG 513
Query: 229 RIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPS----- 283
A + L +++ + +P +++ ++ + ++ M E+ ++ +
Sbjct: 514 EALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLST 573
Query: 284 ---------------------------YVTFNTLINKFCETGEVDQAERWVKKMLEKGIA 316
V L+ CE ++ A V LEK
Sbjct: 574 QVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQM 633
Query: 317 PTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIV 376
++T N++I G + + F + E+ + G + + L N L K + + V
Sbjct: 634 VDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAAGKWEELQFV 693
Query: 377 LGDMAS 382
MA+
Sbjct: 694 SKRMAT 699
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 91/175 (52%), Gaps = 4/175 (2%)
Query: 214 ERTYSALLNGFCRVGRIEKAKEVLAKL--VENGVVPSQISY-NILVNAYCHEGYVEKAIQ 270
E+++ +L R + A+ L + NG V Q Y N L+ +Y + G +++++
Sbjct: 100 EQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVK 159
Query: 271 TAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK-GIAPTLETYNSLINGY 329
+ M++ G+ PS +TFN+L++ + G A +M G+ P T+N+LING+
Sbjct: 160 LFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGF 219
Query: 330 GRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ S + F I +++E P+V++Y ++I+ LC+ K+ A VL M +
Sbjct: 220 CKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKA 274
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 164/330 (49%), Gaps = 35/330 (10%)
Query: 35 DMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVR 94
+MVE G+ DVVSY ++ ++++ L+G M KE V P++ Y ++ GLCK+
Sbjct: 267 EMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMG 326
Query: 95 RVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYN 154
++++A LF+ +L + + Y TLIDG C+ G + +AFS+ M+ +PS++TYN
Sbjct: 327 KLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYN 386
Query: 155 CLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDE 214
++ GLC +GRV++A EV + G D
Sbjct: 387 TVINGLCMAGRVSEADEVSKGVVG----------------------------------DV 412
Query: 215 RTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQ 274
TYS LL+ + +V I+ E+ + +E + + NIL+ A+ G +A
Sbjct: 413 ITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRA 472
Query: 275 MEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISN 334
M E L P T+ T+I +C+TG++++A ++ + ++ + YN +I+ +
Sbjct: 473 MPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDALCKKGM 531
Query: 335 FVKCFEILEEIEKKGMKPNVISYGSLINCL 364
E+L E+ +KG+ ++ + +L++ +
Sbjct: 532 LDTATEVLIELWEKGLYLDIHTSRTLLHSI 561
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 182/396 (45%), Gaps = 25/396 (6%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G+ PS+ + N + L + + + D V G+ DV++Y +++ + +++
Sbjct: 373 MEQRGIQPSILTYNTVINGLCMAGRVSE-----ADEVSKGVVGDVITYSTLLDSYIKVQN 427
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D E+ + ++ + + N++L + +A L+ M +L P+T TY T
Sbjct: 428 IDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYAT 487
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+I GYCK G++E+A + ++ + +V YN ++ LC G ++ A EVL+E+ G
Sbjct: 488 MIKGYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDALCKKGMLDTATEVLIELWEKG 546
Query: 181 -FLPGGFSRIVFDDDSACSNGNGSLRANVAA-RIDERTYSALLNG----FCRVGRIEKAK 234
+L SR + A G L +++ +LN C+ G E A
Sbjct: 547 LYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAI 606
Query: 235 EVLAKLVENGVV---PSQISYNILVNAYCHEGY---VEKAIQTAEQMEERGLKPSYVTFN 288
EV + G+ PS I ++ N + Y V T M+ + +
Sbjct: 607 EVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMD-------VIDYT 659
Query: 289 TLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKK 348
+IN C+ G + +A +G+ TYNSLING + V+ + + +E
Sbjct: 660 IIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENI 719
Query: 349 GMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
G+ P+ ++YG LI+ LCK+ LDAE +L M S+G
Sbjct: 720 GLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKG 755
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 174/402 (43%), Gaps = 41/402 (10%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
GV+ V + + L ++ + + + VL + +E+ I D+V ++A +++ +
Sbjct: 407 GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEA 466
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
L M + + P Y ++ G CK ++++A ++F+E L ++ V V YN +ID
Sbjct: 467 DALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNE-LRKSSVSAAVCYNRIIDA 525
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLL------GG------------------- 159
CK G ++ A + + + T LL GG
Sbjct: 526 LCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVC 585
Query: 160 ----------LCSSGRVNDAREVLVEMEGNGF---LPGGFSRIVFDDDSACSNGNGSLRA 206
LC G A EV + M G P + + D+ + + A
Sbjct: 586 LGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNA 645
Query: 207 --NVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGY 264
+ +D Y+ ++NG C+ G + KA + + GV + I+YN L+N C +G
Sbjct: 646 GETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGC 705
Query: 265 VEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNS 324
+ +A++ + +E GL PS VT+ LI+ C+ G AE+ + M+ KG+ P + YNS
Sbjct: 706 LVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNS 765
Query: 325 LINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCK 366
+++GY ++ ++ + P+ + S+I CK
Sbjct: 766 IVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCK 807
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 190/415 (45%), Gaps = 70/415 (16%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPD-----VVSYG------ 49
+ K G P++ S++R L ++F +L ++ + I + +VS+
Sbjct: 17 LLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYSIVSWAFLNLNR 76
Query: 50 ----------KAVEAAV-----MLKDLDKGFE------------LMGCMEKERVGPSVFV 82
+A++ ML L GF L C+ PS
Sbjct: 77 YEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLT 136
Query: 83 YNLVLGGLCKVRRVKDARKLFDEMLHRNL-VP-NTVTYNTLIDGYCKVGEMEKAFSL-KA 139
+ ++ + + +A ++ + M ++N+ P + + +I G+CK+G+ E A ++
Sbjct: 137 FCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFES 196
Query: 140 RMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSN 199
+ + P+++TY L+ LC G+V++ R+++ +E GF
Sbjct: 197 AVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGF------------------ 238
Query: 200 GNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAY 259
D YS ++G+ + G + A ++VE G+ +SY+IL++
Sbjct: 239 -----------EFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGL 287
Query: 260 CHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTL 319
EG VE+A+ +M + G++P+ +T+ +I C+ G++++A ++L GI
Sbjct: 288 SKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDE 347
Query: 320 ETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAE 374
Y +LI+G R N + F +L ++E++G++P++++Y ++IN LC ++ +A+
Sbjct: 348 FLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEAD 402
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 163/390 (41%), Gaps = 41/390 (10%)
Query: 31 AVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGL 90
A++ M E + PD +Y ++ +++ E+ + K V +V YN ++ L
Sbjct: 468 ALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDAL 526
Query: 91 CKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSV 150
CK + A ++ E+ + L + T TL+ G + L ++ N++ +
Sbjct: 527 CKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCL 586
Query: 151 ITYNCLLGGLCSSGRVNDAREVLVEMEGNGF---LPGGFSRIVFDD-------------- 193
N + LC G A EV + M G P + + D+
Sbjct: 587 GMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAG 646
Query: 194 ----------------DSACSNGNGSLRANVAARIDER-------TYSALLNGFCRVGRI 230
+ C G N+ + R TY++L+NG C+ G +
Sbjct: 647 ETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCL 706
Query: 231 EKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTL 290
+A + L G+VPS+++Y IL++ C EG A + + M +GL P+ + +N++
Sbjct: 707 VEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSI 766
Query: 291 INKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGM 350
++ +C+ G+ + A R V + + + P T +S+I GY + + + + E + K +
Sbjct: 767 VDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNI 826
Query: 351 KPNVISYGSLINCLCKDRKLLDAEIVLGDM 380
+ + LI C ++ +A +L +M
Sbjct: 827 SADFFGFLFLIKGFCTKGRMEEARGLLREM 856
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 174/362 (48%), Gaps = 14/362 (3%)
Query: 36 MVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRR 95
+++SG P + S + + L+ + + ++ +++ + +Y++V + R
Sbjct: 17 LLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYSIVSWAFLNLNR 76
Query: 96 VKDARKLFDEMLHR-NLVPNTVTYNTLIDGYCKVGE--MEKAFSLKARMKAPNAEPSVIT 152
+DA K + + + ++ P T ++LI G+ + + L+ ++ A PS +T
Sbjct: 77 YEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLT 136
Query: 153 YNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDD--DSACSNGN-----GSLR 205
+ L+ G +++A EVL EM N + F V C G G
Sbjct: 137 FCSLIYRFVEKGEMDNAIEVL-EMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFE 195
Query: 206 ANVAARI---DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHE 262
+ V + + + TY+ L++ C++G++++ ++++ +L + G + Y+ ++ Y
Sbjct: 196 SAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKG 255
Query: 263 GYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETY 322
G + A+ +M E+G+ V+++ LI+ + G V++A + KM+++G+ P L TY
Sbjct: 256 GALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITY 315
Query: 323 NSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMAS 382
++I G ++ + F + I G++ + Y +LI+ +C+ L A +LGDM
Sbjct: 316 TAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQ 375
Query: 383 RG 384
RG
Sbjct: 376 RG 377
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 162/390 (41%), Gaps = 73/390 (18%)
Query: 25 QFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVM--LKDLDKGFELMGCMEKERVGPSVFV 82
FE + V+ M G+ V++ + ++ L+ LD ++ E V
Sbjct: 601 SFEAAIEVYMIMRRKGL---TVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVID 657
Query: 83 YNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMK 142
Y +++ GLCK + A L R + NT+TYN+LI+G C+ G + +A L ++
Sbjct: 658 YTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLE 717
Query: 143 APNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNG 202
PS +TY L+ LC G DA ++L M G +P
Sbjct: 718 NIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVP------------------- 758
Query: 203 SLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHE 262
N+ Y+++++G+C++G+ E A V+++ + V P + + ++ YC +
Sbjct: 759 ----NII------IYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKK 808
Query: 263 GYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKML----------- 311
G +E+A+ + +++ + + F LI FC G +++A +++ML
Sbjct: 809 GDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINR 868
Query: 312 -------------------EKGIAP----TLETYNSLINGYGRISNFVKCFEIL-----E 343
E+G P L+ +S I G+ + + L E
Sbjct: 869 VDAELAESESIRGFLVELCEQGRVPQAIKILDEISSTIYPSGKNLGSYQRLQFLNDVNEE 928
Query: 344 EIEKKGMKPNVISYGSLINCLCKDRKLLDA 373
EI+KK + S S ++ LC KL A
Sbjct: 929 EIKKKDYVHDFHSLHSTVSSLCTSGKLEQA 958
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 132/290 (45%), Gaps = 26/290 (8%)
Query: 40 GIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDA 99
G+ + ++Y + L + L +E + PS Y +++ LCK DA
Sbjct: 685 GVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDA 744
Query: 100 RKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGG 159
KL D M+ + LVPN + YN+++DGYCK+G+ E A + +R P T + ++ G
Sbjct: 745 EKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKG 804
Query: 160 LCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNG-----NGSLRANVAA---- 210
C G + +A V E + + F +F C+ G G LR + +
Sbjct: 805 YCKKGDMEEALSVFTEFKDKN-ISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVV 863
Query: 211 ----RID-ERTYSALLNGF----CRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCH 261
R+D E S + GF C GR+ +A ++L + + + + PS + + +Y
Sbjct: 864 KLINRVDAELAESESIRGFLVELCEQGRVPQAIKILDE-ISSTIYPSGKN----LGSYQR 918
Query: 262 EGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKML 311
++ E+++++ + + ++ ++ C +G+++QA +V +L
Sbjct: 919 LQFLNDV--NEEEIKKKDYVHDFHSLHSTVSSLCTSGKLEQANEFVMSVL 966
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 139/314 (44%), Gaps = 32/314 (10%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G+ V S + L + L E+ L + M++ G+ P++++Y + +
Sbjct: 268 MVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGK 327
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L++ F L + + F+Y ++ G+C+ + A + +M R + P+ +TYNT
Sbjct: 328 LEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNT 387
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDARE--------- 171
+I+G C G + +A + + VITY+ LL ++ E
Sbjct: 388 VINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAK 442
Query: 172 -----VLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARI--DERTYSALLNGF 224
V+ + FL G A + RA + D TY+ ++ G+
Sbjct: 443 IPMDLVMCNILLKAFLLMG----------AYGEADALYRAMPEMDLTPDTATYATMIKGY 492
Query: 225 CRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSY 284
C+ G+IE+A E+ +L ++ V + + YN +++A C +G ++ A + ++ E+GL
Sbjct: 493 CKTGQIEEALEMFNELRKSS-VSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDI 551
Query: 285 VTFNTLINKFCETG 298
T TL++ G
Sbjct: 552 HTSRTLLHSIHANG 565
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 104/252 (41%), Gaps = 20/252 (7%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G++PS + L + L F + MV G+ P+++ Y V+ L +
Sbjct: 720 GLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDA 779
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
++ RV P F + ++ G CK +++A +F E +N+ + + LI G
Sbjct: 780 MRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKG 839
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVI-----------TYNCLLGGLCSSGRVNDAREVL 173
+C G ME+A L M + +I + L LC GRV A ++L
Sbjct: 840 FCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQGRVPQAIKIL 899
Query: 174 VEMEG----NGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGR 229
E+ +G G + R+ F +D N + + D + + ++ C G+
Sbjct: 900 DEISSTIYPSGKNLGSYQRLQFLND---VNEEEIKKKDYVH--DFHSLHSTVSSLCTSGK 954
Query: 230 IEKAKEVLAKLV 241
+E+A E + ++
Sbjct: 955 LEQANEFVMSVL 966
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 170/370 (45%), Gaps = 27/370 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLV-GSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLK 59
M+ + + PS+ + N + G +E +L +F +M GI+PD+V+Y + A +
Sbjct: 202 MKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRG 261
Query: 60 DLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYN 119
D+ + M + P + Y+ ++ K+RR++ L EM +P+ +YN
Sbjct: 262 LGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYN 321
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN 179
L++ Y K G +++A + +M+A P+ TY+ LL SGR +D R++ +EM+ +
Sbjct: 322 VLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSS 381
Query: 180 GFLPGGFSRIVFDDDSACSN------GNGSLRANVAARI----------DERTYSALLNG 223
D D+A N G G V D TY ++
Sbjct: 382 N----------TDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFA 431
Query: 224 FCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPS 283
+ G E A+++L + N +VPS +Y ++ A+ E+A+ M E G PS
Sbjct: 432 CGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPS 491
Query: 284 YVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILE 343
TF++L+ F G V ++E + ++++ GI +T+N+ I Y + F + +
Sbjct: 492 IETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYV 551
Query: 344 EIEKKGMKPN 353
++EK P+
Sbjct: 552 DMEKSRCDPD 561
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 163/351 (46%), Gaps = 6/351 (1%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G++P + + + L ET ++ EKV + +M G PD+ SY +EA
Sbjct: 273 MNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGS 332
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ + + M+ P+ Y+++L + R D R+LF EM N P+ TYN
Sbjct: 333 IKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNI 392
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI+ + + G ++ +L M N EP + TY ++ G DAR++L M N
Sbjct: 393 LIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAND 452
Query: 181 FLPG--GFSRIVFDDDSACSNGNGSLRANVAARIDE----RTYSALLNGFCRVGRIEKAK 234
+P ++ ++ A + N + T+ +LL F R G +++++
Sbjct: 453 IVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESE 512
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
+L++LV++G+ ++ ++N + AY G E+A++T ME+ P T +++ +
Sbjct: 513 AILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVY 572
Query: 295 CETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEI 345
VD+ ++M I P++ Y ++ YG+ + E+LEE+
Sbjct: 573 SFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEM 623
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 162/369 (43%), Gaps = 31/369 (8%)
Query: 16 LFETLVGSKQFEKVLAVFTDMVES-GIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKE 74
+F+ G +++ L +F M +P+ Y + LDK E+ M +
Sbjct: 111 VFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQ 170
Query: 75 RVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVG-EMEK 133
V SVF Y ++ + R + + +L D M + + P+ +TYNT+I+ + G + E
Sbjct: 171 GVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEG 230
Query: 134 AFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDD 193
L A M+ +P ++TYN LL G ++A V M G +P
Sbjct: 231 LLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVP---------- 280
Query: 194 DSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYN 253
D TYS L+ F ++ R+EK ++L ++ G +P SYN
Sbjct: 281 -------------------DLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYN 321
Query: 254 ILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK 313
+L+ AY G +++A+ QM+ G P+ T++ L+N F ++G D + +M
Sbjct: 322 VLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSS 381
Query: 314 GIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDA 373
P TYN LI +G F + + ++ ++ ++P++ +Y +I K DA
Sbjct: 382 NTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDA 441
Query: 374 EIVLGDMAS 382
+L M +
Sbjct: 442 RKILQYMTA 450
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 164/386 (42%), Gaps = 32/386 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEA-AVMLK 59
M GV SV S L + ++E L + M I P +++Y + A A
Sbjct: 167 MPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGL 226
Query: 60 DLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKD-ARKLFDEMLHRNLVPNTVTY 118
D + L M E + P + YN +L C +R + D A +F M +VP+ TY
Sbjct: 227 DWEGLLGLFAEMRHEGIQPDIVTYNTLLSA-CAIRGLGDEAEMVFRTMNDGGIVPDLTTY 285
Query: 119 NTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEG 178
+ L++ + K+ +EK L M + + P + +YN LL SG + +A V +M+
Sbjct: 286 SHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQA 345
Query: 179 NGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLA 238
G P N N TYS LLN F + GR + +++
Sbjct: 346 AGCTP---------------NAN--------------TYSVLLNLFGQSGRYDDVRQLFL 376
Query: 239 KLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETG 298
++ + P +YNIL+ + GY ++ + M E ++P T+ +I + G
Sbjct: 377 EMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGG 436
Query: 299 EVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYG 358
+ A + ++ M I P+ + Y +I +G+ + + + + + G P++ ++
Sbjct: 437 LHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFH 496
Query: 359 SLINCLCKDRKLLDAEIVLGDMASRG 384
SL+ + + ++E +L + G
Sbjct: 497 SLLYSFARGGLVKESEAILSRLVDSG 522
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 21/192 (10%)
Query: 204 LRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEG 263
++ + + +E Y+ +++ R G ++K EV ++ GV S SY L+NAY G
Sbjct: 131 MQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNG 190
Query: 264 YVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERW------VKKMLEKGIAP 317
E +++ ++M+ + PS +T+NT+IN C G +D W +M +GI P
Sbjct: 191 RYETSLELLDRMKNEKISPSILTYNTVINA-CARGGLD----WEGLLGLFAEMRHEGIQP 245
Query: 318 TLETYNSL-----INGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLD 372
+ TYN+L I G G + V + G+ P++ +Y L+ K R+L
Sbjct: 246 DIVTYNTLLSACAIRGLGDEAEMV-----FRTMNDGGIVPDLTTYSHLVETFGKLRRLEK 300
Query: 373 AEIVLGDMASRG 384
+LG+MAS G
Sbjct: 301 VCDLLGEMASGG 312
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 134/369 (36%), Gaps = 50/369 (13%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSY-------GKA-- 51
M+ P + N L E F++V+ +F DMVE I PD+ +Y GK
Sbjct: 378 MKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGL 437
Query: 52 --------------------------VEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNL 85
+EA ++ M + PS+ ++
Sbjct: 438 HEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHS 497
Query: 86 VLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPN 145
+L + VK++ + ++ + N T+N I+ Y + G+ E+A M+
Sbjct: 498 LLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSR 557
Query: 146 AEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSR----IVFDDDSACSNGN 201
+P T +L + V++ RE EM+ + LP V+ + N
Sbjct: 558 CDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVN 617
Query: 202 GSLRANVAARID--ERTYSALLNG-FCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNA 258
L ++ R+ + ++ G + + + VL KL G YN L++A
Sbjct: 618 ELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDA 677
Query: 259 YCHEGYVEKAIQTAEQMEERGLKPSYVTFNTL-----INKFCETGEVDQAERW---VKKM 310
G E+A + + +RGL P N L +++ E G W + M
Sbjct: 678 LWWLGQKERAARVLNEATKRGLFPELFRKNKLVWSVDVHRMSEGGMYTALSVWLNDINDM 737
Query: 311 LEKGIAPTL 319
L KG P L
Sbjct: 738 LLKGDLPQL 746
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 180/421 (42%), Gaps = 41/421 (9%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G+ PS R N + + LV S + F M G +PD +Y + +D+
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
L+ ME+E P+VF Y +++ G RV +A K + M R L PN T T + G
Sbjct: 235 IRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHG 294
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP- 183
+ KAF + ++ + Y+ +L L ++ + + L ++ G++P
Sbjct: 295 IFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPD 354
Query: 184 -----GGFSRIVFDDD--SACSNGNGSLRANV----------------AARIDE------ 214
S ++ D C +G + V A R E
Sbjct: 355 SSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLK 414
Query: 215 -----------RTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEG 263
+Y+A+++ C+ RIE A L ++ + G+ P+ +++N ++ Y G
Sbjct: 415 QMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRG 474
Query: 264 YVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYN 323
V+K E++ G KP +TF+ +IN C E+ A K+MLE GI P TYN
Sbjct: 475 DVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYN 534
Query: 324 SLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
LI + + ++ ++++ G+ P++ +Y + I CK RK+ AE +L M
Sbjct: 535 ILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRI 594
Query: 384 G 384
G
Sbjct: 595 G 595
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 164/364 (45%), Gaps = 16/364 (4%)
Query: 32 VFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLC 91
VF + G++P Y ++A V LD + M + P F YN+++ G+C
Sbjct: 167 VFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVC 226
Query: 92 KVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVI 151
K V +A +L +M PN TY LIDG+ G +++A M+ P+
Sbjct: 227 KKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEA 286
Query: 152 TYNCLLGGLCSSGRVNDAREVLVEMEGNGFL--PGGFSRIVFDDDSACSNGN------GS 203
T + G+ A EVLV GF+ R+ +D C + N G
Sbjct: 287 TIRTFVHGIFRCLPPCKAFEVLV-----GFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQ 341
Query: 204 LRANVAAR---IDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYC 260
+ R D T++A ++ + + + + V GV P Y +LV A
Sbjct: 342 FLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALL 401
Query: 261 HEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLE 320
+ + + +QM GL S ++N +I+ C+ ++ A ++ +M ++GI+P L
Sbjct: 402 NAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLV 461
Query: 321 TYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDM 380
T+N+ ++GY + K +LE++ G KP+VI++ +INCLC+ +++ DA +M
Sbjct: 462 TFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEM 521
Query: 381 ASRG 384
G
Sbjct: 522 LEWG 525
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 138/316 (43%), Gaps = 29/316 (9%)
Query: 38 ESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVK 97
E G PD ++ A+ + DL + + V P Y +++ L +R
Sbjct: 348 ERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFS 407
Query: 98 DARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLL 157
+ + +M L+ + +YN +ID CK +E A M+ P+++T+N L
Sbjct: 408 EGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFL 467
Query: 158 GGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTY 217
G G V VL ++ +GF P D T+
Sbjct: 468 SGYSVRGDVKKVHGVLEKLLVHGFKP-----------------------------DVITF 498
Query: 218 SALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEE 277
S ++N CR I+ A + +++E G+ P++I+YNIL+ + C G +++++ +M+E
Sbjct: 499 SLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKE 558
Query: 278 RGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVK 337
GL P +N I FC+ +V +AE +K ML G+ P TY++LI +
Sbjct: 559 NGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESE 618
Query: 338 CFEILEEIEKKGMKPN 353
E+ IE+ G P+
Sbjct: 619 AREMFSSIERHGCVPD 634
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 134/289 (46%), Gaps = 8/289 (2%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G +P + N L+ + +F V G++P Y V+A + + +G
Sbjct: 350 GYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEG 409
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
+ M + + SV+ YN V+ LCK RR+++A EM R + PN VT+NT + G
Sbjct: 410 DRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSG 469
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
Y G+++K + ++ +P VIT++ ++ LC + + DA + EM G P
Sbjct: 470 YSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPN 529
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDER-------TYSALLNGFCRVGRIEKAKEVL 237
+ + S CS G+ + A++ E Y+A + FC++ +++KA+E+L
Sbjct: 530 EITYNILIR-SCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELL 588
Query: 238 AKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVT 286
++ G+ P +Y+ L+ A G +A + +E G P T
Sbjct: 589 KTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYT 637
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 187/431 (43%), Gaps = 53/431 (12%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVM--- 57
MR DG P + N L + ++ + + M + G RP+V +Y ++ ++
Sbjct: 206 MRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGR 265
Query: 58 ----LKDLD----------------------------KGFE-LMGCMEK----ERVGPSV 80
LK L+ K FE L+G MEK +RVG
Sbjct: 266 VDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVG--- 322
Query: 81 FVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKAR 140
Y+ VL L K+ + ++ R +P++ T+N + K ++ + +
Sbjct: 323 --YDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDG 380
Query: 141 MKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNG 200
+ +P Y L+ L ++ R ++ L +M +G L +S D C
Sbjct: 381 FVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVID-CLCKAR 439
Query: 201 NGSLRANVAARIDER-------TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYN 253
A + +R T++ L+G+ G ++K VL KL+ +G P I+++
Sbjct: 440 RIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFS 499
Query: 254 ILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK 313
+++N C ++ A ++M E G++P+ +T+N LI C TG+ D++ + KM E
Sbjct: 500 LIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKEN 559
Query: 314 GIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDA 373
G++P L YN+ I + ++ K E+L+ + + G+KP+ +Y +LI L + + +A
Sbjct: 560 GLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEA 619
Query: 374 EIVLGDMASRG 384
+ + G
Sbjct: 620 REMFSSIERHG 630
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 111/247 (44%), Gaps = 35/247 (14%)
Query: 4 DGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDK 63
DG+L SV S N + + L +++ E T+M + GI P++V++ + + D+ K
Sbjct: 419 DGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKK 478
Query: 64 GFELMGCMEKERVG---PSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ G +EK V P V ++L++ LC+ + +KDA F EML + PN +TYN
Sbjct: 479 ---VHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNI 535
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI C G+ +++ L A+MK P + YN + C +V A E+L M G
Sbjct: 536 LIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIG 595
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P F TYS L+ GR +A+E+ + +
Sbjct: 596 LKPDNF-----------------------------TYSTLIKALSESGRESEAREMFSSI 626
Query: 241 VENGVVP 247
+G VP
Sbjct: 627 ERHGCVP 633
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
Query: 211 RIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQ 270
RI + L+ + R+G + +V A++ G+ PS YN +++A ++ A
Sbjct: 142 RISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYL 201
Query: 271 TAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGY- 329
+QM G KP T+N LI+ C+ G VD+A R VK+M ++G P + TY LI+G+
Sbjct: 202 KFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFL 261
Query: 330 --GRISNFVKCFEIL 342
GR+ +K E++
Sbjct: 262 IAGRVDEALKQLEMM 276
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 74/150 (49%)
Query: 213 DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTA 272
D+ S L N R G + + E+L ++ ++G S +L+ ++ G +
Sbjct: 109 DQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVF 168
Query: 273 EQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRI 332
Q+ G+KPS +N +I+ ++ +D A ++M G P TYN LI+G +
Sbjct: 169 AQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKK 228
Query: 333 SNFVKCFEILEEIEKKGMKPNVISYGSLIN 362
+ +++++E++G +PNV +Y LI+
Sbjct: 229 GVVDEAIRLVKQMEQEGNRPNVFTYTILID 258
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 171/382 (44%), Gaps = 44/382 (11%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P+V + + +T S + + L F M + P+VV++ ++ DL+ L
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
M + R+ +V Y ++ G CK ++ A +++ M+ + PN++ Y T+IDG+ +
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
G+ + A A+M + Y ++ GLC +G++ +A E++ +ME + +P
Sbjct: 281 RGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVP---- 336
Query: 188 RIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVP 247
D ++ ++N + + GR++ A + KL+E G P
Sbjct: 337 -------------------------DMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEP 371
Query: 248 SQISYNILV-----NAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQ 302
++ + ++ N HE V I+ A V + LI+ C+ G+ +
Sbjct: 372 DVVALSTMIDGIAKNGQLHEAIVYFCIEKAND----------VMYTVLIDALCKEGDFIE 421
Query: 303 AERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLIN 362
ER K+ E G+ P Y S I G + N V F++ + ++G+ ++++Y +LI
Sbjct: 422 VERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIY 481
Query: 363 CLCKDRKLLDAEIVLGDMASRG 384
L +++A V +M + G
Sbjct: 482 GLASKGLMVEARQVFDEMLNSG 503
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/410 (21%), Positives = 177/410 (43%), Gaps = 66/410 (16%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
+RK LP + N+ L+ S L +V G P S+ V L
Sbjct: 12 LRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQ 71
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDAR-------------------- 100
+ +++ M + P V YN ++ G C+ ++ A
Sbjct: 72 VKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVS 131
Query: 101 -----------KLFDE------MLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKA 143
K+ DE ++ + PN VTY+T ID +CK GE++ A MK
Sbjct: 132 FNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKR 191
Query: 144 PNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGS 203
P+V+T+ CL+ G C +G + A + EM
Sbjct: 192 DALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMR-------------------------- 225
Query: 204 LRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEG 263
V ++ TY+AL++GFC+ G +++A+E+ +++VE+ V P+ + Y +++ + G
Sbjct: 226 ---RVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRG 282
Query: 264 YVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYN 323
+ A++ +M +G++ + +I+ C G++ +A V+ M + + P + +
Sbjct: 283 DSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFT 342
Query: 324 SLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDA 373
+++N Y + + ++ ++G +P+V++ ++I+ + K+ +L +A
Sbjct: 343 TMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA 392
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 147/294 (50%), Gaps = 20/294 (6%)
Query: 101 KLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGL 160
K ++ R P+ ++N+++ CK+G+++ A + M EP VI+YN L+ G
Sbjct: 42 KFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGH 101
Query: 161 CSSGRVNDAREVLVEMEG-NGF-----------LPGGFSRIVFDDDSACSNGN--GSLRA 206
C +G + A VL + +GF L GFS++ D+ G
Sbjct: 102 CRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSP 161
Query: 207 NVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVE 266
NV TYS ++ FC+ G ++ A + + + + P+ +++ L++ YC G +E
Sbjct: 162 NVV------TYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLE 215
Query: 267 KAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLI 326
A+ ++M + + VT+ LI+ FC+ GE+ +AE +M+E + P Y ++I
Sbjct: 216 VAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTII 275
Query: 327 NGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDM 380
+G+ + + + L ++ +GM+ ++ +YG +I+ LC + KL +A ++ DM
Sbjct: 276 DGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDM 329
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/350 (19%), Positives = 160/350 (45%), Gaps = 34/350 (9%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
MR+ + +V + L + + ++ +++ MVE + P+ + Y ++ D
Sbjct: 224 MRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGD 283
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
D + + M + + + Y +++ GLC ++K+A ++ ++M +LVP+ V + T
Sbjct: 284 SDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTT 343
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+++ Y K G M+ A ++ ++ EP V+ + ++ G+ +G++++A
Sbjct: 344 MMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA----------- 392
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
IV+ + ++ Y+ L++ C+ G + + + +K+
Sbjct: 393 --------IVY---------------FCIEKANDVMYTVLIDALCKEGDFIEVERLFSKI 429
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
E G+VP + Y + C +G + A + +M + GL + + TLI G +
Sbjct: 430 SEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLM 489
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGM 350
+A + +ML GI+P ++ LI Y + N ++L +++++G+
Sbjct: 490 VEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 76/154 (49%), Gaps = 3/154 (1%)
Query: 230 IEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNT 289
+ +A + L++L ++ +P + N ++ + +++ + RG P +FN+
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 290 LINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKG 349
+++ C+ G+V AE V M G P + +YNSLI+G+ R + +LE +
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 350 ---MKPNVISYGSLINCLCKDRKLLDAEIVLGDM 380
KP+++S+ SL N K + L + + +G M
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVM 155
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 65/140 (46%)
Query: 16 LFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKER 75
L + L F +V +F+ + E+G+ PD Y + +L F+L M +E
Sbjct: 409 LIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEG 468
Query: 76 VGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAF 135
+ + Y ++ GL + +AR++FDEML+ + P++ ++ LI Y K G M A
Sbjct: 469 LLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAAS 528
Query: 136 SLKARMKAPNAEPSVITYNC 155
L M+ +V +C
Sbjct: 529 DLLLDMQRRGLVTAVSDADC 548
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 92/231 (39%), Gaps = 35/231 (15%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEA------ 54
M K ++P + + S + + + ++ ++E G PDVV+ ++
Sbjct: 329 MEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQ 388
Query: 55 ---AVMLKDLDKGFELM------------GCMEKERVG---------PSVFVYNLVLGGL 90
A++ ++K ++M +E ER+ P F+Y + GL
Sbjct: 389 LHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGL 448
Query: 91 CKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSV 150
CK + DA KL M+ L+ + + Y TLI G G M +A + M P
Sbjct: 449 CKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDS 508
Query: 151 ITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGN 201
++ L+ G + A ++L++M+ G + V D D + GN
Sbjct: 509 AVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTA-----VSDADCSKQCGN 554
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 185/424 (43%), Gaps = 47/424 (11%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G P + N L + + + + L+V +M E+ D V+Y + V A V +
Sbjct: 311 GYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEA 370
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
++ M K+ V P+ Y V+ K + +A KLF M VPNT TYN ++
Sbjct: 371 AGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSL 430
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP- 183
K + + MK+ P+ T+N +L + G V EM+ GF P
Sbjct: 431 LGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPD 490
Query: 184 --------GGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKE 235
+ R + D++ G + RA A + TY+ALLN R G +
Sbjct: 491 RDTFNTLISAYGRCGSEVDASKMYGEMT-RAGFNACVT--TYNALLNALARKGDWRSGEN 547
Query: 236 VLAKLVENGVVPSQISYNILVNAYCHEG-------------------------------Y 264
V++ + G P++ SY++++ Y G +
Sbjct: 548 VISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANF 607
Query: 265 VEKAIQTAEQ----MEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLE 320
+A+ +E+ ++ G KP V FN++++ F DQAE ++ + E G++P L
Sbjct: 608 KCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLV 667
Query: 321 TYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDM 380
TYNSL++ Y R K EIL+ +EK +KP+++SY ++I C+ + +A +L +M
Sbjct: 668 TYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEM 727
Query: 381 ASRG 384
RG
Sbjct: 728 TERG 731
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 185/415 (44%), Gaps = 43/415 (10%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K GV+P+ + + + + + ++ L +F M E+G P+ +Y +
Sbjct: 377 MTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSR 436
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRV-KDARKLFDEMLHRNLVPNTVTYN 119
++ +++ M+ P+ +N +L LC + + K ++F EM P+ T+N
Sbjct: 437 SNEMIKMLCDMKSNGCSPNRATWNTMLA-LCGNKGMDKFVNRVFREMKSCGFEPDRDTFN 495
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN 179
TLI Y + G A + M V TYN LL L G V+ +M+
Sbjct: 496 TLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSK 555
Query: 180 GFLPG------------------GFSRI--------VFDD----------DSACSNGNGS 203
GF P G RI +F + C GS
Sbjct: 556 GFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGS 615
Query: 204 LRANV-----AARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNA 258
RA + D ++++L+ F R ++A+ +L + E+G+ P ++YN L++
Sbjct: 616 ERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDM 675
Query: 259 YCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPT 318
Y G KA + + +E+ LKP V++NT+I FC G + +A R + +M E+GI P
Sbjct: 676 YVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPC 735
Query: 319 LETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDA 373
+ TYN+ ++GY + F + +++E + K +PN +++ +++ C+ K +A
Sbjct: 736 IFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 790
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 167/380 (43%), Gaps = 32/380 (8%)
Query: 7 LPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEA-AVMLKDLDKGF 65
L VR+ + + ++EK + +F M E G P +V+Y ++ M + K
Sbjct: 207 LLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKIL 266
Query: 66 ELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGY 125
++ M + + F + VL + +++A++ F E+ P TVTYN L+ +
Sbjct: 267 GVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVF 326
Query: 126 CKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGG 185
K G +A S+ M+ + +TYN L+ +G +A V+ M G +P
Sbjct: 327 GKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNA 386
Query: 186 FSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGV 245
TY+ +++ + + G+ ++A ++ + E G
Sbjct: 387 I-----------------------------TYTTVIDAYGKAGKEDEALKLFYSMKEAGC 417
Query: 246 VPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQ-AE 304
VP+ +YN +++ + + I+ M+ G P+ T+NT++ C +D+
Sbjct: 418 VPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVN 476
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
R ++M G P +T+N+LI+ YGR + V ++ E+ + G V +Y +L+N L
Sbjct: 477 RVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNAL 536
Query: 365 CKDRKLLDAEIVLGDMASRG 384
+ E V+ DM S+G
Sbjct: 537 ARKGDWRSGENVISDMKSKG 556
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 171/358 (47%), Gaps = 30/358 (8%)
Query: 30 LAVFTDMVESGI-RPDVVSYGKAVEAAVMLKDLDKGFELM------GCMEKERVGPSVFV 82
L+ F D V+S + R D+VS K ++ + + FE + G ++ + +FV
Sbjct: 123 LSRFFDSVKSELLRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFV 182
Query: 83 YNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMK 142
+LG + + A KL D++ + + + Y T++ Y + G+ EKA L RMK
Sbjct: 183 R--ILG---RESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMK 237
Query: 143 APNAEPSVITYNCLLGGLCSSGR-VNDAREVLVEMEGNGFLPGGF--SRIVFDDDSACSN 199
P+++TYN +L GR VL EM G F S ++ SAC+
Sbjct: 238 EMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVL----SACAR 293
Query: 200 GNGSLR---------ANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQI 250
G LR + TY+ALL F + G +A VL ++ EN +
Sbjct: 294 -EGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSV 352
Query: 251 SYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKM 310
+YN LV AY G+ ++A E M ++G+ P+ +T+ T+I+ + + G+ D+A + M
Sbjct: 353 TYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM 412
Query: 311 LEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDR 368
E G P TYN++++ G+ S + ++L +++ G PN ++ +++ LC ++
Sbjct: 413 KEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNK 469
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 155/353 (43%), Gaps = 8/353 (2%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVL-AVFTDMVESGIRPDVVSYGKAVEAAVMLK 59
M+ +G P+ + N + L G+K +K + VF +M G PD ++ + A
Sbjct: 447 MKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCG 505
Query: 60 DLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYN 119
++ G M + V YN +L L + + + +M + P +Y+
Sbjct: 506 SEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYS 565
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN 179
++ Y K G ++ R+K PS + LL + + + +
Sbjct: 566 LMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKH 625
Query: 180 GFLPGG--FSRI--VFDDDSACSNGNGSLRA--NVAARIDERTYSALLNGFCRVGRIEKA 233
G+ P F+ + +F ++ G L + D TY++L++ + R G KA
Sbjct: 626 GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKA 685
Query: 234 KEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINK 293
+E+L L ++ + P +SYN ++ +C G +++A++ +M ERG++P T+NT ++
Sbjct: 686 EEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSG 745
Query: 294 FCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIE 346
+ G + E ++ M + P T+ +++GY R + + + + +I+
Sbjct: 746 YTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIK 798
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 158/348 (45%), Gaps = 29/348 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+ G LP+V S N +L+G + + L + +M I P+ + +
Sbjct: 194 MKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGK 253
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
LDKG EL+ ME+ + YN ++ G C+ + A KL + M L PN VT+NT
Sbjct: 254 LDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNT 313
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI G+C+ ++++A + MKA N P+ +TYN L+ G G A
Sbjct: 314 LIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMA----------- 362
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
F +D C NG R D TY+AL+ G C+ + KA + + +L
Sbjct: 363 --------FRFYEDMVC---NGIQR-------DILTYNALIFGLCKQAKTRKAAQFVKEL 404
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+ +VP+ +++ L+ C ++ + + M G P+ TFN L++ FC +
Sbjct: 405 DKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDF 464
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKK 348
D A + +++M+ + I T + + NG ++L+E+E K
Sbjct: 465 DGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGK 512
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 152/340 (44%), Gaps = 29/340 (8%)
Query: 11 RSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGC 70
R + LF+T K+F F M + G P V S + + + +D
Sbjct: 169 RVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYRE 228
Query: 71 MEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGE 130
M + ++ P+ + N+V+ G C+ ++ +L +M V+YNTLI G+C+ G
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 131 MEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIV 190
+ A LK M +P+V+T+N L+ G C + ++ +A +V EM+
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKA------------ 336
Query: 191 FDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQI 250
NVA + TY+ L+NG+ + G E A +V NG+ +
Sbjct: 337 ---------------VNVAP--NTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDIL 379
Query: 251 SYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKM 310
+YN L+ C + KA Q +++++ L P+ TF+ LI C D+ K M
Sbjct: 380 TYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSM 439
Query: 311 LEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGM 350
+ G P +T+N L++ + R +F ++L E+ ++ +
Sbjct: 440 IRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSI 479
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 146/307 (47%), Gaps = 29/307 (9%)
Query: 78 PSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSL 137
P+V N + L RV A + + EM + PN T N ++ GYC+ G+++K L
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260
Query: 138 KARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSAC 197
M+ + ++YN L+ G C G ++ A ++ M
Sbjct: 261 LQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMM--------------------- 299
Query: 198 SNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVN 257
G L+ NV T++ L++GFCR ++++A +V ++ V P+ ++YN L+N
Sbjct: 300 --GKSGLQPNVV------TFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLIN 351
Query: 258 AYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAP 317
Y +G E A + E M G++ +T+N LI C+ + +A ++VK++ ++ + P
Sbjct: 352 GYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVP 411
Query: 318 TLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVL 377
T+++LI G N + FE+ + + + G PN ++ L++ C++ A VL
Sbjct: 412 NSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVL 471
Query: 378 GDMASRG 384
+M R
Sbjct: 472 REMVRRS 478
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 139/313 (44%), Gaps = 47/313 (15%)
Query: 79 SVFVYNLVLGGLCKVRRVKDAR----------------KLFDEMLH--RNLVPNTVTYNT 120
S+ + +VL L K R+ K A K+FD +L+ R +++
Sbjct: 114 SLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDS 173
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L + + + A +MK P+V + N + L GRV+ A EM
Sbjct: 174 LFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCK 233
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P + T + +++G+CR G+++K E+L +
Sbjct: 234 ISPNPY-----------------------------TLNMVMSGYCRSGKLDKGIELLQDM 264
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
G + +SYN L+ +C +G + A++ M + GL+P+ VTFNTLI+ FC ++
Sbjct: 265 ERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKL 324
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
+A + +M +AP TYN+LINGY + + F E++ G++ ++++Y +L
Sbjct: 325 QEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNAL 384
Query: 361 INCLCKDRKLLDA 373
I LCK K A
Sbjct: 385 IFGLCKQAKTRKA 397
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 87/168 (51%)
Query: 215 RTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQ 274
R + +L F + + A + ++ + G +P+ S N +++ +G V+ A++ +
Sbjct: 169 RVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYRE 228
Query: 275 MEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISN 334
M + P+ T N +++ +C +G++D+ ++ M G T +YN+LI G+
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 335 FVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMAS 382
++ + K G++PNV+++ +LI+ C+ KL +A V G+M +
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKA 336
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 80/187 (42%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+ V P+ + N L E + DMV +GI+ D+++Y +
Sbjct: 334 MKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAK 393
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
K + + ++KE + P+ ++ ++ G C + +L+ M+ PN T+N
Sbjct: 394 TRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNM 453
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L+ +C+ + + A + M + T + + GL G+ +++L EMEG
Sbjct: 454 LVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKK 513
Query: 181 FLPGGFS 187
FL F+
Sbjct: 514 FLQESFN 520
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 158/348 (45%), Gaps = 29/348 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+ G LP+V S N +L+G + + L + +M I P+ + +
Sbjct: 194 MKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGK 253
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
LDKG EL+ ME+ + YN ++ G C+ + A KL + M L PN VT+NT
Sbjct: 254 LDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNT 313
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI G+C+ ++++A + MKA N P+ +TYN L+ G G A
Sbjct: 314 LIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMA----------- 362
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
F +D C NG R D TY+AL+ G C+ + KA + + +L
Sbjct: 363 --------FRFYEDMVC---NGIQR-------DILTYNALIFGLCKQAKTRKAAQFVKEL 404
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+ +VP+ +++ L+ C ++ + + M G P+ TFN L++ FC +
Sbjct: 405 DKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDF 464
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKK 348
D A + +++M+ + I T + + NG ++L+E+E K
Sbjct: 465 DGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGK 512
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 152/340 (44%), Gaps = 29/340 (8%)
Query: 11 RSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGC 70
R + LF+T K+F F M + G P V S + + + +D
Sbjct: 169 RVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYRE 228
Query: 71 MEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGE 130
M + ++ P+ + N+V+ G C+ ++ +L +M V+YNTLI G+C+ G
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 131 MEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIV 190
+ A LK M +P+V+T+N L+ G C + ++ +A +V EM+
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKA------------ 336
Query: 191 FDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQI 250
NVA + TY+ L+NG+ + G E A +V NG+ +
Sbjct: 337 ---------------VNVAP--NTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDIL 379
Query: 251 SYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKM 310
+YN L+ C + KA Q +++++ L P+ TF+ LI C D+ K M
Sbjct: 380 TYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSM 439
Query: 311 LEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGM 350
+ G P +T+N L++ + R +F ++L E+ ++ +
Sbjct: 440 IRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSI 479
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 146/307 (47%), Gaps = 29/307 (9%)
Query: 78 PSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSL 137
P+V N + L RV A + + EM + PN T N ++ GYC+ G+++K L
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260
Query: 138 KARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSAC 197
M+ + ++YN L+ G C G ++ A ++ M
Sbjct: 261 LQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMM--------------------- 299
Query: 198 SNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVN 257
G L+ NV T++ L++GFCR ++++A +V ++ V P+ ++YN L+N
Sbjct: 300 --GKSGLQPNVV------TFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLIN 351
Query: 258 AYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAP 317
Y +G E A + E M G++ +T+N LI C+ + +A ++VK++ ++ + P
Sbjct: 352 GYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVP 411
Query: 318 TLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVL 377
T+++LI G N + FE+ + + + G PN ++ L++ C++ A VL
Sbjct: 412 NSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVL 471
Query: 378 GDMASRG 384
+M R
Sbjct: 472 REMVRRS 478
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 139/313 (44%), Gaps = 47/313 (15%)
Query: 79 SVFVYNLVLGGLCKVRRVKDAR----------------KLFDEMLH--RNLVPNTVTYNT 120
S+ + +VL L K R+ K A K+FD +L+ R +++
Sbjct: 114 SLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDS 173
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L + + + A +MK P+V + N + L GRV+ A EM
Sbjct: 174 LFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCK 233
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P + T + +++G+CR G+++K E+L +
Sbjct: 234 ISPNPY-----------------------------TLNMVMSGYCRSGKLDKGIELLQDM 264
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
G + +SYN L+ +C +G + A++ M + GL+P+ VTFNTLI+ FC ++
Sbjct: 265 ERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKL 324
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
+A + +M +AP TYN+LINGY + + F E++ G++ ++++Y +L
Sbjct: 325 QEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNAL 384
Query: 361 INCLCKDRKLLDA 373
I LCK K A
Sbjct: 385 IFGLCKQAKTRKA 397
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 87/168 (51%)
Query: 215 RTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQ 274
R + +L F + + A + ++ + G +P+ S N +++ +G V+ A++ +
Sbjct: 169 RVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYRE 228
Query: 275 MEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISN 334
M + P+ T N +++ +C +G++D+ ++ M G T +YN+LI G+
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 335 FVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMAS 382
++ + K G++PNV+++ +LI+ C+ KL +A V G+M +
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKA 336
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 80/187 (42%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+ V P+ + N L E + DMV +GI+ D+++Y +
Sbjct: 334 MKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAK 393
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
K + + ++KE + P+ ++ ++ G C + +L+ M+ PN T+N
Sbjct: 394 TRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNM 453
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L+ +C+ + + A + M + T + + GL G+ +++L EMEG
Sbjct: 454 LVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKK 513
Query: 181 FLPGGFS 187
FL F+
Sbjct: 514 FLQESFN 520
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 134 bits (337), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 163/366 (44%), Gaps = 33/366 (9%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
+RK P V N L + Q+++ +++ ++ES P +Y ++A M
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 61 LDKGFELMGCMEKERVGPS---VFVYNLVLGGLCKVR-RVKDARKLFDEMLHRNLVPNTV 116
+++ ++ M+ V P V VYN + GL K + ++A +F M P T
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 117 TYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEM 176
TYN +I+ Y K + ++ L M++ +P++ TY L+ G A E+ ++
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 347
Query: 177 EGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEV 236
+ +G P D Y+AL+ + R G A E+
Sbjct: 348 QEDGLEP-----------------------------DVYVYNALMESYSRAGYPYGAAEI 378
Query: 237 LAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCE 296
+ + G P + SYNI+V+AY G A E+M+ G+ P+ + L++ + +
Sbjct: 379 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 438
Query: 297 TGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVIS 356
+V + E VK+M E G+ P NS++N YGR+ F K +IL E+E ++ +
Sbjct: 439 ARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIST 498
Query: 357 YGSLIN 362
Y LIN
Sbjct: 499 YNILIN 504
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 180/400 (45%), Gaps = 36/400 (9%)
Query: 4 DGVLPSVRSV-NRLFETLVGSKQFEKVLAVFTDMVESGIRPDV-VSYGKAVEAAVMLKDL 61
DG+ P + + ++ + +KV V G P S+ + +V L+ L
Sbjct: 101 DGIFPVLSPIAQKILSFIQKETDPDKVADVL------GALPSTHASWDDLINVSVQLR-L 153
Query: 62 DKGFE--LMGC---MEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTV 116
+K ++ ++ C + K P V +NL++ + + K+A L+ ++L VP
Sbjct: 154 NKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTED 213
Query: 117 TYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVI---TYNCLLGGLCS-SGRVNDAREV 172
TY LI YC G +E+A + M+ + P I YN + GL G +A +V
Sbjct: 214 TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDV 273
Query: 173 LVEMEGNGFLP------------GGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSAL 220
M+ + P G S+ C + + N+ TY+AL
Sbjct: 274 FQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNIC------TYTAL 327
Query: 221 LNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGL 280
+N F R G EKA+E+ +L E+G+ P YN L+ +Y GY A + M+ G
Sbjct: 328 VNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGC 387
Query: 281 KPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFE 340
+P ++N +++ + G AE ++M GIAPT++++ L++ Y + + KC
Sbjct: 388 EPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEA 447
Query: 341 ILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDM 380
I++E+ + G++P+ S++N + + E +L +M
Sbjct: 448 IVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEM 487
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 87/200 (43%), Gaps = 4/200 (2%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+ G P S N + + + AVF +M GI P + S+ + A +D
Sbjct: 382 MQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARD 441
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ K ++ M + V P FV N +L ++ + K+ EM + + TYN
Sbjct: 442 VTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNI 501
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI+ Y K G +E+ L +K N P V+T+ +G EV EM +G
Sbjct: 502 LINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 561
Query: 181 FLP-GGFSRIVFDDDSACSN 199
P GG ++++ SACS+
Sbjct: 562 CAPDGGTAKVLL---SACSS 578
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 163/366 (44%), Gaps = 33/366 (9%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
+RK P V N L + Q+++ +++ ++ES P +Y ++A M
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 61 LDKGFELMGCMEKERVGPS---VFVYNLVLGGLCKVR-RVKDARKLFDEMLHRNLVPNTV 116
+++ ++ M+ V P V VYN + GL K + ++A +F M P T
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 117 TYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEM 176
TYN +I+ Y K + ++ L M++ +P++ TY L+ G A E+ ++
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 325
Query: 177 EGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEV 236
+ +G P D Y+AL+ + R G A E+
Sbjct: 326 QEDGLEP-----------------------------DVYVYNALMESYSRAGYPYGAAEI 356
Query: 237 LAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCE 296
+ + G P + SYNI+V+AY G A E+M+ G+ P+ + L++ + +
Sbjct: 357 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 416
Query: 297 TGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVIS 356
+V + E VK+M E G+ P NS++N YGR+ F K +IL E+E ++ +
Sbjct: 417 ARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIST 476
Query: 357 YGSLIN 362
Y LIN
Sbjct: 477 YNILIN 482
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 180/400 (45%), Gaps = 36/400 (9%)
Query: 4 DGVLPSVRSV-NRLFETLVGSKQFEKVLAVFTDMVESGIRPDV-VSYGKAVEAAVMLKDL 61
DG+ P + + ++ + +KV V G P S+ + +V L+ L
Sbjct: 79 DGIFPVLSPIAQKILSFIQKETDPDKVADVL------GALPSTHASWDDLINVSVQLR-L 131
Query: 62 DKGFE--LMGC---MEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTV 116
+K ++ ++ C + K P V +NL++ + + K+A L+ ++L VP
Sbjct: 132 NKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTED 191
Query: 117 TYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVI---TYNCLLGGLCS-SGRVNDAREV 172
TY LI YC G +E+A + M+ + P I YN + GL G +A +V
Sbjct: 192 TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDV 251
Query: 173 LVEMEGNGFLP------------GGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSAL 220
M+ + P G S+ C + + N+ TY+AL
Sbjct: 252 FQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNIC------TYTAL 305
Query: 221 LNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGL 280
+N F R G EKA+E+ +L E+G+ P YN L+ +Y GY A + M+ G
Sbjct: 306 VNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGC 365
Query: 281 KPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFE 340
+P ++N +++ + G AE ++M GIAPT++++ L++ Y + + KC
Sbjct: 366 EPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEA 425
Query: 341 ILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDM 380
I++E+ + G++P+ S++N + + E +L +M
Sbjct: 426 IVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEM 465
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 87/200 (43%), Gaps = 4/200 (2%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+ G P S N + + + AVF +M GI P + S+ + A +D
Sbjct: 360 MQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARD 419
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ K ++ M + V P FV N +L ++ + K+ EM + + TYN
Sbjct: 420 VTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNI 479
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI+ Y K G +E+ L +K N P V+T+ +G EV EM +G
Sbjct: 480 LINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 539
Query: 181 FLP-GGFSRIVFDDDSACSN 199
P GG ++++ SACS+
Sbjct: 540 CAPDGGTAKVLL---SACSS 556
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 177/382 (46%), Gaps = 31/382 (8%)
Query: 3 KDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLD 62
+ G R+ N + L ++QFE +++V +M G+ + ++ A++A K+
Sbjct: 188 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERK 246
Query: 63 KGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLI 122
K + M+K + V N +L L + + K+A+ LFD++ R PN +TY L+
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLL 305
Query: 123 DGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFL 182
+G+C+V + +A + M +P ++ +N +L GL S + +DA ++ M+ G
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPC 365
Query: 183 PGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVE 242
P NV R+Y+ ++ FC+ +E A E +V+
Sbjct: 366 P-----------------------NV------RSYTIMIRDFCKQSSMETAIEYFDDMVD 396
Query: 243 NGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQ 302
+G+ P Y L+ + + ++ + ++M+E+G P T+N LI +
Sbjct: 397 SGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEH 456
Query: 303 AERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLIN 362
A R KM++ I P++ T+N ++ Y N+ + EE+ KKG+ P+ SY LI
Sbjct: 457 ATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIR 516
Query: 363 CLCKDRKLLDAEIVLGDMASRG 384
L + K +A L +M +G
Sbjct: 517 GLIGEGKSREACRYLEEMLDKG 538
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 152/349 (43%), Gaps = 34/349 (9%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+K V ++N L ++L G + K V D ++ P++++Y + +++
Sbjct: 255 MKKYKFKIGVETINCLLDSL-GRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRN 313
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L + + M + + P + +N++L GL + R+ DA KLF M + PN +Y
Sbjct: 314 LIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTI 373
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+I +CK ME A M +P Y CL+ G + +++ E+L EM+ G
Sbjct: 374 MIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG 433
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P G +TY+AL+ E A + K+
Sbjct: 434 HPPDG-----------------------------KTYNALIKLMANQKMPEHATRIYNKM 464
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
++N + PS ++N+++ +Y E E+M ++G+ P ++ LI G+
Sbjct: 465 IQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKS 524
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKG 349
+A R++++ML+KG+ L YN + R EI EE+ ++
Sbjct: 525 REACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ----PEIFEELAQRA 569
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 143/310 (46%), Gaps = 30/310 (9%)
Query: 8 PSVRSVNRLFETLVGSKQF-EKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFE 66
P + +NR+ + LV + + +K +F G+ P+ SY ++A + DL ++
Sbjct: 152 PQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQ 211
Query: 67 LMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYC 126
L G M + V P V Y +++ G C+ +V A +L D+ML++ VP+ ++Y TL++ C
Sbjct: 212 LFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLC 271
Query: 127 KVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGF 186
+ ++ +A+ L RMK P ++ YN ++ G C R DAR+VL +M NG P
Sbjct: 272 RKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSV 331
Query: 187 SRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVV 246
S Y L+ G C G ++ K+ L +++ G
Sbjct: 332 S-----------------------------YRTLIGGLCDQGMFDEGKKYLEEMISKGFS 362
Query: 247 PSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERW 306
P N LV +C G VE+A E + + G T+ +I C E ++ + +
Sbjct: 363 PHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLF 422
Query: 307 VKKMLEKGIA 316
++ +++ I
Sbjct: 423 LEDAVKEEIT 432
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 141/312 (45%), Gaps = 30/312 (9%)
Query: 16 LFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD-LDKGFELMGCMEKE 74
L + +K EKVL+ F M+E P + ++ V + L K FEL
Sbjct: 125 LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLH 184
Query: 75 RVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKA 134
V P+ YNL++ C + A +LF +ML R++VP+ +Y LI G+C+ G++ A
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 135 FSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDD 194
L M P ++Y LL LC ++ +A ++L M+ G P
Sbjct: 245 MELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNP----------- 293
Query: 195 SACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNI 254
D Y+ ++ GFCR R A++VL ++ NG P+ +SY
Sbjct: 294 ------------------DLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRT 335
Query: 255 LVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKG 314
L+ C +G ++ + E+M +G P + N L+ FC G+V++A V+ +++ G
Sbjct: 336 LIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Query: 315 IAPTLETYNSLI 326
+T+ +I
Sbjct: 396 ETLHSDTWEMVI 407
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 117/265 (44%), Gaps = 34/265 (12%)
Query: 103 FDEMLHRNLVPNTVTYNTLIDGY-CKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLC 161
F +ML N P N ++D G ++KAF L + P+ +YN L+ C
Sbjct: 142 FYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFC 201
Query: 162 SSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALL 221
+ND + ++ G L +V +D +Y L+
Sbjct: 202 ----LNDDLSIAYQLFGK-----------------------MLERDVVPDVD--SYKILI 232
Query: 222 NGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLK 281
GFCR G++ A E+L ++ G VP ++SY L+N+ C + + +A + +M+ +G
Sbjct: 233 QGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCN 292
Query: 282 PSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEI 341
P V +NT+I FC A + + ML G +P +Y +LI G F + +
Sbjct: 293 PDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKY 352
Query: 342 LEEIEKKGMKPNVISYGSLINCLCK 366
LEE+ KG P+ S+ NCL K
Sbjct: 353 LEEMISKGFSPHF----SVSNCLVK 373
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 118/268 (44%), Gaps = 30/268 (11%)
Query: 118 YNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSS-GRVNDAREVLVEM 176
+ LI Y + EK S +M N P N +L L S G + A E+
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 177 EGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEV 236
+G +P + R+Y+ L+ FC + A ++
Sbjct: 182 RLHGVMP-----------------------------NTRSYNLLMQAFCLNDDLSIAYQL 212
Query: 237 LAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCE 296
K++E VVP SY IL+ +C +G V A++ + M +G P +++ TL+N C
Sbjct: 213 FGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCR 272
Query: 297 TGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVIS 356
++ +A + + +M KG P L YN++I G+ R + ++L+++ G PN +S
Sbjct: 273 KTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVS 332
Query: 357 YGSLINCLCKDRKLLDAEIVLGDMASRG 384
Y +LI LC + + L +M S+G
Sbjct: 333 YRTLIGGLCDQGMFDEGKKYLEEMISKG 360
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 86/180 (47%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + V+P V S L + Q + + DM+ G PD +SY + +
Sbjct: 216 MLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQ 275
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L + ++L+ M+ + P + YN ++ G C+ R DARK+ D+ML PN+V+Y T
Sbjct: 276 LREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRT 335
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI G C G ++ M + P NCL+ G CS G+V +A +V+ + NG
Sbjct: 336 LIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 172/355 (48%), Gaps = 22/355 (6%)
Query: 14 NRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEK 73
N + S E + M E G+ P +Y ++ + ++ EL+ M +
Sbjct: 119 NAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLE 178
Query: 74 E---RVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGE 130
E VGP++ +N+++ CK ++V++A ++ +M + P+TVTYNT+ Y + GE
Sbjct: 179 EGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGE 238
Query: 131 MEKAFS--LKARMKAPNAEPSVITYNCLLGGLCSSGRVNDA-------REVLVEMEGNGF 181
+A S ++ + A+P+ T ++GG C GRV D +E+ VE F
Sbjct: 239 TVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVF 298
Query: 182 --LPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAK 239
L GF V D D NV A D TYS ++N + G +EKA +V +
Sbjct: 299 NSLINGFVE-VMDRDGIDEVLTLMKECNVKA--DVITYSTVMNAWSSAGYMEKAAQVFKE 355
Query: 240 LVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQM--EERGLKPSYVTFNTLINKFCET 297
+V+ GV P +Y+IL Y +KA + E + E R P+ V F T+I+ +C
Sbjct: 356 MVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR---PNVVIFTTVISGWCSN 412
Query: 298 GEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKP 352
G +D A R KM + G++P ++T+ +L+ GY + K E+L+ + G+KP
Sbjct: 413 GSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKP 467
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 181/390 (46%), Gaps = 18/390 (4%)
Query: 9 SVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELM 68
+VRS +L L+ + + VF + E+G RP ++SY + A + K ++
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIV 103
Query: 69 GCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKV 128
+E+ +N V+ + ++DA + +M L P T TYNTLI GY
Sbjct: 104 SEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIA 163
Query: 129 GEMEKAFSLKARMKAP---NAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGG 185
G+ E++ L M + P++ T+N L+ C +V +A EV+ +ME G P
Sbjct: 164 GKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRP-- 221
Query: 186 FSRIVFDDDSACSNGNG-SLRANV----------AARIDERTYSALLNGFCRVGRIEKAK 234
+ ++ + C G ++RA A+ + RT ++ G+CR GR+
Sbjct: 222 -DTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGL 280
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
+ ++ E V + + +N L+N + + + M+E +K +T++T++N +
Sbjct: 281 RFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAW 340
Query: 295 CETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNV 354
G +++A + K+M++ G+ P Y+ L GY R K E+LE + + +PNV
Sbjct: 341 SSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNV 399
Query: 355 ISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ + ++I+ C + + DA V M G
Sbjct: 400 VIFTTVISGWCSNGSMDDAMRVFNKMCKFG 429
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 169/381 (44%), Gaps = 46/381 (12%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKA----VEAAVMLKDLDK 63
P++R+ N L + K+ E+ V M E G+RPD V+Y V+ ++ +
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 64 GFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLID 123
E M + KE+ P+ +V+GG C+ RV+D + M + N V +N+LI+
Sbjct: 246 VVEKM--VMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLIN 303
Query: 124 GYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP 183
G+ +V + + + MK N + VITY+ ++ S+G + A +V EM G P
Sbjct: 304 GFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKP 363
Query: 184 GGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVEN 243
D YS L G+ R +KA+E+L L+
Sbjct: 364 -----------------------------DAHAYSILAKGYVRAKEPKKAEELLETLIVE 394
Query: 244 GVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQA 303
P+ + + +++ +C G ++ A++ +M + G+ P+ TF TL+ + E + +A
Sbjct: 395 S-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKA 453
Query: 304 ERWVKKMLEKGIAPTLETYNSLINGY---------GRISNFVKCFEI-LEEIEKKGMKPN 353
E ++ M G+ P T+ L + + N +KC +I + ++EK K +
Sbjct: 454 EEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKCKDIEIAKLEKLYQKQS 513
Query: 354 VISYGSLINCLCKDRKLLDAE 374
S +L+ R+L A+
Sbjct: 514 SGSSFNLLQIPVGKRELPTAK 534
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 194/399 (48%), Gaps = 25/399 (6%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGS--KQFEKVLA--VFTDMVESGIRPDVVSYGKAVEAAV 56
M + G+ P+V ++ +++GS KQ V A F M+ESGI+PD ++Y +
Sbjct: 573 MEELGLRPTVA----IYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYA 628
Query: 57 MLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTV 116
+D+ EL+ + K + PS F Y +++ G K+ ++ + D+ML L PN V
Sbjct: 629 RNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVV 688
Query: 117 TYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEM 176
Y LI + K G+ + +F+L M + + I Y LL GL + R+V+VE
Sbjct: 689 LYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVE- 747
Query: 177 EGNGFLPGGFSR---IVFDDDSACSNGNGSLRANVAARIDERT------YSALLNGFCRV 227
G L R +V S + G+ S V ++ + ++ ++ G+C
Sbjct: 748 PGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAA 807
Query: 228 GRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTF 287
GR+++A L + + G+VP+ ++Y IL+ ++ G +E AI + E +P V +
Sbjct: 808 GRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAI---DLFEGTNCEPDQVMY 864
Query: 288 NTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLIN--GYGRISNFVKCFEILEEI 345
+TL+ C+ A + +M + GI P ++Y L+ Y R++ ++ ++++++
Sbjct: 865 STLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLT--MEAVKVVKDM 922
Query: 346 EKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ P I++ LI LC+++KL +A + M G
Sbjct: 923 AALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 961
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 150/348 (43%), Gaps = 7/348 (2%)
Query: 30 LAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGG 89
+ ++ MVE D + + + L LDKG + M K+ V +VF Y++++G
Sbjct: 292 MRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGS 351
Query: 90 LCKVRRVKDARKLF-DEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEP 148
CK V A +LF + ++ N Y LI G+ K G M+KA L RM P
Sbjct: 352 YCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVP 411
Query: 149 SVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANV 208
ITY LL L + A +L + NG G + V DD SL +
Sbjct: 412 DHITYFVLLKMLPKCHELKYAMVILQSILDNG---CGINPPVIDDLGNIEVKVESLLGEI 468
Query: 209 A---ARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYV 265
A A + + + C A + K+V G P SYN ++ E +
Sbjct: 469 ARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENII 528
Query: 266 EKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSL 325
E ++E P T+ ++N+ C+ + D A + M E G+ PT+ Y+S+
Sbjct: 529 EDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSI 588
Query: 326 INGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDA 373
I G+ V+ E ++ + G++P+ I+Y +IN ++ ++ +A
Sbjct: 589 IGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEA 636
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 170/368 (46%), Gaps = 39/368 (10%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESG--IRPDVVSYGKAVEAAVML 58
M +G++P + L + L + + + + ++++G I P V+ +E V
Sbjct: 404 MLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVE- 462
Query: 59 KDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTY 118
L+G + ++ + +V LC R A ++M++ P +Y
Sbjct: 463 -------SLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSY 515
Query: 119 NTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEG 178
N++I + +E SL ++ + P V TY ++ LC + A ++ ME
Sbjct: 516 NSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEE 575
Query: 179 NGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLA 238
G LR VA YS+++ + GR+ +A+E A
Sbjct: 576 LG-----------------------LRPTVA------IYSSIIGSLGKQGRVVEAEETFA 606
Query: 239 KLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETG 298
K++E+G+ P +I+Y I++N Y G +++A + E++ + L+PS T+ LI+ F + G
Sbjct: 607 KMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMG 666
Query: 299 EVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYG 358
+++ +++ KMLE G++P + Y +LI + + +F F + + + +K + I+Y
Sbjct: 667 MMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYI 726
Query: 359 SLINCLCK 366
+L++ L +
Sbjct: 727 TLLSGLWR 734
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/422 (21%), Positives = 164/422 (38%), Gaps = 73/422 (17%)
Query: 3 KDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLD 62
+ G+L S R V R + GS + V V++GI D YG + L ++
Sbjct: 55 RRGLLDSAREVIR--RVIDGSSSISEAALVADFAVDNGIELDSSCYGALIRK---LTEMG 109
Query: 63 KGFELMGCMEKERVG----PSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTY 118
+ + +G P V + ++ L K+RR +AR D ++ P+ +
Sbjct: 110 QPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSS 169
Query: 119 NTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEG 178
+ ++D C +AF ++K + + L GLC G +N+A +L
Sbjct: 170 SLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGML----- 224
Query: 179 NGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLA 238
D+ C L N+ Y +L FC+ G +A+ +
Sbjct: 225 ---------------DTLCGMTRMPLPVNL--------YKSLFYCFCKRGCAAEAEALFD 261
Query: 239 KLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETG 298
+ +G ++ Y L+ YC + + A++ +M ER + FNTLI+ F + G
Sbjct: 262 HMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLG 321
Query: 299 EVDQAERWVKKMLEKGIAPTLETYNSLINGYGR-------------------ISNFVKCF 339
+D+ +M++KG+ + TY+ +I Y + IS V C+
Sbjct: 322 MLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCY 381
Query: 340 -----------------EILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMAS 382
++L + G+ P+ I+Y L+ L K +L A ++L +
Sbjct: 382 TNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILD 441
Query: 383 RG 384
G
Sbjct: 442 NG 443
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 177/382 (46%), Gaps = 31/382 (8%)
Query: 3 KDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLD 62
+ G + R+ N + L ++QFE +++V +M G+ + ++ A++A K+
Sbjct: 188 RQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERK 246
Query: 63 KGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLI 122
K + M+K + V N +L L + + K+A+ LFD++ R PN +TY L+
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLL 305
Query: 123 DGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFL 182
+G+C+V + +A + M +P ++ +N +L GL S + +DA ++ M+ G
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 365
Query: 183 PGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVE 242
P NV R+Y+ ++ FC+ +E A E +V+
Sbjct: 366 P-----------------------NV------RSYTIMIRDFCKQSSMETAIEYFDDMVD 396
Query: 243 NGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQ 302
+G+ P Y L+ + + ++ + ++M+E+G P T+N LI +
Sbjct: 397 SGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEH 456
Query: 303 AERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLIN 362
R KM++ I P++ T+N ++ Y N+ + +E+ KKG+ P+ SY LI
Sbjct: 457 GTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIR 516
Query: 363 CLCKDRKLLDAEIVLGDMASRG 384
L + K +A L +M +G
Sbjct: 517 GLISEGKSREACRYLEEMLDKG 538
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 149/349 (42%), Gaps = 34/349 (9%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+K V ++N L ++L G + K V D ++ P++++Y + +++
Sbjct: 255 MKKYKFKIGVETINCLLDSL-GRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRN 313
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L + + M + P + +N++L GL + + DA KLF M + PN +Y
Sbjct: 314 LIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTI 373
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+I +CK ME A M +P Y CL+ G + +++ E+L EM+ G
Sbjct: 374 MIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG 433
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P G +TY+AL+ E + K+
Sbjct: 434 HPPDG-----------------------------KTYNALIKLMANQKMPEHGTRIYNKM 464
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
++N + PS ++N+++ +Y E ++M ++G+ P ++ LI G+
Sbjct: 465 IQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKS 524
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKG 349
+A R++++ML+KG+ L YN + R EI EE+ ++
Sbjct: 525 REACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ----PEIFEELAQRA 569
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 181/399 (45%), Gaps = 29/399 (7%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDV----VSYGKAVEAAVMLKD 60
G P +++ + +L + +F++ F + SG PD V + + + +
Sbjct: 85 GYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVST 144
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L L+G +KE V PS+ YN ++ LC + RV DA KL +M +R +P+ VT+ T
Sbjct: 145 LGVIHRLIG-FKKEFV-PSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTT 202
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEM---- 176
LI GYC++ E+E A + M+ P+ +T + L+GG V R+++ E+
Sbjct: 203 LIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYM 262
Query: 177 ---EGNGFLPGGFSRIVFDDDSACSNG----------NGSLRANVAARIDERTYSALLNG 223
F+ +V DS C G N SL +V E Y +++
Sbjct: 263 KNETDTSMKAAAFANLV---DSMCREGYFNDIFEIAENMSLCESVNV---EFAYGHMIDS 316
Query: 224 FCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPS 283
CR R A ++ + G+ P + SYN +++ C +G +A Q E+ E PS
Sbjct: 317 LCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPS 376
Query: 284 YVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILE 343
T+ L+ C+ + +A ++ ML K A YN + G + N + +L
Sbjct: 377 EYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLV 436
Query: 344 EIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMAS 382
+ + +P+ + ++IN LCK ++ DA VL DM +
Sbjct: 437 SMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMT 475
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 181/440 (41%), Gaps = 64/440 (14%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGS----KQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAV 56
MR G LP V + F TL+G ++ E VF +M GIRP+ ++ + +
Sbjct: 188 MRNRGHLPDVVT----FTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFL 243
Query: 57 MLKDLDKGFELMGCM-------------------------------------EKERVGPS 79
++D++ G +LM + E + S
Sbjct: 244 KMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCES 303
Query: 80 V---FVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFS 136
V F Y ++ LC+ RR A ++ M + L P +YN +I G CK G +A+
Sbjct: 304 VNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQ 363
Query: 137 LKARMKAPNAEPSVITYNCLLGGLC---SSGRVNDAREVLVEMEG-------NGFLPGGF 186
L PS TY L+ LC +G+ + E+++ EG N +L G
Sbjct: 364 LLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRG-- 421
Query: 187 SRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGV- 245
V D+ + N S+ R DE T + ++NG C++GR++ A +VL ++
Sbjct: 422 -LCVMDNPTEILNVLVSMLQG-DCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFC 479
Query: 246 VPSQISYNILVNAYCHEGYVEKAIQTAEQ-MEERGLKPSYVTFNTLINKFCETGEVDQAE 304
P ++ N ++ +G E+A+ + M E +KP V +N +I + + D+A
Sbjct: 480 APDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAM 539
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
++ + + TY +I+G + + +++ + + Y + + L
Sbjct: 540 SVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGL 599
Query: 365 CKDRKLLDAEIVLGDMASRG 384
C+ L DA L D+A G
Sbjct: 600 CQSGYLSDACHFLYDLADSG 619
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 142/335 (42%), Gaps = 12/335 (3%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+ G+ P S N + L + + + E P +Y +E+ D
Sbjct: 333 MKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELD 392
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
K ++ M ++ +YN+ L GLC + + + ML + P+ T NT
Sbjct: 393 TGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNT 452
Query: 121 LIDGYCKVGEMEKAFS-LKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVE-MEG 178
+I+G CK+G ++ A L M P +T N ++ GL + GR +A +VL M
Sbjct: 453 VINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPE 512
Query: 179 NGFLPG--GFSRIV------FDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRI 230
N PG ++ ++ D A S +A+V A D TY+ +++G C ++
Sbjct: 513 NKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTA--DSTTYAIIIDGLCVTNKV 570
Query: 231 EKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTL 290
+ AK+ ++ Y + C GY+ A + + G P+ V +NT+
Sbjct: 571 DMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTV 630
Query: 291 INKFCETGEVDQAERWVKKMLEKGIAPTLETYNSL 325
I + +G +A + +++M + G AP T+ L
Sbjct: 631 IAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 1/186 (0%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTD-MVESGIRPDVVSYGKAVEAAVMLKDLDKGFE 66
P ++N + L+ + E+ L V M E+ I+P VV+Y + L D+
Sbjct: 481 PDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMS 540
Query: 67 LMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYC 126
+ G +EK V Y +++ GLC +V A+K +D+++ + + Y + G C
Sbjct: 541 VFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLC 600
Query: 127 KVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGF 186
+ G + A + A P+V+ YN ++ SG +A ++L EM NG P
Sbjct: 601 QSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAV 660
Query: 187 SRIVFD 192
+ + D
Sbjct: 661 TWRILD 666
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 110/253 (43%), Gaps = 19/253 (7%)
Query: 148 PSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGG------FSRIVFDDDSACSNGN 201
P + + ++ LC +GR ++A + +GF+P +R+++ + G
Sbjct: 88 PDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGV 147
Query: 202 -----GSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILV 256
G + V + + Y+ L+N C + R+ A +++ + G +P +++ L+
Sbjct: 148 IHRLIGFKKEFVPSLTN---YNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLI 204
Query: 257 NAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF-----CETGEVDQAERWVKKML 311
YC +E A + ++M G++P+ +T + LI F ETG E W
Sbjct: 205 GGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKN 264
Query: 312 EKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLL 371
E + + +L++ R F FEI E + +YG +I+ LC+ R+
Sbjct: 265 ETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNH 324
Query: 372 DAEIVLGDMASRG 384
A ++ M S+G
Sbjct: 325 GAARIVYIMKSKG 337
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Query: 266 EKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSL 325
++A++ + + RG +P + +++I+ C+ G D+A R L G P T N +
Sbjct: 72 DEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVI 131
Query: 326 INGYGRISNFVKCFEILEEI--EKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
I + V ++ + KK P++ +Y L+N LC +++DA ++ DM +R
Sbjct: 132 IARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNR 191
Query: 384 G 384
G
Sbjct: 192 G 192
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 163/380 (42%), Gaps = 12/380 (3%)
Query: 14 NRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEK 73
N + L + + + M P S V + LDK ++ M
Sbjct: 108 NEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVM 167
Query: 74 ERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEK 133
P YN+++G LCK ++ A L ++M P+ +TYNT+I G E+
Sbjct: 168 SGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQ 227
Query: 134 AFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG--GFSRIVF 191
A P +ITY L+ +C A EVL +M G P ++ +V
Sbjct: 228 AIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLV- 286
Query: 192 DDDSACSNGNGSLRANVAARI-------DERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
+ C GN A+V I + TY+ LL+ C ++ +E+L + +
Sbjct: 287 --NYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTS 344
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
P+ I+YNIL+N C + +AI QM E+ P VT+NT++ + G VD A
Sbjct: 345 YCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAI 404
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
+ + P L TYNS+I+G + K E+ ++ G+ P+ I+ SLI
Sbjct: 405 ELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGF 464
Query: 365 CKDRKLLDAEIVLGDMASRG 384
C+ + +A VL + ++RG
Sbjct: 465 CRANLVEEAGQVLKETSNRG 484
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 161/375 (42%), Gaps = 22/375 (5%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G +P + N + L L + DM SG PDV++Y + +
Sbjct: 165 MVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGN 224
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
++ + P + Y +++ +C+ A ++ ++M P+ VTYN+
Sbjct: 225 AEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNS 284
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L++ C+ G +E+ S+ + + E + +TYN LL LCS ++ E+L M
Sbjct: 285 LVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTS 344
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARI--------------DERTYSALLNGFCR 226
+ P + + NG +A + +R D TY+ +L +
Sbjct: 345 YCPTVITYNILI--------NGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSK 396
Query: 227 VGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVT 286
G ++ A E+L L P I+YN +++ +G ++KA++ QM + G+ P +T
Sbjct: 397 EGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDIT 456
Query: 287 FNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIE 346
+LI FC V++A + +K+ +G TY +I G + E++E +
Sbjct: 457 RRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIML 516
Query: 347 KKGMKPNVISYGSLI 361
G KP+ Y +++
Sbjct: 517 TGGCKPDETIYTAIV 531
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 129/298 (43%), Gaps = 29/298 (9%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M +G P + + N L E+V +V ++ G+ + V+Y + + +
Sbjct: 270 MAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEY 329
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
D+ E++ M + P+V YN+++ GLCK R + A F +ML + +P+ VTYNT
Sbjct: 330 WDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNT 389
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
++ K G ++ A L +K P +ITYN ++ GL G + A E+ +M G
Sbjct: 390 VLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAG 449
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P D+ T +L+ GFCR +E+A +VL +
Sbjct: 450 IFP-----------------------------DDITRRSLIYGFCRANLVEEAGQVLKET 480
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETG 298
G +Y +++ C + +E AI+ E M G KP + ++ E G
Sbjct: 481 SNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMG 538
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 149/337 (44%), Gaps = 12/337 (3%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G P V + N + + E+ + + D +++G P +++Y VE
Sbjct: 200 MSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCG 259
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ E++ M E P + YN ++ C+ +++ + +L L NTVTYNT
Sbjct: 260 SARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNT 319
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L+ C ++ + M + P+VITYN L+ GLC + ++ A + +M
Sbjct: 320 LLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQK 379
Query: 181 FLP---------GGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIE 231
LP G S+ DD+ G L N TY+++++G + G ++
Sbjct: 380 CLPDIVTYNTVLGAMSKEGMVDDAIELLG---LLKNTCCPPGLITYNSVIDGLAKKGLMK 436
Query: 232 KAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLI 291
KA E+ ++++ G+ P I+ L+ +C VE+A Q ++ RG T+ +I
Sbjct: 437 KALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVI 496
Query: 292 NKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLING 328
C+ E++ A V+ ML G P Y +++ G
Sbjct: 497 QGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKG 533
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 119/252 (47%), Gaps = 31/252 (12%)
Query: 133 KAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFD 192
K F L + P E T N +L LCS+G++ DA +++ M + +P
Sbjct: 89 KQFGLSS--DGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVP--------- 137
Query: 193 DDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISY 252
+CSN L+ G R+ +++KA +L +V +G VP I+Y
Sbjct: 138 HFPSCSN--------------------LVRGLARIDQLDKAMCILRVMVMSGGVPDTITY 177
Query: 253 NILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLE 312
N+++ C +G++ A+ E M G P +T+NT+I + G +QA R+ K L+
Sbjct: 178 NMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQ 237
Query: 313 KGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLD 372
G P + TY L+ R + E+LE++ +G P++++Y SL+N C+ L +
Sbjct: 238 NGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEE 297
Query: 373 AEIVLGDMASRG 384
V+ + S G
Sbjct: 298 VASVIQHILSHG 309
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 176/382 (46%), Gaps = 31/382 (8%)
Query: 3 KDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLD 62
+ G R+ N + L ++QFE +++V +M G+ + ++ A++A K+
Sbjct: 187 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERK 245
Query: 63 KGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLI 122
K + M+K + V N +L L + + K+A+ LFD++ R PN +TY L+
Sbjct: 246 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLL 304
Query: 123 DGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFL 182
+G+C+V + +A + M +P ++ +N +L GL S + +DA ++ M+ G
Sbjct: 305 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 364
Query: 183 PGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVE 242
P NV R+Y+ ++ FC+ +E A E +V+
Sbjct: 365 P-----------------------NV------RSYTIMIRDFCKQSSMETAIEYFDDMVD 395
Query: 243 NGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQ 302
+G+ P Y L+ + + ++ + ++M+E+G P T+N LI +
Sbjct: 396 SGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEH 455
Query: 303 AERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLIN 362
R KM++ I P++ T+N ++ Y N+ + +E+ KKG+ P+ SY LI
Sbjct: 456 GTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIR 515
Query: 363 CLCKDRKLLDAEIVLGDMASRG 384
L + K +A L +M +G
Sbjct: 516 GLISEGKSREACRYLEEMLDKG 537
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 149/349 (42%), Gaps = 34/349 (9%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+K V ++N L ++L G + K V D ++ P++++Y + +++
Sbjct: 254 MKKYKFKIGVETINCLLDSL-GRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRN 312
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L + + M + P + +N++L GL + + DA KLF M + PN +Y
Sbjct: 313 LIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTI 372
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+I +CK ME A M +P Y CL+ G + +++ E+L EM+ G
Sbjct: 373 MIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG 432
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P G +TY+AL+ E + K+
Sbjct: 433 HPPDG-----------------------------KTYNALIKLMANQKMPEHGTRIYNKM 463
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
++N + PS ++N+++ +Y E ++M ++G+ P ++ LI G+
Sbjct: 464 IQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKS 523
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKG 349
+A R++++ML+KG+ L YN + R EI EE+ ++
Sbjct: 524 REACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ----PEIFEELAQRA 568
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 182/392 (46%), Gaps = 17/392 (4%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G + +V + N + + + + L+VF M++ G+ P+VVS+ ++ A D+
Sbjct: 213 GYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFA 272
Query: 65 FEL---MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTL 121
+L MG M V P+ YN V+ G CK R+ A ++ +M+ + N TY L
Sbjct: 273 LQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGAL 332
Query: 122 IDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGF 181
+D Y + G ++A L M + + + YN ++ L G + A VL +M
Sbjct: 333 VDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNM 392
Query: 182 LPGGFSRIVFDDDSACSNGNGSLRANVAARIDERT-------YSALLNGFCRVGRIEKAK 234
F++ + C NG +I E+ ++ L++ F R ++ A
Sbjct: 393 QIDRFTQAIVVR-GLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACAD 451
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
++L ++ G+ IS+ L++ Y EG +E+A++ + M + + V +N+++N
Sbjct: 452 QILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGL 511
Query: 295 CETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNV 354
+ G AE V M K I TYN+L+N + N + +IL +++K+ + +V
Sbjct: 512 SKRGMAGAAEAVVNAMEIKDIV----TYNTLLNESLKTGNVEEADDILSKMQKQDGEKSV 567
Query: 355 --ISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+++ +IN LCK A+ VL M RG
Sbjct: 568 SLVTFNIMINHLCKFGSYEKAKEVLKFMVERG 599
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 150/316 (47%), Gaps = 32/316 (10%)
Query: 58 LKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVT 117
+ ++D+ +++ M+ +V +NLV+ CK ++ +A +F ML + PN V+
Sbjct: 196 VNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVS 255
Query: 118 YNTLIDGYCKVGEMEKAFSLKARMKAPNA---EPSVITYNCLLGGLCSSGRVNDAREVLV 174
+N +IDG CK G+M A L +M + P+ +TYN ++ G C +GR++ A +
Sbjct: 256 FNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRG 315
Query: 175 EMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAK 234
+M +G +ERTY AL++ + R G ++A
Sbjct: 316 DMVKSG-----------------------------VDCNERTYGALVDAYGRAGSSDEAL 346
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
+ ++ G+V + + YN +V EG +E A+ M + ++ T ++
Sbjct: 347 RLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGL 406
Query: 295 CETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNV 354
C G V +A + +++ EK + + +N+L++ + R +IL + +G+ +
Sbjct: 407 CRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDA 466
Query: 355 ISYGSLINCLCKDRKL 370
IS+G+LI+ K+ KL
Sbjct: 467 ISFGTLIDGYLKEGKL 482
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/444 (22%), Positives = 197/444 (44%), Gaps = 77/444 (17%)
Query: 2 RKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDL 61
R +G SV ++N L+ + ++ V+ +M G +V ++ + + L
Sbjct: 175 RAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKL 234
Query: 62 DKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDE--MLHRNLV-PNTVTY 118
+ + M K V P+V +N+++ G CK ++ A +L + M+ N V PN VTY
Sbjct: 235 FEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTY 294
Query: 119 NTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEG 178
N++I+G+CK G ++ A ++ M + + TY L+ +G ++A + EM
Sbjct: 295 NSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTS 354
Query: 179 NG---------------FLPG---GFSRIVFDDDSA----------------CSNGNGSL 204
G F+ G G ++ D +S C NG
Sbjct: 355 KGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKE 414
Query: 205 RANVAARIDERT-------YSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVN 257
+I E+ ++ L++ F R ++ A ++L ++ G+ IS+ L++
Sbjct: 415 AVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLID 474
Query: 258 AYCHEGYVEKAIQTAEQM-------------------EERGLKPS------------YVT 286
Y EG +E+A++ + M +RG+ + VT
Sbjct: 475 GYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVT 534
Query: 287 FNTLINKFCETGEVDQAERWVKKMLEKG--IAPTLETYNSLINGYGRISNFVKCFEILEE 344
+NTL+N+ +TG V++A+ + KM ++ + +L T+N +IN + ++ K E+L+
Sbjct: 535 YNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKF 594
Query: 345 IEKKGMKPNVISYGSLINCLCKDR 368
+ ++G+ P+ I+YG+LI K R
Sbjct: 595 MVERGVVPDSITYGTLITSFSKHR 618
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 134/291 (46%), Gaps = 14/291 (4%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G++ + N + L E ++V DM ++ D + V
Sbjct: 352 MTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGY 411
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ + E + ++++ + +N ++ + +++ A ++ ML + L + +++ T
Sbjct: 412 VKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGT 471
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LIDGY K G++E+A + M N +++ YN ++ GL G A V+ ME
Sbjct: 472 LIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKD 531
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDER---------TYSALLNGFCRVGRIE 231
+ ++ ++ + + GN ++ +++ ++ T++ ++N C+ G E
Sbjct: 532 IVT--YNTLL---NESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYE 586
Query: 232 KAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKP 282
KAKEVL +VE GVVP I+Y L+ ++ EK ++ + + +G+ P
Sbjct: 587 KAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTP 637
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 124/271 (45%), Gaps = 42/271 (15%)
Query: 147 EPSVITYNCLLGGLCSSGRVNDAREV---LVEMEGNGFLP-------------GGFSRIV 190
E S + + L+G S R +DA + L+ +EG P G S V
Sbjct: 95 EASCVMIHLLVG----SRRFDDALSIMANLMSVEGEKLSPLHVLSGLIRSYQACGSSPDV 150
Query: 191 FDDDSACSNGNGSLRANVAARIDERTYSALLNGFC--------------RVGRIEKAKEV 236
FD NG A A + E+T + GFC V I++ +V
Sbjct: 151 FDSLVRACTQNGD--AQGAYEVIEQTRA---EGFCVSVHALNNFMGCLLNVNEIDRFWKV 205
Query: 237 LAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCE 296
++ G V + ++N+++ ++C E + +A+ +M + G+ P+ V+FN +I+ C+
Sbjct: 206 YKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACK 265
Query: 297 TGEVDQAERWVKKM-LEKG--IAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPN 353
TG++ A + + KM + G ++P TYNS+ING+ + I ++ K G+ N
Sbjct: 266 TGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCN 325
Query: 354 VISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+YG+L++ + +A + +M S+G
Sbjct: 326 ERTYGALVDAYGRAGSSDEALRLCDEMTSKG 356
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 21/201 (10%)
Query: 201 NGSLRANVAARIDERTYSALLNGFCRVG--RIEKAKEVLAKL------------VENGVV 246
N LR+N A+ + R ++ + VG R + A ++A L V +G++
Sbjct: 79 NWVLRSNTVAKSENRFEASCVMIHLLVGSRRFDDALSIMANLMSVEGEKLSPLHVLSGLI 138
Query: 247 PSQIS-------YNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGE 299
S + ++ LV A G + A + EQ G S N + E
Sbjct: 139 RSYQACGSSPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNE 198
Query: 300 VDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGS 359
+D+ + K+M G + T+N +I + + S + + + K G+ PNV+S+
Sbjct: 199 IDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNM 258
Query: 360 LINCLCKDRKLLDAEIVLGDM 380
+I+ CK + A +LG M
Sbjct: 259 MIDGACKTGDMRFALQLLGKM 279
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 142/307 (46%), Gaps = 16/307 (5%)
Query: 42 RPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARK 101
+P+V Y V V D+DK M KER P V +N+++ G C+ + A
Sbjct: 190 KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALD 249
Query: 102 LFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLC 161
LF EM + PN V++NTLI G+ G++E+ + M S T L+ GLC
Sbjct: 250 LFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLC 309
Query: 162 SSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTY---- 217
GRV+DA +++++ LP FD S G +A A + E +
Sbjct: 310 REGRVDDACGLVLDLLNKRVLPSE-----FDYGSLVEKLCGENKAVRAMEMMEELWKKGQ 364
Query: 218 -------SALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQ 270
+ L+ G + GR EKA + K++ G++P +++N+L+ C + A +
Sbjct: 365 TPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANR 424
Query: 271 TAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYG 330
+G +P T++ L++ F + G + E V +ML+K + P + TYN L++G
Sbjct: 425 LRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLS 484
Query: 331 RISNFVK 337
F +
Sbjct: 485 CTGKFSR 491
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 140/306 (45%), Gaps = 34/306 (11%)
Query: 82 VYNLVLGGLCKVRRVKDARKLFDEMLHRNLV---PNTVTYNTLIDGYCKVGEMEKAFSLK 138
++ + C+ R++ A FD M + L+ PN YNT+++GY K G+M+KA
Sbjct: 159 IFRSAIDAYCRARKMDYALLAFDTM--KRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFY 216
Query: 139 ARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACS 198
RM A+P V T+N L+ G C S + + A ++ EM+ G P
Sbjct: 217 QRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEP--------------- 261
Query: 199 NGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNA 258
NV +++ L+ GF G+IE+ ++ +++E G S+ + ILV+
Sbjct: 262 --------NVV------SFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDG 307
Query: 259 YCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPT 318
C EG V+ A + + + PS + +L+ K C + +A ++++ +KG P
Sbjct: 308 LCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPC 367
Query: 319 LETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLG 378
+L+ G + K +E++ G+ P+ +++ L+ LC DA +
Sbjct: 368 FIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRL 427
Query: 379 DMASRG 384
+S+G
Sbjct: 428 LASSKG 433
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 127/269 (47%), Gaps = 18/269 (6%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K+ P V + N L S +F+ L +F +M E G P+VVS+ + +
Sbjct: 219 MGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGK 278
Query: 61 LDKGFEL------MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPN 114
+++G ++ +GC E +++ GLC+ RV DA L ++L++ ++P+
Sbjct: 279 IEEGVKMAYEMIELGCRFSEATC------EILVDGLCREGRVDDACGLVLDLLNKRVLPS 332
Query: 115 TVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLV 174
Y +L++ C + +A + + P I L+ GL SGR A +
Sbjct: 333 EFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFME 392
Query: 175 EMEGNGFLPGG--FSRIVFD----DDSACSNGNGSLRANVAARIDERTYSALLNGFCRVG 228
+M G LP F+ ++ D D S +N L ++ DE TY L++GF + G
Sbjct: 393 KMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEG 452
Query: 229 RIEKAKEVLAKLVENGVVPSQISYNILVN 257
R ++ + ++ ++++ ++P +YN L++
Sbjct: 453 RRKEGEVLVNEMLDKDMLPDIFTYNRLMD 481
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%)
Query: 6 VLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGF 65
VLPS L E L G + + + + ++ + G P ++ VE +K
Sbjct: 329 VLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKAS 388
Query: 66 ELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGY 125
M M + P +NL+L LC DA +L + P+ TY+ L+ G+
Sbjct: 389 GFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGF 448
Query: 126 CKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVN 167
K G ++ L M + P + TYN L+ GL +G+ +
Sbjct: 449 TKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFS 490
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 180/369 (48%), Gaps = 32/369 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
MRK +L +V + + +++ ++ + F M + + P++V++ + A K+
Sbjct: 160 MRKKKML-NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKN 218
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ K E+ M ++R P Y+++L G K + AR++F EM+ P+ VTY+
Sbjct: 219 VRKAQEVFENM-RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSI 277
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
++D CK G +++A + M +P+ Y+ L+ + R+ +A + +EME +G
Sbjct: 278 MVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSG 337
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
++A+VA +++L+ FC+ R++ VL ++
Sbjct: 338 -----------------------MKADVA------VFNSLIGAFCKANRMKNVYRVLKEM 368
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
GV P+ S NI++ G ++A +M + +P T+ +I FCE E+
Sbjct: 369 KSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEM 427
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
+ A++ K M +KG+ P++ T++ LING K +LEE+ + G++P+ +++G L
Sbjct: 428 ETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRL 487
Query: 361 INCLCKDRK 369
L K+ +
Sbjct: 488 RQLLIKEER 496
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 178/376 (47%), Gaps = 32/376 (8%)
Query: 9 SVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELM 68
SVR+ + + E+ +Q++ + + M + + +V ++ + + +D+
Sbjct: 133 SVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYARAQKVDEAIYAF 191
Query: 69 GCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKV 128
MEK + P++ +N +L LCK + V+ A+++F+ M R P++ TY+ L++G+ K
Sbjct: 192 NVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKE 250
Query: 129 GEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSR 188
+ KA + M P ++TY+ ++ LC +GRV++A ++ M+ + P F
Sbjct: 251 PNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTF-- 308
Query: 189 IVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPS 248
YS L++ + R+E+A + ++ +G+
Sbjct: 309 ---------------------------IYSVLVHTYGTENRLEEAVDTFLEMERSGMKAD 341
Query: 249 QISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVK 308
+N L+ A+C ++ + ++M+ +G+ P+ + N ++ E GE D+A +
Sbjct: 342 VAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFR 401
Query: 309 KMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDR 368
KM+ K P +TY +I + ++ + + KKG+ P++ ++ LIN LC++R
Sbjct: 402 KMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEER 460
Query: 369 KLLDAEIVLGDMASRG 384
A ++L +M G
Sbjct: 461 TTQKACVLLEEMIEMG 476
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 168/361 (46%), Gaps = 29/361 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K G+ P + + + L S + + V M + GI+ DVV ++ +
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ E++ M+ + P+V Y+ ++ GLCK R+ DA + EM + + PN +T++
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LID Y K G++ K S+ M + +P+V TY+ L+ GLC RV++A ++L M G
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P NV TYS L NGF + R++ ++L +
Sbjct: 184 CTP-----------------------NVV------TYSTLANGFFKSSRVDDGIKLLDDM 214
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+ GV + +S N L+ Y G ++ A+ M GL P+ ++N ++ GEV
Sbjct: 215 PQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEV 274
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
++A + M + + TY +I+G + + +++ +++ K ++P+ +Y +
Sbjct: 275 EKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIM 334
Query: 361 I 361
I
Sbjct: 335 I 335
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 144/302 (47%), Gaps = 6/302 (1%)
Query: 71 MEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGE 130
M K + P + + ++ G C +KDA + +M + + V LID CK
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 131 MEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG--GFSR 188
+ A + RMK P+V+TY+ L+ GLC SGR+ DA L EM+ P FS
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 189 IV--FDDDSACSNGNGSLRANVAARIDER--TYSALLNGFCRVGRIEKAKEVLAKLVENG 244
++ + S + + + ID TYS+L+ G C R+++A ++L ++ G
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
P+ ++Y+ L N + V+ I+ + M +RG+ + V+ NTLI + + G++D A
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLAL 243
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
M G+ P + +YN ++ G K E ++K ++I+Y +I+ +
Sbjct: 244 GVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGM 303
Query: 365 CK 366
CK
Sbjct: 304 CK 305
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 134/280 (47%), Gaps = 29/280 (10%)
Query: 105 EMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSG 164
+M+ + P+ VT ++L++G+C ++ A + +M+ + V+ L+ LC +
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 165 RVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGF 224
V A EVL M+ G P NV TYS+L+ G
Sbjct: 63 LVVPALEVLKRMKDRGISP-----------------------NVV------TYSSLITGL 93
Query: 225 CRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSY 284
C+ GR+ A+ L ++ + P+ I+++ L++AY G + K + M + + P+
Sbjct: 94 CKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNV 153
Query: 285 VTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEE 344
T+++LI C VD+A + + M+ KG P + TY++L NG+ + S ++L++
Sbjct: 154 FTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDD 213
Query: 345 IEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ ++G+ N +S +LI + K+ A V G M S G
Sbjct: 214 MPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNG 253
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 74/134 (55%)
Query: 237 LAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCE 296
+ K+++ G+ P ++ + LVN +C ++ A+ A QME+ G+K V LI+ C+
Sbjct: 1 MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK 60
Query: 297 TGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVIS 356
V A +K+M ++GI+P + TY+SLI G + L E++ K + PNVI+
Sbjct: 61 NRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVIT 120
Query: 357 YGSLINCLCKDRKL 370
+ +LI+ K KL
Sbjct: 121 FSALIDAYAKRGKL 134
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G P+V + + L S + + + + DM + G+ + VS ++
Sbjct: 179 MISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGK 238
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D + G M + P++ YN+VL GL V+ A F+ M + +TY
Sbjct: 239 IDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTI 298
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDA 169
+I G CK +++A+ L ++K EP Y ++ L +G +A
Sbjct: 299 MIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA 347
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 63/137 (45%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + GV + S N L + + + + L VF M +G+ P++ SY + +
Sbjct: 214 MPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGE 273
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
++K M+K R + Y +++ G+CK VK+A LF ++ + + P+ Y
Sbjct: 274 VEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTI 333
Query: 121 LIDGYCKVGEMEKAFSL 137
+I + G +A +L
Sbjct: 334 MIAELNRAGMRTEADAL 350
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 184/430 (42%), Gaps = 71/430 (16%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPD-------VVSYGKAVE 53
MR+ G+ + + L L K E L+++ ++ SGI PD + S+ + E
Sbjct: 309 MRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESE 368
Query: 54 AA----VMLKDLDK------------GF--------------ELMGCMEKERVG------ 77
+ V++ D+DK GF LMG E + V
Sbjct: 369 LSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLL 428
Query: 78 --------PSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVG 129
P ++V+ L K +V A L +++ L+P + YN +I+G CK G
Sbjct: 429 KDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEG 488
Query: 130 EMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRI 189
E++ L MK EPS T NC+ G L A ++L +M GF P
Sbjct: 489 RSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEP-WIKHT 547
Query: 190 VFDDDSACSNGNGSLRANVAARIDE----------RTYSALLNGFCRVGRIEKAKEVLAK 239
F C NG + +D+ +A ++G + +++ E+
Sbjct: 548 TFLVKKLCENGRA---VDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRD 604
Query: 240 LVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGE 299
+ NG P I+Y++L+ A C +A +M +GLKP+ T+N++I+ +C+ GE
Sbjct: 605 ICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGE 664
Query: 300 VDQAERWVKKMLEKGIAPTLETYNSLINGY---GRISNFVKCFEILEEIEKKGMKPNVIS 356
+D+ + +M E P + TY SLI+G GR S + + E++ K PN I+
Sbjct: 665 IDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRW---NEMKGKDCYPNRIT 721
Query: 357 YGSLINCLCK 366
+ +LI LCK
Sbjct: 722 FMALIQGLCK 731
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 166/404 (41%), Gaps = 74/404 (18%)
Query: 13 VNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCME 72
++R+ E ++G + V+ ++ + E IR D+V EA +++L +E G E
Sbjct: 369 LSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVH-----EAYSFIQNLMGNYESDGVSE 423
Query: 73 --------KERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
+ + P ++V+ L K +V A L +++ L+P + YN +I+G
Sbjct: 424 IVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEG 483
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLG-------------------------- 158
CK G E++ L MK EPS T NC+ G
Sbjct: 484 MCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPW 543
Query: 159 ---------GLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDD--------------- 194
LC +GR DA + L ++ G GFL + D
Sbjct: 544 IKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFR 603
Query: 195 SACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNI 254
C+NG+ D Y L+ C+ R +A + ++V G+ P+ +YN
Sbjct: 604 DICANGHCP---------DVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNS 654
Query: 255 LVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQA-ERWVKKMLEK 313
+++ +C EG +++ + +M E P +T+ +LI+ C +G +A RW +M K
Sbjct: 655 MIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRW-NEMKGK 713
Query: 314 GIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISY 357
P T+ +LI G + + E+E+K M+P+ Y
Sbjct: 714 DCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/441 (21%), Positives = 186/441 (42%), Gaps = 58/441 (13%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
MR G ++ + + + + E+ L+VF +++ G + +S V +
Sbjct: 205 MRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHISTILVV-SFCKWGQ 263
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+DK FEL+ +E+ + + Y +++ G K R+ A +LF++M + + Y+
Sbjct: 264 VDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDV 323
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVE----- 175
LI G CK ++E A SL +K P LL ++ EV++
Sbjct: 324 LIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKK 383
Query: 176 --MEGNGFLPGGFSR--IVFDDDSACSNGNGSLRANVAARI-------------DERTYS 218
M L GF R +V + S N G+ ++ + I D + S
Sbjct: 384 SVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLS 443
Query: 219 ALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEER 278
++N + +++ A +L +V+NG++P + YN ++ C EG E++++ +M++
Sbjct: 444 IVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDA 503
Query: 279 GLKPSYVTFNT-----------------------------------LINKFCETGEVDQA 303
G++PS T N L+ K CE G A
Sbjct: 504 GVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDA 563
Query: 304 ERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINC 363
+++ + +G + + I+G + + E+ +I G P+VI+Y LI
Sbjct: 564 CKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKA 623
Query: 364 LCKDRKLLDAEIVLGDMASRG 384
LCK + ++A+I+ +M S+G
Sbjct: 624 LCKACRTMEADILFNEMVSKG 644
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 127/291 (43%), Gaps = 29/291 (9%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
MR G P ++ L + L + + D+ G +V+ A++ + +
Sbjct: 535 MRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEG 594
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D+G EL + P V Y++++ LCK R +A LF+EM+ + L P TYN+
Sbjct: 595 VDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNS 654
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+IDG+CK GE+++ S RM P VITY L+ GLC+SGR ++A EM+G
Sbjct: 655 MIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKD 714
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P +RI T+ AL+ G C+ G +A ++
Sbjct: 715 CYP---NRI--------------------------TFMALIQGLCKCGWSGEALVYFREM 745
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLI 291
E + P Y LV+++ + +M +G P V N ++
Sbjct: 746 EEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYML 796
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 161/372 (43%), Gaps = 39/372 (10%)
Query: 23 SKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMG--------CMEKE 74
SK + ++ +FT S P+++ + V+ L+ GF+ G ++E
Sbjct: 42 SKLAQNLIVIFTRQPFSPDDPELLILSPELNTKVVETVLN-GFKRWGLAYLFFNWASKQE 100
Query: 75 RVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKA 134
++ YN + L + R+ + L ++L+ + + I G +++A
Sbjct: 101 GYRNDMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEA 160
Query: 135 FSLKARMKAPN-AEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDD 193
S+ R++ P+ TYNCLL + S N + LVE GF
Sbjct: 161 SSVFDRVREMGLCVPNAYTYNCLLEAISKS---NSSSVELVEARLKEMRDCGF------- 210
Query: 194 DSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYN 253
D+ T + +L +C G+ E+A V +++ G + IS
Sbjct: 211 -----------------HFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-T 252
Query: 254 ILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK 313
ILV ++C G V+KA + E +EER ++ +Y T+ LI+ F + +D+A + +KM
Sbjct: 253 ILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRM 312
Query: 314 GIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLD- 372
G+ + Y+ LI G + + + EI++ G+ P+ G L+ ++ +L
Sbjct: 313 GMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRI 372
Query: 373 AEIVLGDMASRG 384
E+++GD+ +
Sbjct: 373 TEVIIGDIDKKS 384
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 153/312 (49%), Gaps = 12/312 (3%)
Query: 82 VYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARM 141
Y ++G L + ++ KL DEM+ PNTVTYN LI Y + + +A ++ +M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 142 KAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGN 201
+ +P +TY L+ +G ++ A ++ M+ G P F+ V + C
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN---CLGKA 482
Query: 202 GSLRAN---VAARIDER------TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISY 252
G L A +D+ TY+ +++ + + A ++ + G P +++Y
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 253 NILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLE 312
+I++ H GY+E+A +M+++ P + L++ + + G V++A +W + ML
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 313 KGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLD 372
G+ P + T NSL++ + R++ + +E+L+ + G++P++ +Y L++C R LD
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLD 662
Query: 373 AEIVLGDMASRG 384
MAS G
Sbjct: 663 MGFCGQLMASTG 674
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 141/296 (47%), Gaps = 6/296 (2%)
Query: 38 ESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVK 97
+ G + D +Y V K +L+ M ++ P+ YN ++ + +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 98 DARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLL 157
+A +F++M P+ VTY TLID + K G ++ A + RM+A P TY+ ++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 158 GGLCSSGRVNDAREVLVEMEGNGFLPGGFS-RIVFDDDSACSNGNGSLR-----ANVAAR 211
L +G + A ++ EM G P + I+ D + N +L+ N
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 212 IDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQT 271
D+ TYS ++ G +E+A+ V ++ + +P + Y +LV+ + G VEKA Q
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 272 AEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLIN 327
+ M GL+P+ T N+L++ F ++ +A ++ ML G+ P+L+TY L++
Sbjct: 597 YQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 133/298 (44%), Gaps = 30/298 (10%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M +DG P+ + NRL + + + + VF M E+G +PD V+Y ++
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
LD ++ M+ + P F Y++++ L K + A KLF EM+ + PN VTYN
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
++D + K + A L M+ EP +TY+ ++ L G + +A V EM+
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
++P DE Y L++ + + G +EKA + +
Sbjct: 570 WIP-----------------------------DEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETG 298
+ G+ P+ + N L++ + + +A + + M GL+PS T+ TL+ C G
Sbjct: 601 LHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY-TLLLSCCTDG 657
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 94/181 (51%)
Query: 204 LRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEG 263
L+ + D TY+ ++ R + ++L ++V +G P+ ++YN L+++Y
Sbjct: 354 LKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRAN 413
Query: 264 YVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYN 323
Y+ +A+ QM+E G KP VT+ TLI+ + G +D A ++M G++P TY+
Sbjct: 414 YLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYS 473
Query: 324 SLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
+IN G+ + ++ E+ +G PN+++Y +++ K R +A + DM +
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 384 G 384
G
Sbjct: 534 G 534
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 153/312 (49%), Gaps = 12/312 (3%)
Query: 82 VYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARM 141
Y ++G L + ++ KL DEM+ PNTVTYN LI Y + + +A ++ +M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 142 KAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGN 201
+ +P +TY L+ +G ++ A ++ M+ G P F+ V + C
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN---CLGKA 482
Query: 202 GSLRAN---VAARIDER------TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISY 252
G L A +D+ TY+ +++ + + A ++ + G P +++Y
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 253 NILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLE 312
+I++ H GY+E+A +M+++ P + L++ + + G V++A +W + ML
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 313 KGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLD 372
G+ P + T NSL++ + R++ + +E+L+ + G++P++ +Y L++C R LD
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLD 662
Query: 373 AEIVLGDMASRG 384
MAS G
Sbjct: 663 MGFCGQLMASTG 674
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 141/296 (47%), Gaps = 6/296 (2%)
Query: 38 ESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVK 97
+ G + D +Y V K +L+ M ++ P+ YN ++ + +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 98 DARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLL 157
+A +F++M P+ VTY TLID + K G ++ A + RM+A P TY+ ++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 158 GGLCSSGRVNDAREVLVEMEGNGFLPGGFS-RIVFDDDSACSNGNGSLR-----ANVAAR 211
L +G + A ++ EM G P + I+ D + N +L+ N
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 212 IDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQT 271
D+ TYS ++ G +E+A+ V ++ + +P + Y +LV+ + G VEKA Q
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 272 AEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLIN 327
+ M GL+P+ T N+L++ F ++ +A ++ ML G+ P+L+TY L++
Sbjct: 597 YQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 133/298 (44%), Gaps = 30/298 (10%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M +DG P+ + NRL + + + + VF M E+G +PD V+Y ++
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
LD ++ M+ + P F Y++++ L K + A KLF EM+ + PN VTYN
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
++D + K + A L M+ EP +TY+ ++ L G + +A V EM+
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
++P DE Y L++ + + G +EKA + +
Sbjct: 570 WIP-----------------------------DEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETG 298
+ G+ P+ + N L++ + + +A + + M GL+PS T+ TL+ C G
Sbjct: 601 LHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY-TLLLSCCTDG 657
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 94/181 (51%)
Query: 204 LRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEG 263
L+ + D TY+ ++ R + ++L ++V +G P+ ++YN L+++Y
Sbjct: 354 LKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRAN 413
Query: 264 YVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYN 323
Y+ +A+ QM+E G KP VT+ TLI+ + G +D A ++M G++P TY+
Sbjct: 414 YLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYS 473
Query: 324 SLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
+IN G+ + ++ E+ +G PN+++Y +++ K R +A + DM +
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 384 G 384
G
Sbjct: 534 G 534
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 153/312 (49%), Gaps = 12/312 (3%)
Query: 82 VYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARM 141
Y ++G L + ++ KL DEM+ PNTVTYN LI Y + + +A ++ +M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 142 KAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGN 201
+ +P +TY L+ +G ++ A ++ M+ G P F+ V + C
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN---CLGKA 482
Query: 202 GSLRAN---VAARIDER------TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISY 252
G L A +D+ TY+ +++ + + A ++ + G P +++Y
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 253 NILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLE 312
+I++ H GY+E+A +M+++ P + L++ + + G V++A +W + ML
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 313 KGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLD 372
G+ P + T NSL++ + R++ + +E+L+ + G++P++ +Y L++C R LD
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLD 662
Query: 373 AEIVLGDMASRG 384
MAS G
Sbjct: 663 MGFCGQLMASTG 674
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 141/296 (47%), Gaps = 6/296 (2%)
Query: 38 ESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVK 97
+ G + D +Y V K +L+ M ++ P+ YN ++ + +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 98 DARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLL 157
+A +F++M P+ VTY TLID + K G ++ A + RM+A P TY+ ++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 158 GGLCSSGRVNDAREVLVEMEGNGFLPGGFS-RIVFDDDSACSNGNGSLR-----ANVAAR 211
L +G + A ++ EM G P + I+ D + N +L+ N
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 212 IDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQT 271
D+ TYS ++ G +E+A+ V ++ + +P + Y +LV+ + G VEKA Q
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 272 AEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLIN 327
+ M GL+P+ T N+L++ F ++ +A ++ ML G+ P+L+TY L++
Sbjct: 597 YQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 133/298 (44%), Gaps = 30/298 (10%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M +DG P+ + NRL + + + + VF M E+G +PD V+Y ++
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
LD ++ M+ + P F Y++++ L K + A KLF EM+ + PN VTYN
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
++D + K + A L M+ EP +TY+ ++ L G + +A V EM+
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
++P DE Y L++ + + G +EKA + +
Sbjct: 570 WIP-----------------------------DEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETG 298
+ G+ P+ + N L++ + + +A + + M GL+PS T+ TL+ C G
Sbjct: 601 LHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY-TLLLSCCTDG 657
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 94/181 (51%)
Query: 204 LRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEG 263
L+ + D TY+ ++ R + ++L ++V +G P+ ++YN L+++Y
Sbjct: 354 LKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRAN 413
Query: 264 YVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYN 323
Y+ +A+ QM+E G KP VT+ TLI+ + G +D A ++M G++P TY+
Sbjct: 414 YLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYS 473
Query: 324 SLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
+IN G+ + ++ E+ +G PN+++Y +++ K R +A + DM +
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 384 G 384
G
Sbjct: 534 G 534
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 176/377 (46%), Gaps = 41/377 (10%)
Query: 14 NRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEK 73
N + S E + M E G+ P +Y ++ + ++ EL+ M +
Sbjct: 119 NAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLE 178
Query: 74 E---RVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGE 130
E VGP++ +N+++ CK ++V++A ++ +M + P+TVTYNT+ Y + GE
Sbjct: 179 EGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGE 238
Query: 131 MEKAFS--LKARMKAPNAEPSVITYNCLLGGLCSSGRVNDA-------REVLVEMEGNGF 181
+A S ++ + A+P+ T ++GG C GRV D +E+ VE F
Sbjct: 239 TVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVF 298
Query: 182 --LPGGFSRIVFDD--DSACSN-------------GNGSLRANVAA-------RIDERTY 217
L GF ++ D D GN ++ V + D TY
Sbjct: 299 NSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITY 358
Query: 218 SALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQM-- 275
S ++N + G +EKA +V ++V+ GV P +Y+IL Y +KA + E +
Sbjct: 359 STVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIV 418
Query: 276 EERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNF 335
E R P+ V F T+I+ +C G +D A R KM + G++P ++T+ +L+ GY +
Sbjct: 419 ESR---PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQP 475
Query: 336 VKCFEILEEIEKKGMKP 352
K E+L+ + G+KP
Sbjct: 476 WKAEEVLQMMRGCGVKP 492
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 183/415 (44%), Gaps = 43/415 (10%)
Query: 9 SVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELM 68
+VRS +L L+ + + VF + E+G RP ++SY + A + K ++
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIV 103
Query: 69 GCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKV 128
+E+ +N V+ + ++DA + +M L P T TYNTLI GY
Sbjct: 104 SEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIA 163
Query: 129 GEMEKAFSLKARMKAP---NAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGG 185
G+ E++ L M + P++ T+N L+ C +V +A EV+ +ME G P
Sbjct: 164 GKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRP-- 221
Query: 186 FSRIVFDDDSACSNGNG-SLRANV----------AARIDERTYSALLNGFCRVGRIEKAK 234
+ ++ + C G ++RA A+ + RT ++ G+CR GR+
Sbjct: 222 -DTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGL 280
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCH-------------------------EGYVEKAI 269
+ ++ E V + + +N L+N + G + +
Sbjct: 281 RFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKV 340
Query: 270 QTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGY 329
Q M+E +K +T++T++N + G +++A + K+M++ G+ P Y+ L GY
Sbjct: 341 QVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGY 400
Query: 330 GRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
R K E+LE + + +PNV+ + ++I+ C + + DA V M G
Sbjct: 401 VRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFG 454
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 169/406 (41%), Gaps = 71/406 (17%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKA----VEAAVMLKDLDK 63
P++R+ N L + K+ E+ V M E G+RPD V+Y V+ ++ +
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 64 GFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLID 123
E M + KE+ P+ +V+GG C+ RV+D + M + N V +N+LI+
Sbjct: 246 VVEKM--VMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLIN 303
Query: 124 GYCKV-------------------------GEMEKAFSLKARMKAPNAEPSVITYNCLLG 158
G+ +V G + + MK N + VITY+ ++
Sbjct: 304 GFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMN 363
Query: 159 GLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYS 218
S+G + A +V EM G P D YS
Sbjct: 364 AWSSAGYMEKAAQVFKEMVKAGVKP-----------------------------DAHAYS 394
Query: 219 ALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEER 278
L G+ R +KA+E+L L+ P+ + + +++ +C G ++ A++ +M +
Sbjct: 395 ILAKGYVRAKEPKKAEELLETLIVESR-PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKF 453
Query: 279 GLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGY--------- 329
G+ P+ TF TL+ + E + +AE ++ M G+ P T+ L +
Sbjct: 454 GVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDES 513
Query: 330 GRISNFVKCFEI-LEEIEKKGMKPNVISYGSLINCLCKDRKLLDAE 374
+ N +KC +I + ++EK K + S +L+ R+L A+
Sbjct: 514 NKAINALKCKDIEIAKLEKLYQKQSSGSSFNLLQIPVGKRELPTAK 559
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 160/374 (42%), Gaps = 12/374 (3%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G+ P+ + N L F +V M E G PD+V+Y V +
Sbjct: 227 MCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGR 286
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L + F L M + RV P + Y ++ GLCK RV++A + F M+ R + P+ ++YNT
Sbjct: 287 LKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNT 346
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI YCK G M+++ L M + P T ++ G GR+ A +VE+
Sbjct: 347 LIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLK 406
Query: 181 F-LPGGFSRIVFDDDSACSNGNGSLRANVAARIDE--------RTYSALLNGFCRVGRIE 231
+P F F S C G ++ RI E TY+ L+ R IE
Sbjct: 407 VDIP--FEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIE 464
Query: 232 KAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLI 291
+A + KL V +Y L+ C G +A +M + +KP L+
Sbjct: 465 EALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALV 524
Query: 292 NKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRI-SNFVKCFEILEEIEKKGM 350
+C+ + D+AER + + E+YNSL+ + K E+ E +++ G
Sbjct: 525 YGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGF 584
Query: 351 KPNVISYGSLINCL 364
PN ++ LI L
Sbjct: 585 VPNRLTCKYLIQVL 598
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 164/355 (46%), Gaps = 30/355 (8%)
Query: 27 EKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLV 86
E+ VF ++++SG VV+ + + L ++ +++ M + + P+ + +N++
Sbjct: 183 EEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNIL 242
Query: 87 LGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNA 146
C ++ ++M P+ VTYNTL+ YC+ G +++AF L M
Sbjct: 243 TNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRV 302
Query: 147 EPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRA 206
P ++TY L+ GLC GRV +A + M G P
Sbjct: 303 VPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKP----------------------- 339
Query: 207 NVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVE 266
D +Y+ L+ +C+ G ++++K++L +++ N VVP + + ++V + EG +
Sbjct: 340 ------DCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLL 393
Query: 267 KAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKML-EKGIAPTLETYNSL 325
A+ ++ + + + LI C+ G+ A+ + +++ E+G ETYN+L
Sbjct: 394 SAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNL 453
Query: 326 INGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDM 380
I R + + +++ + + +Y +LI CLC+ + +AE ++ +M
Sbjct: 454 IESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEM 508
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 116/260 (44%), Gaps = 29/260 (11%)
Query: 114 NTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVL 173
+ V ++ L+ GY K+G +E+ F + + SV+T N LL GL + D +V
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 174 VEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKA 233
M G P + T++ L N FC +
Sbjct: 225 SVMCRVGIHPNTY-----------------------------TFNILTNVFCNDSNFREV 255
Query: 234 KEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINK 293
+ L K+ E G P ++YN LV++YC G +++A + M R + P VT+ +LI
Sbjct: 256 DDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKG 315
Query: 294 FCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPN 353
C+ G V +A + +M+++GI P +YN+LI Y + + ++L E+ + P+
Sbjct: 316 LCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPD 375
Query: 354 VISYGSLINCLCKDRKLLDA 373
+ ++ ++ +LL A
Sbjct: 376 RFTCKVIVEGFVREGRLLSA 395
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 90/172 (52%)
Query: 213 DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTA 272
D + L+ G+ ++G +E+ V +++++G S ++ N L+N +E Q
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 273 EQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRI 332
M G+ P+ TFN L N FC + + +++KM E+G P L TYN+L++ Y R
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 333 SNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ F + + + ++ + P++++Y SLI LCKD ++ +A M RG
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRG 336
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 144/296 (48%), Gaps = 30/296 (10%)
Query: 69 GCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKV 128
G M+ V PSV ++N++L G + R++K A KL++EM N+ P VTY TLI+GYC++
Sbjct: 240 GTMDSNWV-PSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRM 298
Query: 129 GEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSR 188
++ A + MK E + + +N ++ GL +GR+++A G R
Sbjct: 299 RRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEAL-------------GMMER 345
Query: 189 IVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPS 248
C +G + TY++L+ FC+ G + A ++L ++ GV P+
Sbjct: 346 FF-----VCESGPTIV-----------TYNSLVKNFCKAGDLPGASKILKMMMTRGVDPT 389
Query: 249 QISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVK 308
+YN + E+ + ++ E G P +T++ ++ CE G++ A + K
Sbjct: 390 TTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNK 449
Query: 309 KMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
+M +GI P L T LI+ R+ + FE + ++G+ P I++ + N L
Sbjct: 450 EMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGL 505
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 170/383 (44%), Gaps = 43/383 (11%)
Query: 16 LFETLVGS----KQFEKVLAVFTDMVESGIRPDVVSYGKAV------EAAVMLKDLDKGF 65
LF+++V S ++FE ++ D V S ++VS + A M++ + F
Sbjct: 137 LFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAF 196
Query: 66 ELMGCMEKE-RVGPSVFVYNLVLGGLCKVRRVKDARKLFDEM---LHRNLVPNTVTYNTL 121
E E + + + ++L LCK V++A + + + N VP+ +N L
Sbjct: 197 EFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNIL 256
Query: 122 IDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGF 181
++G+ + ++++A L MKA N +P+V+TY L+ G C RV A EVL EM+
Sbjct: 257 LNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKM--- 313
Query: 182 LPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLV 241
I+ ++ +++G GR+ +A ++ +
Sbjct: 314 --------------------------AEMEINFMVFNPIIDGLGEAGRLSEALGMMERFF 347
Query: 242 ENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVD 301
P+ ++YN LV +C G + A + + M RG+ P+ T+N F + + +
Sbjct: 348 VCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTE 407
Query: 302 QAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
+ K++E G +P TY+ ++ ++ +E++ +G+ P++++ LI
Sbjct: 408 EGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLI 467
Query: 362 NCLCKDRKLLDAEIVLGDMASRG 384
+ LC+ L +A + RG
Sbjct: 468 HLLCRLEMLEEAFEEFDNAVRRG 490
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 125/299 (41%), Gaps = 29/299 (9%)
Query: 7 LPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFE 66
+PSVR N L S++ ++ ++ +M ++P VV+YG +E ++ + E
Sbjct: 247 VPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAME 306
Query: 67 LMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYC 126
++ M+ + + V+N ++ GL + R+ +A + + P VTYN+L+ +C
Sbjct: 307 VLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFC 366
Query: 127 KVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGF 186
K G++ A + M +P+ TYN + + + ++ G P
Sbjct: 367 KAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSP--- 423
Query: 187 SRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVV 246
D TY +L C G++ A +V ++ G+
Sbjct: 424 --------------------------DRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGID 457
Query: 247 PSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAER 305
P ++ +L++ C +E+A + + RG+ P Y+TF + N G D A+R
Sbjct: 458 PDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKR 516
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 169/374 (45%), Gaps = 39/374 (10%)
Query: 38 ESGIRPDV----VSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKV 93
E+GI P V + + + ++L + K E+ + PS+F + V+ LCK
Sbjct: 94 ETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFT---LSPSLF--DSVVNSLCKA 148
Query: 94 RRVKDARKLFDEMLHRNLVPNTVTYNT---LIDGYCKVGEMEKAFSLKARMKAPNAEP-- 148
R + A L + + + N V+ +T LI Y + G +++A ++A A + EP
Sbjct: 149 REFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQA--IRAFEFARSYEPVC 206
Query: 149 ----SVITYNCLLGGLCSSGRVNDAREVLVEMEG-------------NGFLPGGF-SRIV 190
+ LL LC G V +A L + G N L G F SR +
Sbjct: 207 KSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKL 266
Query: 191 FDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQI 250
+ NV + TY L+ G+CR+ R++ A EVL ++ + + +
Sbjct: 267 KQAEKLWEEMKA---MNVKPTV--VTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFM 321
Query: 251 SYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKM 310
+N +++ G + +A+ E+ P+ VT+N+L+ FC+ G++ A + +K M
Sbjct: 322 VFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMM 381
Query: 311 LEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKL 370
+ +G+ PT TYN + + + + + ++ + G P+ ++Y ++ LC+D KL
Sbjct: 382 MTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKL 441
Query: 371 LDAEIVLGDMASRG 384
A V +M +RG
Sbjct: 442 SLAMQVNKEMKNRG 455
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 73/154 (47%), Gaps = 1/154 (0%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M GV P+ + N F+ + E+ + ++ ++E+G PD ++Y ++
Sbjct: 381 MMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGK 440
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L ++ M+ + P + +++ LC++ +++A + FD + R ++P +T+
Sbjct: 441 LSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKM 500
Query: 121 LIDGYCKVGEMEKAFSLKARMKA-PNAEPSVITY 153
+ +G G + A L + M + P+++ TY
Sbjct: 501 IDNGLRSKGMSDMAKRLSSLMSSLPHSKKLPNTY 534
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 179/381 (46%), Gaps = 43/381 (11%)
Query: 10 VRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG----- 64
VR N L S++++ V+ M + + PD V+ A+++ L K
Sbjct: 273 VRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVT------CAILITTLRKAGRSAK 326
Query: 65 --FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLI 122
+E+ M ++ V S V+ ++ C ++A + EM + + NT+ YNTL+
Sbjct: 327 EVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLM 386
Query: 123 DGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFL 182
D Y K +E+ L M+ +PS TYN L+ + + +L EME G
Sbjct: 387 DAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLE 446
Query: 183 PGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRI-EKAKEVLAKLV 241
P NV ++Y+ L++ + R ++ + A + ++
Sbjct: 447 P-----------------------NV------KSYTCLISAYGRTKKMSDMAADAFLRMK 477
Query: 242 ENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVD 301
+ G+ PS SY L++AY G+ EKA + E+M + G+KPS T+ ++++ F +G+
Sbjct: 478 KVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTG 537
Query: 302 QAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
+ K ML + I T TYN+L++G+ + +++ +++ E K G++P+V++Y L+
Sbjct: 538 KLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLM 597
Query: 362 NCLCKDRKLLDAEIVLGDMAS 382
N + + +L +MA+
Sbjct: 598 NAYARGGQDAKLPQLLKEMAA 618
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 172/369 (46%), Gaps = 14/369 (3%)
Query: 27 EKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLV 86
++V +F M E G++ +G V++ ++ + MEK+ + + VYN +
Sbjct: 326 KEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTL 385
Query: 87 LGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNA 146
+ K +++ LF EM + L P+ TYN L+D Y + + + +L M+
Sbjct: 386 MDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGL 445
Query: 147 EPSVITYNCLLGGLCSSGRVND-AREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLR 205
EP+V +Y CL+ + +++D A + + M+ G P S + S +
Sbjct: 446 EPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAY 505
Query: 206 ANVAARIDE------RTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAY 259
A+ E TY+++L+ F R G K E+ ++ + ++I+YN L++ +
Sbjct: 506 ASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGF 565
Query: 260 CHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTL 319
+G +A + + GL+PS +T+N L+N + G+ + + +K+M + P
Sbjct: 566 AKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDS 625
Query: 320 ETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL-----CKDRKLLDAE 374
TY+++I + R+ +F + F + + K G P+ SY L L K+RK D
Sbjct: 626 ITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKAKTKNRK--DKT 683
Query: 375 IVLGDMASR 383
+LG + S+
Sbjct: 684 AILGIINSK 692
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 174/387 (44%), Gaps = 37/387 (9%)
Query: 3 KDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLD 62
++ L S R+ + LF L + + +L + +++ + DV Y A+ + D
Sbjct: 231 QEPSLASPRACSVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYD 290
Query: 63 KGFELMGCMEKERVGPSVFVYNLVLGGLCKV-RRVKDARKLFDEMLHRNLVPNTVTYNTL 121
+E+ M+K V P +++ L K R K+ ++F++M + + + + L
Sbjct: 291 DAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGL 350
Query: 122 IDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGF 181
+ +C G E+A ++ M+ + I YN L+ S + + + EM G
Sbjct: 351 VKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGL 410
Query: 182 LPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLV 241
P TY+ L++ + R + + + +L ++
Sbjct: 411 KPSA-----------------------------ATYNILMDAYARRMQPDIVETLLREME 441
Query: 242 ENGVVPSQISYNILVNAYCHEGYVEKAIQTAE----QMEERGLKPSYVTFNTLINKFCET 297
+ G+ P+ SY L++AY G +K A +M++ GLKPS ++ LI+ + +
Sbjct: 442 DLGLEPNVKSYTCLISAY---GRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVS 498
Query: 298 GEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISY 357
G ++A ++M ++GI P++ETY S+++ + R + K EI + + ++ +K I+Y
Sbjct: 499 GWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITY 558
Query: 358 GSLINCLCKDRKLLDAEIVLGDMASRG 384
+L++ K ++A V+ + + G
Sbjct: 559 NTLLDGFAKQGLYIEARDVVSEFSKMG 585
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 91/206 (44%), Gaps = 10/206 (4%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+K G+ PS S L S EK A F +M + GI+P V +Y ++A D
Sbjct: 476 MKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGD 535
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
K E+ M +E++ + YN +L G K +AR + E L P+ +TYN
Sbjct: 536 TGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNM 595
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVE---ME 177
L++ Y + G+ K L M A N +P ITY+ ++ RV D + M
Sbjct: 596 LMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFV---RVRDFKRAFFYHKMMV 652
Query: 178 GNGFLPGGFS----RIVFDDDSACSN 199
+G +P S R + +D + N
Sbjct: 653 KSGQVPDPRSYEKLRAILEDKAKTKN 678
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 162/361 (44%), Gaps = 33/361 (9%)
Query: 9 SVRSVNRLFETLVG----SKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
+VR LF L+ + +K + VF + + S + V +L+K
Sbjct: 111 NVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKA 170
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
+ R+ P+ +N+++ G + A K+FDEML + P+ VTYN+LI
Sbjct: 171 KSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGF 230
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
C+ +M KA SL M P+ +T+ L+ GLC G N+A++++ +ME G PG
Sbjct: 231 LCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPG 290
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
+ Y L++ + GRI++AK +L ++ +
Sbjct: 291 LVN-----------------------------YGILMSDLGKRGRIDEAKLLLGEMKKRR 321
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
+ P + YNILVN C E V +A + +M+ +G KP+ T+ +I+ FC + D
Sbjct: 322 IKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGL 381
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
+ ML PT T+ ++ G + N +LE + KK + ++ +L++ L
Sbjct: 382 NVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDL 441
Query: 365 C 365
C
Sbjct: 442 C 442
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 125/288 (43%), Gaps = 29/288 (10%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P+ S N L + + +E VF +M+E ++P VV+Y + D+ K L
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSL 243
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
+ M K+R+ P+ + L++ GLC +A+KL +M +R P V Y L+ K
Sbjct: 244 LEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGK 303
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
G +++A L MK +P V+ YN L+ LC+ RV +A VL EM+ G P
Sbjct: 304 RGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKP---- 359
Query: 188 RIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVP 247
N A TY +++GFCR+ + VL ++ + P
Sbjct: 360 -------------------NAA------TYRMMIDGFCRIEDFDSGLNVLNAMLASRHCP 394
Query: 248 SQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFC 295
+ ++ +V G ++ A E M ++ L + L++ C
Sbjct: 395 TPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 148/340 (43%), Gaps = 29/340 (8%)
Query: 27 EKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLV 86
E+ L++F E G R D SY + ++ D +++ + V ++ +
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 87 LGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNA 146
+ K V A +F ++ + V + NTLI+ GE+EKA S K
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 147 EPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRA 206
P+ +++N L+ G D ++AC + L
Sbjct: 183 RPNSVSFNILIKGFLDKC---------------------------DWEAACKVFDEMLEM 215
Query: 207 NVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVE 266
V + TY++L+ CR + KAK +L +++ + P+ +++ +L+ C +G
Sbjct: 216 EVQPSV--VTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYN 273
Query: 267 KAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLI 326
+A + ME RG KP V + L++ + G +D+A+ + +M ++ I P + YN L+
Sbjct: 274 EAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILV 333
Query: 327 NGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCK 366
N + + +L E++ KG KPN +Y +I+ C+
Sbjct: 334 NHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCR 373
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 139/302 (46%), Gaps = 29/302 (9%)
Query: 83 YNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMK 142
Y+ ++ L K R ++ + +RN+ + LI Y K G ++KA + ++
Sbjct: 84 YSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKIT 143
Query: 143 APNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNG 202
+ + ++ + N L+ L +G + A+ F G
Sbjct: 144 SFDCVRTIQSLNTLINVLVDNGELEKAK---------SFFDGA----------------- 177
Query: 203 SLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHE 262
++ R + +++ L+ GF E A +V +++E V PS ++YN L+ C
Sbjct: 178 ---KDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRN 234
Query: 263 GYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETY 322
+ KA E M ++ ++P+ VTF L+ C GE ++A++ + M +G P L Y
Sbjct: 235 DDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNY 294
Query: 323 NSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMAS 382
L++ G+ + +L E++K+ +KP+V+ Y L+N LC + ++ +A VL +M
Sbjct: 295 GILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQM 354
Query: 383 RG 384
+G
Sbjct: 355 KG 356
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 95/194 (48%), Gaps = 2/194 (1%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K + P+ + L + L ++ + + DM G +P +V+YG +
Sbjct: 247 MIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGR 306
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D+ L+G M+K R+ P V +YN+++ LC RV +A ++ EM + PN TY
Sbjct: 307 IDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRM 366
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEM--EG 178
+IDG+C++ + + ++ M A P+ T+ C++ GL G ++ A VL M +
Sbjct: 367 MIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKN 426
Query: 179 NGFLPGGFSRIVFD 192
F G + ++ D
Sbjct: 427 LSFGSGAWQNLLSD 440
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%)
Query: 6 VLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGF 65
V PSV + N L L + K ++ DM++ IRP+ V++G ++ + ++
Sbjct: 217 VQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAK 276
Query: 66 ELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGY 125
+LM ME P + Y +++ L K R+ +A+ L EM R + P+ V YN L++
Sbjct: 277 KLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHL 336
Query: 126 CKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP 183
C + +A+ + M+ +P+ TY ++ G C + VL M + P
Sbjct: 337 CTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCP 394
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 85/173 (49%)
Query: 211 RIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQ 270
R D +YS+L+ + + ++L + V + + L+ Y G V+KAI
Sbjct: 78 RHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAID 137
Query: 271 TAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYG 330
++ + + NTLIN + GE+++A+ + + + P ++N LI G+
Sbjct: 138 VFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFL 197
Query: 331 RISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
++ ++ +E+ + ++P+V++Y SLI LC++ + A+ +L DM +
Sbjct: 198 DKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKK 250
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 158/346 (45%), Gaps = 45/346 (13%)
Query: 20 LVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPS 79
L+ S+ E + FT ++ +R + S +AV ++D GC+ P
Sbjct: 176 LMKSRNVEISIETFTILIRRYVRAGLAS--EAVHCFNRMEDY-------GCV------PD 220
Query: 80 VFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKA 139
+++V+ L + RR +A+ FD + R P+ + Y L+ G+C+ GE+ +A +
Sbjct: 221 KIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFK 279
Query: 140 RMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSN 199
MK EP+V TY+ ++ LC G+++ A +V +M +G P
Sbjct: 280 EMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAI------------- 326
Query: 200 GNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAY 259
T++ L+ + GR EK +V ++ + G P I+YN L+ A+
Sbjct: 327 ----------------TFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAH 370
Query: 260 CHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTL 319
C + +E A++ M ++ + + TFNT+ + +V+ A R KM+E P
Sbjct: 371 CRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNT 430
Query: 320 ETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLC 365
TYN L+ + + ++ +E++ K ++PNV +Y L+ C
Sbjct: 431 VTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFC 476
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 144/319 (45%), Gaps = 30/319 (9%)
Query: 33 FTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCK 92
F D ++ PDV+ Y V ++ + ++ M+ + P+V+ Y++V+ LC+
Sbjct: 243 FFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCR 302
Query: 93 VRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVIT 152
++ A +F +ML PN +T+N L+ + K G EK + +MK EP IT
Sbjct: 303 CGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTIT 362
Query: 153 YNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARI 212
YN L+ C + +A +VL M +
Sbjct: 363 YNFLIEAHCRDENLENAVKVLNTM-----------------------------IKKKCEV 393
Query: 213 DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTA 272
+ T++ + + + A + +K++E P+ ++YNIL+ + + ++
Sbjct: 394 NASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMK 453
Query: 273 EQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLE-KGIAPTLETYNSLINGYGR 331
++M+++ ++P+ T+ L+ FC G + A + K+M+E K + P+L Y ++ R
Sbjct: 454 KEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRR 513
Query: 332 ISNFVKCFEILEEIEKKGM 350
K E++E++ +KG+
Sbjct: 514 AGQLKKHEELVEKMIQKGL 532
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 133/289 (46%), Gaps = 23/289 (7%)
Query: 104 DEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSS 163
D+ H++ P YN +ID KV + + A+ L MK+ N E S+ T+ L+ +
Sbjct: 144 DDYDHKSPHP----YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRA 199
Query: 164 GRVNDAREVLVEMEGNGFLPG--GFSRIVFDDDSACSNGNGSLRANVAARI--------- 212
G ++A ME G +P FS ++ SN + RA+ A
Sbjct: 200 GLASEAVHCFNRMEDYGCVPDKIAFSIVI-------SNLSRKRRASEAQSFFDSLKDRFE 252
Query: 213 -DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQT 271
D Y+ L+ G+CR G I +A++V ++ G+ P+ +Y+I+++A C G + +A
Sbjct: 253 PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDV 312
Query: 272 AEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGR 331
M + G P+ +TFN L+ + G ++ + +M + G P TYN LI + R
Sbjct: 313 FADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCR 372
Query: 332 ISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDM 380
N ++L + KK + N ++ ++ + K R + A + M
Sbjct: 373 DENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKM 421
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 28/246 (11%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G P+ + N L V + + EKVL V+ M + G PD ++Y +EA ++
Sbjct: 316 MLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDEN 375
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L+ +++ M K++ + +N + + K R V A +++ +M+ PNTVTYN
Sbjct: 376 LENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNI 435
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L+ + + +K M EP+V TY L+ C G N+A ++ EM
Sbjct: 436 LMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMV--- 492
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
+ C + SL Y +L R G+++K +E++ K+
Sbjct: 493 -------------EEKCLTPSLSL------------YEMVLAQLRRAGQLKKHEELVEKM 527
Query: 241 VENGVV 246
++ G+V
Sbjct: 528 IQKGLV 533
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 120/281 (42%), Gaps = 30/281 (10%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+ G+ P+V + + + + L Q + VF DM++SG P+ +++ + V
Sbjct: 281 MKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGR 340
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+K ++ M+K P YN ++ C+ +++A K+ + M+ + N T+NT
Sbjct: 341 TEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNT 400
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+ K ++ A + ++M EP+ +TYN L+ S + ++ EM
Sbjct: 401 IFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEM---- 456
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
DD N N TY L+ FC +G A ++ ++
Sbjct: 457 -----------DDKEVEPNVN--------------TYRLLVTMFCGMGHWNNAYKLFKEM 491
Query: 241 VENG-VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGL 280
VE + PS Y +++ G ++K + E+M ++GL
Sbjct: 492 VEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 156/313 (49%), Gaps = 16/313 (5%)
Query: 33 FTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCK 92
F MVE GI+P V + + + K ++ E G + + PS Y++++ G +
Sbjct: 161 FNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWAR 220
Query: 93 VRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVIT 152
+R ARK+FDEML RN V + + YN L+D CK G+++ + + M +P +
Sbjct: 221 IRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYS 280
Query: 153 YNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG--GFSRIVFDDDSACSN---GNGSLRAN 207
+ + C +G V+ A +VL M+ +P F+ I+ + C N + L +
Sbjct: 281 FAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHII---KTLCKNEKVDDAYLLLD 337
Query: 208 ----VAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEG 263
A D TY++++ C + +A ++L+++ +P + +YN+++ G
Sbjct: 338 EMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIG 397
Query: 264 YVEKAIQTAEQMEERGLKPSYVTFNTLINKFC-ETGEVDQAERWVKKMLEKGIAP---TL 319
++A + E M ER P+ T+ +I+ + G++++A R+ + M+++GI P T+
Sbjct: 398 RFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTV 457
Query: 320 ETYNSLINGYGRI 332
E + + G+G++
Sbjct: 458 EMLRNRLVGWGQM 470
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 130/293 (44%), Gaps = 29/293 (9%)
Query: 76 VGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAF 135
+ P V + +L LC + V A++ F + +VP+ TY+ L+ G+ ++ + A
Sbjct: 169 IKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGAR 228
Query: 136 SLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDS 195
+ M N ++ YN LL LC SG V+ ++ EM G P +S +F
Sbjct: 229 KVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIF---- 284
Query: 196 ACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNIL 255
++ +C G + A +VL ++ +VP+ ++N +
Sbjct: 285 -------------------------IHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHI 319
Query: 256 VNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGI 315
+ C V+ A ++M ++G P T+N+++ C+ EV++A + + +M
Sbjct: 320 IKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKC 379
Query: 316 APTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDR 368
P TYN ++ RI F + EI E + ++ P V +Y +I+ L + +
Sbjct: 380 LPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKK 432
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 119/266 (44%), Gaps = 30/266 (11%)
Query: 12 SVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCM 71
+ N L + L S + +F +M G++PD S+ + A D+ ++++ M
Sbjct: 245 AYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRM 304
Query: 72 EKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEM 131
++ + P+V+ +N ++ LCK +V DA L DEM+ + P+T TYN+++ +C E+
Sbjct: 305 KRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEV 364
Query: 132 EKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVF 191
+A L +RM P TYN +L L GR + A E+ M F P
Sbjct: 365 NRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYP-------- 416
Query: 192 DDDSACSNGNGSLRANVAARIDERTYSALLNGFCR-VGRIEKAKEVLAKLVENGVVPSQI 250
VA TY+ +++G R G++E+A +++ G+ P
Sbjct: 417 ---------------TVA------TYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYST 455
Query: 251 SYNILVNAYCHEGYVEKAIQTAEQME 276
+ +L N G ++ A +ME
Sbjct: 456 TVEMLRNRLVGWGQMDVVDVLAGKME 481
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 140/304 (46%), Gaps = 16/304 (5%)
Query: 94 RRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK----VGEMEKAFSLKARMKAPNAEPS 149
R + D R D++ H + + + L++ K +G F L AR + P+ S
Sbjct: 43 RVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWAR-RIPDFAHS 101
Query: 150 VITYNCLLGGLCSSGRVNDAREVLVEM-EGNGF-LPGGFSRIVFDDDS-------ACSNG 200
+ +Y+ L+ L SS + + L+E E N F + IVF S AC
Sbjct: 102 LESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAF 161
Query: 201 NGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYC 260
N + + +D+ LL+ C + A+E K G+VPS +Y+ILV +
Sbjct: 162 NRMVEFGIKPCVDD--LDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWA 219
Query: 261 HEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLE 320
A + ++M ER + +N L++ C++G+VD + ++M G+ P
Sbjct: 220 RIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAY 279
Query: 321 TYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDM 380
++ I+ Y + +++L+ +++ + PNV ++ +I LCK+ K+ DA ++L +M
Sbjct: 280 SFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEM 339
Query: 381 ASRG 384
+G
Sbjct: 340 IQKG 343
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 79/168 (47%), Gaps = 1/168 (0%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M++ ++P+V + N + +TL +++ + + +M++ G PD +Y + +
Sbjct: 304 MKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCE 363
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+++ +L+ M++ + P YN+VL L ++ R A ++++ M R P TY
Sbjct: 364 VNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTV 423
Query: 121 LIDGYC-KVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVN 167
+I G K G++E+A M P T L L G+++
Sbjct: 424 MIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMD 471
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 178/421 (42%), Gaps = 66/421 (15%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + + PS + N L S + + L V M ++G+ PD+V++ + A +
Sbjct: 204 MLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ 263
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNL--VPNTVTY 118
K M+ +V P +N+++ L K+ + A LF+ M + P+ VT+
Sbjct: 264 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 323
Query: 119 NTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEG 178
+++ Y GE+E ++ M A +P++++YN L+G G A VL +++
Sbjct: 324 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 383
Query: 179 NGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLA 238
NG +P D +Y+ LLN + R + KAKEV
Sbjct: 384 NGIIP-----------------------------DVVSYTCLLNSYGRSRQPGKAKEVFL 414
Query: 239 KLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVT------------ 286
+ + P+ ++YN L++AY G++ +A++ QME+ G+KP+ V+
Sbjct: 415 MMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSK 474
Query: 287 -----------------------FNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYN 323
+N+ I + E+++A + M +K + T+
Sbjct: 475 KKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFT 534
Query: 324 SLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
LI+G R+S + + L+E+E + Y S++ K ++ +AE + M
Sbjct: 535 ILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMA 594
Query: 384 G 384
G
Sbjct: 595 G 595
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 152/332 (45%), Gaps = 8/332 (2%)
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D+ L M+K P Y+ ++ + + + A L D+ML + P+ TYN
Sbjct: 159 VDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNN 218
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI+ G +A + +M P ++T+N +L S + + A M+G
Sbjct: 219 LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK 278
Query: 181 FLPGG--FSRIVF------DDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEK 232
P F+ I++ A N R D T++++++ + G IE
Sbjct: 279 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIEN 338
Query: 233 AKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLIN 292
+ V +V G+ P+ +SYN L+ AY G A+ +++ G+ P V++ L+N
Sbjct: 339 CRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLN 398
Query: 293 KFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKP 352
+ + + +A+ M ++ P + TYN+LI+ YG + EI ++E+ G+KP
Sbjct: 399 SYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKP 458
Query: 353 NVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
NV+S +L+ + +K ++ + VL SRG
Sbjct: 459 NVVSVCTLLAACSRSKKKVNVDTVLSAAQSRG 490
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 148/363 (40%), Gaps = 31/363 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+K P + + L + Q+ + + DM+ + I P +Y + A +
Sbjct: 169 MQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGN 228
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ E+ M VGP + +N+VL R+ A F+ M + P+T T+N
Sbjct: 229 WREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNI 288
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAE--PSVITYNCLLGGLCSSGRVNDAREVLVEMEG 178
+I K+G+ +A L M+ AE P V+T+ ++ G + + R V M
Sbjct: 289 IIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVA 348
Query: 179 NGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLA 238
G P S Y+AL+ + G A VL
Sbjct: 349 EGLKPNIVS-----------------------------YNALMGAYAVHGMSGTALSVLG 379
Query: 239 KLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETG 298
+ +NG++P +SY L+N+Y KA + M + KP+ VT+N LI+ + G
Sbjct: 380 DIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNG 439
Query: 299 EVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYG 358
+ +A ++M + GI P + + +L+ R V +L + +G+ N +Y
Sbjct: 440 FLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYN 499
Query: 359 SLI 361
S I
Sbjct: 500 SAI 502
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/411 (21%), Positives = 176/411 (42%), Gaps = 47/411 (11%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M +GV P + + N + +Q+ K L+ F M + +RPD ++ + L
Sbjct: 239 MTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQ 298
Query: 61 LDKGFELMGCMEKERVG--PSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTY 118
+ +L M ++R P V + ++ +++ R +F+ M+ L PN V+Y
Sbjct: 299 SSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY 358
Query: 119 NTLIDGYCKVGEMEKAFSL------------------------------KAR-----MKA 143
N L+ Y G A S+ KA+ M+
Sbjct: 359 NALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRK 418
Query: 144 PNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGS 203
+P+V+TYN L+ S+G + +A E+ +ME +G P S V +ACS
Sbjct: 419 ERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVS--VCTLLAACSRSKKK 476
Query: 204 LRANV---AAR-----IDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNIL 255
+ + AA+ ++ Y++ + + +EKA + + + V +++ IL
Sbjct: 477 VNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTIL 536
Query: 256 VNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGI 315
++ C +AI ++ME+ + + +++++ + + G+V +AE +M G
Sbjct: 537 ISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGC 596
Query: 316 APTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCK 366
P + Y S+++ Y + K E+ E+E G++P+ I+ +L+ K
Sbjct: 597 EPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNK 647
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 160/365 (43%), Gaps = 37/365 (10%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M +DG+ P+V SV L SK+ V V + GI + +Y A+ + + +
Sbjct: 451 MEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAE 510
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L+K L M K++V + +++ G C++ + +A EM ++ Y++
Sbjct: 511 LEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSS 570
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
++ Y K G++ +A S+ +MK EP VI Y +L +S + A E+ +EME NG
Sbjct: 571 VLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANG 630
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P D AC SAL+ F + G+ VL L
Sbjct: 631 IEP---------DSIAC--------------------SALMRAFNKGGQPSNVF-VLMDL 660
Query: 241 VENGVVPSQISYNILVNAYCHE-GYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGE 299
+ +P + + + C+ ++AI + M+ S N +++ F ++G+
Sbjct: 661 MREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGK 720
Query: 300 VDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKP------N 353
V+ + K++ G+ L+TY L+ + N+ K E+LE + G++P +
Sbjct: 721 VEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRD 780
Query: 354 VISYG 358
+IS+G
Sbjct: 781 IISFG 785
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 31/280 (11%)
Query: 107 LHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRV 166
+ +N YN +I + + +++A L M+ + +P TY+ L+ +G+
Sbjct: 135 IQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQW 194
Query: 167 NDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCR 226
A ++ +M LRA +A TY+ L+N
Sbjct: 195 RWAMNLMDDM---------------------------LRAAIAP--SRSTYNNLINACGS 225
Query: 227 VGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVT 286
G +A EV K+ +NGV P +++NI+++AY KA+ E M+ ++P T
Sbjct: 226 SGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTT 285
Query: 287 FNTLINKFCETGEVDQAERWVKKMLEKGIA--PTLETYNSLINGYGRISNFVKCFEILEE 344
FN +I + G+ QA M EK P + T+ S+++ Y C + E
Sbjct: 286 FNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEA 345
Query: 345 IEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ +G+KPN++SY +L+ A VLGD+ G
Sbjct: 346 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 385
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 3/165 (1%)
Query: 211 RIDERTYSALLNGFCRVGRIEKAKEVLA--KLVENGVVPSQISYNILVNAYCHEGYVEKA 268
R + + L+ R G IE V K+ +N + I YN+++ + +V++A
Sbjct: 104 RFARKNFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDI-YNMMIRLHARHNWVDQA 162
Query: 269 IQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLING 328
+M++ KP T++ LIN G+ A + ML IAP+ TYN+LIN
Sbjct: 163 RGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINA 222
Query: 329 YGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDA 373
G N+ + E+ +++ G+ P+++++ +++ R+ A
Sbjct: 223 CGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKA 267
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 178/421 (42%), Gaps = 66/421 (15%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + + PS + N L S + + L V M ++G+ PD+V++ + A +
Sbjct: 72 MLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ 131
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNL--VPNTVTY 118
K M+ +V P +N+++ L K+ + A LF+ M + P+ VT+
Sbjct: 132 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 191
Query: 119 NTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEG 178
+++ Y GE+E ++ M A +P++++YN L+G G A VL +++
Sbjct: 192 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 251
Query: 179 NGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLA 238
NG +P D +Y+ LLN + R + KAKEV
Sbjct: 252 NGIIP-----------------------------DVVSYTCLLNSYGRSRQPGKAKEVFL 282
Query: 239 KLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVT------------ 286
+ + P+ ++YN L++AY G++ +A++ QME+ G+KP+ V+
Sbjct: 283 MMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSK 342
Query: 287 -----------------------FNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYN 323
+N+ I + E+++A + M +K + T+
Sbjct: 343 KKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFT 402
Query: 324 SLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
LI+G R+S + + L+E+E + Y S++ K ++ +AE + M
Sbjct: 403 ILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMA 462
Query: 384 G 384
G
Sbjct: 463 G 463
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 152/332 (45%), Gaps = 8/332 (2%)
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D+ L M+K P Y+ ++ + + + A L D+ML + P+ TYN
Sbjct: 27 VDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNN 86
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI+ G +A + +M P ++T+N +L S + + A M+G
Sbjct: 87 LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK 146
Query: 181 FLPGG--FSRIVF------DDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEK 232
P F+ I++ A N R D T++++++ + G IE
Sbjct: 147 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIEN 206
Query: 233 AKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLIN 292
+ V +V G+ P+ +SYN L+ AY G A+ +++ G+ P V++ L+N
Sbjct: 207 CRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLN 266
Query: 293 KFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKP 352
+ + + +A+ M ++ P + TYN+LI+ YG + EI ++E+ G+KP
Sbjct: 267 SYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKP 326
Query: 353 NVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
NV+S +L+ + +K ++ + VL SRG
Sbjct: 327 NVVSVCTLLAACSRSKKKVNVDTVLSAAQSRG 358
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 148/363 (40%), Gaps = 31/363 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+K P + + L + Q+ + + DM+ + I P +Y + A +
Sbjct: 37 MQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGN 96
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ E+ M VGP + +N+VL R+ A F+ M + P+T T+N
Sbjct: 97 WREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNI 156
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAE--PSVITYNCLLGGLCSSGRVNDAREVLVEMEG 178
+I K+G+ +A L M+ AE P V+T+ ++ G + + R V M
Sbjct: 157 IIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVA 216
Query: 179 NGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLA 238
G P S Y+AL+ + G A VL
Sbjct: 217 EGLKPNIVS-----------------------------YNALMGAYAVHGMSGTALSVLG 247
Query: 239 KLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETG 298
+ +NG++P +SY L+N+Y KA + M + KP+ VT+N LI+ + G
Sbjct: 248 DIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNG 307
Query: 299 EVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYG 358
+ +A ++M + GI P + + +L+ R V +L + +G+ N +Y
Sbjct: 308 FLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYN 367
Query: 359 SLI 361
S I
Sbjct: 368 SAI 370
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/411 (21%), Positives = 176/411 (42%), Gaps = 47/411 (11%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M +GV P + + N + +Q+ K L+ F M + +RPD ++ + L
Sbjct: 107 MTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQ 166
Query: 61 LDKGFELMGCMEKERVG--PSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTY 118
+ +L M ++R P V + ++ +++ R +F+ M+ L PN V+Y
Sbjct: 167 SSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY 226
Query: 119 NTLIDGYCKVGEMEKAFSL------------------------------KAR-----MKA 143
N L+ Y G A S+ KA+ M+
Sbjct: 227 NALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRK 286
Query: 144 PNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGS 203
+P+V+TYN L+ S+G + +A E+ +ME +G P S V +ACS
Sbjct: 287 ERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVS--VCTLLAACSRSKKK 344
Query: 204 LRANV---AAR-----IDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNIL 255
+ + AA+ ++ Y++ + + +EKA + + + V +++ IL
Sbjct: 345 VNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTIL 404
Query: 256 VNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGI 315
++ C +AI ++ME+ + + +++++ + + G+V +AE +M G
Sbjct: 405 ISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGC 464
Query: 316 APTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCK 366
P + Y S+++ Y + K E+ E+E G++P+ I+ +L+ K
Sbjct: 465 EPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNK 515
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 160/365 (43%), Gaps = 37/365 (10%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M +DG+ P+V SV L SK+ V V + GI + +Y A+ + + +
Sbjct: 319 MEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAE 378
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L+K L M K++V + +++ G C++ + +A EM ++ Y++
Sbjct: 379 LEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSS 438
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
++ Y K G++ +A S+ +MK EP VI Y +L +S + A E+ +EME NG
Sbjct: 439 VLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANG 498
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P D AC SAL+ F + G+ VL L
Sbjct: 499 IEP---------DSIAC--------------------SALMRAFNKGGQPSNVF-VLMDL 528
Query: 241 VENGVVPSQISYNILVNAYCHE-GYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGE 299
+ +P + + + C+ ++AI + M+ S N +++ F ++G+
Sbjct: 529 MREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGK 588
Query: 300 VDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKP------N 353
V+ + K++ G+ L+TY L+ + N+ K E+LE + G++P +
Sbjct: 589 VEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRD 648
Query: 354 VISYG 358
+IS+G
Sbjct: 649 IISFG 653
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 31/280 (11%)
Query: 107 LHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRV 166
+ +N YN +I + + +++A L M+ + +P TY+ L+ +G+
Sbjct: 3 IQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQW 62
Query: 167 NDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCR 226
A ++ +M LRA +A TY+ L+N
Sbjct: 63 RWAMNLMDDM---------------------------LRAAIAP--SRSTYNNLINACGS 93
Query: 227 VGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVT 286
G +A EV K+ +NGV P +++NI+++AY KA+ E M+ ++P T
Sbjct: 94 SGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTT 153
Query: 287 FNTLINKFCETGEVDQAERWVKKMLEKGIA--PTLETYNSLINGYGRISNFVKCFEILEE 344
FN +I + G+ QA M EK P + T+ S+++ Y C + E
Sbjct: 154 FNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEA 213
Query: 345 IEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ +G+KPN++SY +L+ A VLGD+ G
Sbjct: 214 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 253
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 167/394 (42%), Gaps = 41/394 (10%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+ GV +++S N LF+ ++ ++ F MV G+ P +Y + +
Sbjct: 211 MKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLR 270
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L+ M+ + P +N ++ G C+ +++ +A KLF EM + P+ V+Y T
Sbjct: 271 LETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTT 330
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+I GY V ++ + M++ EP+ TY+ LL GLC +G++ +A+ +L M
Sbjct: 331 MIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKH 390
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P D + LL + G + A EVL +
Sbjct: 391 IAPK----------------------------DNSIFLKLLVSQSKAGDMAAATEVLKAM 422
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEER----------GLKPSYVTFNTL 290
V Y +L+ C +AI+ + + E+ ++PS +N +
Sbjct: 423 ATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPS--AYNPI 480
Query: 291 INKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGM 350
I C G+ +AE ++++++G+ + N+LI G+ + N +EIL+ + ++G+
Sbjct: 481 IEYLCNNGQTAKAEVLFRQLMKRGVQDQ-DALNNLIRGHAKEGNPDSSYEILKIMSRRGV 539
Query: 351 KPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+Y LI + DA+ L M G
Sbjct: 540 PRESNAYELLIKSYMSKGEPGDAKTALDSMVEDG 573
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 145/310 (46%), Gaps = 27/310 (8%)
Query: 90 LCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPS 149
L +V ++ AR + +M + + + + LI+ Y K G ++++ + +MK E +
Sbjct: 160 LGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERT 219
Query: 150 VITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVA 209
+ +YN L + GR A+ +M G P +R + + SLR A
Sbjct: 220 IKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEP---TRHTY--NLMLWGFFLSLRLETA 274
Query: 210 ARI-----------DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNA 258
R D+ T++ ++NGFCR ++++A+++ ++ N + PS +SY ++
Sbjct: 275 LRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKG 334
Query: 259 YCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPT 318
Y V+ ++ E+M G++P+ T++TL+ C+ G++ +A+ +K M+ K IAP
Sbjct: 335 YLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPK 394
Query: 319 LET-YNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDR------KLL 371
+ + L+ + + E+L+ + + YG LI CK KLL
Sbjct: 395 DNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLL 454
Query: 372 DA----EIVL 377
D EI+L
Sbjct: 455 DTLIEKEIIL 464
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 91/170 (53%)
Query: 211 RIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQ 270
R D T+ ++ V ++ A+ +L + E GV + + +L+ +Y G V+++++
Sbjct: 147 RHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVK 206
Query: 271 TAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYG 330
++M++ G++ + ++N+L G A+R+ KM+ +G+ PT TYN ++ G+
Sbjct: 207 IFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFF 266
Query: 331 RISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDM 380
E+++ +G+ P+ ++ ++IN C+ +K+ +AE + +M
Sbjct: 267 LSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEM 316
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 94/206 (45%), Gaps = 35/206 (16%)
Query: 213 DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTA 272
DE + L+ + + G ++++ ++ K+ + GV + SYN L G A +
Sbjct: 184 DEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYF 243
Query: 273 EQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRI 332
+M G++P+ T+N ++ F + ++ A R+ + M +GI+P T+N++ING+ R
Sbjct: 244 NKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRF 303
Query: 333 SN-------FVKC----------------------------FEILEEIEKKGMKPNVISY 357
FV+ I EE+ G++PN +Y
Sbjct: 304 KKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTY 363
Query: 358 GSLINCLCKDRKLLDAEIVLGDMASR 383
+L+ LC K+++A+ +L +M ++
Sbjct: 364 STLLPGLCDAGKMVEAKNILKNMMAK 389
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/470 (18%), Positives = 173/470 (36%), Gaps = 90/470 (19%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+ G+ P + N + K+ ++ +F +M + I P VVSY ++ + +
Sbjct: 281 MKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDR 340
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVP-NTVTYN 119
+D G + M + P+ Y+ +L GLC ++ +A+ + M+ +++ P + +
Sbjct: 341 VDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFL 400
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVL------ 173
L+ K G+M A + M N Y L+ C + N A ++L
Sbjct: 401 KLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEK 460
Query: 174 ---------VEMEGNGFLP----------GGFSRIVF--------DDDSACSN------- 199
+EME + + P + ++F D A +N
Sbjct: 461 EIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAK 520
Query: 200 -GNGSLRANVAARIDER-------TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQ-- 249
GN + + R Y L+ + G AK L +VE+G VP
Sbjct: 521 EGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSL 580
Query: 250 ------------------------ISYNI-----------LVNAYCHEGYVEKAIQTAEQ 274
I N+ ++ A G+VE+A+ +
Sbjct: 581 FRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDL 640
Query: 275 MEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISN 334
+ + G ++L++ E G+ A + + LE+ ++ +Y+ +++
Sbjct: 641 LNQNG---HTADLDSLLSVLSEKGKTIAALKLLDFGLERDLSLEFSSYDKVLDALLGAGK 697
Query: 335 FVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ + +L +I +KG + S LI L ++ A+ VL M +G
Sbjct: 698 TLNAYSVLCKIMEKGSSTDWKSSDELIKSLNQEGNTKQAD-VLSRMIKKG 746
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 171/376 (45%), Gaps = 46/376 (12%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFE- 66
P++ LF ++ + + L +++S YG + ++ D K F+
Sbjct: 63 PNLSDAKSLFNSIAATSRIPLDLKFHNSVLQS--------YG----SIAVVNDTVKLFQH 110
Query: 67 LMGCMEKERVGPSVFVYNLVLGGLCKV--RRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
++ R G S F+ ++L C+ + + ++ + M++ L P+ VT + +
Sbjct: 111 ILKSQPNFRPGRSTFL--ILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRS 168
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
C+ G +++A L + ++ P TYN LL LC ++ E + EM
Sbjct: 169 LCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEM-------- 220
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
R + + D +++ L++ C + +A +++KL G
Sbjct: 221 --------------------RDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAG 260
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
P YN ++ +C +A+ ++M+E G++P +T+NTLI + G V++A
Sbjct: 261 FKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEAR 320
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
++K M++ G P TY SL+NG R + +LEE+E +G PN +Y +L++ L
Sbjct: 321 MYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGL 380
Query: 365 CKDRKLLDAEIVLGDM 380
CK R L+D + L +M
Sbjct: 381 CKAR-LMDKGMELYEM 395
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 138/297 (46%), Gaps = 30/297 (10%)
Query: 78 PSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSL 137
P ++ + LC+ RV +A+ L E+ ++ P+T TYN L+ CK ++ +
Sbjct: 157 PDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEF 216
Query: 138 KARMKAP-NAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSA 196
M+ + +P ++++ L+ +C+S + +A ++ ++ GF P F
Sbjct: 217 VDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCF---------- 266
Query: 197 CSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILV 256
Y+ ++ GFC + + +A V K+ E GV P QI+YN L+
Sbjct: 267 -------------------LYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLI 307
Query: 257 NAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIA 316
G VE+A + M + G +P T+ +L+N C GE A +++M +G A
Sbjct: 308 FGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCA 367
Query: 317 PTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDA 373
P TYN+L++G + K E+ E ++ G+K Y +L+ L K K+ +A
Sbjct: 368 PNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEA 424
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 141/316 (44%), Gaps = 30/316 (9%)
Query: 29 VLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLG 88
V V MV +G+ PD V+ AV + +D+ +LM + ++ P + YN +L
Sbjct: 143 VHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLK 202
Query: 89 GLCKVRRVKDARKLFDEMLHR-NLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAE 147
LCK + + + DEM ++ P+ V++ LID C + +A L +++ +
Sbjct: 203 HLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFK 262
Query: 148 PSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRAN 207
P YN ++ G C+ + ++A V +M+ G P
Sbjct: 263 PDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEP------------------------ 298
Query: 208 VAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEK 267
D+ TY+ L+ G + GR+E+A+ L +V+ G P +Y L+N C +G
Sbjct: 299 -----DQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLG 353
Query: 268 AIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLIN 327
A+ E+ME RG P+ T+NTL++ C+ +D+ + M G+ Y +L+
Sbjct: 354 ALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVR 413
Query: 328 GYGRISNFVKCFEILE 343
+ + +E+ +
Sbjct: 414 SLVKSGKVAEAYEVFD 429
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 148/343 (43%), Gaps = 55/343 (16%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M +G+ P + + +L + + ++ + ++ E PD +Y ++ KD
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 61 LDKGFELMGCMEKE-RVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYN 119
L +E + M + V P + + +++ +C + +++A L ++ + P+ YN
Sbjct: 210 LHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYN 269
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN 179
T++ G+C + + +A + +MK EP ITYN L+ GL +GRV +AR L M
Sbjct: 270 TIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDA 329
Query: 180 GFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAK 239
G+ P D TY++L+NG CR G A +L +
Sbjct: 330 GYEP-----------------------------DTATYTSLMNGMCRKGESLGALSLLEE 360
Query: 240 LVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGE 299
+ G P+ +YN L++ C ++K ++ E M+ G+K + TL+ ++G+
Sbjct: 361 MEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGK 420
Query: 300 VDQAE-------------------------RWVKKMLEKGIAP 317
V +A +W+KK E+G+ P
Sbjct: 421 VAEAYEVFDYAVDSKSLSDASAYSTLETTLKWLKKAKEQGLVP 463
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 139/318 (43%), Gaps = 40/318 (12%)
Query: 75 RVGPSVFVYNLVLGGLCKVRRVKDARKLFDEML--HRNLVPNTVTYNTLIDGYCK----- 127
R+ + +N VL + V D KLF +L N P T+ L+ C+
Sbjct: 80 RIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSS 139
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
+ + + +L M EP +T + + LC +GRV++A++++ E+ P
Sbjct: 140 ISNVHRVLNL---MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPP---- 192
Query: 188 RIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVEN-GVV 246
D TY+ LL C+ + E + ++ ++ V
Sbjct: 193 -------------------------DTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVK 227
Query: 247 PSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERW 306
P +S+ IL++ C+ + +A+ ++ G KP +NT++ FC + +A
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 307 VKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCK 366
KKM E+G+ P TYN+LI G + + L+ + G +P+ +Y SL+N +C+
Sbjct: 288 YKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Query: 367 DRKLLDAEIVLGDMASRG 384
+ L A +L +M +RG
Sbjct: 348 KGESLGALSLLEEMEARG 365
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 159/337 (47%), Gaps = 20/337 (5%)
Query: 51 AVEAAVMLKDLDKGFELMGCMEKERVGPSV----FVYNLVLGGLCKVRRVKDARKLFDEM 106
A +A +LK +D +G + P Y ++G L + ++ + KL DEM
Sbjct: 326 AYQANQVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEM 385
Query: 107 LHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRV 166
+ PNTVTYN LI Y + +++A ++ +M+ EP +TY L+ +G +
Sbjct: 386 VRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFL 445
Query: 167 NDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARI-----------DER 215
+ A ++ M+ G P F+ V + C G L A A R+ +
Sbjct: 446 DIAMDMYQRMQEAGLSPDTFTYSVIIN---CLGKAGHLPA--AHRLFCEMVGQGCTPNLV 500
Query: 216 TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQM 275
T++ ++ + E A ++ + G P +++Y+I++ H G++E+A +M
Sbjct: 501 TFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEM 560
Query: 276 EERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNF 335
+ + P + L++ + + G VD+A +W + ML+ G+ P + T NSL++ + R+
Sbjct: 561 QRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRM 620
Query: 336 VKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLD 372
+ + +L+ + G+ P++ +Y L++C R D
Sbjct: 621 SEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFD 657
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 142/296 (47%), Gaps = 6/296 (2%)
Query: 38 ESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVK 97
+ G + D +Y V K + +L+ M ++ P+ YN ++ + +K
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLK 411
Query: 98 DARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLL 157
+A +F++M P+ VTY TLID + K G ++ A + RM+ P TY+ ++
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 158 GGLCSSGRVNDAREVLVEMEGNGFLPGGFS-RIVFDDDSACSNGNGSLR-----ANVAAR 211
L +G + A + EM G G P + I+ + N +L+ N +
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQ 531
Query: 212 IDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQT 271
D+ TYS ++ G +E+A+ V A++ VP + Y +LV+ + G V+KA Q
Sbjct: 532 PDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQW 591
Query: 272 AEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLIN 327
+ M + GL+P+ T N+L++ F + +A ++ ML G+ P+L+TY L++
Sbjct: 592 YQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 130/292 (44%), Gaps = 29/292 (9%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M +DG P+ + NRL + + ++ + VF M E+G PD V+Y ++
Sbjct: 385 MVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGF 444
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
LD ++ M++ + P F Y++++ L K + A +LF EM+ + PN VT+N
Sbjct: 445 LDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNI 504
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+I + K E A L M+ +P +TY+ ++ L G + +A V EM+
Sbjct: 505 MIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKN 564
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
++P DE Y L++ + + G ++KA + +
Sbjct: 565 WVP-----------------------------DEPVYGLLVDLWGKAGNVDKAWQWYQAM 595
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLIN 292
++ G+ P+ + N L++ + + +A + M GL PS T+ L++
Sbjct: 596 LQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 94/181 (51%)
Query: 204 LRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEG 263
L+ + D TY+ ++ R + + ++L ++V +G P+ ++YN L+++Y
Sbjct: 349 LKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRAN 408
Query: 264 YVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYN 323
Y+++A+ QM+E G +P VT+ TLI+ + G +D A ++M E G++P TY+
Sbjct: 409 YLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYS 468
Query: 324 SLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
+IN G+ + + E+ +G PN++++ +I K R A + DM +
Sbjct: 469 VIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNA 528
Query: 384 G 384
G
Sbjct: 529 G 529
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 89/165 (53%)
Query: 216 TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQM 275
TY+ L++ + R +++A V ++ E G P +++Y L++ + G+++ A+ ++M
Sbjct: 396 TYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRM 455
Query: 276 EERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNF 335
+E GL P T++ +IN + G + A R +M+ +G P L T+N +I + + N+
Sbjct: 456 QEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNY 515
Query: 336 VKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDM 380
++ +++ G +P+ ++Y ++ L L +AE V +M
Sbjct: 516 ETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEM 560
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 135/295 (45%), Gaps = 32/295 (10%)
Query: 78 PSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSL 137
P YN+++ G + DA KLFDEM+ + + P VT+ TLI G CK +++A +
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 138 KARM-KAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVE-MEGNGFLPGGFSRIVFDDDS 195
K M K P+V Y L+ LC G ++ A ++ E EG
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGK---------------- 253
Query: 196 ACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNIL 255
++D YS L++ + GR + +L ++ E G P ++YN+L
Sbjct: 254 --------------IKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVL 299
Query: 256 VNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGI 315
+N +C E E A + ++M E+GLKP +++N ++ F + ++A + M +G
Sbjct: 300 INGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGC 359
Query: 316 APTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKL 370
+P +Y + +G F + IL+E+ KG KP + LC+ KL
Sbjct: 360 SPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKL 414
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 128/272 (47%), Gaps = 28/272 (10%)
Query: 113 PNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREV 172
P+ TYN LI G + G + A L M +P+ +T+ L+ GLC RV +A ++
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 173 LVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEK 232
+M L+ R Y++L+ C++G +
Sbjct: 210 KHDM---------------------------LKV-YGVRPTVHIYASLIKALCQIGELSF 241
Query: 233 AKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLIN 292
A ++ + E + Y+ L+++ G + E+M E+G KP VT+N LIN
Sbjct: 242 AFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLIN 301
Query: 293 KFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKP 352
FC + + A R + +M+EKG+ P + +YN ++ + RI + + + E++ ++G P
Sbjct: 302 GFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSP 361
Query: 353 NVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ +SY + + LC+ + +A ++L +M +G
Sbjct: 362 DTLSYRIVFDGLCEGLQFEEAAVILDEMLFKG 393
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 138/309 (44%), Gaps = 9/309 (2%)
Query: 25 QFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYN 84
+ EK+ + + E G +PD +Y + D +L M K++V P+ +
Sbjct: 133 ELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFG 191
Query: 85 LVLGGLCKVRRVKDARKLFDEMLH-RNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKA 143
++ GLCK RVK+A K+ +ML + P Y +LI C++GE+ AF LK
Sbjct: 192 TLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYE 251
Query: 144 PNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVF------DDDSAC 197
+ Y+ L+ L +GR N+ +L EM G P + V ++DS
Sbjct: 252 GKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSES 311
Query: 198 SNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVN 257
+N + D +Y+ +L F R+ + E+A + + G P +SY I+ +
Sbjct: 312 ANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFD 371
Query: 258 AYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAP 317
C E+A ++M +G KP + K CE+G+++ + + L +GIA
Sbjct: 372 GLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISS-LHRGIAG 430
Query: 318 TLETYNSLI 326
+ ++ +I
Sbjct: 431 DADVWSVMI 439
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 147/370 (39%), Gaps = 72/370 (19%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P + N L S F+ L +F +MV+ ++P V++G +
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIH-------------- 195
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLH-RNLVPNTVTYNTLIDGYC 126
GLCK RVK+A K+ +ML + P Y +LI C
Sbjct: 196 ---------------------GLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALC 234
Query: 127 KVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGF 186
++GE+ AF LK + Y+ L+ L +GR N+ +L EM G P
Sbjct: 235 QIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKP--- 291
Query: 187 SRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVV 246
D TY+ L+NGFC E A VL ++VE G+
Sbjct: 292 --------------------------DTVTYNVLINGFCVENDSESANRVLDEMVEKGLK 325
Query: 247 PSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERW 306
P ISYN+++ + E+A E M RG P +++ + + CE + ++A
Sbjct: 326 PDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVI 385
Query: 307 VKKMLEKGIAP---TLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINC 363
+ +ML KG P LE + + G++ K L +G+ + + +I
Sbjct: 386 LDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLH----RGIAGDADVWSVMIPT 441
Query: 364 LCKDRKLLDA 373
+CK+ + D+
Sbjct: 442 MCKEPVISDS 451
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 121/281 (43%), Gaps = 18/281 (6%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVE-SGIRPDVVSYGKAVEAAVMLK 59
M K V P+ + L L + ++ L + DM++ G+RP V Y ++A +
Sbjct: 178 MVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIG 237
Query: 60 DLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYN 119
+L F+L + ++ +Y+ ++ L K R + + +EM + P+TVTYN
Sbjct: 238 ELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYN 297
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN 179
LI+G+C + E A + M +P VI+YN +LG + +A + +M
Sbjct: 298 VLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRR 357
Query: 180 GFLPGGFS-RIVFDDDSACSNGNGSLRANVAARIDERTYS----------ALLNGFCRVG 228
G P S RIVF D C G A +DE + L C G
Sbjct: 358 GCSPDTLSYRIVF--DGLC---EGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESG 412
Query: 229 RIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAI 269
++E +V++ L G+ +++++ C E + +I
Sbjct: 413 KLEILSKVISSL-HRGIAGDADVWSVMIPTMCKEPVISDSI 452
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 152/318 (47%), Gaps = 9/318 (2%)
Query: 76 VGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEK-- 133
VG V VYN ++G + + A++L D M R VP+ +++NTLI+ K G +
Sbjct: 221 VGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNL 280
Query: 134 AFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS-RIVFD 192
A L ++ P ITYN LL ++ A +V +ME + P ++ +
Sbjct: 281 AVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMIS 340
Query: 193 DDSACSNGNGSLRANVAARI-----DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVP 247
C + R + + D TY++LL F R EK KEV ++ + G
Sbjct: 341 VYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGK 400
Query: 248 SQISYNILVNAYCHEGYVEKAIQTAEQMEE-RGLKPSYVTFNTLINKFCETGEVDQAERW 306
+++YN +++ Y +G ++ A+Q + M+ G P +T+ LI+ + +A
Sbjct: 401 DEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAAL 460
Query: 307 VKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCK 366
+ +ML+ GI PTL+TY++LI GY + + + + + G KP+ ++Y +++ L +
Sbjct: 461 MSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLR 520
Query: 367 DRKLLDAEIVLGDMASRG 384
+ A + DM S G
Sbjct: 521 GNETRKAWGLYRDMISDG 538
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 163/351 (46%), Gaps = 19/351 (5%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAV-FTDMVE-SGIRPDVVSYGKAVEAAVML 58
MR+ G +P + S N L + S LAV DMV SG+RPD ++Y + A
Sbjct: 251 MRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRD 310
Query: 59 KDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTY 118
+LD ++ ME R P ++ YN ++ + +A +LF E+ + P+ VTY
Sbjct: 311 SNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTY 370
Query: 119 NTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEG 178
N+L+ + + EK + +M+ +TYN ++ G+++ A ++ +M+G
Sbjct: 371 NSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKG 430
Query: 179 -NGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDE------RTYSALLNGFCRVGRIE 231
+G P + V D +N A ++ +D +TYSAL+ G+ + G+ E
Sbjct: 431 LSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKRE 490
Query: 232 KAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLI 291
+A++ + ++ +G P ++Y+++++ KA M G PSY + +I
Sbjct: 491 EAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMI 550
Query: 292 NKFCETGEVDQAERWVKKMLEK-GIAPTLETYNSLINGYGRISNFVKCFEI 341
+ D ++ ++ M E G+ P LE + L+ G +CF++
Sbjct: 551 LGLMKENRSDDIQKTIRDMEELCGMNP-LEISSVLVKG--------ECFDL 592
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 162/353 (45%), Gaps = 29/353 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M +DG P+V S+N L L + E++ V ++ + G + S ++A +
Sbjct: 813 MMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGN 872
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ + ++ M+ P++ +Y +++ LCK +RV+DA + EM N +N+
Sbjct: 873 IFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNS 932
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
++ Y + + +K + R+K EP TYN L+ C R + ++ +M G
Sbjct: 933 MLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLG 992
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P ++D TY +L++ F + +E+A+++ +L
Sbjct: 993 LDP---------------------------KLD--TYKSLISAFGKQKCLEQAEQLFEEL 1023
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+ G+ + Y+ ++ G KA + + M+ G++P+ T + L+ + +G
Sbjct: 1024 LSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNP 1083
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPN 353
+AE+ + + + + T Y+S+I+ Y R ++ E L E++K+G++P+
Sbjct: 1084 QEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPD 1136
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 169/361 (46%), Gaps = 10/361 (2%)
Query: 16 LFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKER 75
+ E K ++K +V ++ +SG PD+ ++ + A ++ + M ++
Sbjct: 758 IIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDG 817
Query: 76 VGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAF 135
P+V N++L LC R+++ + +E+ + + ++D + + G + +
Sbjct: 818 PSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVK 877
Query: 136 SLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGF-LPGGFSRIVFDDD 194
+ + MKA P++ Y ++ LC RV DA ++ EME F + +
Sbjct: 878 KIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMY 937
Query: 195 SACSNGNGSLRANVAARI-------DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVP 247
+A + +++ V RI DE TY+ L+ +CR R E+ ++ ++ G+ P
Sbjct: 938 TAIEDYKKTVQ--VYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDP 995
Query: 248 SQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWV 307
+Y L++A+ + +E+A Q E++ +GLK ++T++ ++G +AE+ +
Sbjct: 996 KLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLL 1055
Query: 308 KKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKD 367
+ M GI PTL T + L+ Y N + ++L ++ ++ + Y S+I+ +
Sbjct: 1056 QMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRS 1115
Query: 368 R 368
+
Sbjct: 1116 K 1116
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 137/289 (47%), Gaps = 12/289 (4%)
Query: 82 VYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARM 141
+Y ++ K + + A + + P+ T+N+L+ Y + G E+A ++ M
Sbjct: 754 MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTM 813
Query: 142 KAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGN 201
P+V + N LL LC GR+ + V+ E++ GF S I+ D+ GN
Sbjct: 814 MRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISK-SSILLMLDAFARAGN 872
Query: 202 --------GSLRANVAARIDE-RTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISY 252
S++A A + R Y ++ C+ R+ A+ +++++ E +
Sbjct: 873 IFEVKKIYSSMKA--AGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIW 930
Query: 253 NILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLE 312
N ++ Y +K +Q ++++E GL+P T+NTLI +C ++ +++M
Sbjct: 931 NSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRN 990
Query: 313 KGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
G+ P L+TY SLI+ +G+ + ++ EE+ KG+K + Y +++
Sbjct: 991 LGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMM 1039
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 155/370 (41%), Gaps = 28/370 (7%)
Query: 8 PSVRSVNRLFETLVG----SKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDK 63
P+V +++ ++G S +F K + M + G PD++S+ + A + L
Sbjct: 219 PTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTP 278
Query: 64 GF--ELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTL 121
EL+ + + P YN +L + + A K+F++M P+ TYN +
Sbjct: 279 NLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAM 338
Query: 122 IDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGF 181
I Y + G +A L ++ P +TYN LL +EV +M+ GF
Sbjct: 339 ISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGF 398
Query: 182 LPGGFSRIVFDDDSACSNGNGSLRANVAARI------------DERTYSALLNGFCRVGR 229
G + ++ G L ++A ++ D TY+ L++ + R
Sbjct: 399 ---GKDEMTYNTIIHMYGKQGQL--DLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANR 453
Query: 230 IEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNT 289
+A +++++++ G+ P+ +Y+ L+ Y G E+A T M G KP + ++
Sbjct: 454 TVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSV 513
Query: 290 LINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGY---GRISNFVKCFEILEEIE 346
+++ E +A + M+ G P+ Y +I G R + K +EE+
Sbjct: 514 MLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEEL- 572
Query: 347 KKGMKPNVIS 356
GM P IS
Sbjct: 573 -CGMNPLEIS 581
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 118/255 (46%), Gaps = 19/255 (7%)
Query: 146 AEPSV----ITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGN 201
AEP+V YN ++G SG+ + A+E++ M G +P I F+ +
Sbjct: 217 AEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVP---DLISFNTLINARLKS 273
Query: 202 GSLRANVAA-----------RIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQI 250
G L N+A R D TY+ LL+ R ++ A +V + + P
Sbjct: 274 GGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLW 333
Query: 251 SYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKM 310
+YN +++ Y G +A + ++E +G P VT+N+L+ F ++ + ++M
Sbjct: 334 TYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQM 393
Query: 311 LEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEK-KGMKPNVISYGSLINCLCKDRK 369
+ G TYN++I+ YG+ ++ ++++ G P+ I+Y LI+ L K +
Sbjct: 394 QKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANR 453
Query: 370 LLDAEIVLGDMASRG 384
++A ++ +M G
Sbjct: 454 TVEAAALMSEMLDVG 468
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 136/325 (41%), Gaps = 40/325 (12%)
Query: 63 KGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLF--DEMLHRNLVPNTVTYNT 120
+ FEL+ +++ G + ++ CKV + A + D +H ++ Y T
Sbjct: 627 EAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYET 686
Query: 121 LIDGYCKVG-----EMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVE 175
L+ +C V E + FS R+ A SV ++ C G A +V+ +
Sbjct: 687 LL--HCCVANEHYAEASQVFS-DLRLSGCEASESVC--KSMVVVYCKLGFPETAHQVVNQ 741
Query: 176 MEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKE 235
E GF ACS Y+ ++ + + +KA+
Sbjct: 742 AETKGF------------HFACSP----------------MYTDIIEAYGKQKLWQKAES 773
Query: 236 VLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFC 295
V+ L ++G P ++N L++AY G E+A M G P+ + N L++ C
Sbjct: 774 VVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALC 833
Query: 296 ETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVI 355
G +++ V+++ + G + + +++ + R N + +I ++ G P +
Sbjct: 834 VDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIR 893
Query: 356 SYGSLINCLCKDRKLLDAEIVLGDM 380
Y +I LCK +++ DAEI++ +M
Sbjct: 894 LYRMMIELLCKGKRVRDAEIMVSEM 918
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 102/481 (21%), Positives = 181/481 (37%), Gaps = 118/481 (24%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVE-SGIRPDVVSY-------GKA- 51
M+K G + N + Q + L ++ DM SG PD ++Y GKA
Sbjct: 393 MQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKAN 452
Query: 52 --VEAAVMLKD-LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLH 108
VEAA ++ + LD G + P++ Y+ ++ G K + ++A F ML
Sbjct: 453 RTVEAAALMSEMLDVG-----------IKPTLQTYSALICGYAKAGKREEAEDTFSCMLR 501
Query: 109 RNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVND 168
P+ + Y+ ++D + E KA+ L M + PS Y ++ GL R +D
Sbjct: 502 SGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDD 561
Query: 169 AREVLVEMEG-NGFLPGGFSRIV-----FDDDS-----ACSNGNGSLRANVAARIDERTY 217
++ + +ME G P S ++ FD + A +NG ++ T
Sbjct: 562 IQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVAITNG---------YELENDTL 612
Query: 218 SALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYC----------------- 260
++L + GR +A E+L L E+ ++ L+ +C
Sbjct: 613 LSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADPC 672
Query: 261 ---------------------HEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETG- 298
+E Y E A Q + G + S +++ +C+ G
Sbjct: 673 VHGWCFGSSTMYETLLHCCVANEHYAE-ASQVFSDLRLSGCEASESVCKSMVVVYCKLGF 731
Query: 299 ------EVDQAER-----------------------WVK------KMLEKGIAPTLETYN 323
V+QAE W K + + G P L+T+N
Sbjct: 732 PETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWN 791
Query: 324 SLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
SL++ Y + + + I + + G P V S L++ LC D +L + +V+ ++
Sbjct: 792 SLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDM 851
Query: 384 G 384
G
Sbjct: 852 G 852
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 156/343 (45%), Gaps = 41/343 (11%)
Query: 27 EKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCM-----EKERVGPSVF 81
E+ + V+ + + GI VV+ + + + LD+ +EL M + ER+
Sbjct: 162 EEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERI----- 216
Query: 82 VYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARM 141
++ LC V + +L + L + L P Y LI G+C++G + M
Sbjct: 217 --RCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTM 274
Query: 142 KAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGN 201
A N PS+ Y ++ GLC + + +A + ++ G+ P
Sbjct: 275 IAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAP------------------ 316
Query: 202 GSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCH 261
D Y+ ++ GFC G + A+++ ++++ G+ P++ +YN++++ +
Sbjct: 317 -----------DRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFK 365
Query: 262 EGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLET 321
G + +M G + ++ NT+I FC G+ D+A K M E G+ P T
Sbjct: 366 RGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAIT 425
Query: 322 YNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
YN+LI G+ + + K ++ +E++ G+KP+ ++Y +L+ L
Sbjct: 426 YNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 149/363 (41%), Gaps = 34/363 (9%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P S+N LF L+ K K F D +G +P+ + V+ +++ E+
Sbjct: 111 PGPVSLNILFGALLDGKAV-KAAKSFLDT--TGFKPEPTLLEQYVKCLSEEGLVEEAIEV 167
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
++ + SV N VL G K R++ +L EM+ + LI C
Sbjct: 168 YNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERI--RCLIRALCD 225
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
G++ + + L + +P Y L+ G C G EVL M P +
Sbjct: 226 GGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMY- 284
Query: 188 RIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVP 247
Y ++ G C + +A + L + G P
Sbjct: 285 ----------------------------IYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAP 316
Query: 248 SQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWV 307
++ Y ++ +C +G++ A + +M ++G++P+ +N +I+ + GE+ E +
Sbjct: 317 DRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFY 376
Query: 308 KKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKD 367
+ML G T+ + N++I G+ + FEI + + + G+ PN I+Y +LI CK+
Sbjct: 377 NEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKE 436
Query: 368 RKL 370
K+
Sbjct: 437 NKV 439
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 64/135 (47%)
Query: 32 VFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLC 91
++ +M++ G+RP+ +Y + ++ M + G ++ N ++ G C
Sbjct: 340 LWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFC 399
Query: 92 KVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVI 151
+ +A ++F M + PN +TYN LI G+CK ++EK L +KA +PS +
Sbjct: 400 SHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGM 459
Query: 152 TYNCLLGGLCSSGRV 166
Y L+ L S V
Sbjct: 460 AYAALVRNLKMSDSV 474
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 140/312 (44%), Gaps = 32/312 (10%)
Query: 14 NRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEK 73
NR+ +TL S+ VF M + PD+ SY +E +L + E+ M+
Sbjct: 201 NRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKD 260
Query: 74 ERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEK 133
E P V Y +++ CK ++ ++A + F+EM RN P+ + +LI+G ++
Sbjct: 261 EGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLND 320
Query: 134 AFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDD 193
A R K+ TYN L+G C S R+ DA + + EM G P
Sbjct: 321 ALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNA-------- 372
Query: 194 DSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYN 253
RTY +L+ R+ R ++A EV + P+ +Y
Sbjct: 373 ---------------------RTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYE 408
Query: 254 ILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK 313
I+V +C++ ++ AI+ ++M+ +G+ P F++LI C ++D+A + +ML+
Sbjct: 409 IMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDV 468
Query: 314 GIAPTLETYNSL 325
GI P ++ L
Sbjct: 469 GIRPPGHMFSRL 480
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 154/377 (40%), Gaps = 45/377 (11%)
Query: 3 KDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPD----VVS--YGKAVEAAV 56
+ G + + N L E+L KQF+ + ++ DM + ++S Y +A +
Sbjct: 121 QKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKE 180
Query: 57 MLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTV 116
+ K E ME +N +L L K R V DA+K+FD+M + P+
Sbjct: 181 AIGAFHKMEEFGFKMESSD-------FNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIK 233
Query: 117 TYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEM 176
+Y L++G+ + + + + MK EP V+ Y ++ C + + +A EM
Sbjct: 234 SYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEM 293
Query: 177 EGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEV 236
E P + +L+NG ++ A E
Sbjct: 294 EQRNCKPS-----------------------------PHIFCSLINGLGSEKKLNDALEF 324
Query: 237 LAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCE 296
+ +G +YN LV AYC +E A +T ++M +G+ P+ T++ +++
Sbjct: 325 FERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIR 384
Query: 297 TGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVIS 356
+A + M PT+ TY ++ + +I +E++ KG+ P +
Sbjct: 385 MQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHM 441
Query: 357 YGSLINCLCKDRKLLDA 373
+ SLI LC + KL +A
Sbjct: 442 FSSLITALCHENKLDEA 458
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 125/310 (40%), Gaps = 32/310 (10%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+K P ++S L E +V V +M + G PDVV+YG + A K
Sbjct: 223 MKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKK 282
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
++ ME+ PS ++ ++ GL +++ DA + F+ TYN
Sbjct: 283 YEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNA 342
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L+ YC ME A+ M+ P+ TY+ +L L R +A EV M
Sbjct: 343 LVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---- 398
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
S V+ TY ++ FC R++ A ++ ++
Sbjct: 399 ----------------------SCEPTVS------TYEIMVRMFCNKERLDMAIKIWDEM 430
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
GV+P ++ L+ A CHE +++A + +M + G++P F+ L + G
Sbjct: 431 KGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRK 490
Query: 301 DQAERWVKKM 310
D+ V KM
Sbjct: 491 DKVTDLVVKM 500
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 135/299 (45%), Gaps = 30/299 (10%)
Query: 83 YNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMK 142
YN ++ L K+++ K L D+M + L+ T+ + Y + ++++A +M+
Sbjct: 131 YNALIESLGKIKQFKLIWSLVDDMKAKKLLSKE-TFALISRRYARARKVKEAIGAFHKME 189
Query: 143 APNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNG 202
+ +N +L L S V DA++V +M+ F P
Sbjct: 190 EFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEP------------------- 230
Query: 203 SLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHE 262
D ++Y+ LL G+ + + + EV ++ + G P ++Y I++NA+C
Sbjct: 231 ----------DIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKA 280
Query: 263 GYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETY 322
E+AI+ +ME+R KPS F +LIN +++ A + ++ G TY
Sbjct: 281 KKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTY 340
Query: 323 NSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMA 381
N+L+ Y ++ ++E+ KG+ PN +Y +++ L + ++ +A V M+
Sbjct: 341 NALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS 399
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 93/170 (54%), Gaps = 7/170 (4%)
Query: 217 YSALLNGFCRVGRIEKAKEVLAKLVEN---GVVPSQISYNILVNAYCHEGYVEKAIQTAE 273
Y+AL+ +G+I++ K ++ LV++ + S+ ++ ++ Y V++AI
Sbjct: 131 YNALIES---LGKIKQFK-LIWSLVDDMKAKKLLSKETFALISRRYARARKVKEAIGAFH 186
Query: 274 QMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRIS 333
+MEE G K FN +++ ++ V A++ KM +K P +++Y L+ G+G+
Sbjct: 187 KMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQEL 246
Query: 334 NFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
N ++ E+ E++ +G +P+V++YG +IN CK +K +A +M R
Sbjct: 247 NLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQR 296
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 111/271 (40%), Gaps = 30/271 (11%)
Query: 114 NTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVL 173
T YN LI+ K+ + + +SL MKA S T+ + + +V +A
Sbjct: 127 TTSNYNALIESLGKIKQFKLIWSLVDDMKAKKL-LSKETFALISRRYARARKVKEAIGAF 185
Query: 174 VEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKA 233
+ME GF +++ ++ +L+ + + A
Sbjct: 186 HKMEEFGF-----------------------------KMESSDFNRMLDTLSKSRNVGDA 216
Query: 234 KEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINK 293
++V K+ + P SY IL+ + E + + + +M++ G +P V + +IN
Sbjct: 217 QKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINA 276
Query: 294 FCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPN 353
C+ + ++A R+ +M ++ P+ + SLING G E E + G
Sbjct: 277 HCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLE 336
Query: 354 VISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+Y +L+ C +++ DA + +M +G
Sbjct: 337 APTYNALVGAYCWSQRMEDAYKTVDEMRLKG 367
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 74/165 (44%), Gaps = 7/165 (4%)
Query: 17 FETLVG----SKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCME 72
+ LVG S++ E +M G+ P+ +Y + + ++ + +E+ M
Sbjct: 340 YNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS 399
Query: 73 KERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEME 132
E P+V Y +++ C R+ A K++DEM + ++P +++LI C +++
Sbjct: 400 CE---PTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLD 456
Query: 133 KAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEME 177
+A M P ++ L L GR + +++V+M+
Sbjct: 457 EACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMD 501
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 169/371 (45%), Gaps = 13/371 (3%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P++ + N L S+ E V + ESG+ D Y + + +D FE+
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEV 524
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
M V ++ + ++ G + +V A + + +N+ P+ V +N LI +
Sbjct: 525 FHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQ 584
Query: 128 VGEMEKAFSLKARMKAPNA--EPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGF--LP 183
G +++AF + A MKA +P I+ L+ C++G+V A+EV + G P
Sbjct: 585 SGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTP 644
Query: 184 GGFSRIVF------DDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVL 237
++ V D D ACS +V DE +SAL++ +++A +L
Sbjct: 645 EVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTP--DEVFFSALIDVAGHAKMLDEAFGIL 702
Query: 238 AKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCET 297
G+ ISY+ L+ A C+ +KA++ E+++ L+P+ T N LI CE
Sbjct: 703 QDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEG 762
Query: 298 GEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISY 357
++ +A ++ ++ G+ P TY+ L+ R +F F++L + + G+ PN+I
Sbjct: 763 NQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLI-M 821
Query: 358 GSLINCLCKDR 368
I LCK R
Sbjct: 822 CRCITSLCKRR 832
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 158/347 (45%), Gaps = 17/347 (4%)
Query: 33 FTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCK 92
FT ++ + P + ++ + +D++ ++ +++ + +Y ++ K
Sbjct: 458 FTKLI---LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAK 514
Query: 93 VRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVIT 152
+V ++F +M + + N T+ LIDG + G++ KAF +++ N +P +
Sbjct: 515 SGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVV 574
Query: 153 YNCLLGGLCSSGRVNDAREVLVEM--EGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAA 210
+N L+ SG V+ A +VL EM E + P S + AC N RA
Sbjct: 575 FNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHIS--IGALMKACCNAGQVERAKEVY 632
Query: 211 RIDER--------TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHE 262
++ + Y+ +N + G + A + + E V P ++ ++ L++ H
Sbjct: 633 QMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHA 692
Query: 263 GYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETY 322
+++A + + +G++ +++++L+ C + +A +K+ + PT+ T
Sbjct: 693 KMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTM 752
Query: 323 NSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRK 369
N+LI + K E L+EI+ G+KPN I+Y L+ L +RK
Sbjct: 753 NALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLM--LASERK 797
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 1/161 (0%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M++ V P + L + +K ++ + D GIR +SY + A KD
Sbjct: 670 MKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKD 729
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
K EL ++ ++ P++ N ++ LC+ ++ A + DE+ L PNT+TY+
Sbjct: 730 WKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSM 789
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLC 161
L+ + + E +F L ++ K P++I C+ LC
Sbjct: 790 LMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCIT-SLC 829
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 145/310 (46%), Gaps = 27/310 (8%)
Query: 75 RVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKA 134
+ P + +N++L LCK VK+ L M HR + P+ T+N L G+C+V + +KA
Sbjct: 229 KTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKA 287
Query: 135 FSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDD 194
L M +P TY + C +G V++A ++ M G
Sbjct: 288 MKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKG-------------- 333
Query: 195 SACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNI 254
SA S +T++ ++ + + E+ E++ +++ G +P +Y
Sbjct: 334 SAVSAPTA------------KTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKD 381
Query: 255 LVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKG 314
++ C V++A + ++M +G P VT+N + CE + D+A + +M+E
Sbjct: 382 VIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESR 441
Query: 315 IAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAE 374
AP+++TYN LI+ + + + F E++K+ +V +Y ++IN L + +A
Sbjct: 442 CAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEAC 501
Query: 375 IVLGDMASRG 384
+L ++ ++G
Sbjct: 502 FLLEEVVNKG 511
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 137/313 (43%), Gaps = 33/313 (10%)
Query: 42 RPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARK 101
+P++ ++ ++A + +G L+ M + RV P +N++ G C+VR K A K
Sbjct: 231 QPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDPKKAMK 289
Query: 102 LFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKA---FSLKARMKAPNAEPSVITYNCLLG 158
L +EM+ P TY ID +C+ G +++A F + + P+ T+ ++
Sbjct: 290 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIV 349
Query: 159 GLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYS 218
L + + + E++ M G LP D TY
Sbjct: 350 ALAKNDKAEECFELIGRMISTGCLP-----------------------------DVSTYK 380
Query: 219 ALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEER 278
++ G C ++++A + L ++ G P ++YN + C ++A++ +M E
Sbjct: 381 DVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVES 440
Query: 279 GLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKC 338
PS T+N LI+ F E + D A +M ++ +ETY ++ING +
Sbjct: 441 RCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEA 500
Query: 339 FEILEEIEKKGMK 351
+LEE+ KG+K
Sbjct: 501 CFLLEEVVNKGLK 513
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 141/343 (41%), Gaps = 33/343 (9%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P + + N L + L ++ A+ M ++PD ++ ++D K +L
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDPKKAMKL 290
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRN---LVPNTVTYNTLIDG 124
+ M + P F Y + C+ V +A LFD M+ + P T+ +I
Sbjct: 291 LEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVA 350
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
K + E+ F L RM + P V TY ++ G+C + +V++A + L EM G+ P
Sbjct: 351 LAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPP- 409
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
D TY+ L C + ++A ++ ++VE+
Sbjct: 410 ----------------------------DIVTYNCFLRVLCENRKTDEALKLYGRMVESR 441
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
PS +YN+L++ + + A T +M++R T+ +IN + +A
Sbjct: 442 CAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEAC 501
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEK 347
+++++ KG+ ++S + + N ++ E ++K
Sbjct: 502 FLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMKK 544
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 137/322 (42%), Gaps = 39/322 (12%)
Query: 3 KDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEA---AVMLK 59
+ V P + N LF + +K + + +M+E+G +P+ +Y A++ A M+
Sbjct: 261 RHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVD 320
Query: 60 DLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYN 119
+ F+ M P+ + L++ L K + ++ +L M+ +P+ TY
Sbjct: 321 EAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYK 380
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN 179
+I+G C ++++A+ M P ++TYNC L LC + + ++A ++
Sbjct: 381 DVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKL------- 433
Query: 180 GFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAK 239
+ R+V +S C+ +TY+ L++ F + + A +
Sbjct: 434 ------YGRMV---ESRCAPS-------------VQTYNMLISMFFEMDDPDGAFNTWTE 471
Query: 240 LVENGVVPSQISYNILVNAY--CHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCET 297
+ + V +Y ++N CH ++A E++ +GLK Y F++ + + E
Sbjct: 472 MDKRDCVQDVETYCAMINGLFDCHRA--KEACFLLEEVVNKGLKLPYRVFDSFLMRLSEV 529
Query: 298 GE---VDQAERWVKKMLEKGIA 316
G + + +KK +A
Sbjct: 530 GNLKAIHKVSEHMKKFYNHSMA 551
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 37/202 (18%)
Query: 220 LLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYV-------------- 265
+L +C K K + P ++N+L++A C G V
Sbjct: 205 ILRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRV 264
Query: 266 --------------------EKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAER 305
+KA++ E+M E G KP T+ I+ FC+ G VD+A
Sbjct: 265 KPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAAD 324
Query: 306 WVKKMLEKG---IAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLIN 362
M+ KG APT +T+ +I + +CFE++ + G P+V +Y +I
Sbjct: 325 LFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIE 384
Query: 363 CLCKDRKLLDAEIVLGDMASRG 384
+C K+ +A L +M+++G
Sbjct: 385 GMCMAEKVDEAYKFLDEMSNKG 406
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 57/124 (45%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G LP V + + E + +++ ++ +M G PD+V+Y + +
Sbjct: 367 MISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRK 426
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
D+ +L G M + R PSV YN+++ ++ A + EM R+ V + TY
Sbjct: 427 TDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCA 486
Query: 121 LIDG 124
+I+G
Sbjct: 487 MING 490
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 170/356 (47%), Gaps = 31/356 (8%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P ++ +LF+ L KQ ++ +F M+ G++P + Y + + LDK F
Sbjct: 142 PRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFST 201
Query: 68 MGCMEK-ERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYC 126
+ M+ P VF + +++ CK+ R + + EM + + +TVTYNT+IDGY
Sbjct: 202 LEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYG 261
Query: 127 KVGEMEKAFSLKARM-KAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGG 185
K G E+ S+ A M + ++ P V T N ++G S G + R+ +
Sbjct: 262 KAGMFEEMESVLADMIEDGDSLPDVCTLNSIIG---SYGNGRNMRK----------MESW 308
Query: 186 FSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGV 245
+SR + + D T++ L+ F + G +K V+ + +
Sbjct: 309 YSRFQL----------------MGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFF 352
Query: 246 VPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAER 305
+ ++YNI++ + G +EK +M+ +G+KP+ +T+ +L+N + + G V + +
Sbjct: 353 SLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDS 412
Query: 306 WVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
+++++ + +N +IN YG+ + E+ ++E++ KP+ I++ ++I
Sbjct: 413 VLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMI 468
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 152/371 (40%), Gaps = 77/371 (20%)
Query: 50 KAVEAAVMLKDLDKGFELMGCMEKER-VGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLH 108
+A++ A+ ++ + K+ P Y + L ++ A LF+ ML
Sbjct: 113 EALDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLS 172
Query: 109 RNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKA-PNAEPSVITYNCLLGGLCSSGRVN 167
L P Y +LI Y K ++KAFS MK+ + +P V T+ L+ C GR +
Sbjct: 173 EGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFD 232
Query: 168 DAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRV 227
+ +++EM +L G S + TY+ +++G+ +
Sbjct: 233 LVKSIVLEM---SYLGVGCSTV--------------------------TYNTIIDGYGKA 263
Query: 228 GRIEKAKEVLAKLVENG------------------------------------VVPSQIS 251
G E+ + VLA ++E+G V P +
Sbjct: 264 GMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITT 323
Query: 252 YNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKML 311
+NIL+ ++ G +K + ME+R + VT+N +I F + G +++ + +KM
Sbjct: 324 FNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMK 383
Query: 312 EKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLL 371
+G+ P TY SL+N Y + VK +L +I + +V+ NC ++
Sbjct: 384 YQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQI----VNSDVVLDTPFFNC------II 433
Query: 372 DAEIVLGDMAS 382
+A GD+A+
Sbjct: 434 NAYGQAGDLAT 444
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 111/279 (39%), Gaps = 44/279 (15%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIR-PDVV-------SYGKAVEAAV 56
GV S + N + + + FE++ +V DM+E G PDV SYG
Sbjct: 245 GVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRK 304
Query: 57 MLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTV 116
M + F+LMG V P + +N+++ K K + D M R TV
Sbjct: 305 M-ESWYSRFQLMG------VQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTV 357
Query: 117 TYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEM 176
TYN +I+ + K G +EK + +MK +P+ ITY L+ +G V VL ++
Sbjct: 358 TYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQI 417
Query: 177 EGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEV 236
N +D ++ ++N + + G + KE+
Sbjct: 418 -----------------------------VNSDVVLDTPFFNCIINAYGQAGDLATMKEL 448
Query: 237 LAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQM 275
++ E P +I++ ++ Y G + + +QM
Sbjct: 449 YIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQM 487
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 81/173 (46%), Gaps = 1/173 (0%)
Query: 213 DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTA 272
D T++ L++ C++GR + K ++ ++ GV S ++YN +++ Y G E+
Sbjct: 214 DVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVL 273
Query: 273 EQMEERGLK-PSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGR 331
M E G P T N++I + + + E W + G+ P + T+N LI +G+
Sbjct: 274 ADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGK 333
Query: 332 ISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ K +++ +EK+ ++Y +I K ++ + V M +G
Sbjct: 334 AGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQG 386
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 86/178 (48%), Gaps = 1/178 (0%)
Query: 1 MRKDG-VLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLK 59
M +DG LP V ++N + + + K+ + ++ G++PD+ ++ + +
Sbjct: 276 MIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAG 335
Query: 60 DLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYN 119
K +M MEK + YN+V+ K R++ +F +M ++ + PN++TY
Sbjct: 336 MYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYC 395
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEME 177
+L++ Y K G + K S+ ++ + +NC++ +G + +E+ ++ME
Sbjct: 396 SLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQME 453
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 155/361 (42%), Gaps = 65/361 (18%)
Query: 60 DLDKGFELMGCMEKE-RVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTY 118
D + L+ + +E + PSVF YN+VL + + ++ A LFDEM R L P+ TY
Sbjct: 134 DWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTY 193
Query: 119 NTLIDGYCKVG----------EME-------------------------KAFSLKARMKA 143
+TLI + K G +ME KA S+ +R+K
Sbjct: 194 STLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKR 253
Query: 144 PNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGS 203
P ++ YN ++ + +AR ++ EM G LP S
Sbjct: 254 SGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVS---------------- 297
Query: 204 LRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEG 263
YS LL+ + + +A V A++ E + NI+++ Y
Sbjct: 298 -------------YSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLD 344
Query: 264 YVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYN 323
V++A + + + ++P+ V++NT++ + E +A + M K I + TYN
Sbjct: 345 MVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYN 404
Query: 324 SLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
++I YG+ K +++E++ +G++PN I+Y ++I+ K KL A + + S
Sbjct: 405 TMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSS 464
Query: 384 G 384
G
Sbjct: 465 G 465
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 160/354 (45%), Gaps = 29/354 (8%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
PSV + N + ++ +KQF+ +F +M + + PD +Y + + D
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
+ ME++RV + +Y+ ++ ++ A +F + + P+ V YN++I+ Y K
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
+A L M P+ ++Y+ LL + + +A V EM+
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMK---------- 322
Query: 188 RIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVP 247
V +D T + +++ + ++ +++A + L + + P
Sbjct: 323 -------------------EVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEP 363
Query: 248 SQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWV 307
+ +SYN ++ Y +AI M+ + ++ + VT+NT+I + +T E ++A V
Sbjct: 364 NVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLV 423
Query: 308 KKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
++M +GI P TY+++I+ +G+ + + +++ G++ + + Y ++I
Sbjct: 424 QEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMI 477
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/421 (19%), Positives = 173/421 (41%), Gaps = 37/421 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
MR+ + P + + L + F+ L+ M + + D+V Y +E + L D
Sbjct: 181 MRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCD 240
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
K + +++ + P + YN ++ K + ++AR L EM ++PNTV+Y+T
Sbjct: 241 YSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYST 300
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L+ Y + + +A S+ A MK N + T N ++ V +A + +
Sbjct: 301 LLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMD 360
Query: 181 FLPG--GFSRI--VFDDDSACSNGNGSLRANVAARIDER--TYSALLNGFCRVGRIEKAK 234
P ++ I V+ + R I++ TY+ ++ + + EKA
Sbjct: 361 IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKAT 420
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
++ ++ G+ P+ I+Y+ +++ + G +++A +++ G++ V + T+I +
Sbjct: 421 NLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAY 480
Query: 295 CETGEVDQAER------------------------------WV-KKMLEKGIAPTLETYN 323
G + A+R WV ++ E G + +
Sbjct: 481 ERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFG 540
Query: 324 SLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
+IN Y R +V E+ E++ G P+ ++N K R+ A+ V +M
Sbjct: 541 CMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEE 600
Query: 384 G 384
G
Sbjct: 601 G 601
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 181/397 (45%), Gaps = 23/397 (5%)
Query: 3 KDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLD 62
KD V SV T + + E +++F + E +S+ ++ V +L+
Sbjct: 80 KDSVFASV------IRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELE 133
Query: 63 KGFELMG--CMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ C E V + NL++ LC+V R A ++F EM ++ P+ +Y
Sbjct: 134 AACHIFRKYCYGWE-VNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRI 192
Query: 121 LIDGYCKVGEMEKA----FSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEM 176
L+ G+C G++E+A +S+ R+ + ++ Y LL LC +G V+DA E+L ++
Sbjct: 193 LMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKI 252
Query: 177 EGNGFLPGG--FSRIVFDDDSACSNGNGSLRANVAARIDE------RTYSALLNGFCRVG 228
G + I + S G ++ + + +YSA+ G
Sbjct: 253 LRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEG 312
Query: 229 RIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTA-EQMEERGLKPSYVTF 287
++ + +EVL + G P+ Y V A C G +++A+ ++M + P+ +
Sbjct: 313 KLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVY 372
Query: 288 NTLINKFCETGEVDQAERWVKKMLEK-GIAPTLETYNSLINGYGRISNFVKCFEILEEIE 346
N LI C+ G+ +A ++KKM ++ ETY +L++G R F++ +++EE+
Sbjct: 373 NVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEML 432
Query: 347 KKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
K P V +Y +I LC + +A + L +M S+
Sbjct: 433 IKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQ 469
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 133/310 (42%), Gaps = 36/310 (11%)
Query: 82 VYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSL-KAR 140
V+ V+ + R++DA LF + N V +++++TL+ K E+E A + +
Sbjct: 83 VFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKY 142
Query: 141 MKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNG 200
+ N L+ LC R + A +V EM G P
Sbjct: 143 CYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYP----------------- 185
Query: 201 NGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVL----AKLVENGVVPSQISYNILV 256
D +Y L+ GFC G++E+A +L ++ + G + Y IL+
Sbjct: 186 ------------DRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILL 233
Query: 257 NAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGE--VDQAERWVKKMLEKG 314
+A C G V+ AI+ ++ +GLK ++ + E+ +++ +R + + L +G
Sbjct: 234 DALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRG 293
Query: 315 IAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAE 374
P L++Y+++ V+ E+L + KG +P YG+ + LC+ KL +A
Sbjct: 294 AIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAV 353
Query: 375 IVLGDMASRG 384
V+ +G
Sbjct: 354 SVINKEMMQG 363
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/335 (19%), Positives = 132/335 (39%), Gaps = 49/335 (14%)
Query: 10 VRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMG 69
+ ++N L + L + + VF +M G PD SY ++ + L++ L+
Sbjct: 152 ITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLY 211
Query: 70 CM----EKERVGPSVFVYNLVLGGLCKVRRVKDA-------------------------- 99
M ++ G + VY ++L LC V DA
Sbjct: 212 SMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGH 271
Query: 100 -----------RKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEP 148
++L E L R +P +Y+ + + G++ + + M++ EP
Sbjct: 272 WESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEP 331
Query: 149 SVITYNCLLGGLCSSGRVNDAREVLVE--MEGNGFLPGGFSRIVFD---DDSACSNGNGS 203
+ Y + LC +G++ +A V+ + M+G+ G ++ DD G
Sbjct: 332 TPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGY 391
Query: 204 LRA---NVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYC 260
L+ V+ +E TY L++G CR G+ +A +V+ +++ P +Y++++ C
Sbjct: 392 LKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLC 451
Query: 261 HEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFC 295
+A+ E+M + + P + L C
Sbjct: 452 DMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 2/181 (1%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G +P + S + + L + + V M G P YG V+A L +
Sbjct: 293 GAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEA 352
Query: 65 FELMGC-MEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHR-NLVPNTVTYNTLI 122
++ M + P+V VYN+++ GLC + +A +M + + V N TY TL+
Sbjct: 353 VSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLV 412
Query: 123 DGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFL 182
DG C+ G+ +A + M + P V TY+ ++ GLC R +A L EM +
Sbjct: 413 DGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMV 472
Query: 183 P 183
P
Sbjct: 473 P 473
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 181/397 (45%), Gaps = 23/397 (5%)
Query: 3 KDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLD 62
KD V SV T + + E +++F + E +S+ ++ V +L+
Sbjct: 80 KDSVFASV------IRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELE 133
Query: 63 KGFELMG--CMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ C E V + NL++ LC+V R A ++F EM ++ P+ +Y
Sbjct: 134 AACHIFRKYCYGWE-VNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRI 192
Query: 121 LIDGYCKVGEMEKA----FSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEM 176
L+ G+C G++E+A +S+ R+ + ++ Y LL LC +G V+DA E+L ++
Sbjct: 193 LMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKI 252
Query: 177 EGNGFLPGG--FSRIVFDDDSACSNGNGSLRANVAARIDE------RTYSALLNGFCRVG 228
G + I + S G ++ + + +YSA+ G
Sbjct: 253 LRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEG 312
Query: 229 RIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTA-EQMEERGLKPSYVTF 287
++ + +EVL + G P+ Y V A C G +++A+ ++M + P+ +
Sbjct: 313 KLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVY 372
Query: 288 NTLINKFCETGEVDQAERWVKKMLEK-GIAPTLETYNSLINGYGRISNFVKCFEILEEIE 346
N LI C+ G+ +A ++KKM ++ ETY +L++G R F++ +++EE+
Sbjct: 373 NVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEML 432
Query: 347 KKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
K P V +Y +I LC + +A + L +M S+
Sbjct: 433 IKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQ 469
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 133/310 (42%), Gaps = 36/310 (11%)
Query: 82 VYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSL-KAR 140
V+ V+ + R++DA LF + N V +++++TL+ K E+E A + +
Sbjct: 83 VFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKY 142
Query: 141 MKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNG 200
+ N L+ LC R + A +V EM G P
Sbjct: 143 CYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYP----------------- 185
Query: 201 NGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVL----AKLVENGVVPSQISYNILV 256
D +Y L+ GFC G++E+A +L ++ + G + Y IL+
Sbjct: 186 ------------DRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILL 233
Query: 257 NAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGE--VDQAERWVKKMLEKG 314
+A C G V+ AI+ ++ +GLK ++ + E+ +++ +R + + L +G
Sbjct: 234 DALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRG 293
Query: 315 IAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAE 374
P L++Y+++ V+ E+L + KG +P YG+ + LC+ KL +A
Sbjct: 294 AIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAV 353
Query: 375 IVLGDMASRG 384
V+ +G
Sbjct: 354 SVINKEMMQG 363
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/335 (19%), Positives = 132/335 (39%), Gaps = 49/335 (14%)
Query: 10 VRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMG 69
+ ++N L + L + + VF +M G PD SY ++ + L++ L+
Sbjct: 152 ITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLY 211
Query: 70 CM----EKERVGPSVFVYNLVLGGLCKVRRVKDA-------------------------- 99
M ++ G + VY ++L LC V DA
Sbjct: 212 SMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGH 271
Query: 100 -----------RKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEP 148
++L E L R +P +Y+ + + G++ + + M++ EP
Sbjct: 272 WESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEP 331
Query: 149 SVITYNCLLGGLCSSGRVNDAREVLVE--MEGNGFLPGGFSRIVFD---DDSACSNGNGS 203
+ Y + LC +G++ +A V+ + M+G+ G ++ DD G
Sbjct: 332 TPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGY 391
Query: 204 LRA---NVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYC 260
L+ V+ +E TY L++G CR G+ +A +V+ +++ P +Y++++ C
Sbjct: 392 LKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLC 451
Query: 261 HEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFC 295
+A+ E+M + + P + L C
Sbjct: 452 DMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 2/181 (1%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G +P + S + + L + + V M G P YG V+A L +
Sbjct: 293 GAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEA 352
Query: 65 FELMGC-MEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHR-NLVPNTVTYNTLI 122
++ M + P+V VYN+++ GLC + +A +M + + V N TY TL+
Sbjct: 353 VSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLV 412
Query: 123 DGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFL 182
DG C+ G+ +A + M + P V TY+ ++ GLC R +A L EM +
Sbjct: 413 DGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMV 472
Query: 183 P 183
P
Sbjct: 473 P 473
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 127/287 (44%), Gaps = 32/287 (11%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P S N + +L+G KQ++ + V+ M+E G PDV++Y + A L D+ + L
Sbjct: 220 PYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRL 279
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
+ M K+ P ++ YN++L L + A L + M + P + + TLIDG +
Sbjct: 280 LDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSR 339
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
G++E P V+ Y ++ G S G + A E+ EM G LP F
Sbjct: 340 AGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVF- 398
Query: 188 RIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVP 247
TY++++ GFC G+ ++A +L ++ G P
Sbjct: 399 ----------------------------TYNSMIRGFCMAGKFKEACALLKEMESRGCNP 430
Query: 248 SQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
+ + Y+ LVN + G V +A + + M E+G YV + + K+
Sbjct: 431 NFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG---HYVHLISKLKKY 474
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 139/336 (41%), Gaps = 30/336 (8%)
Query: 67 LMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYC 126
+ C +E + Y+L++ + K +L DEM+ T+N LI C
Sbjct: 139 FVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI---C 195
Query: 127 KVGEMEKAFSLKARM---KAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP 183
GE A + + K N P +YN +L L + V +M +GF P
Sbjct: 196 TCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTP 255
Query: 184 ---------------GGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVG 228
G R+ D +G D TY+ LL+
Sbjct: 256 DVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSP---------DLYTYNILLHHLATGN 306
Query: 229 RIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFN 288
+ A +L + E GV P I + L++ G +E ++ + G P V +
Sbjct: 307 KPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYT 366
Query: 289 TLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKK 348
+I + GE+++AE K+M EKG P + TYNS+I G+ F + +L+E+E +
Sbjct: 367 VMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESR 426
Query: 349 GMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
G PN + Y +L+N L K+L+A V+ DM +G
Sbjct: 427 GCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 65/134 (48%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
MR+ GV P V L + L + + E + V+ G PDVV Y + + +
Sbjct: 318 MREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGE 377
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L+K E+ M ++ P+VF YN ++ G C + K+A L EM R PN V Y+T
Sbjct: 378 LEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYST 437
Query: 121 LIDGYCKVGEMEKA 134
L++ G++ +A
Sbjct: 438 LVNNLKNAGKVLEA 451
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 156/319 (48%), Gaps = 23/319 (7%)
Query: 79 SVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTL---IDGYCKVGEMEKAF 135
SV Y+ ++ L K+R+ A L DEM R P+ V TL I YC V ++ KA
Sbjct: 160 SVREYHSMISILGKMRKFDTAWTLIDEM--RKFSPSLVNSQTLLIMIRKYCAVHDVGKAI 217
Query: 136 SLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDARE-VLVEMEGNGFLPGGFSRIVFDDD 194
+ K E + + LL LC V+DA + + F F+ ++
Sbjct: 218 NTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVL---- 273
Query: 195 SACSNGNGSLR---------ANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGV 245
+ N GS R NV + D +YS++++ + + G + K ++ ++ + +
Sbjct: 274 NGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECI 333
Query: 246 VPSQISYNILVNAYCHEGYVEKAIQTAEQMEE-RGLKPSYVTFNTLINKFCETGEVDQAE 304
P + YN +V+A +V +A + MEE +G++P+ VT+N+LI C+ + ++A+
Sbjct: 334 EPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAK 393
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
+ +MLEKG+ PT+ TY++ + + + FE+L ++ K G +P V +Y LI L
Sbjct: 394 QVFDEMLEKGLFPTIRTYHAFMRI---LRTGEEVFELLAKMRKMGCEPTVETYIMLIRKL 450
Query: 365 CKDRKLLDAEIVLGDMASR 383
C+ R + ++ +M +
Sbjct: 451 CRWRDFDNVLLLWDEMKEK 469
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 126/272 (46%), Gaps = 32/272 (11%)
Query: 83 YNLVLGGLCKV-RRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARM 141
+N+VL G C V ++A +++ EM + + + V+Y+++I Y K G + K L RM
Sbjct: 269 FNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRM 328
Query: 142 KAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGN 201
K EP YN ++ L + V++AR ++ ME
Sbjct: 329 KKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEK--------------------- 367
Query: 202 GSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCH 261
+ NV TY++L+ C+ + E+AK+V +++E G+ P+ +Y+ +
Sbjct: 368 -GIEPNVV------TYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRI-LR 419
Query: 262 EGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLET 321
G E+ + +M + G +P+ T+ LI K C + D +M EK + P L +
Sbjct: 420 TG--EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSS 477
Query: 322 YNSLINGYGRISNFVKCFEILEEIEKKGMKPN 353
Y +I+G + + +E++ KGM+PN
Sbjct: 478 YIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 123/270 (45%), Gaps = 33/270 (12%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
GV V S + + KVL +F M + I PD Y V A + +
Sbjct: 297 GVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEA 356
Query: 65 FELMGCMEKER-VGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLID 123
LM ME+E+ + P+V YN ++ LCK R+ ++A+++FDEML + L P TY+ +
Sbjct: 357 RNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFM- 415
Query: 124 GYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP 183
+ G E+ F L A+M+ EP+V TY L+ LC R D VL
Sbjct: 416 RILRTG--EEVFELLAKMRKMGCEPTVETYIMLIRKLC---RWRDFDNVL---------- 460
Query: 184 GGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVEN 243
+++D+ + G D +Y +++G G+IE+A ++ +
Sbjct: 461 -----LLWDEMKEKTVGP-----------DLSSYIVMIHGLFLNGKIEEAYGYYKEMKDK 504
Query: 244 GVVPSQISYNILVNAYCHEGYVEKAIQTAE 273
G+ P++ +++ + + + Y E+ I ++
Sbjct: 505 GMRPNENVEDMIQSWFSGKQYAEQRITDSK 534
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 104/198 (52%), Gaps = 7/198 (3%)
Query: 190 VFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQ 249
V D A + + R + ID+ + +LL+ CR + A ++ P
Sbjct: 210 VHDVGKAINTFHAYKRFKLEMGIDD--FQSLLSALCRYKNVSDAGHLI--FCNKDKYPFD 265
Query: 250 I-SYNILVNAYCHE-GYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWV 307
S+NI++N +C+ G +A + +M G+K V+++++I+ + + G +++ +
Sbjct: 266 AKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLF 325
Query: 308 KKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEK-KGMKPNVISYGSLINCLCK 366
+M ++ I P + YN++++ + S + +++ +E+ KG++PNV++Y SLI LCK
Sbjct: 326 DRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCK 385
Query: 367 DRKLLDAEIVLGDMASRG 384
RK +A+ V +M +G
Sbjct: 386 ARKTEEAKQVFDEMLEKG 403
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 155/327 (47%), Gaps = 39/327 (11%)
Query: 64 GFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLID 123
F++ E+ P+ Y L L LCK + A + ++ML ++ +I
Sbjct: 250 AFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIIT 309
Query: 124 GYCKVGEMEKAFSLK--ARMKAPNAEPSVITYNCLLGGLC-SSGRVNDAREVLVEMEGNG 180
+CK G+ E+A+S+ A+ K + P + L+ LC + G + A+E+L ++ G
Sbjct: 310 WFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITALCKNDGTITFAQEMLGDLSGE- 366
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
A R + +S +++ CR+ ++ AK +L +
Sbjct: 367 ----------------------------ARRRGIKPFSDVIHSLCRMRNVKDAKALLLDM 398
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
+ G P +N++V+A G +++A + + ME RGLKP T+ +I+ + + G +
Sbjct: 399 ISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMM 458
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
D+A+ + + +K + TY++LI GY +I + + ++L E+++ G++PN Y L
Sbjct: 459 DEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKL 518
Query: 361 INCLCKDRKLLD---AEIVLGDMASRG 384
I C K LD AE++ +M +G
Sbjct: 519 IQSFC--LKALDWEKAEVLFEEMKQKG 543
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 66 ELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGY 125
E++G + E + ++ V+ LC++R VKDA+ L +M+ + P +N ++
Sbjct: 358 EMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHAC 417
Query: 126 CKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGG 185
K G++++A + M++ +P V TY ++ G G +++A+E+L E +
Sbjct: 418 SKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKH----- 472
Query: 186 FSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGV 245
++ TY AL+ G+C++ ++A ++L ++ GV
Sbjct: 473 ------------------------KKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGV 508
Query: 246 VPSQISYNILVNAYCHEGY-VEKAIQTAEQMEERGL 280
P+ YN L+ ++C + EKA E+M+++GL
Sbjct: 509 QPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGL 544
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 8/176 (4%)
Query: 2 RKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDL 61
R+ G+ P + + +L + + A+ DM+ G P + V A DL
Sbjct: 368 RRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDL 423
Query: 62 DKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEML--HRNLVPNTVTYN 119
D+ E++ ME + P V+ Y +++ G K + +A+++ E H+ L P VTY+
Sbjct: 424 DEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSP--VTYH 481
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVE 175
LI GYCK+ E ++A L M +P+ YN L+ C + EVL E
Sbjct: 482 ALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFE 537
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
Query: 40 GIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDA 99
GI+P + + + ++++ L+ M + P V+NLV+ K + +A
Sbjct: 371 GIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEA 426
Query: 100 RKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGG 159
+++ M R L P+ TY +I GY K G M++A + A K + + S +TY+ L+ G
Sbjct: 427 KEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRG 486
Query: 160 LCSSGRVNDAREVLVEMEGNGFLPGG 185
C ++A ++L EM+ G P
Sbjct: 487 YCKIEEYDEALKLLNEMDRFGVQPNA 512
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 36 MVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRR 95
M G++PDV +Y + +D+ E++ +K+ S Y+ ++ G CK+
Sbjct: 433 MESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEE 492
Query: 96 VKDARKLFDEMLHRNLVPNTVTYNTLIDGYC-KVGEMEKAFSLKARMK 142
+A KL +EM + PN YN LI +C K + EKA L MK
Sbjct: 493 YDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMK 540
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 152/328 (46%), Gaps = 10/328 (3%)
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
FEL+ E+ P+V +Y ++ L K ++ + A +LF EM++ V N Y L+
Sbjct: 137 FELL--REQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSA 194
Query: 125 YCKVGEMEKAFSLKARMKAP-NAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP 183
Y + G + AF+L RMK+ N +P V TY+ L+ + +++L +M G P
Sbjct: 195 YSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRP 254
Query: 184 GGFSRIVFDDDSACSNGNGSLRANVAARI-------DERTYSALLNGFCRVGRIEKAKEV 236
+ D + + + + + D T ++ L F G+IE +
Sbjct: 255 NTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENC 314
Query: 237 LAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCE 296
K +G+ P+ ++NIL+++Y G +K E M++ + VT+N +I+ F
Sbjct: 315 YEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR 374
Query: 297 TGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVIS 356
G++ Q E + M + I P+ T SL+ YGR S K +L IE ++ +++
Sbjct: 375 AGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVF 434
Query: 357 YGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ L++ + K + + VL M +G
Sbjct: 435 FNCLVDAYGRMEKFAEMKGVLELMEKKG 462
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 147/367 (40%), Gaps = 53/367 (14%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P+V +L L KQ EK +F +M+ G + Y V A D F L
Sbjct: 148 PNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTL 207
Query: 68 MGCMEKER-VGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYC 126
+ M+ P V Y++++ +V + L +M + + PNT+TYNTLID Y
Sbjct: 208 LERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYG 267
Query: 127 KVG---EMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP 183
K EME +L + + +P T N L +G++ + + +G P
Sbjct: 268 KAKMFVEMES--TLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEP 325
Query: 184 G--GFSRIVFDDDSACSNGNGSLRANVAARIDER-------TYSALLNGFCRVGRIEKAK 234
F+ ++ DS +GN + V + + TY+ +++ F R G +++ +
Sbjct: 326 NIRTFNILL---DSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQME 382
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
+ + + PS ++ LV AY +K +E ++ V FN L
Sbjct: 383 YLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCL---- 438
Query: 295 CETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNV 354
++ YGR+ F + +LE +EKKG KP+
Sbjct: 439 -------------------------------VDAYGRMEKFAEMKGVLELMEKKGFKPDK 467
Query: 355 ISYGSLI 361
I+Y +++
Sbjct: 468 ITYRTMV 474
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 113/266 (42%), Gaps = 42/266 (15%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMV-ESGIRPDVVSYGKAVEA----- 54
MR+ G+ P+ + N L + +K F ++ + M+ E +PD + + A
Sbjct: 247 MRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNG 306
Query: 55 -AVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVP 113
M+++ + F+ G + P++ +N++L K K + + M +
Sbjct: 307 QIEMMENCYEKFQSSG------IEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSW 360
Query: 114 NTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVL 173
VTYN +ID + + G++++ L M++ PS +T L+ GR + A ++
Sbjct: 361 TIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAY---GRASKADKI- 416
Query: 174 VEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKA 233
GG R + + D R+D ++ L++ + R+ + +
Sbjct: 417 ----------GGVLRFIENSD---------------IRLDLVFFNCLVDAYGRMEKFAEM 451
Query: 234 KEVLAKLVENGVVPSQISYNILVNAY 259
K VL + + G P +I+Y +V AY
Sbjct: 452 KGVLELMEKKGFKPDKITYRTMVKAY 477
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 152/352 (43%), Gaps = 29/352 (8%)
Query: 32 VFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLC 91
VF + + G V++ + + K D + + C +R+ P+ +++ LC
Sbjct: 186 VFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLC 245
Query: 92 KVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVI 151
K R+K+ L D + + +P+ + +L+ + +E++ SL R+ N I
Sbjct: 246 KEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTI 305
Query: 152 TYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAAR 211
Y+ ++ G + AR+V EM GF F
Sbjct: 306 GYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSF------------------------- 340
Query: 212 IDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQT 271
Y+ + C G +++A+ +L+++ E+GV P ++N L+ + G+ EK ++
Sbjct: 341 ----VYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEY 396
Query: 272 AEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGR 331
E M RGL PS FN ++ + V++A + K ++KG P TY+ LI G+
Sbjct: 397 CEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIE 456
Query: 332 ISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
++ + ++ E+E + M P + SLI LC K+ E L M R
Sbjct: 457 GNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKR 508
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 129/282 (45%), Gaps = 39/282 (13%)
Query: 53 EAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLV 112
E+ +LK L LM M + +G S+ VY G + ARK+FDEML R
Sbjct: 287 ESMSLLKRL-----LMKNMVVDTIGYSIVVYAKAKEG-----DLVSARKVFDEMLQRGFS 336
Query: 113 PNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREV 172
N+ Y + C+ G++++A L + M+ P T+NCL+GG G E
Sbjct: 337 ANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEY 396
Query: 173 LVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEK 232
M G +P +CS ++ ++ ++ + +
Sbjct: 397 CEVMVTRGLMP------------SCS-----------------AFNEMVKSVSKIENVNR 427
Query: 233 AKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLIN 292
A E+L K ++ G VP + +Y+ L+ + +++A++ +ME R + P + F +LI
Sbjct: 428 ANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIV 487
Query: 293 KFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISN 334
C G+V+ E+++K M ++ I P + Y++LI + +I +
Sbjct: 488 GLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGD 529
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 126/286 (44%), Gaps = 29/286 (10%)
Query: 81 FVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKAR 140
V++L++ K+R ++ +F + + +T NTLI K + + +
Sbjct: 165 LVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYEC 224
Query: 141 MKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNG 200
P+ IT ++ LC GR+ + ++L + G LP S IV
Sbjct: 225 AIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLP---SVIV---------- 271
Query: 201 NGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYC 260
N SL V + RIE++ +L +L+ +V I Y+I+V A
Sbjct: 272 NTSLVFRVLEEM----------------RIEESMSLLKRLLMKNMVVDTIGYSIVVYAKA 315
Query: 261 HEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLE 320
EG + A + ++M +RG + + + CE G+V +AER + +M E G++P E
Sbjct: 316 KEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDE 375
Query: 321 TYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCK 366
T+N LI G+ R K E E + +G+ P+ ++ ++ + K
Sbjct: 376 TFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSK 421
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + GV P + N L EK L MV G+ P ++ + V++ +++
Sbjct: 365 MEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIEN 424
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+++ E++ + P Y+ ++ G + + A KLF EM +R + P + +
Sbjct: 425 VNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRS 484
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEM 176
LI G C G++E MK EP+ Y+ L+ G +A V EM
Sbjct: 485 LIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEM 540
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 138/319 (43%), Gaps = 68/319 (21%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P S N + +L+G KQ++ + V+ M+E G PDV++
Sbjct: 217 PFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLT-------------------- 256
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
YN++L ++ ++ +LFDEM P++ TYN L+ K
Sbjct: 257 ---------------YNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGK 301
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
+ A + MK +PSV+ Y L+ GL +G + + L EM G P
Sbjct: 302 GNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRP---- 357
Query: 188 RIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVP 247
D C Y+ ++ G+ G ++KAKE+ ++ G +P
Sbjct: 358 ------DVVC-------------------YTVMITGYVVSGELDKAKEMFREMTVKGQLP 392
Query: 248 SQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWV 307
+ +YN ++ C G +A ++ME RG P++V ++TL++ + G++ +A + +
Sbjct: 393 NVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVI 452
Query: 308 KKMLEKG----IAPTLETY 322
++M++KG + P + Y
Sbjct: 453 REMVKKGHYVHLVPKMMKY 471
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 144/319 (45%), Gaps = 6/319 (1%)
Query: 72 EKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEM 131
E+E +V Y+L++ + K +L DEM+ T+N LI + G
Sbjct: 141 EQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLA 200
Query: 132 EKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG--GFSRI 189
++A + K N P +YN +L L + V +M +GF P ++ +
Sbjct: 201 KQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNIL 260
Query: 190 VFDDDSACSNGNGSLRANVAAR----IDERTYSALLNGFCRVGRIEKAKEVLAKLVENGV 245
++ + + AR D TY+ LL+ + + A L + E G+
Sbjct: 261 LWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGI 320
Query: 246 VPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAER 305
PS + Y L++ G +E ++M + G +P V + +I + +GE+D+A+
Sbjct: 321 DPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKE 380
Query: 306 WVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLC 365
++M KG P + TYNS+I G F + +L+E+E +G PN + Y +L++ L
Sbjct: 381 MFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLR 440
Query: 366 KDRKLLDAEIVLGDMASRG 384
K KL +A V+ +M +G
Sbjct: 441 KAGKLSEARKVIREMVKKG 459
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 112/262 (42%), Gaps = 45/262 (17%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M +DG P V + N L T + ++ +F +M G PD +Y ++L
Sbjct: 245 MLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYN------ILLHI 298
Query: 61 LDKG------FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPN 114
L KG + M++ + PSV Y ++ GL + ++ + DEM+ P+
Sbjct: 299 LGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPD 358
Query: 115 TVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLV 174
V Y +I GY GE++KA + M P+V TYN ++ GLC +G +A +L
Sbjct: 359 VVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLK 418
Query: 175 EMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAK 234
EME G P YS L++ + G++ +A+
Sbjct: 419 EMESRGCNPNFV-----------------------------VYSTLVSYLRKAGKLSEAR 449
Query: 235 EVLAKLVENG----VVPSQISY 252
+V+ ++V+ G +VP + Y
Sbjct: 450 KVIREMVKKGHYVHLVPKMMKY 471
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 156/350 (44%), Gaps = 34/350 (9%)
Query: 7 LPSVRSVNRLFETLVGSKQFEKVLAVFTDMVES-GIRPDVVSYGKAVEAAVMLKDLDKGF 65
L ++ +++++ L S ++ K + F +M +S G++ D ++ ++A V ++
Sbjct: 200 LVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAH 259
Query: 66 ELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGY 125
E+ + + + P +N+++ G CK R+ DAR + D M P+ VTY + ++ Y
Sbjct: 260 EVFLKL-FDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAY 318
Query: 126 CKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGG 185
CK G+ + + M+ P+V+TY ++ L S +V +A V +M+ +G +P
Sbjct: 319 CKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVP-- 376
Query: 186 FSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGV 245
D + YS+L++ + GR + A E+ + GV
Sbjct: 377 ---------------------------DAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGV 409
Query: 246 VPSQISYNILVNAYCHEGYVEKAIQTAEQMEE---RGLKPSYVTFNTLINKFCETGEVDQ 302
+ YN +++A H E A++ ++ME+ P+ T+ L+ C ++
Sbjct: 410 RRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKL 469
Query: 303 AERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKP 352
+ M++ ++ + TY LI G + EE +KGM P
Sbjct: 470 LGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVP 519
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 120/256 (46%), Gaps = 10/256 (3%)
Query: 117 TYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCL---LGGLCSSGRVNDAREVL 173
TYN ++D K + + L M N E ++T + + + L SG+ N A +
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNK-NEESKLVTLDTMSKVMRRLAKSGKYNKAVDAF 226
Query: 174 VEME------GNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRV 227
+EME + + ++S L+ + D RT++ L++GFC+
Sbjct: 227 LEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKA 286
Query: 228 GRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTF 287
+ + A+ ++ + P ++Y V AYC EG + + E+M E G P+ VT+
Sbjct: 287 RKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTY 346
Query: 288 NTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEK 347
+++ ++ +V +A +KM E G P + Y+SLI+ + F EI E++
Sbjct: 347 TIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTN 406
Query: 348 KGMKPNVISYGSLINC 363
+G++ +V+ Y ++I+
Sbjct: 407 QGVRRDVLVYNTMISA 422
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 3/137 (2%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M++DG +P + + L L + +F+ +F DM G+R DV+ Y + AA+
Sbjct: 369 MKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSR 428
Query: 61 LDKGFELMGCMEKER---VGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVT 117
+ L+ ME E P+V Y +L C +++K L M+ ++ + T
Sbjct: 429 DEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVST 488
Query: 118 YNTLIDGYCKVGEMEKA 134
Y LI G C G++E+A
Sbjct: 489 YILLIRGLCMSGKVEEA 505
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 75/186 (40%), Gaps = 3/186 (1%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
MR++G P+V + + +L SKQ + L V+ M E G PD Y +
Sbjct: 334 MRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGR 393
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLH---RNLVPNTVT 117
E+ M + V V VYN ++ R + A +L M + PN T
Sbjct: 394 FKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVET 453
Query: 118 YNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEME 177
Y L+ C +M+ L M + V TY L+ GLC SG+V +A E
Sbjct: 454 YAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAV 513
Query: 178 GNGFLP 183
G +P
Sbjct: 514 RKGMVP 519
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 141/283 (49%), Gaps = 34/283 (12%)
Query: 106 MLHRNLVPNTVTYNTLIDGYCKVGEM-EKAFSLKA--RMKAPNAEPSVITYNCLLGGLCS 162
+L + P++ Y TL+ GY K G + + A L+A R N+ P +TY ++ +
Sbjct: 405 LLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVN 464
Query: 163 SGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLN 222
+G ++ AR+VL EM G +P A RI TY+ LL
Sbjct: 465 AGLMDRARQVLAEMARMG-VP-------------------------ANRI---TYNVLLK 495
Query: 223 GFCRVGRIEKAKEVLAKLVEN-GVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLK 281
G+C+ +I++A+++L ++ E+ G+ P +SYNI+++ A+ +M RG+
Sbjct: 496 GYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIA 555
Query: 282 PSYVTFNTLINKFCETGEVDQAERWVKKML-EKGIAPTLETYNSLINGYGRISNFVKCFE 340
P+ +++ TL+ F +G+ A R +M+ + + L +N L+ GY R+
Sbjct: 556 PTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQR 615
Query: 341 ILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
++ +++ G PNV +YGSL N + + RK DA ++ ++ R
Sbjct: 616 VVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKER 658
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 135/312 (43%), Gaps = 32/312 (10%)
Query: 77 GPSVFVYNLVLGGLCKVRRVKDARKLFDEMLH---RNLVPNTVTYNTLIDGYCKVGEMEK 133
P +Y ++ G K RV D ++ + M RN P+ VTY T++ + G M++
Sbjct: 411 APDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDR 470
Query: 134 AFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEM-EGNGFLPGGFSR---- 188
A + A M + ITYN LL G C +++ A ++L EM E G P S
Sbjct: 471 ARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIII 530
Query: 189 ---IVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGV 245
I+ DD + +R A + +Y+ L+ F G+ + A V +++ +
Sbjct: 531 DGCILIDDSAGALAFFNEMRTRGIAPT-KISYTTLMKAFAMSGQPKLANRVFDEMMNDPR 589
Query: 246 VPSQ-ISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
V I++N+LV YC G +E A + +M+E G P+ T+ +L N + + A
Sbjct: 590 VKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDAL 649
Query: 305 RWVKKMLEK---------------GIAPTLETYNSLINGYG----RISNFVKCFEILEEI 345
K++ E+ P L+ L++ R + F K EI+ +
Sbjct: 650 LLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACM 709
Query: 346 EKKGMKPNVISY 357
E+ G+ PN Y
Sbjct: 710 EENGIPPNKTKY 721
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 152/349 (43%), Gaps = 37/349 (10%)
Query: 42 RPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARK 101
RPD ++ + A L D DK ++L M + P V YN+++ +V R +
Sbjct: 233 RPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVF 292
Query: 102 LFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLC 161
+ + ++ + + T ++L+ Y G++ A + M+ + + C L
Sbjct: 293 VLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLK 352
Query: 162 S---------------------SGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNG 200
S R + E +V++ F +++ +S +G
Sbjct: 353 EKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDV---------FKKLL--PNSVDPSG 401
Query: 201 NGSLRANVAARIDERTYSALLNGFCRVGRIEKAK---EVLAKLVENGVVPSQISYNILVN 257
L V A D R Y+ L+ G+ + GR+ E + + + P +++Y +V+
Sbjct: 402 EPPLLPKVFAP-DSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVS 460
Query: 258 AYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK-GIA 316
A+ + G +++A Q +M G+ + +T+N L+ +C+ ++D+AE +++M E GI
Sbjct: 461 AFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIE 520
Query: 317 PTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLC 365
P + +YN +I+G I + E+ +G+ P ISY +L+
Sbjct: 521 PDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA 569
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 116/254 (45%), Gaps = 12/254 (4%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVE-SGIRPDVVSYGKAVEAAVMLK 59
M + GV + + N L + Q ++ + +M E +GI PDVVSY ++ +++
Sbjct: 478 MARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILID 537
Query: 60 DLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVP-NTVTY 118
D M + P+ Y ++ + K A ++FDEM++ V + + +
Sbjct: 538 DSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAW 597
Query: 119 NTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEG 178
N L++GYC++G +E A + +RMK P+V TY L G+ + + DA + E++
Sbjct: 598 NMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIK- 656
Query: 179 NGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLA 238
R A S+ + S A + DE L + R +KA E++A
Sbjct: 657 --------ERCAVKKKEAPSD-SSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIA 707
Query: 239 KLVENGVVPSQISY 252
+ ENG+ P++ Y
Sbjct: 708 CMEENGIPPNKTKY 721
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 133/330 (40%), Gaps = 21/330 (6%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P + + V + ++ V +M G+ + ++Y ++ +D+ +L
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509
Query: 68 MGCM-EKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYC 126
+ M E + P V YN+++ G + A F+EM R + P ++Y TL+ +
Sbjct: 510 LREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA 569
Query: 127 KVGEMEKAFSL-KARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP-- 183
G+ + A + M P + +I +N L+ G C G + DA+ V+ M+ NGF P
Sbjct: 570 MSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNV 629
Query: 184 GGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVEN 243
+ + A G+ L + I ER C V + E + +
Sbjct: 630 ATYGSLANGVSQARKPGDALL---LWKEIKER---------CAVKKKEAPSDSSSDPAPP 677
Query: 244 GVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLI----NKFCETGE 299
+ P + + L + + +KA++ MEE G+ P+ + + ++ +
Sbjct: 678 MLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIYVEMHSRMFTSKH 737
Query: 300 VDQAERWVKKMLEKGIAPTLETYNSLINGY 329
QA R +++ K A + + L N Y
Sbjct: 738 ASQA-RIDRRVERKRAAEAFKFWLGLPNSY 766
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 168/381 (44%), Gaps = 35/381 (9%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAV---M 57
+ K G P+V S L E+ + A+F M SG P ++Y ++ V
Sbjct: 165 LSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDK 224
Query: 58 LKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVT 117
K+ ++ FE + +K + P +Y++++ K + ARK+F M+ + + +TVT
Sbjct: 225 FKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVT 284
Query: 118 YNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEME 177
YN+L+ E+ K + +M+ + +P V++Y L+ + R +A V EM
Sbjct: 285 YNSLMSFETSYKEVSKIYD---QMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEML 341
Query: 178 GNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVL 237
G P + Y+ LL+ F G +E+AK V
Sbjct: 342 DAGVRP-----------------------------THKAYNILLDAFAISGMVEQAKTVF 372
Query: 238 AKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCET 297
+ + + P SY +++AY + +E A + ++++ G +P+ VT+ TLI + +
Sbjct: 373 KSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKA 432
Query: 298 GEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISY 357
+V++ +KM GI ++++ GR NF +E+E G+ P+ +
Sbjct: 433 NDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAK 492
Query: 358 GSLINCLCKDRKLLDAEIVLG 378
L++ +L +A+ + G
Sbjct: 493 NVLLSLASTQDELEEAKELTG 513
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 128/304 (42%), Gaps = 39/304 (12%)
Query: 84 NLVLGGLCKVRRVKD---ARKLFDEMLHRNLVP-NTVTYNTLIDGYCKVGEMEKAFSLKA 139
+LVLG L + +++K ++ + + ++N + + + LI Y K+G A + +
Sbjct: 104 DLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLS 163
Query: 140 RMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSN 199
+ + P+VI+Y L+ G+ N+A + M+ +G P
Sbjct: 164 VLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAI------------- 210
Query: 200 GNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVE---NGVVPSQISYNILV 256
TY +L F + ++A+EV L++ + + P Q Y++++
Sbjct: 211 ----------------TYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMI 254
Query: 257 NAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIA 316
Y G EKA + M +G+ S VT+N+L++ EV + +M I
Sbjct: 255 YMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKI---YDQMQRSDIQ 311
Query: 317 PTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIV 376
P + +Y LI YGR + + EE+ G++P +Y L++ + A+ V
Sbjct: 312 PDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTV 371
Query: 377 LGDM 380
M
Sbjct: 372 FKSM 375
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 108/254 (42%), Gaps = 13/254 (5%)
Query: 5 GVLPSVRSVNRL--FETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLD 62
GV S + N L FET +++V ++ M S I+PDVVSY ++A + +
Sbjct: 277 GVPQSTVTYNSLMSFET-----SYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREE 331
Query: 63 KGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLI 122
+ + M V P+ YN++L V+ A+ +F M + P+ +Y T++
Sbjct: 332 EALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTML 391
Query: 123 DGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFL 182
Y +ME A R+K EP+++TY L+ G + V EV +M +G
Sbjct: 392 SAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIK 451
Query: 183 PG-GFSRIVFDDDSACSNGNGSL-----RANVAARIDERTYSALLNGFCRVGRIEKAKEV 236
+ D C N +L + D++ + LL+ +E+AKE+
Sbjct: 452 ANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Query: 237 LAKLVENGVVPSQI 250
E + +++
Sbjct: 512 TGIRNETATIIARV 525
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 91/172 (52%), Gaps = 6/172 (3%)
Query: 216 TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQM 275
+Y+AL+ + R G+ A+ + ++ +G PS I+Y I++ + ++A + E +
Sbjct: 176 SYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETL 235
Query: 276 ---EERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRI 332
++ LKP ++ +I + + G ++A + M+ KG+ + TYNSL++
Sbjct: 236 LDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFE--- 292
Query: 333 SNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+++ + +I +++++ ++P+V+SY LI + R+ +A V +M G
Sbjct: 293 TSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAG 344
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 168/381 (44%), Gaps = 35/381 (9%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAV---M 57
+ K G P+V S L E+ + A+F M SG P ++Y ++ V
Sbjct: 172 LSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDK 231
Query: 58 LKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVT 117
K+ ++ FE + +K + P +Y++++ K + ARK+F M+ + + +TVT
Sbjct: 232 FKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVT 291
Query: 118 YNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEME 177
YN+L+ E+ K + +M+ + +P V++Y L+ + R +A V EM
Sbjct: 292 YNSLMSFETSYKEVSKIYD---QMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEML 348
Query: 178 GNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVL 237
G P + Y+ LL+ F G +E+AK V
Sbjct: 349 DAGVRP-----------------------------THKAYNILLDAFAISGMVEQAKTVF 379
Query: 238 AKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCET 297
+ + + P SY +++AY + +E A + ++++ G +P+ VT+ TLI + +
Sbjct: 380 KSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKA 439
Query: 298 GEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISY 357
+V++ +KM GI ++++ GR NF +E+E G+ P+ +
Sbjct: 440 NDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAK 499
Query: 358 GSLINCLCKDRKLLDAEIVLG 378
L++ +L +A+ + G
Sbjct: 500 NVLLSLASTQDELEEAKELTG 520
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 128/304 (42%), Gaps = 39/304 (12%)
Query: 84 NLVLGGLCKVRRVKD---ARKLFDEMLHRNLVP-NTVTYNTLIDGYCKVGEMEKAFSLKA 139
+LVLG L + +++K ++ + + ++N + + + LI Y K+G A + +
Sbjct: 111 DLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLS 170
Query: 140 RMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSN 199
+ + P+VI+Y L+ G+ N+A + M+ +G P
Sbjct: 171 VLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAI------------- 217
Query: 200 GNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVE---NGVVPSQISYNILV 256
TY +L F + ++A+EV L++ + + P Q Y++++
Sbjct: 218 ----------------TYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMI 261
Query: 257 NAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIA 316
Y G EKA + M +G+ S VT+N+L++ EV + +M I
Sbjct: 262 YMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKI---YDQMQRSDIQ 318
Query: 317 PTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIV 376
P + +Y LI YGR + + EE+ G++P +Y L++ + A+ V
Sbjct: 319 PDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTV 378
Query: 377 LGDM 380
M
Sbjct: 379 FKSM 382
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 108/254 (42%), Gaps = 13/254 (5%)
Query: 5 GVLPSVRSVNRL--FETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLD 62
GV S + N L FET +++V ++ M S I+PDVVSY ++A + +
Sbjct: 284 GVPQSTVTYNSLMSFET-----SYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREE 338
Query: 63 KGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLI 122
+ + M V P+ YN++L V+ A+ +F M + P+ +Y T++
Sbjct: 339 EALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTML 398
Query: 123 DGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFL 182
Y +ME A R+K EP+++TY L+ G + V EV +M +G
Sbjct: 399 SAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIK 458
Query: 183 PG-GFSRIVFDDDSACSNGNGSL-----RANVAARIDERTYSALLNGFCRVGRIEKAKEV 236
+ D C N +L + D++ + LL+ +E+AKE+
Sbjct: 459 ANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
Query: 237 LAKLVENGVVPSQI 250
E + +++
Sbjct: 519 TGIRNETATIIARV 532
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 91/172 (52%), Gaps = 6/172 (3%)
Query: 216 TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQM 275
+Y+AL+ + R G+ A+ + ++ +G PS I+Y I++ + ++A + E +
Sbjct: 183 SYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETL 242
Query: 276 ---EERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRI 332
++ LKP ++ +I + + G ++A + M+ KG+ + TYNSL++
Sbjct: 243 LDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFE--- 299
Query: 333 SNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+++ + +I +++++ ++P+V+SY LI + R+ +A V +M G
Sbjct: 300 TSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAG 351
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 133/302 (44%), Gaps = 21/302 (6%)
Query: 97 KDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCL 156
K R LF EM + + T+ +I Y + G A MK PS T+ CL
Sbjct: 695 KQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCL 754
Query: 157 LGGLC-SSGR-VNDAREVLVEMEGNGFLPGGFSRIVFD------------DDSACSNGNG 202
+ LC GR V +A EM +GF+P +V D D +C + G
Sbjct: 755 ITVLCEKKGRNVEEATRTFREMIRSGFVPD--RELVQDYLGCLCEVGNTKDAKSCLDSLG 812
Query: 203 SLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHE 262
+ V YS + CR+G++E+A LA + Q +Y +V+
Sbjct: 813 KIGFPVTV-----AYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQR 867
Query: 263 GYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETY 322
G ++KA+ M+E G KP + +LI F + ++++ +KM + P++ TY
Sbjct: 868 GDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTY 927
Query: 323 NSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMAS 382
++I GY + + + +E++G P+ +Y INCLC+ K DA +L +M
Sbjct: 928 TAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLD 987
Query: 383 RG 384
+G
Sbjct: 988 KG 989
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 178/428 (41%), Gaps = 53/428 (12%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
++K G P V + + + L KQFEK +F +M+E+GI PD V+ V +
Sbjct: 424 IKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNR 483
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ + +++ ME++ + P+ Y++ + LC+ R + K+F++M +V ++
Sbjct: 484 VAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSW 543
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNA----------------EPSVITYNCL-------- 156
+I K GE EK +K K N+ E V YNC
Sbjct: 544 VISSMEKNGEKEKIHLIKEIQKRSNSYCDELNGSGKAEFSQEEELVDDYNCPQLVQQSAL 603
Query: 157 -----------LGGLC---SSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNG 202
+ +C SS R + + +E F P ++ A GN
Sbjct: 604 PPALSAVDKMDVQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEVL---RHAKIQGNA 660
Query: 203 SLR--ANVAARIDERTYSALLNGFCRVG----RIEKAKEVLAKLVENGVVPSQISYNILV 256
LR + V R + S N +V ++ + + ++ G + +Q ++ I++
Sbjct: 661 VLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMI 720
Query: 257 NAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETG--EVDQAERWVKKMLEKG 314
Y G AI+T ++M++ GL PS TF LI CE V++A R ++M+ G
Sbjct: 721 MQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSG 780
Query: 315 IAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAE 374
P E + + N L+ + K G P ++Y I LC+ KL +A
Sbjct: 781 FVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEA- 838
Query: 375 IVLGDMAS 382
L ++AS
Sbjct: 839 --LSELAS 844
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 160/363 (44%), Gaps = 46/363 (12%)
Query: 24 KQFEKVLAVFTDMVESG--IRPD-----VVSYGKAVEAAVMLKDLDKGFELMGCMEKERV 76
K F+++ ++F +M G I D ++ YG+ + ++ K + MG +
Sbjct: 692 KDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTF-KEMKDMGLI----- 745
Query: 77 GPSVFVYNLVLGGLC--KVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKA 134
PS + ++ LC K R V++A + F EM+ VP+ + C+VG + A
Sbjct: 746 -PSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDA 804
Query: 135 FSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDD 194
S + P + Y+ + LC G++ +A L EG L
Sbjct: 805 KSCLDSL-GKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSL------------ 851
Query: 195 SACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNI 254
+D+ TY ++++G + G ++KA + + + E G P Y
Sbjct: 852 -----------------LDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTS 894
Query: 255 LVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKG 314
L+ + E +EK ++T ++ME +PS VT+ +I + G+V++A + M E+G
Sbjct: 895 LIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERG 954
Query: 315 IAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAE 374
+P +TY+ IN + ++L E+ KG+ P+ I++ ++ L ++ K A
Sbjct: 955 TSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLAR 1014
Query: 375 IVL 377
I L
Sbjct: 1015 IAL 1017
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/363 (19%), Positives = 156/363 (42%), Gaps = 24/363 (6%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K+G +R+ L +K+ K L VF M +SG D +Y + + +
Sbjct: 215 MEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGR 274
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
D E M ++ + + Y ++L + K +V + + D+M+ + +
Sbjct: 275 GDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGY 334
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L+ +C G++++A L +K + L+ GLC + R+ DA E++ M+
Sbjct: 335 LLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRK 394
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDER--------------TYSALLNGFCR 226
I+ +G LR N ++ E+ TY+ ++ +
Sbjct: 395 LDDSNVYGIII---------SGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFK 445
Query: 227 VGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVT 286
+ + EK + +++ENG+ P ++ +V + + V +A + MEE+G+KP++ +
Sbjct: 446 LKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKS 505
Query: 287 FNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIE 346
++ + + C + D+ + +M I + ++ +I+ + K +++EI+
Sbjct: 506 YSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKEK-IHLIKEIQ 564
Query: 347 KKG 349
K+
Sbjct: 565 KRS 567
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/368 (19%), Positives = 152/368 (41%), Gaps = 30/368 (8%)
Query: 2 RKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDL 61
+KDG V N + ++ + V + ++M ++G D+ ++ + K +
Sbjct: 181 QKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKI 240
Query: 62 DKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTL 121
KG + M K YN+++ LC R A + + EM+ + + TY L
Sbjct: 241 GKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKML 300
Query: 122 IDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGF 181
+D K +++ S+ M + LL C SG++ +A E++ E++
Sbjct: 301 LDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELK---- 356
Query: 182 LPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLV 241
N +D + + L+ G CR R+ A E++ +
Sbjct: 357 -------------------------NKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMK 391
Query: 242 ENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVD 301
+ S + Y I+++ Y + V KA++ E +++ G P T+ ++ + + +
Sbjct: 392 RRKLDDSNV-YGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFE 450
Query: 302 QAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
+ +M+E GI P +++ G+ + + +++ +E+KG+KP SY +
Sbjct: 451 KGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFV 510
Query: 362 NCLCKDRK 369
LC+ +
Sbjct: 511 KELCRSSR 518
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 129/317 (40%), Gaps = 56/317 (17%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSK--QFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVML 58
M+ G++PS + L L K E+ F +M+ SG PD
Sbjct: 739 MKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPD-------------- 784
Query: 59 KDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTY 118
++L + + LG LC+V KDA+ D L + P TV Y
Sbjct: 785 RELVQDY---------------------LGCLCEVGNTKDAKSCLDS-LGKIGFPVTVAY 822
Query: 119 NTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEG 178
+ I C++G++E+A S A + + TY ++ GL G + A + + M+
Sbjct: 823 SIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKE 882
Query: 179 NGFLPGGF---SRIV--FDDDS------ACSNGNG-SLRANVAARIDERTYSALLNGFCR 226
G PG S IV F + C G S +V TY+A++ G+
Sbjct: 883 IGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVV------TYTAMICGYMS 936
Query: 227 VGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVT 286
+G++E+A + E G P +Y+ +N C E A++ +M ++G+ PS +
Sbjct: 937 LGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTIN 996
Query: 287 FNTLINKFCETGEVDQA 303
F T+ G+ D A
Sbjct: 997 FRTVFYGLNREGKHDLA 1013
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 118/299 (39%), Gaps = 30/299 (10%)
Query: 72 EKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEM 131
+K+ V +YN +L + R + +L EM + T+ LI Y K ++
Sbjct: 181 QKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKI 240
Query: 132 EKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVF 191
K + +M+ E YN ++ LC +GR + A E EM G G
Sbjct: 241 GKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGL------ 294
Query: 192 DDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQIS 251
RTY LL+ + +++ + + +V + +
Sbjct: 295 -----------------------RTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDA 331
Query: 252 YNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKML 311
+ L+ ++C G +++A++ +++ + + F L+ C + A V M
Sbjct: 332 FGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMK 391
Query: 312 EKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKL 370
+ + + Y +I+GY R ++ K E E I+K G P V +Y ++ L K ++
Sbjct: 392 RRKLDDS-NVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQF 449
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/391 (19%), Positives = 150/391 (38%), Gaps = 65/391 (16%)
Query: 48 YGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEML 107
YG + + D+ K E ++K P V Y ++ L K+++ + LF+EM+
Sbjct: 401 YGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMI 460
Query: 108 HRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVN 167
+ P++V ++ G+ + +A+ + + M+ +P+ +Y+ + LC S R +
Sbjct: 461 ENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYD 520
Query: 168 DAREVLVEMEGNGFLPGGFSRIVFDDD------SACSNGNGSLRANVAARIDER--TYSA 219
+ ++ +M S+IV DD S+ + ++ I +R +Y
Sbjct: 521 EIIKIFNQMHA--------SKIVIRDDIFSWVISSMEKNGEKEKIHLIKEIQKRSNSYCD 572
Query: 220 LLNGFCRVGRIEKAKEV-------LAKLVENGVVPSQISY--NILVNAYC---------- 260
LNG G+ E ++E +LV+ +P +S + V C
Sbjct: 573 ELNG---SGKAEFSQEEELVDDYNCPQLVQQSALPPALSAVDKMDVQEICRVLSSSRDWE 629
Query: 261 --HEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETG-------------------- 298
E + +Q ++ L+ + + N ++ F G
Sbjct: 630 RTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAG 689
Query: 299 ---EVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVI 355
+ Q +M +G T +T+ +I YGR +E++ G+ P+
Sbjct: 690 CGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSS 749
Query: 356 SYGSLINCLC--KDRKLLDAEIVLGDMASRG 384
++ LI LC K R + +A +M G
Sbjct: 750 TFKCLITVLCEKKGRNVEEATRTFREMIRSG 780
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 82/171 (47%)
Query: 213 DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTA 272
D RT++ L++ + + +I K V K+ ++G +YNI++ + C G + A++
Sbjct: 223 DIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFY 282
Query: 273 EQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRI 332
++M E+G+ T+ L++ ++ +VD + M+ + + L+ +
Sbjct: 283 KEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVS 342
Query: 333 SNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
+ E++ E++ K M + + L+ LC+ +++DA ++ M R
Sbjct: 343 GKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRR 393
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 163/345 (47%), Gaps = 37/345 (10%)
Query: 33 FTDMVESGIRPDVVSY-------GKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNL 85
F+DM +G+ P+ +++ G + L DL G+ +++ V V
Sbjct: 59 FSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHV----MVGTA 114
Query: 86 VLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPN 145
++G K R K AR +FD M +N +VT+NT+IDGY + G+++ A A+M
Sbjct: 115 IIGMYSKRGRFKKARLVFDYMEDKN----SVTWNTMIDGYMRSGQVDNA----AKMFDKM 166
Query: 146 AEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSN-GNGSL 204
E +I++ ++ G G +A EM+ +G P + I + AC+N G S
Sbjct: 167 PERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALN--ACTNLGALSF 224
Query: 205 RANVAARI-------DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVN 257
V + + R ++L++ +CR G +E A++V + + VV S+N ++
Sbjct: 225 GLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVV----SWNSVIV 280
Query: 258 AYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKM-LEKGIA 316
+ G +++ +M+E+G KP VTF + G V++ R+ + M + I+
Sbjct: 281 GFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRIS 340
Query: 317 PTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
P +E Y L++ Y R ++++ + MKPN + GSL+
Sbjct: 341 PRIEHYGCLVDLYSRAGRLEDALKLVQSMP---MKPNEVVIGSLL 382
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 127/298 (42%), Gaps = 65/298 (21%)
Query: 115 TVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLV 174
TV++ + I+ + G + +A + M EP+ IT+ LL G G E L
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSG---CGDFTSGSEALG 92
Query: 175 EMEGNGFLPGGFSRIVFDDDSACSN----GNGSLRANV-AARI--------DERTYSALL 221
++ L G ++ D + G S R AR+ + T++ ++
Sbjct: 93 DL-----LHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMI 147
Query: 222 NGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLK 281
+G+ R G+++ A ++ K+ E + IS+ ++N + +GY E+A+ +M+ G+K
Sbjct: 148 DGYMRSGQVDNAAKMFDKMPERDL----ISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
Query: 282 PSYVTF-----------------------------------NTLINKFCETGEVDQAERW 306
P YV N+LI+ +C G V+ A +
Sbjct: 204 PDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQV 263
Query: 307 VKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISY-GSLINC 363
M ++ T+ ++NS+I G+ N + ++++KG KP+ +++ G+L C
Sbjct: 264 FYNMEKR----TVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTAC 317
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 109/265 (41%), Gaps = 20/265 (7%)
Query: 27 EKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLV 86
E+ L F +M SG++PD V+ A+ A L L G + + + +V V N +
Sbjct: 188 EEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSL 247
Query: 87 LGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNA 146
+ C+ V+ AR++F M R + V++N++I G+ G ++ +M+
Sbjct: 248 IDLYCRCGCVEFARQVFYNMEKRTV----VSWNSVIVGFAANGNAHESLVYFRKMQEKGF 303
Query: 147 EPSVITYNCLLGGLCSSGRVNDAREVLVEM----------EGNGFLPGGFSRIVFDDDSA 196
+P +T+ L G V + M E G L +SR +D+
Sbjct: 304 KPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDAL 363
Query: 197 CSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILV 256
L ++ + +E +LL G E L K + + V S +Y IL
Sbjct: 364 ------KLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILS 417
Query: 257 NAYCHEGYVEKAIQTAEQMEERGLK 281
N Y +G E A + +M+ GLK
Sbjct: 418 NMYAADGKWEGASKMRRKMKGLGLK 442
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 118/282 (41%), Gaps = 36/282 (12%)
Query: 110 NLVPNTV-------TYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCS 162
N VP T+ YN+L+ C V A++L RM +P TY L+ G CS
Sbjct: 170 NGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCS 229
Query: 163 SGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLN 222
+G++ +A+E L EM GF P R L+
Sbjct: 230 AGKMKEAQEFLDEMSRRGFNPPARGR-----------------------------DLLIE 260
Query: 223 GFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKP 282
G G +E AKE+++K+ + G VP ++NIL+ A G VE I+ + GL
Sbjct: 261 GLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCV 320
Query: 283 SYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEIL 342
T+ TLI + G++D+A R + +E G P Y +I G R F F
Sbjct: 321 DIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFF 380
Query: 343 EEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+++ K PN Y LI + K +DA L +M G
Sbjct: 381 SDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMG 422
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 118/289 (40%), Gaps = 29/289 (10%)
Query: 40 GIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDA 99
G + V Y + A +K + L+ M ++ + P Y +++ G C ++K+A
Sbjct: 177 GCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEA 236
Query: 100 RKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGG 159
++ DEM R P + LI+G G +E A + ++M P + T+N L+
Sbjct: 237 QEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEA 296
Query: 160 LCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSA 219
+ SG V E +EM +AC G +D TY
Sbjct: 297 ISKSGEV----EFCIEMYY----------------TACKLG---------LCVDIDTYKT 327
Query: 220 LLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERG 279
L+ ++G+I++A +L VE+G P Y ++ C G + A M+ +
Sbjct: 328 LIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKA 387
Query: 280 LKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLING 328
P+ + LI G+ A ++ +M E G+ P ++ + +G
Sbjct: 388 HPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDG 436
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 111/301 (36%), Gaps = 29/301 (9%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G +V N L L K F A+ M+ G++PD +Y V + +
Sbjct: 177 GCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEA 236
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
E + M + P +L++ GL ++ A+++ +M VP+ T+N LI+
Sbjct: 237 QEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEA 296
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
K GE+E + + TY L+ + G++++A +L +G P
Sbjct: 297 ISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKP- 355
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
F + Y+ ++ G CR G + A + +
Sbjct: 356 -FPSL---------------------------YAPIIKGMCRNGMFDDAFSFFSDMKVKA 387
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
P++ Y +L+ G A +M E GL P F+ + + G+ D A
Sbjct: 388 HPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAM 447
Query: 305 R 305
R
Sbjct: 448 R 448
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 78/183 (42%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + G P R + L E L+ + E + + M + G PD+ ++ +EA +
Sbjct: 243 MSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGE 302
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
++ E+ K + + Y ++ + K+ ++ +A +L + + P Y
Sbjct: 303 VEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAP 362
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+I G C+ G + AFS + MK P+ Y L+ G+ DA LVEM G
Sbjct: 363 IIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMG 422
Query: 181 FLP 183
+P
Sbjct: 423 LVP 425
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 74/172 (43%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K G +P +++ N L E + S + E + ++ + G+ D+ +Y + A +
Sbjct: 278 MTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGK 337
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D+ F L+ ++ P +Y ++ G+C+ DA F +M + PN Y
Sbjct: 338 IDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTM 397
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREV 172
LI + G+ A + M P ++ + GL + G+ + A +
Sbjct: 398 LITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRI 449
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 160/355 (45%), Gaps = 34/355 (9%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
MR D L ++ +V ++ G+ ++E+ + +F + E G+ + S ++ K
Sbjct: 147 MRGDK-LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKR 205
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+++ ++ + K + P+ +N+ + G CK RV++A EM P ++Y T
Sbjct: 206 VEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTT 264
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+I YC+ E K + + + M+A + P+ ITY ++ L + +A V M+ +G
Sbjct: 265 IIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSG 324
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVL-AK 239
P D Y+ L++ R GR+E+A+ V +
Sbjct: 325 CKP-----------------------------DSLFYNCLIHTLARAGRLEEAERVFRVE 355
Query: 240 LVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGL-KPSYVTFNTLINKFCETG 298
+ E GV + +YN ++ YCH +KAI+ ++ME L P T+ L+ + G
Sbjct: 356 MPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRG 415
Query: 299 EVDQAERWVKKMLEK-GIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKP 352
+V + + +K+M+ K ++ TY LI R + + + EE+ + + P
Sbjct: 416 DVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITP 470
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 152/321 (47%), Gaps = 34/321 (10%)
Query: 83 YNLVLGGLCKVRRVKDARKLFDEMLHRNLVP-NTVTYNTLIDGYCKVGEMEKAFSLKARM 141
Y++ + L K ++ ++ + M LV NTV ++ + GE E+A + R+
Sbjct: 124 YDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVA--KIMRRFAGAGEWEEAVGIFDRL 181
Query: 142 KAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGN 201
E + + N LL LC RV AR VL++++ + P + +F +
Sbjct: 182 GEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNIF--------IH 232
Query: 202 GSLRANVAARIDER-----------------TYSALLNGFCRVGRIEKAKEVLAKLVENG 244
G +AN R++E +Y+ ++ +C+ K E+L+++ NG
Sbjct: 233 GWCKAN---RVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANG 289
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
P+ I+Y ++++ + E+A++ A +M+ G KP + +N LI+ G +++AE
Sbjct: 290 SPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAE 349
Query: 305 RWVK-KMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGM-KPNVISYGSLIN 362
R + +M E G++ TYNS+I Y K E+L+E+E + P+V +Y L+
Sbjct: 350 RVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLR 409
Query: 363 CLCKDRKLLDAEIVLGDMASR 383
K +++ +L +M ++
Sbjct: 410 SCFKRGDVVEVGKLLKEMVTK 430
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
Query: 216 TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQM 275
T + ++ F G E+A + +L E G+ + S N+L++ C E VE+A Q+
Sbjct: 157 TVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL 216
Query: 276 EERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNF 335
+ + P+ TFN I+ +C+ V++A +++M G P + +Y ++I Y + F
Sbjct: 217 KSH-ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEF 275
Query: 336 VKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+K +E+L E+E G PN I+Y ++++ L ++ +A V M G
Sbjct: 276 IKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSG 324
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 130/310 (41%), Gaps = 10/310 (3%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G+ + S+N L +TL K+ E+ V + +S I P+ ++ + +++
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEA 243
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
+ M+ P V Y ++ C+ ++ EM PN++TY T++
Sbjct: 244 LWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS 303
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVL-VEME--GNGF 181
E E+A + RMK +P + YNCL+ L +GR+ +A V VEM G
Sbjct: 304 LNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSI 363
Query: 182 LPGGFSRIV-----FDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEV 236
++ ++ D++ + ++ D TY LL + G + + ++
Sbjct: 364 NTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKL 423
Query: 237 LAKLV-ENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFC 295
L ++V ++ + + +Y L+ C E A E+M + + P + T L+ +
Sbjct: 424 LKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVK 483
Query: 296 ETGEVDQAER 305
+ + AER
Sbjct: 484 KKNMHESAER 493
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 160/355 (45%), Gaps = 34/355 (9%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
MR D L ++ +V ++ G+ ++E+ + +F + E G+ + S ++ K
Sbjct: 147 MRGDK-LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKR 205
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+++ ++ + K + P+ +N+ + G CK RV++A EM P ++Y T
Sbjct: 206 VEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTT 264
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+I YC+ E K + + + M+A + P+ ITY ++ L + +A V M+ +G
Sbjct: 265 IIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSG 324
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVL-AK 239
P D Y+ L++ R GR+E+A+ V +
Sbjct: 325 CKP-----------------------------DSLFYNCLIHTLARAGRLEEAERVFRVE 355
Query: 240 LVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGL-KPSYVTFNTLINKFCETG 298
+ E GV + +YN ++ YCH +KAI+ ++ME L P T+ L+ + G
Sbjct: 356 MPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRG 415
Query: 299 EVDQAERWVKKMLEK-GIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKP 352
+V + + +K+M+ K ++ TY LI R + + + EE+ + + P
Sbjct: 416 DVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITP 470
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 152/321 (47%), Gaps = 34/321 (10%)
Query: 83 YNLVLGGLCKVRRVKDARKLFDEMLHRNLVP-NTVTYNTLIDGYCKVGEMEKAFSLKARM 141
Y++ + L K ++ ++ + M LV NTV ++ + GE E+A + R+
Sbjct: 124 YDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVA--KIMRRFAGAGEWEEAVGIFDRL 181
Query: 142 KAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGN 201
E + + N LL LC RV AR VL++++ + P + +F +
Sbjct: 182 GEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNIF--------IH 232
Query: 202 GSLRANVAARIDER-----------------TYSALLNGFCRVGRIEKAKEVLAKLVENG 244
G +AN R++E +Y+ ++ +C+ K E+L+++ NG
Sbjct: 233 GWCKAN---RVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANG 289
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
P+ I+Y ++++ + E+A++ A +M+ G KP + +N LI+ G +++AE
Sbjct: 290 SPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAE 349
Query: 305 RWVK-KMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGM-KPNVISYGSLIN 362
R + +M E G++ TYNS+I Y K E+L+E+E + P+V +Y L+
Sbjct: 350 RVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLR 409
Query: 363 CLCKDRKLLDAEIVLGDMASR 383
K +++ +L +M ++
Sbjct: 410 SCFKRGDVVEVGKLLKEMVTK 430
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
Query: 216 TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQM 275
T + ++ F G E+A + +L E G+ + S N+L++ C E VE+A Q+
Sbjct: 157 TVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL 216
Query: 276 EERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNF 335
+ + P+ TFN I+ +C+ V++A +++M G P + +Y ++I Y + F
Sbjct: 217 KSH-ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEF 275
Query: 336 VKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+K +E+L E+E G PN I+Y ++++ L ++ +A V M G
Sbjct: 276 IKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSG 324
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 130/310 (41%), Gaps = 10/310 (3%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G+ + S+N L +TL K+ E+ V + +S I P+ ++ + +++
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEA 243
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
+ M+ P V Y ++ C+ ++ EM PN++TY T++
Sbjct: 244 LWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS 303
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVL-VEME--GNGF 181
E E+A + RMK +P + YNCL+ L +GR+ +A V VEM G
Sbjct: 304 LNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSI 363
Query: 182 LPGGFSRIV-----FDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEV 236
++ ++ D++ + ++ D TY LL + G + + ++
Sbjct: 364 NTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKL 423
Query: 237 LAKLV-ENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFC 295
L ++V ++ + + +Y L+ C E A E+M + + P + T L+ +
Sbjct: 424 LKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVK 483
Query: 296 ETGEVDQAER 305
+ + AER
Sbjct: 484 KKNMHESAER 493
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 172/370 (46%), Gaps = 19/370 (5%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M KDGVLP ++ + E + + +++ G+ + + +
Sbjct: 172 MMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGE 231
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
LD + M +ER V +N VL C+ + ++A +L EM + P VT+N
Sbjct: 232 LDFATKFFRRM-RER---DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNI 287
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI GY ++G+ + A L +M+ V T+ ++ GL +G A ++ +M G
Sbjct: 288 LIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAG 347
Query: 181 FLPGGFSRIVFDDDSACSN----GNGSLRANVAARI----DERTYSALLNGFCRVGRIEK 232
+P + + SACS GS ++A ++ D ++L++ + + G++E
Sbjct: 348 VVPNAVT--IMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLED 405
Query: 233 AKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLIN 292
A++V + V ++N ++ YC GY KA + +M++ L+P+ +T+NT+I+
Sbjct: 406 ARKVFDSVKNKDVY----TWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMIS 461
Query: 293 KFCETGEVDQAERWVKKMLEKG-IAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMK 351
+ + G+ +A ++M + G + T+N +I GY + + E+ +++
Sbjct: 462 GYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFM 521
Query: 352 PNVISYGSLI 361
PN ++ SL+
Sbjct: 522 PNSVTILSLL 531
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 168/362 (46%), Gaps = 38/362 (10%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G+ V + + L+ + + L +F M +G+ P+ V+ AV A LK
Sbjct: 308 METFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKV 367
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+++G E+ K V V N ++ K +++DARK+FD + ++++ T+N+
Sbjct: 368 INQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVY----TWNS 423
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+I GYC+ G KA+ L RM+ N P++IT+N ++ G +G +A ++ ME +G
Sbjct: 424 MITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDG 483
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
++ N A T++ ++ G+ + G+ ++A E+ K+
Sbjct: 484 ----------------------KVQRNTA------TWNLIIAGYIQNGKKDEALELFRKM 515
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQ-MEERGLKPSYVTFNTLINKFCETGE 299
+ +P+ ++ L+ A C K ++ + R L + N L + + ++G+
Sbjct: 516 QFSRFMPNSVTILSLLPA-CANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGD 574
Query: 300 VDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGS 359
++ + M K I T+NSLI GY ++ + +++ +G+ PN + S
Sbjct: 575 IEYSRTIFLGMETKDII----TWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSS 630
Query: 360 LI 361
+I
Sbjct: 631 II 632
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 165/367 (44%), Gaps = 42/367 (11%)
Query: 6 VLPSVRSVNRL-FETLVGS----KQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
V S+R N + ++G+ ++ +V +F M++ G+ PD + K ++ D
Sbjct: 137 VFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGD 196
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
++ G + + K + + V N +L K + A K F M R+++ +N+
Sbjct: 197 VEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVI----AWNS 252
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
++ YC+ G+ E+A L M+ P ++T+N L+GG G+ + A +++ +ME G
Sbjct: 253 VLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFG 312
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
F T++A+++G G +A ++ K+
Sbjct: 313 ITADVF-----------------------------TWTAMISGLIHNGMRYQALDMFRKM 343
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
GVVP+ ++ V+A + + + + G + N+L++ + + G++
Sbjct: 344 FLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKL 403
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
+ A +K+ + + T+NS+I GY + K +E+ ++ ++PN+I++ ++
Sbjct: 404 EDA----RKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTM 459
Query: 361 INCLCKD 367
I+ K+
Sbjct: 460 ISGYIKN 466
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 152/358 (42%), Gaps = 23/358 (6%)
Query: 36 MVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVG----PSVFVYNLVLGGLC 91
+ + G + +Y K +E+ + D G +G + R G P VFV +L
Sbjct: 72 LFQQGSKVKRSTYLKLLESCI-----DSGSIHLGRILHARFGLFTEPDVFVETKLLSMYA 126
Query: 92 KVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVI 151
K + DARK+FD M RNL T++ +I Y + + L M P
Sbjct: 127 KCGCIADARKVFDSMRERNLF----TWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDF 182
Query: 152 TYNCLLGGLCSSGRVNDAR---EVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANV 208
+ +L G + G V + V++++ + L S + + C G
Sbjct: 183 LFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLR--VSNSILAVYAKC--GELDFATKF 238
Query: 209 AARIDER---TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYV 265
R+ ER ++++L +C+ G+ E+A E++ ++ + G+ P +++NIL+ Y G
Sbjct: 239 FRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKC 298
Query: 266 EKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSL 325
+ A+ ++ME G+ T+ +I+ G QA +KM G+ P T S
Sbjct: 299 DAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSA 358
Query: 326 INGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
++ + + E+ K G +V+ SL++ K KL DA V + ++
Sbjct: 359 VSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK 416
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 143/311 (45%), Gaps = 37/311 (11%)
Query: 55 AVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLV-- 112
A M + + FE + M++ + + YN+ + G + A LF EM R+ V
Sbjct: 225 ADMRSEFKRVFEKLKGMKRFKF--DTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYG 282
Query: 113 ----PNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVND 168
P+ TYN+LI C G+ + A + +K EP TY L+ G C S R++D
Sbjct: 283 SSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDD 342
Query: 169 AREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVG 228
A + EM+ NGF+P D Y+ LL+G +
Sbjct: 343 AMRIYGEMQYNGFVP-----------------------------DTIVYNCLLDGTLKAR 373
Query: 229 RIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFN 288
++ +A ++ K+V+ GV S +YNIL++ G E ++++G +TF+
Sbjct: 374 KVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFS 433
Query: 289 TLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKK 348
+ + C G+++ A + V++M +G + L T +SL+ G+ + + ++++ I +
Sbjct: 434 IVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREG 493
Query: 349 GMKPNVISYGS 359
+ PNV+ + +
Sbjct: 494 NLVPNVLRWNA 504
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 174/417 (41%), Gaps = 34/417 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+ +G +P N L + + +++ + +F MV+ G+R +Y ++
Sbjct: 350 MQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGR 409
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ GF L ++K+ +++V LC+ +++ A KL +EM R + VT ++
Sbjct: 410 AEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISS 469
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L+ G+ K G + L ++ N P+V+ +N + + D ++ G
Sbjct: 470 LLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKD-KDYTPMFPSKG 528
Query: 181 FLPGGFSRIVFDDDSACS-------NGNGSLRANVAARIDERTYSALLNGFCRVGRIEKA 233
S + +DD A + + S + +R L G R R+E
Sbjct: 529 SFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPLFGLARGQRVEAK 588
Query: 234 KE---------------------VLAKLVE--NGVVPSQIS---YNILVNAYCHEGYVEK 267
+ + KL E NG+ + ++ YN +++++ +GY +
Sbjct: 589 PDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQT 648
Query: 268 AIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLIN 327
A +QM E T+N +I + G D A + ++ ++G + YN+LIN
Sbjct: 649 ARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLIN 708
Query: 328 GYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
G+ + + ++ + ++ G+ P+V+SY ++I K KL +A L M G
Sbjct: 709 ALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAG 765
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 111/251 (44%), Gaps = 29/251 (11%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P + + N L L + + L V+ ++ SG PD +Y ++ +D +
Sbjct: 287 PDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRI 346
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
G M+ P VYN +L G K R+V +A +LF++M+ + + TYN LIDG +
Sbjct: 347 YGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFR 406
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
G E F+L +K IT++ + LC G++ A +++ EME GF
Sbjct: 407 NGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGF------ 460
Query: 188 RIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVP 247
+D T S+LL GF + GR + ++++ + E +VP
Sbjct: 461 -----------------------SVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVP 497
Query: 248 SQISYNILVNA 258
+ + +N V A
Sbjct: 498 NVLRWNAGVEA 508
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 157/354 (44%), Gaps = 42/354 (11%)
Query: 66 ELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGY 125
+L+G M+++ V + ++L L + + + A + D M N Y++++
Sbjct: 113 DLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIAL 172
Query: 126 CKVGEMEKAFSL---------------KARMKAPNAEPSVITYNCLLGGLCSSGRVNDAR 170
K E+ A S+ R+ + P + N LL GL + ++ +
Sbjct: 173 VKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFK 232
Query: 171 EVLVEMEGNGFLPGGFSRIVFDDDS--ACSNG---NGSLRANVA--ARIDER-------- 215
V +++G R FD S C +G G L A ++ + ER
Sbjct: 233 RVFEKLKG-------MKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSF 285
Query: 216 -----TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQ 270
TY++L++ C G+ + A V +L +G P +Y IL+ C ++ A++
Sbjct: 286 GPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMR 345
Query: 271 TAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYG 330
+M+ G P + +N L++ + +V +A + +KM+++G+ + TYN LI+G
Sbjct: 346 IYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLF 405
Query: 331 RISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
R F + +++KKG + I++ + LC++ KL A ++ +M +RG
Sbjct: 406 RNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRG 459
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 103/235 (43%), Gaps = 46/235 (19%)
Query: 87 LGGLCKVRRVKDARKLFD-EMLHRNLVPNTVTYNTLIDGYCKVGEME---KAFSLKARMK 142
L GL + +RV+ FD +M+ NT + Y G++ K F + M
Sbjct: 576 LFGLARGQRVEAKPDSFDVDMM-----------NTFLSIYLSKGDLSLACKLFEIFNGMG 624
Query: 143 APNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNG 202
+ + TYN ++ G AR VL +M N C+
Sbjct: 625 VTDL--TSYTYNSMMSSFVKKGYFQTARGVLDQMFEN----------------FCA---- 662
Query: 203 SLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHE 262
A++A TY+ ++ G ++GR + A VL +L + G + YN L+NA
Sbjct: 663 ---ADIA------TYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKA 713
Query: 263 GYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAP 317
+++A Q + M+ G+ P V++NT+I + G++ +A +++K ML+ G P
Sbjct: 714 TRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLP 768
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 70/141 (49%)
Query: 216 TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQM 275
TY+++++ F + G + A+ VL ++ EN +YN+++ G + A +++
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 276 EERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNF 335
++G V +NTLIN + +D+A + M GI P + +YN++I +
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 336 VKCFEILEEIEKKGMKPNVIS 356
+ ++ L+ + G PN ++
Sbjct: 752 KEAYKYLKAMLDAGCLPNHVT 772
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 74/173 (42%), Gaps = 29/173 (16%)
Query: 114 NTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVL 173
+ TYN+++ + K G + A + +M + TYN ++ GL GR + A VL
Sbjct: 629 TSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVL 688
Query: 174 VEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKA 233
+ G G+ IV Y+ L+N + R+++A
Sbjct: 689 DRLTKQG----GYLDIVM-------------------------YNTLINALGKATRLDEA 719
Query: 234 KEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVT 286
++ + NG+ P +SYN ++ G +++A + + M + G P++VT
Sbjct: 720 TQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT 772
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 75/178 (42%), Gaps = 15/178 (8%)
Query: 15 RLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKE 74
+LFE G + + M+ S ++ + V LD+ FE
Sbjct: 615 KLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGV--------LDQMFE-------N 659
Query: 75 RVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKA 134
+ YN+++ GL K+ R A + D + + + V YNTLI+ K +++A
Sbjct: 660 FCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEA 719
Query: 135 FSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFD 192
L MK+ P V++YN ++ +G++ +A + L M G LP + + D
Sbjct: 720 TQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTILD 777
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 170/349 (48%), Gaps = 16/349 (4%)
Query: 23 SKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFV 82
S +EK + +F +M SG + + K ++ + +G ++ G + + + +V +
Sbjct: 67 SGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSM 126
Query: 83 YNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMK 142
N ++ + +++ +RK+F+ M RNL ++N+++ Y K+G ++ A L M+
Sbjct: 127 CNSLIVMYSRNGKLELSRKVFNSMKDRNLS----SWNSILSSYTKLGYVDDAIGLLDEME 182
Query: 143 APNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNG 202
+P ++T+N LL G S G DA VL M+ G P S I + G+
Sbjct: 183 ICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPST-SSISSLLQAVAEPGHL 241
Query: 203 SLRANVAARI-------DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNIL 255
L + I D + L++ + + G + A+ V + +V ++N L
Sbjct: 242 KLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIV----AWNSL 297
Query: 256 VNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGI 315
V+ + ++ A +ME+ G+KP +T+N+L + + G+ ++A + KM EKG+
Sbjct: 298 VSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGV 357
Query: 316 APTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
AP + ++ ++ +G + NF ++ +++++G+ PN + +L+ L
Sbjct: 358 APNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKIL 406
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 174/411 (42%), Gaps = 49/411 (11%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G+ P + + N L + +AV M +G++P S ++A L G
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLG 244
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLV------------ 112
+ G + + ++ V+V ++ K + AR +FD M +N+V
Sbjct: 245 KAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYA 304
Query: 113 -------------------PNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITY 153
P+ +T+N+L GY +G+ EKA + +MK P+V+++
Sbjct: 305 CLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSW 364
Query: 154 NCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGS--------LR 205
+ G +G +A +V ++M+ G P + C + S LR
Sbjct: 365 TAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLR 424
Query: 206 ANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYV 265
N+ D +AL++ + + G ++ A E+ + + S+N ++ Y G
Sbjct: 425 KNLIC--DAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLA----SWNCMLMGYAMFGRG 478
Query: 266 EKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK-GIAPTLETYNS 324
E+ I M E G++P +TF ++++ +G V + ++ M + GI PT+E +
Sbjct: 479 EEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSC 538
Query: 325 LINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEI 375
+++ GR S ++ E + I+ +KP+ +G+ ++ R L AEI
Sbjct: 539 MVDLLGR-SGYLD--EAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEI 586
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 128/270 (47%), Gaps = 36/270 (13%)
Query: 83 YNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMK 142
+N +L K+ V DA L DEM L P+ VT+N+L+ GY G + A ++ RM+
Sbjct: 158 WNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ 217
Query: 143 APNAEPSVITYNCLLGGLCSSGRVNDAREV------------------LVEME-GNGFLP 183
+PS + + LL + G + + + L++M G+LP
Sbjct: 218 IAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLP 277
Query: 184 GGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVEN 243
++R+VFD A N+ A +++L++G ++ A+ ++ ++ +
Sbjct: 278 --YARMVFDMMDA---------KNIVA------WNSLVSGLSYACLLKDAEALMIRMEKE 320
Query: 244 GVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQA 303
G+ P I++N L + Y G EKA+ +M+E+G+ P+ V++ + + + G A
Sbjct: 321 GIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNA 380
Query: 304 ERWVKKMLEKGIAPTLETYNSLINGYGRIS 333
+ KM E+G+ P T ++L+ G +S
Sbjct: 381 LKVFIKMQEEGVGPNAATMSTLLKILGCLS 410
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 4/165 (2%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K+G+ P + N L + EK L V M E G+ P+VVS+ +
Sbjct: 317 MEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGN 376
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
++ M++E VGP+ + +L L + + +++ L +NL+ +
Sbjct: 377 FRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATA 436
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGR 165
L+D Y K G+++ A + +K S+ ++NC+L G GR
Sbjct: 437 LVDMYGKSGDLQSAIEIFWGIK----NKSLASWNCMLMGYAMFGR 477
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 82/185 (44%), Gaps = 7/185 (3%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M++ GV P+V S +F + F L VF M E G+ P+ + ++ L
Sbjct: 352 MKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSL 411
Query: 61 LDKGFELMG-CMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYN 119
L G E+ G C+ K + + +V ++ K ++ A ++F + +++L ++N
Sbjct: 412 LHSGKEVHGFCLRKNLICDA-YVATALVDMYGKSGDLQSAIEIFWGIKNKSL----ASWN 466
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN 179
++ GY G E+ + + M EP IT+ +L +SG V + + M
Sbjct: 467 CMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSR 526
Query: 180 -GFLP 183
G +P
Sbjct: 527 YGIIP 531
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 141/321 (43%), Gaps = 13/321 (4%)
Query: 48 YGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEML 107
YGKA L+ L M K V +N ++ + +A L +M
Sbjct: 315 YGKA-------GRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKME 367
Query: 108 HRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVN 167
+ + P+T TYN L+ + G++E A +++ P +T+ +L LC V
Sbjct: 368 EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVA 427
Query: 168 DAREVLVEMEGNGFLPGGFSRIV----FDDDSACSNGNGSL-RANVAARIDERTYSALLN 222
+ V+ EM+ N S V + ++ R + + T +A+++
Sbjct: 428 EVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVID 487
Query: 223 GFCRVGRIEKAKEVL-AKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLK 281
+ G +A+ V K +G + YN+++ AY EKA+ + M+ +G
Sbjct: 488 VYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTW 547
Query: 282 PSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEI 341
P T+N+L VD+A+R + +ML+ G P +TY ++I Y R+ ++
Sbjct: 548 PDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDL 607
Query: 342 LEEIEKKGMKPNVISYGSLIN 362
E +EK G+KPN + YGSLIN
Sbjct: 608 YEAMEKTGVKPNEVVYGSLIN 628
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 138/307 (44%), Gaps = 17/307 (5%)
Query: 78 PSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSL 137
P+V YN+VL L + + + R + EM H ++P TY L+D Y K G +++A
Sbjct: 143 PNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLW 202
Query: 138 KARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSAC 197
M P +T ++ +SG + A G+ G + D
Sbjct: 203 IKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFF-----KGWCAGKVDLDLDSIDDFP 257
Query: 198 SNGNGSLRANVAARIDERTYSALLNGFCRVGR---IEKAKEVLAKLVENGVVPSQIS-YN 253
NG+ N+ + + +VG IEK+ + + P S +N
Sbjct: 258 KNGSAQSPVNLKQFLSMELF--------KVGARNPIEKSLHFASGSDSSPRKPRLTSTFN 309
Query: 254 ILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK 313
L++ Y G + A +M + G+ VTFNT+I+ G + +AE +KKM EK
Sbjct: 310 TLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEK 369
Query: 314 GIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDA 373
GI+P +TYN L++ + + E +I K G+ P+ +++ ++++ LC+ + + +
Sbjct: 370 GISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEV 429
Query: 374 EIVLGDM 380
E V+ +M
Sbjct: 430 EAVIAEM 436
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 170/403 (42%), Gaps = 32/403 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K GV + N + T + ++ M E GI PD +Y + D
Sbjct: 331 MLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGD 390
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
++ E + K + P + VL LC+ + V + + EM ++ + +
Sbjct: 391 IEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPV 450
Query: 121 LIDGYCKVGEMEKA------FSLKARMKAPNAEPSVITY----------NCLLGGLCSSG 164
++ Y G + +A F L + + + Y G SG
Sbjct: 451 IMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSG 510
Query: 165 RVNDARE--VLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLN 222
+ ND E V+++ G L + A S G N DE TY++L
Sbjct: 511 QRNDVLEYNVMIKAYGKAKL----------HEKALSLFKG--MKNQGTWPDECTYNSLFQ 558
Query: 223 GFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKP 282
V +++A+ +LA+++++G P +Y ++ +Y G + A+ E ME+ G+KP
Sbjct: 559 MLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKP 618
Query: 283 SYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEIL 342
+ V + +LIN F E+G V++A ++ + M E G+ SLI Y ++ + +
Sbjct: 619 NEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVY 678
Query: 343 EEIEKKGMKPNVISYGSLINCLCKDRKLL-DAEIVLGDMASRG 384
++++ P+V + S+++ LC D ++ +AE + + +G
Sbjct: 679 DKMKDSEGGPDVAASNSMLS-LCADLGIVSEAESIFNALREKG 720
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 151/381 (39%), Gaps = 61/381 (16%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+ G P + N LF+ L G ++ + +M++SG +P +Y + + V L
Sbjct: 541 MKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGL 600
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L +L MEK V P+ VY ++ G + V++A + F M + N + +
Sbjct: 601 LSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTS 660
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSS----------------- 163
LI Y KVG +E+A + +MK P V N +L LC+
Sbjct: 661 LIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLS-LCADLGIVSEAESIFNALREK 719
Query: 164 ------------------GRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLR 205
G +++A EV EM +G L S F+ AC +G L
Sbjct: 720 GTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTS---FNQVMACYAADGQLS 776
Query: 206 ANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPS------QISYN------ 253
+ LL + + L L++ G VPS Q +YN
Sbjct: 777 ECCELFHEMLVERKLLLDWGTF-------KTLFTLLKKGGVPSEAVSQLQTAYNEAKPLA 829
Query: 254 ---ILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKM 310
I + G A+++ +++ + + +N +I + +G++D A + +M
Sbjct: 830 TPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRM 889
Query: 311 LEKGIAPTLETYNSLINGYGR 331
EKG+ P + T L+ YG+
Sbjct: 890 QEKGLEPDIVTQAYLVGIYGK 910
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 128/307 (41%), Gaps = 30/307 (9%)
Query: 39 SGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKD 98
SG R DV+ Y ++A K +K L M+ + P YN + L V V +
Sbjct: 509 SGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDE 568
Query: 99 ARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLG 158
A+++ EML P TY +I Y ++G + A L M+ +P+ + Y L+
Sbjct: 569 AQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLIN 628
Query: 159 GLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYS 218
G SG V +A + ME +G + + +
Sbjct: 629 GFAESGMVEEAIQYFRMMEEHG-----------------------------VQSNHIVLT 659
Query: 219 ALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEER 278
+L+ + +VG +E+A+ V K+ ++ P + N +++ G V +A + E+
Sbjct: 660 SLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREK 719
Query: 279 GLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKC 338
G ++F T++ + G +D+A ++M E G+ ++N ++ Y +C
Sbjct: 720 G-TCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSEC 778
Query: 339 FEILEEI 345
E+ E+
Sbjct: 779 CELFHEM 785
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 176/379 (46%), Gaps = 28/379 (7%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVE------- 53
M +G+ + N +F+ + KV V MV I V SY + V
Sbjct: 829 MLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQ 888
Query: 54 --AAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNL 111
+A+ LK+ F L+G E V +YN+++ + + + + K+ EM R +
Sbjct: 889 SLSAISLKE----FLLLG----ESNPGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGV 940
Query: 112 VPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDARE 171
+P+ T+N L+ GY + + + M + +P+ + + LC +G V A +
Sbjct: 941 LPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALD 1000
Query: 172 VLVEMEGNGFLPGGF---SRIVFDDDSACSNGNGSLRANVAARIDER-----TYSALLNG 223
+ ME G+ G ++IV ++ S G + R+ Y ++
Sbjct: 1001 LWQVMESKGWNLGSSVVQTKIV---ETLISKGEIPKAEDFLTRVTRNGMMAPNYDNIIKK 1057
Query: 224 FCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPS 283
G ++ A +L +++N +P SY+ ++N ++KA+ +M E GL PS
Sbjct: 1058 LSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPS 1117
Query: 284 YVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILE 343
T++ L++KFCE +V ++ER +K M+ G +P+ E + ++I+ + N VK E++E
Sbjct: 1118 ISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKNTVKASEMME 1177
Query: 344 EIEKKGMKPNVISYGSLIN 362
++K G + + ++ SLI+
Sbjct: 1178 MMQKCGYEVDFETHWSLIS 1196
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/412 (21%), Positives = 164/412 (39%), Gaps = 69/412 (16%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGI---RPDVVSYGKAVEAAVM 57
MR+ G++P L + LV + E + D VE+ ++ S GK +E +
Sbjct: 209 MRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGKVIELLCL 268
Query: 58 LKDLDKGFEL------MGCM--------------EKE------------RVGPSVFVYNL 85
+ + + L +GC+ EK+ + P VFV N
Sbjct: 269 DQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEVKYEPDVFVGNR 328
Query: 86 VLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPN 145
+L LC+ + A +E+ H + VT+ LI C G++++A + + +
Sbjct: 329 ILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKG 388
Query: 146 AEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLR 205
+P V +YN +L GL G +L EM+ NG +
Sbjct: 389 YKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMM----------------------- 425
Query: 206 ANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYV 265
+ T+ ++ G+C+ + E+AK ++ K+ G++ + + L A+ G+
Sbjct: 426 ------LSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFD 479
Query: 266 EKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSL 325
A++ + K + F+ L N ++D E+ V +L++ + P +NSL
Sbjct: 480 PLAVRLKRDNDSTFSKAEF--FDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPE---FNSL 534
Query: 326 INGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVL 377
I + +L+E+ + G K + S+ L+ LC R L I L
Sbjct: 535 IVRASEDGDLQTALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISL 586
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 139/341 (40%), Gaps = 70/341 (20%)
Query: 82 VYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARM 141
+YN++ G CK ++ M+ +N++ + +Y + C + A SLK +
Sbjct: 840 IYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFL 899
Query: 142 KAPNAEPS-VITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNG 200
+ P VI YN L+ + + + +VL+EM+G G LP
Sbjct: 900 LLGESNPGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLP----------------- 942
Query: 201 NGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYC 260
DE T++ L++G+ + L+ ++ G+ P+ S + ++ C
Sbjct: 943 ------------DETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLC 990
Query: 261 HEGYVEKAIQTAEQMEERG-------------------------------------LKPS 283
G V+KA+ + ME +G + P+
Sbjct: 991 DNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPN 1050
Query: 284 YVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILE 343
Y + +I K + G +D A + ML+ P +Y+S+ING R + K +
Sbjct: 1051 Y---DNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHT 1107
Query: 344 EIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
E+ + G+ P++ ++ L++ C+ ++L++E ++ M G
Sbjct: 1108 EMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLG 1148
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 140/320 (43%), Gaps = 38/320 (11%)
Query: 71 MEKERVGPSVFVYNLVLGGLCKVRRVKDARK---LFDEMLHRNLVPNTVTYNTLIDGYCK 127
ME ER G ++ + + K D+RK LFD M + LVP T Y LID +
Sbjct: 171 MEMERHGDTMVNEGIFCDLIGKYVDDFDSRKAVMLFDWMRRKGLVPLTSCYQILIDQLVR 230
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCL---LGGLCSSGRVNDAREVLVEMEGNGFLPG 184
V E A+ + AE + + + + + LC +V +AR + ++ G +
Sbjct: 231 VHRTESAYRICLDWVETRAELNHMNIDSIGKVIELLCLDQKVQEARVLARKLVALGCIL- 289
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
N S+ + + +E+ + +++L+ + E
Sbjct: 290 ----------------NSSIYSKITIGYNEK---------------QDFEDLLSFIGEVK 318
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
P N ++++ C E+A E++E G K VTF LI C G++ +A
Sbjct: 319 YEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAV 378
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
++ +++ KG P + +YN++++G R + IL+E+++ GM ++ ++ ++
Sbjct: 379 LYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGY 438
Query: 365 CKDRKLLDAEIVLGDMASRG 384
CK R+ +A+ ++ M G
Sbjct: 439 CKARQFEEAKRIVNKMFGYG 458
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 121/293 (41%), Gaps = 39/293 (13%)
Query: 28 KVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNL-- 85
K + +F M G+ P Y ++ V + + + + C++ + N+
Sbjct: 201 KAVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRI--CLDWVETRAELNHMNIDS 258
Query: 86 ---VLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMK 142
V+ LC ++V++AR L +++ + N+ Y+ + GY + + E S +K
Sbjct: 259 IGKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEVK 318
Query: 143 APNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNG 202
EP V N +L LC A + E+E GF
Sbjct: 319 Y---EPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGF--------------------- 354
Query: 203 SLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHE 262
+ DE T+ L+ C G I++A L++++ G P SYN +++ +
Sbjct: 355 --------KQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRK 406
Query: 263 GYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGI 315
G + ++M+E G+ S TF ++ +C+ + ++A+R V KM G+
Sbjct: 407 GLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYGL 459
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 131/302 (43%), Gaps = 24/302 (7%)
Query: 84 NLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKA 143
N ++ CK + ++ +F +M+ + + VTY +LI +CK + ++ +
Sbjct: 603 NFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQN 662
Query: 144 PNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS-----RIVFDDDSACS 198
N P + L L G V E +V++ F+ S RI + +
Sbjct: 663 DNWLPDLNDCGDLWNCLVRKGLV----EEVVQLFERVFISYPLSQSEACRIFVEKLTVL- 717
Query: 199 NGNGSLRANVAAR-------IDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQIS 251
G + +V R +++ Y+ L+ G C + A +L ++++ +PS S
Sbjct: 718 -GFSCIAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGS 776
Query: 252 YNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKML 311
+L+ C A AEQ++ SYV + LI G++ AE ++ ML
Sbjct: 777 CLMLIPRLCRANKAGTAFNLAEQID-----SSYVHY-ALIKGLSLAGKMLDAENQLRIML 830
Query: 312 EKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLL 371
G++ + YN + GY + +N++K E+L + +K + +V SY + +C + + L
Sbjct: 831 SNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSL 890
Query: 372 DA 373
A
Sbjct: 891 SA 892
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 163/347 (46%), Gaps = 44/347 (12%)
Query: 12 SVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCM 71
S N + + LV + ++ + +F M R DVVS+ V+ +D+ L CM
Sbjct: 173 SWNSMVKALVQRGRIDEAMNLFERMP----RRDVVSWTAMVDGLAKNGKVDEARRLFDCM 228
Query: 72 EKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEM 131
+ ++ +N ++ G + R+ +A +LF M R+ ++NT+I G+ + EM
Sbjct: 229 PER----NIISWNAMITGYAQNNRIDEADQLFQVMPERDFA----SWNTMITGFIRNREM 280
Query: 132 EKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP---GGFSR 188
KA L RM E +VI++ ++ G + +A V +M +G + G +
Sbjct: 281 NKACGLFDRM----PEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVS 336
Query: 189 IVFDDDSACSNGNG--------SLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
I+ SACS+ G L + + +E SALLN + + G + A+ K+
Sbjct: 337 IL----SACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAAR----KM 388
Query: 241 VENGVVPSQ--ISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETG 298
+NG+V + IS+N ++ Y H G+ ++AI+ QM + G KPS VT+ L+ G
Sbjct: 389 FDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAG 448
Query: 299 EVDQAERWVKKMLEKGIAPTL-ETYNSLINGYGR------ISNFVKC 338
V++ + K ++ P E Y L++ GR ++NF+ C
Sbjct: 449 LVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINC 495
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 146/309 (47%), Gaps = 62/309 (20%)
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
F L+ + P V ++G LCKV ++ +ARKLFD + R++ VT+ +I G
Sbjct: 31 FNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDV----VTWTHVITG 86
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
Y K+G+M +A L R+ ++ +V+T+ ++ G S +++ A + EM +
Sbjct: 87 YIKLGDMREARELFDRV---DSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVV-- 141
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
+++ +++G+ + GRI+KA E+ ++ E
Sbjct: 142 -------------------------------SWNTMIDGYAQSGRIDKALELFDEMPERN 170
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
+V S+N +V A G +++A+ E+M R + V++ +++ + G+VD+A
Sbjct: 171 IV----SWNSMVKALVQRGRIDEAMNLFERMPRRDV----VSWTAMVDGLAKNGKVDEAR 222
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYG---RISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
R M E+ I ++N++I GY RI + F+++ E + S+ ++I
Sbjct: 223 RLFDCMPERNII----SWNAMITGYAQNNRIDEADQLFQVMPE-------RDFASWNTMI 271
Query: 362 NCLCKDRKL 370
++R++
Sbjct: 272 TGFIRNREM 280
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 164/348 (47%), Gaps = 37/348 (10%)
Query: 23 SKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFV 82
SKQ +F +M E +VVS+ ++ +DK EL M + ++
Sbjct: 122 SKQLSIAEMLFQEMPER----NVVSWNTMIDGYAQSGRIDKALELFDEMPER----NIVS 173
Query: 83 YNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMK 142
+N ++ L + R+ +A LF+ M R++V ++ ++DG K G++++A L M
Sbjct: 174 WNSMVKALVQRGRIDEAMNLFERMPRRDVV----SWTAMVDGLAKNGKVDEARRLFDCM- 228
Query: 143 APNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGF-----LPGGFSRIVFDDDSAC 197
E ++I++N ++ G + R+++A ++ M F + GF R + + AC
Sbjct: 229 ---PERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIR-NREMNKAC 284
Query: 198 SNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVN 257
+ NV +++ ++ G+ E+A V +K++ +G V + + +
Sbjct: 285 GLFDRMPEKNVI------SWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSIL 338
Query: 258 AYCHE--GYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGI 315
+ C + G VE Q + + + + + + + L+N + ++GE+ A +KM + G+
Sbjct: 339 SACSDLAGLVE-GQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAA----RKMFDNGL 393
Query: 316 A--PTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
L ++NS+I Y + + E+ ++ K G KP+ ++Y +L+
Sbjct: 394 VCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLL 441
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 122/268 (45%), Gaps = 12/268 (4%)
Query: 21 VGSKQFEKVLAVFTDMVESG-IRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPS 79
V +K+ E+ L VF+ M+ G ++P+V +Y + A L L +G ++ + K +
Sbjct: 306 VENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKN 365
Query: 80 VFVYNLVLGGLCKVRRVKDARKLFDEML--HRNLVPNTVTYNTLIDGYCKVGEMEKAFSL 137
V + +L K + ARK+FD L R+L+ ++N++I Y G ++A +
Sbjct: 366 EIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLI----SWNSMIAVYAHHGHGKEAIEM 421
Query: 138 KARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSAC 197
+M+ +PS +TY LL +G V E ++ + LP D
Sbjct: 422 YNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCG 481
Query: 198 SNGNGSLRANVA----ARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYN 253
G N AR+ Y A+L+ + AKEV+ K++E G + +Y
Sbjct: 482 RAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAG-TYV 540
Query: 254 ILVNAYCHEGYVEKAIQTAEQMEERGLK 281
++ N Y G E+A + +M+E+GLK
Sbjct: 541 LMSNIYAANGKREEAAEMRMKMKEKGLK 568
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 167/347 (48%), Gaps = 68/347 (19%)
Query: 58 LKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVT 117
++D K FE M E++ V +N +LGGL K ++DAR+LFDEM R+L+ +
Sbjct: 170 VRDAMKLFEKMS--ERDTVS-----WNSMLGGLVKAGELRDARRLFDEMPQRDLI----S 218
Query: 118 YNTLIDGYCKVGEMEKAFSLKARM-----------------------------KAPNAEP 148
+NT++DGY + EM KAF L +M K P
Sbjct: 219 WNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAK 278
Query: 149 SVITYNCLLGGLCSSGRVNDAREVLVEMEGNG--FLPGGFSRIVFDDDSACS-NGNGSL- 204
+V+T+ ++ G G + +A ++ +M +G F I+ +AC+ +G SL
Sbjct: 279 NVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISIL----AACTESGLLSLG 334
Query: 205 --------RANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILV 256
R+N+ + + +ALL+ + + G ++KA +V + + +V S+N ++
Sbjct: 335 MRIHSILKRSNLGS--NAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLV----SWNTML 388
Query: 257 NAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK--G 314
+ G+ ++AI+ +M G++P VTF ++ G +D+ + M EK
Sbjct: 389 HGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSM-EKVYD 447
Query: 315 IAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
+ P +E Y L++ GR+ + ++++ + M+PNV+ +G+L+
Sbjct: 448 LVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMP---MEPNVVIWGALL 491
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/357 (19%), Positives = 153/357 (42%), Gaps = 28/357 (7%)
Query: 15 RLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKE 74
+L L +Q + VF + E P+V + A + F + M++
Sbjct: 56 KLISALSLCRQTNLAVRVFNQVQE----PNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRF 111
Query: 75 RVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEM--E 132
+ F Y +L + + + + + L + N LID Y + G +
Sbjct: 112 GLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVR 171
Query: 133 KAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFD 192
A L +M +E +++N +LGGL +G + DAR + EM + + D
Sbjct: 172 DAMKLFEKM----SERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWN---TMLD 224
Query: 193 DDSACSNGNGSLRANVAARIDER---TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQ 249
+ C + + + ++ ER ++S ++ G+ + G +E A+ + K+ +P++
Sbjct: 225 GYARCREMSKAFE--LFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMP----LPAK 278
Query: 250 --ISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWV 307
+++ I++ Y +G +++A + +QM GLK +++ E+G + R
Sbjct: 279 NVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIH 338
Query: 308 KKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
+ + N+L++ Y + N K F++ +I KK +++S+ ++++ L
Sbjct: 339 SILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGL 391
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 156/329 (47%), Gaps = 24/329 (7%)
Query: 42 RPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARK 101
+PD ++ ++ AV + D+ G ++ G + SV V ++ + DARK
Sbjct: 113 KPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARK 172
Query: 102 LFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLC 161
+FDEML V + +N L+ GY KVGEM++A SL M P + +++ C++ G
Sbjct: 173 MFDEML----VKDVNVWNALLAGYGKVGEMDEARSLLEMM--PCWVRNEVSWTCVISGYA 226
Query: 162 SSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSN-GNGSLRANVAARIDERTY--- 217
SGR ++A EV M P + + SAC++ G+ L + + +D R
Sbjct: 227 KSGRASEAIEVFQRMLMENVEPDEVTLLAV--LSACADLGSLELGERICSYVDHRGMNRA 284
Query: 218 ----SALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAE 273
+A+++ + + G I KA +V + E VV ++ ++ G+ +A+
Sbjct: 285 VSLNNAVIDMYAKSGNITKALDVFECVNERNVV----TWTTIIAGLATHGHGAEALAMFN 340
Query: 274 QMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK-GIAPTLETYNSLINGYGRI 332
+M + G++P+ VTF +++ G VD +R M K GI P +E Y +I+ GR
Sbjct: 341 RMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRA 400
Query: 333 SNFVKCFEILEEIEKKGMKPNVISYGSLI 361
K E E I+ K N +GSL+
Sbjct: 401 G---KLREADEVIKSMPFKANAAIWGSLL 426
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 171/377 (45%), Gaps = 11/377 (2%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
+R+ GV V S + + L K F ++ V MV G+ PD+ A+++ V +
Sbjct: 142 VREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHY 201
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ + EL E V S +N +L LC+ V A+ +F+ N+ ++ +YN
Sbjct: 202 VRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAK-KGNIPFDSCSYNI 260
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+I G+ K+GE+E+ + M P ++Y+ L+ GL +GR+ND+ E+ ++ G
Sbjct: 261 MISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKG 320
Query: 181 FLPGG--FSRIVFDDDSACSNGNGSLRANVAARIDER------TYSALLNGFCRVGRIEK 232
+P ++ ++ + SA + + S+R +DE TYS L++G + ++
Sbjct: 321 NVPDANVYNAMICNFISA-RDFDESMRY-YRRMLDEECEPNLETYSKLVSGLIKGRKVSD 378
Query: 233 AKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLIN 292
A E+ +++ GV+P+ + C G A+ ++ + G + S + L+
Sbjct: 379 ALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLK 438
Query: 293 KFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKP 352
+ G+ +M E G +E Y +++G I + ++EE +KG P
Sbjct: 439 RLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCP 498
Query: 353 NVISYGSLINCLCKDRK 369
N Y L + L K
Sbjct: 499 NRFVYSRLSSKLMASNK 515
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 138/316 (43%), Gaps = 15/316 (4%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
GV S S N L L +VF + + I D SY + L ++++
Sbjct: 216 GVKCSTESFNALLRCLCERSHVSAAKSVF-NAKKGNIPFDSCSYNIMISGWSKLGEVEEM 274
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
+++ M + GP Y+ ++ GL + R+ D+ ++FD + H+ VP+ YN +I
Sbjct: 275 EKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICN 334
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
+ + +++ RM EP++ TY+ L+ GL +V+DA E+ EM G LP
Sbjct: 335 FISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPT 394
Query: 185 GFSRIVFDDDSACSNG---------NGSLRANVAARIDERTYSALLNGFCRVGRIEKAKE 235
F CS G S +A RI E Y LL R G+
Sbjct: 395 TGLVTSF-LKPLCSYGPPHAAMVIYQKSRKA--GCRISESAYKLLLKRLSRFGKCGMLLN 451
Query: 236 VLAKLVENGVVPSQIS-YNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
V ++ E+G PS + Y +V+ C G++E A+ E+ +G P+ ++ L +K
Sbjct: 452 VWDEMQESG-YPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKL 510
Query: 295 CETGEVDQAERWVKKM 310
+ + + A + K+
Sbjct: 511 MASNKTELAYKLFLKI 526
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 3/170 (1%)
Query: 216 TYSALLNGFCRVGRIEKAKEVLAKLVENGVVP-SQISYNILVNAYCHEGYVEKAIQTAEQ 274
+++ALL C + AK V + G +P SYNI+++ + G VE+ + ++
Sbjct: 223 SFNALLRCLCERSHVSAAKSVFN--AKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKE 280
Query: 275 MEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISN 334
M E G P ++++ LI TG ++ + + KG P YN++I + +
Sbjct: 281 MVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARD 340
Query: 335 FVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
F + + + +PN+ +Y L++ L K RK+ DA + +M SRG
Sbjct: 341 FDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRG 390
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 184/453 (40%), Gaps = 89/453 (19%)
Query: 10 VRSVNRLFETLVG--SKQFEKVLAV--FTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG- 64
++ +N + TL+ SK KV A+ M + G++PD V+ G ++ ++ K
Sbjct: 218 IKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAE 277
Query: 65 --FELMGCMEKE---RVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYN 119
F+ C E + V S + YN ++ K ++K+A + F ML +VP TVT+N
Sbjct: 278 EFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFN 337
Query: 120 TLIDGYCKVGEMEKAFSLKARMK---APNA------------------------------ 146
T+I Y G++ + SL MK AP+
Sbjct: 338 TMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDG 397
Query: 147 -EPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG-----FLPGGFSRIVFDDDSACSNG 200
+P ++Y LL V +A ++ EM+ + + +R+ + + +
Sbjct: 398 LKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSW 457
Query: 201 NGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVL--AKLVENGVVPSQISYNILVNA 258
+ R +VA + YSA ++ + G + +A+ V + V V I YN+++ A
Sbjct: 458 SWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTV---IEYNVMIKA 514
Query: 259 YCHEGYVEKAIQTAEQMEERGLKPSYVTFNTL---------------------------- 290
Y EKA + E M G+ P T+NTL
Sbjct: 515 YGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSD 574
Query: 291 -------INKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILE 343
I+ F + G+++ AE K+M+E I P + Y LIN + N + +E
Sbjct: 575 CIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVE 634
Query: 344 EIEKKGMKPNVISYGSLINCLCKDRKLLDAEIV 376
+++ G+ N + Y SLI K L +AE +
Sbjct: 635 AMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAI 667
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 158/389 (40%), Gaps = 87/389 (22%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAV----------EAAVM 57
P R+ N L + E+ A F +M + G++PD VSY + EA +
Sbjct: 365 PDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGL 424
Query: 58 LKDLD-------------------------------KGFELMGCMEKERVGPSVFVYNLV 86
+ ++D K F + G M E ++ Y
Sbjct: 425 IAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYG-- 482
Query: 87 LGGLCKVRRVKDARKLF---DEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKA 143
+ + +A ++F E+ R ++ YN +I Y EKA L M +
Sbjct: 483 -----ERGYLSEAERVFICCQEVNKRTVIE----YNVMIKAYGISKSCEKACELFESMMS 533
Query: 144 PNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGS 203
P TYN L+ L S+ + R L +M G++
Sbjct: 534 YGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVS-------------------- 573
Query: 204 LRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEG 263
D Y A+++ F ++G++ A+EV ++VE + P + Y +L+NA+ G
Sbjct: 574 ---------DCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTG 624
Query: 264 YVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLE---KGIAPTLE 320
V++A+ E M+E G+ + V +N+LI + + G +D+AE +K+L+ K P +
Sbjct: 625 NVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVY 684
Query: 321 TYNSLINGYGRISNFVKCFEILEEIEKKG 349
T N +IN Y S K I + ++++G
Sbjct: 685 TSNCMINLYSERSMVRKAEAIFDSMKQRG 713
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 140/330 (42%), Gaps = 33/330 (10%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M GV P + N L + L + K M E+G D + Y + + V L
Sbjct: 531 MMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQ 590
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L+ E+ M + + P V VY +++ V+ A + M + N+V YN+
Sbjct: 591 LNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNS 650
Query: 121 LIDGYCKVGEMEKAFSLKARMKAP---NAEPSVITYNCLLGGLCSSGRVNDAREVLVEME 177
LI Y KVG +++A ++ ++ P V T NC++ V A + M+
Sbjct: 651 LIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMK 710
Query: 178 GNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVL 237
G +E T++ +L + + GR E+A ++
Sbjct: 711 QRG------------------------------EANEFTFAMMLCMYKKNGRFEEATQIA 740
Query: 238 AKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCET 297
++ E ++ +SYN ++ + +G ++A++T ++M G++P TF +L +
Sbjct: 741 KQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKL 800
Query: 298 GEVDQAERWVKKMLEKGIAPTLETYNSLIN 327
G +A R ++++ +K I LE + S ++
Sbjct: 801 GMSKKAVRKIEEIRKKEIKRGLELWISTLS 830
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 147/328 (44%), Gaps = 44/328 (13%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G +P++ E L + E L+ + + + + R ++ E AV ++ +
Sbjct: 126 GCIPAI------LEALDSIEDVEDALSPWAERLSNKERTIILKEQIHWERAV---EIFEW 176
Query: 65 FELMGCMEKERVGPSVFVYNL---VLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTL 121
F+ GC E +V YN+ +LG CK R V+ L+DEM+ + + P TY TL
Sbjct: 177 FKSKGCYE-----LNVIHYNIMLRILGKACKWRYVQS---LWDEMIRKGIKPINSTYGTL 228
Query: 122 IDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGF 181
ID Y K G A +M +P +T +L + A E
Sbjct: 229 IDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEF--------- 279
Query: 182 LPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLV 241
F + D++ A S+ + TY+ +++ + + G+I++A E +++
Sbjct: 280 ----FKKWSCDENKADSH----------VCLSSYTYNTMIDTYGKSGQIKEASETFKRML 325
Query: 242 ENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVD 301
E G+VP+ +++N +++ Y + G + + + M+ P T+N LI+ + +++
Sbjct: 326 EEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH-CAPDTRTYNILISLHTKNNDIE 384
Query: 302 QAERWVKKMLEKGIAPTLETYNSLINGY 329
+A + K+M + G+ P +Y +L+ +
Sbjct: 385 RAGAYFKEMKDDGLKPDPVSYRTLLYAF 412
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 140/330 (42%), Gaps = 12/330 (3%)
Query: 45 VVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFD 104
V+ Y ++A + K +K EL M V P YN ++ L R +
Sbjct: 505 VIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLE 564
Query: 105 EMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSG 164
+M V + + Y +I + K+G++ A + M N EP V+ Y L+ +G
Sbjct: 565 KMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTG 624
Query: 165 RVNDAREVLVEMEGNGFLPGG----------FSRIVFDDDSACSNGNGSLRANVAARIDE 214
V A + M+ G +PG ++++ + D++ N D
Sbjct: 625 NVQQAMSYVEAMKEAG-IPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDV 683
Query: 215 RTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQ 274
T + ++N + + KA+ + + + G ++ ++ +++ Y G E+A Q A+Q
Sbjct: 684 YTSNCMINLYSERSMVRKAEAIFDSMKQRGEA-NEFTFAMMLCMYKKNGRFEEATQIAKQ 742
Query: 275 MEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISN 334
M E + +++N+++ F G +A K+M+ GI P T+ SL ++
Sbjct: 743 MREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGM 802
Query: 335 FVKCFEILEEIEKKGMKPNVISYGSLINCL 364
K +EEI KK +K + + S ++ L
Sbjct: 803 SKKAVRKIEEIRKKEIKRGLELWISTLSSL 832
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 84/175 (48%), Gaps = 7/175 (4%)
Query: 216 TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKA------I 269
TY L++ + + G A L K+ + G+ P +++ I++ Y +KA
Sbjct: 224 TYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKW 283
Query: 270 QTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGY 329
E + + S T+NT+I+ + ++G++ +A K+MLE+GI PT T+N++I+ Y
Sbjct: 284 SCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIY 343
Query: 330 GRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
G + +++ + K P+ +Y LI+ K+ + A +M G
Sbjct: 344 GNNGQLGEVTSLMKTM-KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDG 397
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 140/305 (45%), Gaps = 35/305 (11%)
Query: 79 SVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLK 138
S +YN +L L K+RR ++ ++FDEM R+ N TY L++ Y ++++A +
Sbjct: 142 SSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVF 201
Query: 139 ARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACS 198
R K + ++ ++ LL LC V F+ +F CS
Sbjct: 202 ERRKEFGIDDDLVAFHGLLMWLCRYKHVE------------------FAETLF-----CS 238
Query: 199 NGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNA 258
R I + + +LNG+C +G + +AK ++ + P +SY ++NA
Sbjct: 239 R-----RREFGCDI--KAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINA 291
Query: 259 YCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPT 318
+G + KA++ M + P N +I+ C + +A +++ EKG P
Sbjct: 292 LTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPN 351
Query: 319 LETYNSLINGYGRISNFVKCFEILEEIEKKG--MKPNVISYGSLINCLCKDRKLLDAEIV 376
+ TYNSL+ +I K +E++EE+E KG PN +++ L+ + + D +IV
Sbjct: 352 VVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSK---DVDIV 408
Query: 377 LGDMA 381
L MA
Sbjct: 409 LERMA 413
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 34/252 (13%)
Query: 33 FTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCK 92
+ D++ S RPDVVSYG + A L K EL M R P V + N V+ LC
Sbjct: 270 WKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCF 329
Query: 93 VRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARM--KAPNAEPSV 150
+R+ +A ++F E+ + PN VTYN+L+ CK+ EK + L M K + P+
Sbjct: 330 KKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPND 389
Query: 151 ITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAA 210
+T++ LL S R D VL M N
Sbjct: 390 VTFSYLLK---YSQRSKDVDIVLERMAKN-----------------------------KC 417
Query: 211 RIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQ 270
+ Y+ + + + + EK +E+ +++ +G+ P Q +Y I ++ +G + +A+
Sbjct: 418 EMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALS 477
Query: 271 TAEQMEERGLKP 282
++M +G+ P
Sbjct: 478 YFQEMMSKGMVP 489
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 160/383 (41%), Gaps = 41/383 (10%)
Query: 7 LPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFE 66
L S N + + L ++FE+ VF +M + + +Y + +D E
Sbjct: 140 LSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVD---E 196
Query: 67 LMGCMEKER---VGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLID 123
+G E+ + + + ++ +L LC+ + V+ A LF R + N +++
Sbjct: 197 AVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSR-RREFGCDIKAMNMILN 255
Query: 124 GYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP 183
G+C +G + +A + A P V++Y ++ L G++ A E+ M P
Sbjct: 256 GWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNP 315
Query: 184 GGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVEN 243
D C+N +++ C RI +A EV ++ E
Sbjct: 316 ---------DVKICNN--------------------VIDALCFKKRIPEALEVFREISEK 346
Query: 244 GVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERG--LKPSYVTFNTLINKFCETGEVD 301
G P+ ++YN L+ C EK + E+ME +G P+ VTF+ L+ + +VD
Sbjct: 347 GPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVD 406
Query: 302 QAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
+++M + T + YN + Y + K EI E+E+ G+ P+ +Y I
Sbjct: 407 IV---LERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRI 463
Query: 362 NCLCKDRKLLDAEIVLGDMASRG 384
+ L K+ +A +M S+G
Sbjct: 464 HGLHTKGKIGEALSYFQEMMSKG 486
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 147/353 (41%), Gaps = 36/353 (10%)
Query: 2 RKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDL 61
++DG + + ++ L + + ++ + VF E GI D+V++ + K +
Sbjct: 171 KRDGFV-NEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHV 229
Query: 62 DKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTL 121
+ E + C + G + N++L G C + V +A++ + +++ P+ V+Y T+
Sbjct: 230 EFA-ETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTM 288
Query: 122 IDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGF 181
I+ K G++ KA L M P V N ++ LC R+ +A EV E+ G
Sbjct: 289 INALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGP 348
Query: 182 LPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLV 241
P NV TY++LL C++ R EK E++ ++
Sbjct: 349 DP-----------------------NVV------TYNSLLKHLCKIRRTEKVWELVEEME 379
Query: 242 ENG--VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGE 299
G P+ ++++ L+ V+ + E+M + + + +N + + + +
Sbjct: 380 LKGGSCSPNDVTFSYLLKYSQRSKDVDIVL---ERMAKNKCEMTSDLYNLMFRLYVQWDK 436
Query: 300 VDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKP 352
++ +M G+ P TY I+G + +E+ KGM P
Sbjct: 437 EEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVP 489
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 146/336 (43%), Gaps = 36/336 (10%)
Query: 56 VMLKDLDKG--FELMGCMEKERVGPSV----FVYNLVLGGLCKVRRVKDARKLFDEMLHR 109
V +K L G F+L+ M E V V Y+ ++ + A + F+ M
Sbjct: 191 VTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKT 250
Query: 110 NLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDA 169
L+P+ VTY+ ++D Y K G++E+ SL R A +P I ++ L +G +
Sbjct: 251 GLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGI 310
Query: 170 REVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGR 229
R VL EM+ P NV Y+ LL R G+
Sbjct: 311 RYVLQEMKSMDVKP-----------------------NVVV------YNTLLEAMGRAGK 341
Query: 230 IEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNT 289
A+ + +++E G+ P++ + LV Y + A+Q E+M+ + ++ +NT
Sbjct: 342 PGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNT 401
Query: 290 LINKFCETGEVDQAERWVKKMLEK-GIAPTLETYNSLINGYGRISNFVKCFEILEEIEKK 348
L+N + G ++AER M E P +Y +++N YG K E+ EE+ K
Sbjct: 402 LLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKA 461
Query: 349 GMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
G++ NV+ L+ CL K +++ D V RG
Sbjct: 462 GVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRG 497
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 124/282 (43%), Gaps = 28/282 (9%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M K G++P + + + + S + E+VL+++ V +G +PD +++ + D
Sbjct: 247 MYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGD 306
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
D ++ M+ V P+V VYN +L + + + AR LF+EML L PN T
Sbjct: 307 YDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTA 366
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L+ Y K A L MKA I YN LL +C+ + + E L
Sbjct: 367 LVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLL-NMCADIGLEEEAERL------- 418
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
F+D ++ +V R D +Y+A+LN + G+ EKA E+ ++
Sbjct: 419 ----------FND----------MKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEM 458
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKP 282
++ GV + + LV ++ + + +RG+KP
Sbjct: 459 LKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKP 500
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 155/369 (42%), Gaps = 36/369 (9%)
Query: 14 NRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEK 73
N ++L +QF+ + + +MV+ G+ D ++Y + A +K E M K
Sbjct: 190 NVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYK 249
Query: 74 ERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEK 133
+ P Y+ +L K +V++ L++ + P+ + ++ L + + G+ +
Sbjct: 250 TGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDG 309
Query: 134 AFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDD 193
+ MK+ + +P+V+ YN LL + +G+ AR + EM G P
Sbjct: 310 IRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTP---------- 359
Query: 194 DSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYN 253
+E+T +AL+ + + A ++ ++ I YN
Sbjct: 360 -------------------NEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYN 400
Query: 254 ILVNAYCHEGYVEKAIQTAEQMEER-GLKPSYVTFNTLINKFCETGEVDQAERWVKKMLE 312
L+N G E+A + M+E +P ++ ++N + G+ ++A ++ML+
Sbjct: 401 TLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLK 460
Query: 313 KGIAPTLETYNSLINGYG---RISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRK 369
G+ + L+ G RI + V F++ K+G+KP+ G L++ +
Sbjct: 461 AGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDL---SIKRGVKPDDRLCGCLLSVMALCES 517
Query: 370 LLDAEIVLG 378
DAE V+
Sbjct: 518 SEDAEKVMA 526
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 164/346 (47%), Gaps = 13/346 (3%)
Query: 32 VFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLC 91
V M+ G P+ +G+ + + + F+++G M + SV V+++++ G
Sbjct: 199 VLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFF 258
Query: 92 KVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVI 151
+ + A LF++M+ PN VTY +LI G+ +G +++AF++ +++++ P ++
Sbjct: 259 RSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIV 318
Query: 152 TYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG--GFSRIVFDDDSACSNGNGSLRANVA 209
N ++ GR +AR+V +E +P F+ I+ S C +G L +
Sbjct: 319 LCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASIL---SSLCLSGKFDLVPRIT 375
Query: 210 ARI----DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYV 265
I D T + L N F ++G A +VL+ + +Y + ++A C G
Sbjct: 376 HGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAP 435
Query: 266 EKAIQTAEQM--EERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYN 323
AI+ + + E++ L + + +I+ E G+ + A K+ + + + +Y
Sbjct: 436 RAAIKMYKIIIKEKKHLDAHF--HSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYT 493
Query: 324 SLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRK 369
I G R + + + ++++ G+ PN +Y ++I+ LCK+++
Sbjct: 494 VAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKE 539
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 158/350 (45%), Gaps = 21/350 (6%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G+ SV + L S + +K + +F M++ G P++V+Y ++ V L +D+
Sbjct: 242 GISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEA 301
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
F ++ ++ E + P + + NL++ ++ R ++ARK+F + R LVP+ T+ +++
Sbjct: 302 FTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSS 361
Query: 125 YCKVGEMEKAFSLKARM-KAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP 183
C G+ F L R+ + ++T N L G + A +VL M F
Sbjct: 362 LCLSGK----FDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFAL 417
Query: 184 GGFSRIVFDDDSACSNGNGSLRANVAA---------RIDERTYSALLNGFCRVGRIEKAK 234
++ V+ SA G G+ RA + +D +SA+++ +G+ A
Sbjct: 418 DCYTYTVY--LSALCRG-GAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAV 474
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
+ + + +SY + + +E+A M+E G+ P+ T+ T+I+
Sbjct: 475 HLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGL 534
Query: 295 CETGEVDQAERWVKKMLEKGIA----PTLETYNSLINGYGRISNFVKCFE 340
C+ E ++ + +++ +++G+ + Y+ L G S F FE
Sbjct: 535 CKEKETEKVRKILRECIQEGVELDPNTKFQVYSLLSRYRGDFSEFRSVFE 584
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 6/226 (2%)
Query: 164 GRVND-AREVLVEMEGNGFLPGGFS-RIVFDDDSACSNGNGSLRANVAARI-DERTYSAL 220
G + D A EV M GF+P + ++ D + + NG+L R + ++
Sbjct: 121 GHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFFSFDIA 180
Query: 221 LNGFC-RVGR--IEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEE 277
L+ FC R GR + K VL +++ G P++ + ++ C G V +A Q M
Sbjct: 181 LSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMIC 240
Query: 278 RGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVK 337
G+ S ++ L++ F +GE +A KM++ G +P L TY SLI G+ + +
Sbjct: 241 SGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDE 300
Query: 338 CFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
F +L +++ +G+ P+++ +I+ + + +A V + R
Sbjct: 301 AFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKR 346
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 119/273 (43%), Gaps = 45/273 (16%)
Query: 27 EKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKE--RVGPSVFVYN 84
++ LA F M E +PDV +Y + A + + K L+ M+ R P + Y
Sbjct: 182 KEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYT 241
Query: 85 LVLGGLCKV-----------RRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEK 133
+++ C+ RR+ +A ++F EML R VP+ VTYN LIDG CK + +
Sbjct: 242 ILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGR 301
Query: 134 AFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEME--GNGFLPGGFSRIVF 191
A L MK P+ +TYN + + + A E++ M+ G+G +PG
Sbjct: 302 ALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHG-VPGS------ 354
Query: 192 DDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQIS 251
TY+ L++ R +A++++ ++VE G+VP + +
Sbjct: 355 -----------------------STYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYT 391
Query: 252 YNILVNAYCHEGYVEKAIQTAEQMEERGLKPSY 284
Y ++ +A EG + + G++ Y
Sbjct: 392 YKLVCDALSSEGLASTLDEELHKRMREGIQQRY 424
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 117/269 (43%), Gaps = 41/269 (15%)
Query: 112 VPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDARE 171
V T + L+ + G +++A + RMK + +P V YN ++ LC G AR
Sbjct: 162 VVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARF 221
Query: 172 VLVEMEGNGF-LPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVG-- 228
+L +M+ GF P D TY+ L++ +CR G
Sbjct: 222 LLDQMQLPGFRYPP----------------------------DTYTYTILISSYCRYGMQ 253
Query: 229 ---------RIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERG 279
R+ +A + +++ G VP ++YN L++ C + +A++ E M+ +G
Sbjct: 254 TGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKG 313
Query: 280 LKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIA-PTLETYNSLINGYGRISNFVKC 338
P+ VT+N+ I + T E++ A ++ M + G P TY LI+ +
Sbjct: 314 CVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEA 373
Query: 339 FEILEEIEKKGMKPNVISYGSLINCLCKD 367
+++ E+ + G+ P +Y + + L +
Sbjct: 374 RDLVVEMVEAGLVPREYTYKLVCDALSSE 402
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 14/157 (8%)
Query: 242 ENGV-VPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
ENG V + S L+ EG+V++A+ T +M+E KP +NT+IN C G
Sbjct: 157 ENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNF 216
Query: 301 DQAERWVKKMLEKGI--APTLETYNSLINGYGRISNFVKCFE-----------ILEEIEK 347
+A + +M G P TY LI+ Y R C + + E+
Sbjct: 217 KKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLF 276
Query: 348 KGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+G P+V++Y LI+ CK ++ A + DM ++G
Sbjct: 277 RGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKG 313
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 1/126 (0%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G +P V + N L + + + + L +F DM G P+ V+Y + + +++
Sbjct: 278 GFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGA 337
Query: 65 FELMGCMEKERVG-PSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLID 123
E+M M+K G P Y ++ L + RR +AR L EM+ LVP TY + D
Sbjct: 338 IEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCD 397
Query: 124 GYCKVG 129
G
Sbjct: 398 ALSSEG 403
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 138/323 (42%), Gaps = 14/323 (4%)
Query: 72 EKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEM 131
E+ P Y +L L K + A+KLFDEML L P Y L+ Y + +
Sbjct: 116 EQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLI 175
Query: 132 EKAFSLKARMKA-PNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP------- 183
+ AFS+ +MK+ P +P V TY+ LL + + + + EM+ P
Sbjct: 176 DDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNI 235
Query: 184 --GGFSRI-VFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
G+ R+ FD + + + A + D T + +L+ F +G+I+ + K
Sbjct: 236 VLSGYGRVGRFDQMEKVLS---DMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKF 292
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
G+ P ++NIL+ +Y + +K E M + + T+N +I F + G+
Sbjct: 293 RNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDA 352
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
E +M +G+ +T+ LINGY F K ++ K + N Y ++
Sbjct: 353 KNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAV 412
Query: 361 INCLCKDRKLLDAEIVLGDMASR 383
I+ K L++ E V M R
Sbjct: 413 ISACAKADDLIEMERVYIRMKER 435
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 123/299 (41%), Gaps = 13/299 (4%)
Query: 96 VKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNC 155
+K+ +K D N NTVT TL D K ++ + +P TY
Sbjct: 71 IKNVKKKLDRRSKANGWVNTVT-ETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMK 129
Query: 156 LLGGLCSSGRVNDAREVLVEMEGNGFLP---------GGFSRIVFDDDSACSNGNGSLRA 206
LL L SG+ N A+++ EM G P ++R DD+ + +++
Sbjct: 130 LLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAF--SILDKMKS 187
Query: 207 NVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVE 266
+ D TYS LL + + + ++ E + P+ ++ NI+++ Y G +
Sbjct: 188 FPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFD 247
Query: 267 KAIQT-AEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSL 325
+ + ++ + KP T N +++ F G++D E W +K GI P T+N L
Sbjct: 248 QMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNIL 307
Query: 326 INGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
I YG+ + K ++E + K +Y ++I + E+ M S G
Sbjct: 308 IGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEG 366
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/349 (18%), Positives = 133/349 (38%), Gaps = 31/349 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVE-SGIRPDVVSYGKAVEAAVMLK 59
M ++G+ P+V L S + ++ M +PDV +Y ++A V
Sbjct: 150 MLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDAS 209
Query: 60 DLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLV-PNTVTY 118
D L M++ + P+ N+VL G +V R K+ +ML P+ T
Sbjct: 210 QFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTM 269
Query: 119 NTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEG 178
N ++ + +G+++ S + + EP T+N L+G R+ D ++E
Sbjct: 270 NIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSY-GKKRMYDKMSSVMEYMR 328
Query: 179 NGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLA 238
P S TY+ ++ F VG + +
Sbjct: 329 KLEFPWTTS----------------------------TYNNIIEAFADVGDAKNMELTFD 360
Query: 239 KLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETG 298
++ G+ ++ L+N Y + G K I + + + + + +N +I+ +
Sbjct: 361 QMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKAD 420
Query: 299 EVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEK 347
++ + ER +M E+ T+ ++ Y + K + + +E +K
Sbjct: 421 DLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEGMNDKIYYLEQERQK 469
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 174/418 (41%), Gaps = 68/418 (16%)
Query: 10 VRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMG 69
V+ +N + S +++ ++ +F M + G + V +Y ++ V K++ K E+
Sbjct: 98 VQDLNVILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSSCIKF-VGAKNVSKALEIYQ 155
Query: 70 CMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKV- 128
+ E +V++ N +L L K ++ KLFD+M L P+ VTYNTL+ G KV
Sbjct: 156 SIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVK 215
Query: 129 -----------------------------------GEMEKAFSLKARMKAPNAEPSVITY 153
G E+A + +MK P++ Y
Sbjct: 216 NGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHY 275
Query: 154 NCLLGGLCSSGRVNDAREVLVEMEGNGFLP---------------GGFSR---IVFDDDS 195
+ LL G A E++ EM+ G +P G F R ++ + +S
Sbjct: 276 SSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELES 335
Query: 196 ACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNIL 255
A N E Y L++G + G++E+A+ + + GV + +I+
Sbjct: 336 AGYAEN------------EMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIM 383
Query: 256 VNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGI 315
++A C ++A + + E K V NT++ +C GE++ R +KKM E+ +
Sbjct: 384 ISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAV 443
Query: 316 APTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDA 373
+P T++ LI + + + ++ ++ KG + SLI L K R +A
Sbjct: 444 SPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGKIRAQAEA 501
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 129/288 (44%), Gaps = 11/288 (3%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQ-FEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLK 59
M++DG+ P V + N L + K + K + + ++ +GI+ D V YG +
Sbjct: 192 MKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNG 251
Query: 60 DLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYN 119
++ + M+ E P+++ Y+ +L K A +L EM LVPN V
Sbjct: 252 RSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMT 311
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN 179
TL+ Y K G +++ L + +++ + + Y L+ GL +G++ +AR + +M+G
Sbjct: 312 TLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGK 371
Query: 180 GFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTY--------SALLNGFCRVGRIE 231
G G++ + SA A +R E TY + +L +CR G +E
Sbjct: 372 GVRSDGYANSIM--ISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEME 429
Query: 232 KAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERG 279
++ K+ E V P +++IL+ + E A QT M +G
Sbjct: 430 SVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKG 477
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 129/302 (42%), Gaps = 32/302 (10%)
Query: 84 NLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKA 143
N++L R +D +LF+ M + + TY++ I + + KA + +
Sbjct: 102 NVILRDFGISGRWQDLIQLFEWMQQHGKI-SVSTYSSCIK-FVGAKNVSKALEIYQSIPD 159
Query: 144 PNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGS 203
+ + +V N +L L +G+++ ++ +M+ +G P
Sbjct: 160 ESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKP-------------------- 199
Query: 204 LRANVAARIDERTYSALLNGFCRVGR-IEKAKEVLAKLVENGVVPSQISYNILVNAYCHE 262
D TY+ LL G +V KA E++ +L NG+ + Y ++
Sbjct: 200 ---------DVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASN 250
Query: 263 GYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETY 322
G E+A +QM+ G P+ +++L+N + G+ +A+ + +M G+ P
Sbjct: 251 GRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMM 310
Query: 323 NSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMAS 382
+L+ Y + F + E+L E+E G N + Y L++ L K KL +A + DM
Sbjct: 311 TTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKG 370
Query: 383 RG 384
+G
Sbjct: 371 KG 372
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 174/386 (45%), Gaps = 54/386 (13%)
Query: 14 NRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEK 73
N L + + +K+F++ ++V+ M+ GIR D +Y ++A L D G + G +E
Sbjct: 153 NVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEV 212
Query: 74 ERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEK 133
+++V N ++ + +V AR+LFD M R + V++N +I+ Y ++ +
Sbjct: 213 SSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSER----DAVSWNAIINCYTSEEKLGE 268
Query: 134 AFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDD 193
AF L RM E S++T+N + GG +G A +V M G + I +
Sbjct: 269 AFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMI--NG 326
Query: 194 DSACSNGNGSLR------------ANVAARIDE--------------------------- 214
ACS+ G+L+ + + ID
Sbjct: 327 LKACSH-IGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEA 385
Query: 215 ---RTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQ- 270
T++++++GF R E+ +L +++ +G P+ I+ ++ + G ++ +
Sbjct: 386 NSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEF 445
Query: 271 TAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYG 330
+ + K + +N+L++ + ++GE+ A+R M ++ TY SLI+GYG
Sbjct: 446 HCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKV----TYTSLIDGYG 501
Query: 331 RISNFVKCFEILEEIEKKGMKPNVIS 356
R+ +++++ G+KP+ ++
Sbjct: 502 RLGKGEVALAWFKDMDRSGIKPDHVT 527
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 97/233 (41%), Gaps = 33/233 (14%)
Query: 9 SVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELM 68
S+ + N + +++ E+ + +M+ SG P+ ++ + + +L G E
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFH 446
Query: 69 G-CMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
+ ++ + ++N ++ K + A+++FD M R+ VTY +LIDGY +
Sbjct: 447 CYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRD----KVTYTSLIDGYGR 502
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
+G+ E A + M +P +T +L S V + + +ME
Sbjct: 503 LGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEH--------- 553
Query: 188 RIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
VF R+ YS +++ +CR G ++KA+++ +
Sbjct: 554 --VF-----------------GIRLRLEHYSCMVDLYCRAGYLDKARDIFHTI 587
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 174/386 (45%), Gaps = 54/386 (13%)
Query: 14 NRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEK 73
N L + + +K+F++ ++V+ M+ GIR D +Y ++A L D G + G +E
Sbjct: 153 NVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEV 212
Query: 74 ERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEK 133
+++V N ++ + +V AR+LFD M R + V++N +I+ Y ++ +
Sbjct: 213 SSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSER----DAVSWNAIINCYTSEEKLGE 268
Query: 134 AFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDD 193
AF L RM E S++T+N + GG +G A +V M G + I +
Sbjct: 269 AFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMI--NG 326
Query: 194 DSACSNGNGSLR------------ANVAARIDE--------------------------- 214
ACS+ G+L+ + + ID
Sbjct: 327 LKACSH-IGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEA 385
Query: 215 ---RTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQ- 270
T++++++GF R E+ +L +++ +G P+ I+ ++ + G ++ +
Sbjct: 386 NSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEF 445
Query: 271 TAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYG 330
+ + K + +N+L++ + ++GE+ A+R M ++ TY SLI+GYG
Sbjct: 446 HCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKV----TYTSLIDGYG 501
Query: 331 RISNFVKCFEILEEIEKKGMKPNVIS 356
R+ +++++ G+KP+ ++
Sbjct: 502 RLGKGEVALAWFKDMDRSGIKPDHVT 527
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 97/233 (41%), Gaps = 33/233 (14%)
Query: 9 SVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELM 68
S+ + N + +++ E+ + +M+ SG P+ ++ + + +L G E
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFH 446
Query: 69 G-CMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
+ ++ + ++N ++ K + A+++FD M R+ VTY +LIDGY +
Sbjct: 447 CYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRD----KVTYTSLIDGYGR 502
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
+G+ E A + M +P +T +L S V + + +ME
Sbjct: 503 LGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEH--------- 553
Query: 188 RIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
VF R+ YS +++ +CR G ++KA+++ +
Sbjct: 554 --VF-----------------GIRLRLEHYSCMVDLYCRAGYLDKARDIFHTI 587
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 171/381 (44%), Gaps = 33/381 (8%)
Query: 4 DGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDK 63
+G P + VN L V +F M + +V+S+ + A K K
Sbjct: 90 NGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQR----NVISWTTMISAYSKCKIHQK 145
Query: 64 GFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLID 123
EL+ M ++ V P+V+ Y+ VL + D R L ++ L + + LID
Sbjct: 146 ALELLVLMLRDNVRPNVYTYSSVLRS---CNGMSDVRMLHCGIIKEGLESDVFVRSALID 202
Query: 124 GYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP 183
+ K+GE E A S+ M +A I +N ++GG + R + A E+ M+ GF+
Sbjct: 203 VFAKLGEPEDALSVFDEMVTGDA----IVWNSIIGGFAQNSRSDVALELFKRMKRAGFIA 258
Query: 184 --GGFSRIVFDDDSACSNGNGSLRANVAARIDERTY-------SALLNGFCRVGRIEKAK 234
+ ++ AC+ G L + A + Y +AL++ +C+ G +E A
Sbjct: 259 EQATLTSVL----RACT-GLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDAL 313
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
V ++ E V I+++ +++ GY ++A++ E+M+ G KP+Y+T ++
Sbjct: 314 RVFNQMKERDV----ITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFAC 369
Query: 295 CETGEVDQAERWVKKMLE-KGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPN 353
G ++ + + M + GI P E Y +I+ G+ ++L E+E +P+
Sbjct: 370 SHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEME---CEPD 426
Query: 354 VISYGSLINCLCKDRKLLDAE 374
+++ +L+ R ++ AE
Sbjct: 427 AVTWRTLLGACRVQRNMVLAE 447
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 169/387 (43%), Gaps = 59/387 (15%)
Query: 12 SVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCM 71
S N L V K+ + F M +R DVVS+ + +D+ +L
Sbjct: 221 SWNCLLGGFVKKKKIVEARQFFDSM---NVR-DVVSWNTIITGYAQSGKIDEARQLF--- 273
Query: 72 EKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVP------------------ 113
E VF + ++ G + R V++AR+LFD+M RN V
Sbjct: 274 -DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAK 332
Query: 114 ---------NTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSG 164
N T+NT+I GY + G++ +A +L +M P +P +++ ++ G SG
Sbjct: 333 ELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKM--PKRDP--VSWAAMIAGYSQSG 388
Query: 165 RVNDAREVLVEMEGNGFLPGGFSRIVFDDD-SACSNGNG-SLRANVAARIDERTY----- 217
+A + V+ME G G +R F S C++ L + R+ + Y
Sbjct: 389 HSFEALRLFVQMEREG---GRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCF 445
Query: 218 --SALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQM 275
+ALL +C+ G IE+A ++ ++ +V S+N ++ Y G+ E A++ E M
Sbjct: 446 VGNALLLMYCKCGSIEEANDLFKEMAGKDIV----SWNTMIAGYSRHGFGEVALRFFESM 501
Query: 276 EERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK-GIAPTLETYNSLINGYGRISN 334
+ GLKP T +++ TG VD+ ++ M + G+ P + Y +++ GR
Sbjct: 502 KREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGL 561
Query: 335 FVKCFEILEEIEKKGMKPNVISYGSLI 361
+++ + +P+ +G+L+
Sbjct: 562 LEDAHNLMKNMP---FEPDAAIWGTLL 585
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 153/348 (43%), Gaps = 80/348 (22%)
Query: 73 KERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEME 132
K R ++ +N +LGG K +++ +AR+ FD M R++ V++NT+I GY + G+++
Sbjct: 212 KSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDV----VSWNTIITGYAQSGKID 267
Query: 133 KAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEM------EGNGFLPG-- 184
+A L ++P + V T+ ++ G + V +ARE+ +M N L G
Sbjct: 268 EARQLFD--ESPVQD--VFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYV 323
Query: 185 -----GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAK 239
++ +F D C N + T++ ++ G+ + G+I +AK + K
Sbjct: 324 QGERMEMAKELF-DVMPCRNVS--------------TWNTMITGYAQCGKISEAKNLFDK 368
Query: 240 LVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTF------------ 287
+ + +S+ ++ Y G+ +A++ QME G + + +F
Sbjct: 369 MPKR----DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVA 424
Query: 288 -----------------------NTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNS 324
N L+ +C+ G +++A K+M K I ++N+
Sbjct: 425 LELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIV----SWNT 480
Query: 325 LINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLD 372
+I GY R E ++++G+KP+ + ++++ C L+D
Sbjct: 481 MIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSA-CSHTGLVD 527
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
FEL + E + +N+++ G + R + AR+LF+ M R++ ++NT++ G
Sbjct: 111 FELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDV----CSWNTMLSG 166
Query: 125 YCKVGEMEKAFSLKARMKAPN---------------------------AEPSVITYNCLL 157
Y + G ++ A S+ RM N +++++NCLL
Sbjct: 167 YAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLL 226
Query: 158 GGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARI----- 212
GG ++ +AR+ M R V ++ + S + + A ++
Sbjct: 227 GGFVKKKKIVEARQFFDSMN---------VRDVVSWNTIITGYAQSGKIDEARQLFDESP 277
Query: 213 --DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQ 270
D T++A+++G+ + +E+A+E+ K+ E +++S+N ++ Y +E A +
Sbjct: 278 VQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKE 333
Query: 271 TAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYG 330
+ M R + T+NT+I + + G++ +A+ KM ++ P ++ ++I GY
Sbjct: 334 LFDVMPCRNVS----TWNTMITGYAQCGKISEAKNLFDKMPKRD--PV--SWAAMIAGYS 385
Query: 331 RISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKD 367
+ + + + ++E++G + N S+ S ++ C D
Sbjct: 386 QSGHSFEALRLFVQMEREGGRLNRSSFSSALST-CAD 421
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 134/279 (48%), Gaps = 57/279 (20%)
Query: 83 YNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMK 142
YN ++ G + + ARKLFDEM R+L V++N +I GY + + KA L M
Sbjct: 98 YNGMISGYLRNGEFELARKLFDEMPERDL----VSWNVMIKGYVRNRNLGKARELFEIM- 152
Query: 143 APNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNG 202
E V ++N +L G +G V+DAR V F R+ +D
Sbjct: 153 ---PERDVCSWNTMLSGYAQNGCVDDARSV-------------FDRMPEKNDV------- 189
Query: 203 SLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHE 262
+++ALL+ + + ++E+A +L K EN + +S+N L+ + +
Sbjct: 190 -------------SWNALLSAYVQNSKMEEAC-MLFKSRENWAL---VSWNCLLGGFVKK 232
Query: 263 GYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETY 322
+ +A Q + M R + V++NT+I + ++G++D+A +++ ++ + T+
Sbjct: 233 KKIVEARQFFDSMNVRDV----VSWNTIITGYAQSGKIDEA----RQLFDESPVQDVFTW 284
Query: 323 NSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
++++GY I N + E E+ K + N +S+ +++
Sbjct: 285 TAMVSGY--IQN--RMVEEARELFDKMPERNEVSWNAML 319
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 79/132 (59%)
Query: 216 TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQM 275
TY+++++GFC+ R++ AK +L + G P ++++ L+N YC V+ ++ +M
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 71
Query: 276 EERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNF 335
RG+ + VT+ TLI+ FC+ G++D A+ + +M+ G+AP T++ ++ G
Sbjct: 72 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 131
Query: 336 VKCFEILEEIEK 347
K F ILE+++K
Sbjct: 132 RKAFAILEDLQK 143
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 76/142 (53%)
Query: 36 MVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRR 95
M+ I P ++Y ++ +D ++ M + P V ++ ++ G CK +R
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 96 VKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNC 155
V + ++F EM R +V NTVTY TLI G+C+VG+++ A L M + P IT++C
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 156 LLGGLCSSGRVNDAREVLVEME 177
+L GLCS + A +L +++
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQ 142
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 87/172 (50%), Gaps = 29/172 (16%)
Query: 106 MLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGR 165
ML ++ P T+TYN++IDG+CK ++ A + M + P V+T++ L+ G C + R
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 166 VNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFC 225
V++ E+ EM G + AN TY+ L++GFC
Sbjct: 61 VDNGMEIFCEMHRRGIV-----------------------ANTV------TYTTLIHGFC 91
Query: 226 RVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEE 277
+VG ++ A+++L +++ GV P I+++ ++ C + + KA E +++
Sbjct: 92 QVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 143
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 77/141 (54%)
Query: 240 LVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGE 299
++ + P+ I+YN +++ +C + V+ A + + M +G P VTF+TLIN +C+
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 300 VDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGS 359
VD +M +GI TY +LI+G+ ++ + ++L E+ G+ P+ I++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 360 LINCLCKDRKLLDAEIVLGDM 380
++ LC ++L A +L D+
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 29/156 (18%)
Query: 148 PSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRAN 207
P+ ITYN ++ G C RV+DA+ +L M G P
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSP------------------------ 43
Query: 208 VAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEK 267
D T+S L+NG+C+ R++ E+ ++ G+V + ++Y L++ +C G ++
Sbjct: 44 -----DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDA 98
Query: 268 AIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQA 303
A +M G+ P Y+TF+ ++ C E+ +A
Sbjct: 99 AQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKA 134
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%)
Query: 71 MEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGE 130
M + + P+ YN ++ G CK RV DA+++ D M + P+ VT++TLI+GYCK
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 131 MEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP 183
++ + M + +TY L+ G C G ++ A+++L EM G P
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAP 113
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 62/103 (60%)
Query: 282 PSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEI 341
P+ +T+N++I+ FC+ VD A+R + M KG +P + T+++LINGY + EI
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 342 LEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
E+ ++G+ N ++Y +LI+ C+ L A+ +L +M S G
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCG 110
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 64/137 (46%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + + P+ + N + + + + + M G PDVV++ + K
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+D G E+ M + + + Y ++ G C+V + A+ L +EM+ + P+ +T++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 121 LIDGYCKVGEMEKAFSL 137
++ G C E+ KAF++
Sbjct: 121 MLAGLCSKKELRKAFAI 137
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%)
Query: 310 MLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRK 369
ML I PT TYNS+I+G+ + +L+ + KG P+V+++ +LIN CK ++
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 370 LLDAEIVLGDMASRG 384
+ + + +M RG
Sbjct: 61 VDNGMEIFCEMHRRG 75
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 156/346 (45%), Gaps = 45/346 (13%)
Query: 19 TLVGSK-QFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFE-LMGCMEK--- 73
+++G K Q + +F++M SG RPD Y + A + +D K E + G ++K
Sbjct: 141 SVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKG 200
Query: 74 -ERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEME 132
ER P+V YN++L + +V LF ++ + P+ T+N ++D Y K G ++
Sbjct: 201 IERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIK 260
Query: 133 KAFSLKARMKAPNAEPSVITYNCLL---GGLCSSGRVNDAREVLVEMEGNGFLPGGFSRI 189
+ ++ RM++ +P +IT+N L+ G ++ + L+ + LP
Sbjct: 261 EMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLP------ 314
Query: 190 VFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQ 249
T+++++ + + I+KA+ V K+ + +PS
Sbjct: 315 --------------------------TFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSF 348
Query: 250 ISYNILVNAYCHEGYVEKAIQTAEQMEE--RGLKPSYVTFNTLINKFCETGEVDQAERWV 307
I+Y ++ Y + G V +A + E++ E R LK S T N ++ +C G +A++
Sbjct: 349 ITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKAS--TLNAMLEVYCRNGLYIEADKLF 406
Query: 308 KKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPN 353
+ P TY L Y + + +++++EK G+ PN
Sbjct: 407 HNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 130/344 (37%), Gaps = 45/344 (13%)
Query: 1 MRKDGVLPSVRSVNRL----FETLVGSKQFEKVLAVFTDMVESGI---RPDVVSYGKAVE 53
M+ G P N L T +K EKV M GI +P+VV+Y +
Sbjct: 159 MKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKM--KGIERCQPNVVTYNILLR 216
Query: 54 AAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVP 113
A +D+ L ++ V P V+ +N V+ K +K+ + M P
Sbjct: 217 AFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKP 276
Query: 114 NTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVL 173
+ +T+N LID Y K E EK + +P++ T+N ++ + ++ A V
Sbjct: 277 DIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVF 336
Query: 174 VEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKA 233
+M ++P TY ++ + G + +A
Sbjct: 337 KKMNDMNYIPSFI-----------------------------TYECMIMMYGYCGSVSRA 367
Query: 234 KEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINK 293
+E+ ++ E+ V + N ++ YC G +A + + P T+ L
Sbjct: 368 REIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKA 427
Query: 294 FCETGEVDQAERWVKKMLEKGIAP-------TLETYNSLINGYG 330
+ + +Q + +KKM + GI P LE + S + G G
Sbjct: 428 YTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFGSRLPGSG 471
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 142/335 (42%), Gaps = 18/335 (5%)
Query: 65 FELMGCMEKERVG-PSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLID 123
E+ M+K+R P VY+ ++ + K + + A LF EM + P+ YN LI
Sbjct: 117 LEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALIT 176
Query: 124 GYC----KVGEMEKAFSLKARMKA-PNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEG 178
+ K +EK +MK +P+V+TYN LL SG+V+ + +++
Sbjct: 177 AHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDM 236
Query: 179 NGFLPGGFSRIVFDDDSACSNGNGSLRANVAA---------RIDERTYSALLNGFCRVGR 229
+ P ++ F+ NG ++ A + D T++ L++ + +
Sbjct: 237 SPVSPDVYT---FNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQE 293
Query: 230 IEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNT 289
EK ++ L+ + P+ ++N ++ Y ++KA ++M + PS++T+
Sbjct: 294 FEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYEC 353
Query: 290 LINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKG 349
+I + G V +A +++ E T N+++ Y R +++ ++
Sbjct: 354 MIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFR 413
Query: 350 MKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ P+ +Y L K +I++ M G
Sbjct: 414 VHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDG 448
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 156/346 (45%), Gaps = 45/346 (13%)
Query: 19 TLVGSK-QFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFE-LMGCMEK--- 73
+++G K Q + +F++M SG RPD Y + A + +D K E + G ++K
Sbjct: 141 SVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKG 200
Query: 74 -ERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEME 132
ER P+V YN++L + +V LF ++ + P+ T+N ++D Y K G ++
Sbjct: 201 IERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIK 260
Query: 133 KAFSLKARMKAPNAEPSVITYNCLL---GGLCSSGRVNDAREVLVEMEGNGFLPGGFSRI 189
+ ++ RM++ +P +IT+N L+ G ++ + L+ + LP
Sbjct: 261 EMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLP------ 314
Query: 190 VFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQ 249
T+++++ + + I+KA+ V K+ + +PS
Sbjct: 315 --------------------------TFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSF 348
Query: 250 ISYNILVNAYCHEGYVEKAIQTAEQMEE--RGLKPSYVTFNTLINKFCETGEVDQAERWV 307
I+Y ++ Y + G V +A + E++ E R LK S T N ++ +C G +A++
Sbjct: 349 ITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKAS--TLNAMLEVYCRNGLYIEADKLF 406
Query: 308 KKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPN 353
+ P TY L Y + + +++++EK G+ PN
Sbjct: 407 HNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 146/324 (45%), Gaps = 35/324 (10%)
Query: 65 FELMGCMEKERVG-PSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLID 123
E+ M+K+R P VY+ ++ + K + + A LF EM + P+ YN LI
Sbjct: 117 LEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALIT 176
Query: 124 GYC----KVGEMEKAFSLKARMKA-PNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEG 178
+ K +EK +MK +P+V+TYN LL SG+V+ + +++
Sbjct: 177 AHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDM 236
Query: 179 NGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLA 238
+ P D T++ +++ + + G I++ + VL
Sbjct: 237 SPVSP-----------------------------DVYTFNGVMDAYGKNGMIKEMEAVLT 267
Query: 239 KLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETG 298
++ N P I++N+L+++Y + EK QT + + KP+ TFN++I + +
Sbjct: 268 RMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKAR 327
Query: 299 EVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYG 358
+D+AE KKM + P+ TY +I YG + + EI EE+ + +
Sbjct: 328 MIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLN 387
Query: 359 SLINCLCKDRKLLDAEIVLGDMAS 382
+++ C++ ++A+ + + ++
Sbjct: 388 AMLEVYCRNGLYIEADKLFHNASA 411
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 130/344 (37%), Gaps = 45/344 (13%)
Query: 1 MRKDGVLPSVRSVNRL----FETLVGSKQFEKVLAVFTDMVESGI---RPDVVSYGKAVE 53
M+ G P N L T +K EKV M GI +P+VV+Y +
Sbjct: 159 MKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKM--KGIERCQPNVVTYNILLR 216
Query: 54 AAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVP 113
A +D+ L ++ V P V+ +N V+ K +K+ + M P
Sbjct: 217 AFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKP 276
Query: 114 NTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVL 173
+ +T+N LID Y K E EK + +P++ T+N ++ + ++ A V
Sbjct: 277 DIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVF 336
Query: 174 VEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKA 233
+M ++P TY ++ + G + +A
Sbjct: 337 KKMNDMNYIPSFI-----------------------------TYECMIMMYGYCGSVSRA 367
Query: 234 KEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINK 293
+E+ ++ E+ V + N ++ YC G +A + + P T+ L
Sbjct: 368 REIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKA 427
Query: 294 FCETGEVDQAERWVKKMLEKGIAP-------TLETYNSLINGYG 330
+ + +Q + +KKM + GI P LE + S + G G
Sbjct: 428 YTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFGSRLPGSG 471
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 153/371 (41%), Gaps = 38/371 (10%)
Query: 14 NRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEK 73
N L + ++ FE+V+A + MV GIRPD +Y ++A D+ G + G +E
Sbjct: 113 NVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEV 172
Query: 74 ERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEK 133
S++V N ++ + R + AR+LFD M R + V++N +I+ Y G +
Sbjct: 173 SSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFER----DAVSWNAVINCYASEGMWSE 228
Query: 134 AFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDD 193
AF L +M E SVIT+N + GG +G A ++ M
Sbjct: 229 AFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMR---------------- 272
Query: 194 DSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYN 253
N +D L +G I KE+ + + N
Sbjct: 273 -------------NFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRN 319
Query: 254 ILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK 313
L+ Y + A+ Q EE L T+N++I+ + + + ++A +++ML
Sbjct: 320 TLITMYSKCKDLRHALIVFRQTEENSL----CTWNSIISGYAQLNKSEEASHLLREMLVA 375
Query: 314 GIAPTLETYNSLINGYGRISNFVKCFEILEEI-EKKGMKPNVISYGSLINCLCKDRKLLD 372
G P T S++ RI+N E I +K K + + SL++ K K++
Sbjct: 376 GFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVA 435
Query: 373 AEIVLGDMASR 383
A+ V M+ R
Sbjct: 436 AKQVSDLMSKR 446
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 113/252 (44%), Gaps = 19/252 (7%)
Query: 119 NTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEG 178
NTLI Y K ++ A + + + E S+ T+N ++ G + +A +L EM
Sbjct: 319 NTLITMYSKCKDLRHALIVFRQTE----ENSLCTWNSIISGYAQLNKSEEASHLLREMLV 374
Query: 179 NGFLPGGF---SRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNG----FCRVGRIE 231
GF P S + A + R + Y+ L N + + G+I
Sbjct: 375 AGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIV 434
Query: 232 KAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLI 291
AK+V + + +++Y L++ Y ++G A+ ++M G+KP +VT ++
Sbjct: 435 AAKQVSDLMSKR----DEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVL 490
Query: 292 NKFCETGEVDQAERWVKKM-LEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGM 350
+ + V + ER KM E GI P L+ ++ +++ YGR K +I+ +
Sbjct: 491 SACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMP---Y 547
Query: 351 KPNVISYGSLIN 362
KP+ ++ +L+N
Sbjct: 548 KPSGATWATLLN 559
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 180/414 (43%), Gaps = 54/414 (13%)
Query: 6 VLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGF 65
P+V VN +F+ VL ++ GI PD S+ +++A G
Sbjct: 67 TFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRF-----GI 121
Query: 66 ELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHR---------------- 109
+EK +V N+++ K V+ ARK+FD++ R
Sbjct: 122 LFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWG 181
Query: 110 ---------NLVP--NTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLG 158
+++P + V++ +I G+ KV ++E A RM E SV+++N +L
Sbjct: 182 NKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRM----PEKSVVSWNAMLS 237
Query: 159 GLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACS-NGNGSLRANVAARIDER-- 215
G +G DA + +M G P + ++ SACS + SL ++ IDE+
Sbjct: 238 GYAQNGFTEDALRLFNDMLRLGVRPNETTWVIV--ISACSFRADPSLTRSLVKLIDEKRV 295
Query: 216 -----TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQ 270
+ALL+ + I+ A+ + +L G + +++N +++ Y G + A Q
Sbjct: 296 RLNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSSARQ 352
Query: 271 TAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIA-PTLETYNSLINGY 329
+ M +R + V++N+LI + G+ A + + M++ G + P T S+++
Sbjct: 353 LFDTMPKRNV----VSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSAC 408
Query: 330 GRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
G +++ I++ I K +K N Y SLI + L +A+ V +M R
Sbjct: 409 GHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER 462
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 79/166 (47%), Gaps = 5/166 (3%)
Query: 9 SVRSVNRLFETLVGSKQFEKVLAVFTDMVESG-IRPDVVSYGKAVEAAVMLKDLDKGFEL 67
+V S N L + Q + F DM++ G +PD V+ + A + DL+ G +
Sbjct: 361 NVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCI 420
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
+ + K ++ + Y ++ + + +A+++FDEM R++V +YNTL +
Sbjct: 421 VDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVV----SYNTLFTAFAA 476
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVL 173
G+ + +L ++MK EP +TY +L +G + + + +
Sbjct: 477 NGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIF 522
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 164/353 (46%), Gaps = 39/353 (11%)
Query: 28 KVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMG-CMEKERVGPSVFVYNLV 86
+ L VF M+ES + PD V+ + A L + G E+ G ++ +++ + + N
Sbjct: 236 EALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAF 295
Query: 87 LGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNA 146
+ K R+K+AR +FD M RN++ T ++I GY + A + +M A
Sbjct: 296 VDMYAKCSRIKEARFIFDSMPIRNVIAET----SMISGYAMAASTKAARLMFTKM----A 347
Query: 147 EPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG--GFSRIVFDDDSACSNGNGSL 204
E +V+++N L+ G +G +A + ++ P F+ I+ AC++ L
Sbjct: 348 ERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANIL----KACADL-AEL 402
Query: 205 RANVAARIDERTY---------------SALLNGFCRVGRIEKAKEVLAKLVENGVVPSQ 249
+ A + + ++L++ + + G +E+ V K++E V
Sbjct: 403 HLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCV--- 459
Query: 250 ISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKK 309
S+N ++ + GY +A++ +M E G KP ++T +++ G V++ +
Sbjct: 460 -SWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSS 518
Query: 310 MLEK-GIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
M G+AP + Y +++ GR + F++ E IE+ M+P+ + +GSL+
Sbjct: 519 MTRDFGVAPLRDHYTCMVDLLGR-AGFLE--EAKSMIEEMPMQPDSVIWGSLL 568
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 160/385 (41%), Gaps = 48/385 (12%)
Query: 12 SVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCM 71
+ N + + E+ L F M + G + S+ + A L D++KG ++ +
Sbjct: 119 TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLI 178
Query: 72 EKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEM 131
K V++ + ++ K V DA+++FDEM RN+ V++N+LI + + G
Sbjct: 179 AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNV----VSWNSLITCFEQNGPA 234
Query: 132 EKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG------FLPGG 185
+A + M EP +T ++ S + +EV + N L
Sbjct: 235 VEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNA 294
Query: 186 F------------SRIVFDD--------DSACSNGNGSLRANVAARI-----DER---TY 217
F +R +FD +++ +G + AAR+ ER ++
Sbjct: 295 FVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSW 354
Query: 218 SALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEE 277
+AL+ G+ + G E+A + L V P+ S+ ++ A + +Q + +
Sbjct: 355 NALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLK 414
Query: 278 RGLK------PSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGR 331
G K N+LI+ + + G V++ +KM+E+ ++N++I G+ +
Sbjct: 415 HGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCV----SWNAMIIGFAQ 470
Query: 332 ISNFVKCFEILEEIEKKGMKPNVIS 356
+ E+ E+ + G KP+ I+
Sbjct: 471 NGYGNEALELFREMLESGEKPDHIT 495
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 133/316 (42%), Gaps = 33/316 (10%)
Query: 80 VFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKA 139
+F+ N ++ K ++D R++FD+M RN+ T+N+++ G K+G +++A SL
Sbjct: 55 IFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNI----YTWNSVVTGLTKLGFLDEADSLFR 110
Query: 140 RMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG--GFSRIVFDDDSAC 197
M E T+N ++ G R +A M GF+ F+ ++ SAC
Sbjct: 111 SM----PERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL----SAC 162
Query: 198 SNGN--------GSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQ 249
S N SL A D SAL++ + + G + A+ V ++ + VV
Sbjct: 163 SGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV--- 219
Query: 250 ISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKK 309
S+N L+ + G +A+ + M E ++P VT ++I+ + V +
Sbjct: 220 -SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIK-----VGQ 273
Query: 310 MLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKP--NVISYGSLINCLCKD 367
+ + + N +I + + KC I E P NVI+ S+I+
Sbjct: 274 EVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMA 333
Query: 368 RKLLDAEIVLGDMASR 383
A ++ MA R
Sbjct: 334 ASTKAARLMFTKMAER 349
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 154/341 (45%), Gaps = 30/341 (8%)
Query: 46 VSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDE 105
VS+ + + +LD +L M + V +YN ++ G K + AR+LFDE
Sbjct: 145 VSWTALISGYIRCGELDLASKLFDQMPHVK---DVVIYNAMMDGFVKSGDMTSARRLFDE 201
Query: 106 MLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGR 165
M H+ ++ T+ T+I GYC + +++ A L M E +++++N ++GG C + +
Sbjct: 202 MTHKTVI----TWTTMIHGYCNIKDIDAARKLFDAM----PERNLVSWNTMIGGYCQNKQ 253
Query: 166 VNDAREVLVEMEGNGFLPGGFSRIV-----FDDDSACSNGNGSLRANVAARIDERTY--S 218
+ + EM+ L I+ D A S G ++D++ +
Sbjct: 254 PQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCT 313
Query: 219 ALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQM--E 276
A+L+ + + G IEKAK + ++ E V S+N +++ Y G A+ M E
Sbjct: 314 AILDMYSKCGEIEKAKRIFDEMPEKQVA----SWNAMIHGYALNGNARAALDLFVTMMIE 369
Query: 277 ERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFV 336
E KP +T +I G V++ +W M E G+ +E Y +++ GR +
Sbjct: 370 E---KPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLK 426
Query: 337 KCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVL 377
+ +++ + +PN I S ++ + + + AE +L
Sbjct: 427 EAEDLITNMP---FEPNGIILSSFLSACGQYKDIERAERIL 464
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 155/353 (43%), Gaps = 49/353 (13%)
Query: 14 NRLFETLVGSKQFEKVLAVFTDM-VESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCME 72
N + + + ++Q+ A++ D+ E+ PD ++ ++ + + +G +L +
Sbjct: 46 NSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIW 105
Query: 73 KERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEME 132
+ ++V V+ K ++ AR FDEM HR + V++ LI GY + GE++
Sbjct: 106 RFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHR----SEVSWTALISGYIRCGELD 161
Query: 133 KAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFD 192
A L +M P+ + V+ YN ++ G SG + AR + EM +
Sbjct: 162 LASKLFDQM--PHVK-DVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVI---------- 208
Query: 193 DDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISY 252
T++ +++G+C + I+ A+++ + E +V S+
Sbjct: 209 -----------------------TWTTMIHGYCNIKDIDAARKLFDAMPERNLV----SW 241
Query: 253 NILVNAYCHEGYVEKAIQTAEQME-ERGLKPSYVTFNTLINKFCETGEVDQAERWVKKML 311
N ++ YC ++ I+ ++M+ L P VT +++ +TG + E W +
Sbjct: 242 NTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGE-WCHCFV 300
Query: 312 E-KGIAPTLETYNSLINGYGRISNFVKCFEILEEI-EKKGMKPNVISYGSLIN 362
+ K + ++ ++++ Y + K I +E+ EK+ N + +G +N
Sbjct: 301 QRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALN 353
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 143/327 (43%), Gaps = 45/327 (13%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFE- 66
P++ LF ++ + + L +++S YG + ++ D K F+
Sbjct: 63 PNLSDAKSLFNSIAATSRIPLDLKFHNSVLQS--------YG----SIAVVNDTVKLFQH 110
Query: 67 LMGCMEKERVGPSVFVYNLVLGGLCKV--RRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
++ R G S F+ ++L C+ + + ++ + M++ L P+ VT + +
Sbjct: 111 ILKSQPNFRPGRSTFL--ILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRS 168
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
C+ G +++A L + ++ P TYN LL LC ++ E + EM
Sbjct: 169 LCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEM-------- 220
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
R + + D +++ L++ C + +A +++KL G
Sbjct: 221 --------------------RDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAG 260
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
P YN ++ +C +A+ ++M+E G++P +T+NTLI + G V++A
Sbjct: 261 FKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEAR 320
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGR 331
++K M++ G P TY SL+NG R
Sbjct: 321 MYLKTMVDAGYEPDTATYTSLMNGMCR 347
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 126/292 (43%), Gaps = 40/292 (13%)
Query: 83 YNLVLGGLCKVRRVKDARKLFDEML--HRNLVPNTVTYNTLIDGYCK-----VGEMEKAF 135
+N VL + V D KLF +L N P T+ L+ C+ + + +
Sbjct: 88 HNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVL 147
Query: 136 SLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDS 195
+L M EP +T + + LC +GRV++A++++ E+ P
Sbjct: 148 NL---MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPP------------ 192
Query: 196 ACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVEN-GVVPSQISYNI 254
D TY+ LL C+ + E + ++ ++ V P +S+ I
Sbjct: 193 -----------------DTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTI 235
Query: 255 LVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKG 314
L++ C+ + +A+ ++ G KP +NT++ FC + +A KKM E+G
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 315 IAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCK 366
+ P TYN+LI G + + L+ + G +P+ +Y SL+N +C+
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 30/222 (13%)
Query: 78 PSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSL 137
P ++ + LC+ RV +A+ L E+ ++ P+T TYN L+ CK ++ +
Sbjct: 157 PDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEF 216
Query: 138 KARMKAP-NAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSA 196
M+ + +P ++++ L+ +C+S + +A ++ ++ GF P F
Sbjct: 217 VDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCF---------- 266
Query: 197 CSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILV 256
Y+ ++ GFC + + +A V K+ E GV P QI+YN L+
Sbjct: 267 -------------------LYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLI 307
Query: 257 NAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETG 298
G VE+A + M + G +P T+ +L+N C G
Sbjct: 308 FGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 130/299 (43%), Gaps = 35/299 (11%)
Query: 92 KVRRVKDARKLFDEMLHRNLVPNTVTY-NTLIDGYCKVGEMEKAFSLKARM--KAPNAEP 148
K + DA+ LF+ + + +P + + N+++ Y + + L + PN P
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 149 SVITYNCLLGGLCSS--GRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRA 206
T+ LL C + +++ VL M NG P
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEP----------------------- 157
Query: 207 NVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVE 266
D+ T + C GR+++AK+++ +L E P +YN L+ C +
Sbjct: 158 ------DQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLH 211
Query: 267 KAIQTAEQM-EERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSL 325
+ ++M ++ +KP V+F LI+ C + + +A V K+ G P YN++
Sbjct: 212 VVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTI 271
Query: 326 INGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ G+ +S + + ++++++G++P+ I+Y +LI L K ++ +A + L M G
Sbjct: 272 MKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAG 330
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 101/229 (44%), Gaps = 30/229 (13%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M +G+ P + + +L + + ++ + ++ E PD +Y ++ KD
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 61 LDKGFELMGCMEKE-RVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYN 119
L +E + M + V P + + +++ +C + +++A L ++ + P+ YN
Sbjct: 210 LHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYN 269
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN 179
T++ G+C + + +A + +MK EP ITYN L+ GL +GRV +AR L M
Sbjct: 270 TIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDA 329
Query: 180 GFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVG 228
G+ P D TY++L+NG CR G
Sbjct: 330 GYEP-----------------------------DTATYTSLMNGMCRKG 349
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 157/365 (43%), Gaps = 26/365 (7%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P N + S+ EK ++V+ M+ G+ PD ++Y ++++ L + G L
Sbjct: 71 PPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSL 130
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
+ K + +F+ N ++ R ARKLFDEM H+NL VT+N+++D Y K
Sbjct: 131 HCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNL----VTWNSILDAYAK 186
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
G++ A + M +E V+T++ ++ G G N A E+ +M G
Sbjct: 187 SGDVVSARLVFDEM----SERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEV 242
Query: 188 RIVFDDDSACSNGNGSLRANVAARIDERTY--------SALLNGFCRVGRIEKAKEVL-- 237
+V AC++ R R + ++L++ + + G I A V
Sbjct: 243 TMV-SVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYR 301
Query: 238 AKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCET 297
A + E + +N ++ G++ +++Q +M E + P +TF L+
Sbjct: 302 ASVKETDA----LMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHG 357
Query: 298 GEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISY 357
G V +A + K + E G P E Y +++ R + + E+ +KP
Sbjct: 358 GLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMP---IKPTGSML 414
Query: 358 GSLIN 362
G+L+N
Sbjct: 415 GALLN 419
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 113/250 (45%), Gaps = 38/250 (15%)
Query: 71 MEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGE 130
M+ E V +F Y++ + +CK + A KL+ EM R + + V YNT+I
Sbjct: 215 MDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQG 274
Query: 131 MEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIV 190
+E + M+ EP+V T+N ++ LC GR+ DA +L EM G P
Sbjct: 275 VEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQP------- 327
Query: 191 FDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLA---KLVENGVVP 247
D TY C R+EK E+L+ +++ +GV P
Sbjct: 328 ----------------------DSITY------MCLFSRLEKPSEILSLFGRMIRSGVRP 359
Query: 248 SQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWV 307
+Y +L+ + G+++ + + M+E G P +N +I+ + G +D A +
Sbjct: 360 KMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYE 419
Query: 308 KKMLEKGIAP 317
++M+E+G++P
Sbjct: 420 EEMIERGLSP 429
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 136/314 (43%), Gaps = 29/314 (9%)
Query: 60 DLDKGFELMGCMEKER-VGPSVFVYNLVLGGLCKVRRVKDARKLFDEML-HRNLVPNTVT 117
D K E +E+E + +N V+ L K + + L + M+ + VPN VT
Sbjct: 60 DWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVT 119
Query: 118 YNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEME 177
+ + Y +++A ++ N YN L+ LC V +A E+
Sbjct: 120 FRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYN-LVDALCEHKHVVEAEELCF--- 175
Query: 178 GNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVL 237
G + GFS SN + ++ +L G+ ++G K KE
Sbjct: 176 GKNVIGNGFS---------VSNT--------------KIHNLILRGWSKLGWWGKCKEYW 212
Query: 238 AKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCET 297
K+ GV SY+I ++ C G KA++ ++M+ R +K V +NT+I +
Sbjct: 213 KKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGAS 272
Query: 298 GEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISY 357
V+ R ++M E+G P + T+N++I + +L+E+ K+G +P+ I+Y
Sbjct: 273 QGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITY 332
Query: 358 GSLINCLCKDRKLL 371
L + L K ++L
Sbjct: 333 MCLFSRLEKPSEIL 346
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 144/354 (40%), Gaps = 46/354 (12%)
Query: 7 LPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFE 66
+P+ + +F+ V + ++ + + + + +R D S+ V+A K + + E
Sbjct: 114 VPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLR-DETSFYNLVDALCEHKHVVEAEE 172
Query: 67 LMGCMEKERVG-----PSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTL 121
L C K +G + ++NL+L G K+ ++ + +M + + +Y+
Sbjct: 173 L--CFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIY 230
Query: 122 IDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGF 181
+D CK G+ KA L MK+ + V+ YN ++ + +S V V EM G
Sbjct: 231 MDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGC 290
Query: 182 LPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLV 241
P NVA T++ ++ C GR+ A +L ++
Sbjct: 291 EP-----------------------NVA------THNTIIKLLCEDGRMRDAYRMLDEMP 321
Query: 242 ENGVVPSQISYNILVNAYCHEGYVEKAIQTAE---QMEERGLKPSYVTFNTLINKFCETG 298
+ G P I+Y L + +EK + +M G++P T+ L+ KF G
Sbjct: 322 KRGCQPDSITYMCLFSR------LEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWG 375
Query: 299 EVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKP 352
+ K M E G P YN++I+ + E EE+ ++G+ P
Sbjct: 376 FLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 106/249 (42%), Gaps = 32/249 (12%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M +GV + S + + + S + K + ++ +M ++ DVV+Y + A +
Sbjct: 215 MDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQG 274
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
++ G + M + P+V +N ++ LC+ R++DA ++ DEM R P+++TY
Sbjct: 275 VEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMC 334
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L K E+ SL RM P + TY L+ G + V M+ +G
Sbjct: 335 LFSRLEKPSEI---LSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESG 391
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P DSA Y+A+++ + G ++ A+E ++
Sbjct: 392 DTP----------DSA-------------------AYNAVIDALIQKGMLDMAREYEEEM 422
Query: 241 VENGVVPSQ 249
+E G+ P +
Sbjct: 423 IERGLSPRR 431
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 161/370 (43%), Gaps = 75/370 (20%)
Query: 45 VVSYGK--AVEAAVMLKDL-------DKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRR 95
+V YG+ VEAA L D D G E +ER +V +N ++ KV
Sbjct: 242 IVGYGQRGQVEAARCLFDQIPDLCGDDHGGEF-----RERFCKNVVSWNSMIKAYLKVGD 296
Query: 96 VKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNC 155
V AR LFD+M R +T+++NT+IDGY V ME AF+L + M PN + ++N
Sbjct: 297 VVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEM--PNRDAH--SWNM 348
Query: 156 LLGGLCSSGRVNDARE---------------------------------VLVEMEGNGFL 182
++ G S G V AR + + +EG
Sbjct: 349 MVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPD 408
Query: 183 PGGFSRIVFDDDSACSNGNGSLRANVAAR--------IDERTYSALLNGFCRVGRIEKAK 234
P + ++ + S G +LR + D ++AL+ + R G I +++
Sbjct: 409 PHTLTSLL-----SASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESR 463
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
+ ++ V I++N ++ Y G +A+ M+ G+ PS++TF +++N
Sbjct: 464 RIFDEMKLKREV---ITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNAC 520
Query: 295 CETGEVDQAE-RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPN 353
G VD+A+ ++V M I P +E Y+SL+N F + I+ + +P+
Sbjct: 521 AHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMP---FEPD 577
Query: 354 VISYGSLINC 363
+G+L++
Sbjct: 578 KTVWGALLDA 587
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 139/304 (45%), Gaps = 43/304 (14%)
Query: 81 FVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKAR 140
F +N ++ G K RR+ +A LF++M R N V+++ +I G+C+ GE++ A L +
Sbjct: 137 FSWNTMISGYAKNRRIGEALLLFEKMPER----NAVSWSAMITGFCQNGEVDSAVVLFRK 192
Query: 141 MKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVE----MEGNGFLPGGF---------- 186
M ++ P L+ GL + R+++A VL + + G L +
Sbjct: 193 MPVKDSSPLC----ALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQR 248
Query: 187 -----SRIVFDD--DSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAK 239
+R +FD D + G R + ++++++ + +VG + A+ + +
Sbjct: 249 GQVEAARCLFDQIPDLCGDDHGGEFRERFCKNV--VSWNSMIKAYLKVGDVVSARLLFDQ 306
Query: 240 LVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGE 299
+ + IS+N +++ Y H +E A +M R ++N +++ + G
Sbjct: 307 MKDRDT----ISWNTMIDGYVHVSRMEDAFALFSEMPNRDAH----SWNMMVSGYASVGN 358
Query: 300 VDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGS 359
V+ A + +K EK ++NS+I Y + ++ + ++ + +G KP+ + S
Sbjct: 359 VELARHYFEKTPEKHTV----SWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTS 414
Query: 360 LINC 363
L++
Sbjct: 415 LLSA 418
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 134/317 (42%), Gaps = 58/317 (18%)
Query: 80 VFVYNLVLGGLCKVRRVKDARKLFDEM-----------LHRNLVPNTVTYNTLIDGYCKV 128
V+ YN ++ G + +V+ AR LFD++ N V++N++I Y KV
Sbjct: 235 VYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKV 294
Query: 129 GEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSR 188
G++ A L +MK + I++N ++ G R+ DA + EM
Sbjct: 295 GDVVSARLLFDQMK----DRDTISWNTMIDGYVHVSRMEDAFALFSEMPNR--------- 341
Query: 189 IVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPS 248
D +++ +++G+ VG +E A+ K E V
Sbjct: 342 ------------------------DAHSWNMMVSGYASVGNVELARHYFEKTPEKHTV-- 375
Query: 249 QISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVD-QAERWV 307
S+N ++ AY ++A+ +M G KP T +L++ TG V+ + +
Sbjct: 376 --SWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLS--ASTGLVNLRLGMQM 431
Query: 308 KKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKD 367
+++ K + P + +N+LI Y R ++ I +E++ +K VI++ ++I
Sbjct: 432 HQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMK---LKREVITWNAMIGGYAFH 488
Query: 368 RKLLDAEIVLGDMASRG 384
+A + G M S G
Sbjct: 489 GNASEALNLFGSMKSNG 505
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 133/308 (43%), Gaps = 77/308 (25%)
Query: 96 VKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNC 155
+ +AR +F+++ RN TVT+NT+I GY K EM +A L M + V+T+N
Sbjct: 56 IAEARDIFEKLEARN----TVTWNTMISGYVKRREMNQARKLFDVMPKRD----VVTWNT 107
Query: 156 LLGGLCSSGRV---NDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARI 212
++ G S G + +AR++ EM SR F ++ S + R A +
Sbjct: 108 MISGYVSCGGIRFLEEARKLFDEMP---------SRDSFSWNTMISGYAKNRRIGEALLL 158
Query: 213 DER-------TYSALLNGFCRVGRIEKAK---------------EVLAKLVEN------- 243
E+ ++SA++ GFC+ G ++ A ++A L++N
Sbjct: 159 FEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAA 218
Query: 244 ---GVVPSQIS--------YNILVNAYCHEGYVEKAIQTAEQM------------EERGL 280
G S +S YN L+ Y G VE A +Q+ ER
Sbjct: 219 WVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFC 278
Query: 281 KPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFE 340
K + V++N++I + + G+V A +M ++ ++N++I+GY +S F
Sbjct: 279 K-NVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTI----SWNTMIDGYVHVSRMEDAFA 333
Query: 341 ILEEIEKK 348
+ E+ +
Sbjct: 334 LFSEMPNR 341
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 151/335 (45%), Gaps = 35/335 (10%)
Query: 18 ETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD---LDKGFELMGCMEKE 74
E L K F V + +E+ RPD+ S A A V+ LD + +EK
Sbjct: 88 ENLAEKKHFSAVSNLLDGFIEN--RPDLKSERFAAHAIVLYAQANMLDHSLRVFRDLEKF 145
Query: 75 RVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHR-NLVPNTVTYNTLIDGYCKVGEMEK 133
+ +V N +L + K+A++++ EM + P+ TYN +I +C+ G
Sbjct: 146 EISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASS 205
Query: 134 AFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDD 193
++S+ A M+ +P+ ++ ++ G + + ++ +VL M+ G
Sbjct: 206 SYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRG------------- 252
Query: 194 DSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYN 253
I TY+ + C+ + ++AK +L ++ G+ P+ ++Y+
Sbjct: 253 ----------------VNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYS 296
Query: 254 ILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK 313
L++ +C+E E+A + + M RG KP + TLI C+ G+ + A K+ +EK
Sbjct: 297 HLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEK 356
Query: 314 GIAPTLETYNSLINGYGRISNFVKCFEILEEIEKK 348
P+ SL+NG + S + E++ ++++K
Sbjct: 357 NWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 102/238 (42%), Gaps = 29/238 (12%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G+ P + + NR+ + S ++ +M GI+P+ S+G + D+
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
+++ M+ V V YN+ + LCK ++ K+A+ L D ML + PNTVTY+ LI G
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
+C + E+A L M +P Y L+ LC G A + E ++P
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVP- 360
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVE 242
FS +L+NG + ++E+AKE++ ++ E
Sbjct: 361 SFS----------------------------IMKSLVNGLAKDSKVEEAKELIGQVKE 390
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 69/141 (48%)
Query: 244 GVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQA 303
G+ P +YN ++ +C G + +ME +G+KP+ +F +I+ F + D+
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 304 ERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINC 363
+ + M ++G+ + TYN I + + +L+ + GMKPN ++Y LI+
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301
Query: 364 LCKDRKLLDAEIVLGDMASRG 384
C + +A+ + M +RG
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRG 322
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 152/341 (44%), Gaps = 43/341 (12%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVES-GIRPDVVSYGKAVEAAVMLKDLDKGFE 66
P V + + +E+ L +F M G+ PD ++G + A L+ L +G E
Sbjct: 227 PDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKE 286
Query: 67 LMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYC 126
+ G + +G +V V + +L K V++AR++F+ M +N +V+++ L+ GYC
Sbjct: 287 IHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKN----SVSWSALLGGYC 342
Query: 127 KVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGF 186
+ GE EKA + M+ E + + +L V +E+ G G F
Sbjct: 343 QNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEI----HGQYVRRGCF 394
Query: 187 SRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVV 246
++ + SAL++ + + G I+ A V +K+ +
Sbjct: 395 GNVIVE-------------------------SALIDLYGKSGCIDSASRVYSKMS----I 425
Query: 247 PSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERW 306
+ I++N +++A G E+A+ M ++G+KP Y++F ++ TG VD+ +
Sbjct: 426 RNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNY 485
Query: 307 VKKMLEK-GIAPTLETYNSLINGYGRISNFVKCFEILEEIE 346
M + GI P E Y+ +I+ GR F + +LE E
Sbjct: 486 FVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAE 526
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 160/369 (43%), Gaps = 26/369 (7%)
Query: 12 SVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCM 71
S + V K+ K L VF +MV G+ + + AV+A L ++ G G +
Sbjct: 130 SWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVV 189
Query: 72 EKERVGPSVFVYNLVLGGLCKVRRVK-DARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGE 130
+ F+ + L L V R DAR++FDEM P+ + + ++ + K
Sbjct: 190 ITHGFEWNHFISS-TLAYLYGVNREPVDARRVFDEMPE----PDVICWTAVLSAFSKNDL 244
Query: 131 MEKAFSL-KARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRI 189
E+A L A + P T+ +L + R+ +E+ ++ NG S +
Sbjct: 245 YEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGI----GSNV 300
Query: 190 VFDDDSACSNGN-GSLRA-----NVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVEN 243
V + G GS+R N ++ + ++SALL G+C+ G EKA E+ ++ E
Sbjct: 301 VVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK 360
Query: 244 GVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQA 303
+ + ++ A V + Q RG + + + LI+ + ++G +D A
Sbjct: 361 DLY----CFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSA 416
Query: 304 ERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINC 363
R KM + + T+N++++ + + ++ KKG+KP+ IS+ +++
Sbjct: 417 SRVYSKMSIRNMI----TWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTA 472
Query: 364 LCKDRKLLD 372
C ++D
Sbjct: 473 -CGHTGMVD 480
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 157/336 (46%), Gaps = 29/336 (8%)
Query: 22 GSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVF 81
S+ F+++L + GIRP+ ++G + ++ +D+ G +L K + +VF
Sbjct: 77 ASQAFKRLLCL-------GIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVF 129
Query: 82 VYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARM 141
V + VL K+ + DAR+ FD+ PN V+ LI GY K E E+A SL M
Sbjct: 130 VGSAVLNCYVKLSTLTDARRCFDDTRD----PNVVSITNLISGYLKKHEFEEALSLFRAM 185
Query: 142 KAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFL---PGGFSRIVFDDDSACS 198
E SV+T+N ++GG +GR +A V+M G + F + + S
Sbjct: 186 ----PERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIAS 241
Query: 199 NGNG-SLRA----NVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYN 253
+G G S+ A + R + +++L++ + + G +E + KL E + +S+N
Sbjct: 242 HGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQ--RNIVSWN 299
Query: 254 ILVNAYCHEGYVEKAIQTAEQM-EERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLE 312
++ Y H G E+A+ E+M ++ L+P+ VT ++ G + + + K +
Sbjct: 300 SMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVN 359
Query: 313 KGIAPT---LETYNSLINGYGRISNFVKCFEILEEI 345
P LE Y +++ R F + E+++ +
Sbjct: 360 DYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSM 395
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 174/412 (42%), Gaps = 57/412 (13%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P+V N LF+ V + L ++ M+ + P +Y V+A+ G L
Sbjct: 834 PNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRF--GESL 891
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVP-------------- 113
+ K G V + ++ R+++ARK+FDEM R+ +
Sbjct: 892 QAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDM 951
Query: 114 -------------NTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGL 160
N T N LI+GY +G +E+A SL +M + +I++ ++ G
Sbjct: 952 DSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKD----IISWTTMIKGY 1007
Query: 161 CSSGRVNDAREVLVEMEGNGFLPG--GFSRIVFDDDSACSNGNGSLRANVAAR------- 211
+ R +A V +M G +P S ++ SAC++ G L
Sbjct: 1008 SQNKRYREAIAVFYKMMEEGIIPDEVTMSTVI----SACAHL-GVLEIGKEVHMYTLQNG 1062
Query: 212 --IDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAI 269
+D SAL++ + + G +E+A V L + + +N ++ G+ ++A+
Sbjct: 1063 FVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNL----FCWNSIIEGLAAHGFAQEAL 1118
Query: 270 QTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK-GIAPTLETYNSLING 328
+ +ME +KP+ VTF ++ G VD+ R + M++ I +E Y +++
Sbjct: 1119 KMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHL 1178
Query: 329 YGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDM 380
+ + + E++ +E +PN + +G+L++ + L+ AEI +
Sbjct: 1179 FSKAGLIYEALELIGNME---FEPNAVIWGALLDGCRIHKNLVIAEIAFNKL 1227
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 149/348 (42%), Gaps = 31/348 (8%)
Query: 24 KQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVY 83
K E LA M+++ + D + + A K LD M M++ P+VFVY
Sbjct: 787 KLLESALAA---MIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQE----PNVFVY 839
Query: 84 NLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAF--SLKARM 141
N + G + +L+ ML ++ P++ TY++L+ K F SL+A +
Sbjct: 840 NALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLV----KASSFASRFGESLQAHI 895
Query: 142 KAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG----GFSRIVFDDDSAC 197
V L+ ++GR+ +AR+V EM + R V D DSA
Sbjct: 896 WKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSAN 955
Query: 198 SNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVN 257
S AN + +E T + L+NG+ +G +E+A+ + ++ V IS+ ++
Sbjct: 956 S------LANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQM----PVKDIISWTTMIK 1005
Query: 258 AYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAP 317
Y +AI +M E G+ P VT +T+I+ G ++ + L+ G
Sbjct: 1006 GYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVL 1065
Query: 318 TLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLC 365
+ ++L++ Y + + + + + KK N+ + S+I L
Sbjct: 1066 DVYIGSALVDMYSKCGSLERALLVFFNLPKK----NLFCWNSIIEGLA 1109
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 174/410 (42%), Gaps = 53/410 (12%)
Query: 10 VRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMG 69
+R+ L LV SK ++ +++V D+ E PD + + + + D+ F +
Sbjct: 104 LRTTKHLISYLVSSKSWDLLVSVCEDLREHKALPDGQTCSNLIRSCIR----DRKFRITH 159
Query: 70 CME---KERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHR-NLVPNTVTYNTLIDGY 125
C+ + +V + + G K++ ++FD + + P+ Y +++ +
Sbjct: 160 CLLSVFRSDKSLAVSASDAAMKGFNKLQMYSSTIQVFDRLKQSVGVEPSPGCYCRIMEAH 219
Query: 126 CKVGEMEKAFSLKARMKAPN----AEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG- 180
K+GE K L K+ A+ S Y + L SGR +A EVL EM+ G
Sbjct: 220 EKIGENHKVVELFQEFKSQRLSFLAKESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGI 279
Query: 181 --------------------------FLPGGFSRIVFDDDSACS-------NGNGSLRAN 207
F G +++ D + GN
Sbjct: 280 PESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLE 339
Query: 208 VAA-------RIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYC 260
V A ++ + A++NGF + +A +V ++ Q++Y I +NAYC
Sbjct: 340 VVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYC 399
Query: 261 HEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLE 320
KA ++M ++G V ++ +++ + +T + A R + KM ++G P +
Sbjct: 400 RLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIW 459
Query: 321 TYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKL 370
YNSLI+ +GR + + +I +E+++ + P+ +SY S+I+ + ++L
Sbjct: 460 IYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKEL 509
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 168/385 (43%), Gaps = 37/385 (9%)
Query: 24 KQFEKVLAVFTDMVES-GIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVG----P 78
+ + + VF + +S G+ P Y + +EA + + K EL + +R+
Sbjct: 187 QMYSSTIQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKE 246
Query: 79 SVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEM---EKAF 135
S +Y +V L K R +A ++ +EM + + ++ Y+ LI + + E+ EK F
Sbjct: 247 SGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLF 306
Query: 136 SL---KARMKAPNAEPSVITYNCLLGGLCSSGRVNDA-REVLVEMEG-------NGFLPG 184
K +K P V+ G + ++ V A R+ +++ NGF
Sbjct: 307 KEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQ 366
Query: 185 -GFSRIV----FDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAK 239
GF+ V + C G + TY+ +N +CR+ + KA+ + +
Sbjct: 367 RGFAEAVKVYEWAMKEECEAG-------------QVTYAIAINAYCRLEKYNKAEMLFDE 413
Query: 240 LVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGE 299
+V+ G ++Y+ +++ Y + A++ +M++RG KP+ +N+LI+ +
Sbjct: 414 MVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMD 473
Query: 300 VDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGS 359
+ +AE+ K+M + P +Y S+I+ Y R +C E+ +E K + G
Sbjct: 474 LRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGI 533
Query: 360 LINCLCKDRKLLDAEIVLGDMASRG 384
++ K ++ + +L DM G
Sbjct: 534 MVGVFSKTSRIDELMRLLQDMKVEG 558
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/269 (17%), Positives = 112/269 (41%), Gaps = 29/269 (10%)
Query: 60 DLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYN 119
+++ E++ M K + + + ++ G K R +A K+++ + VTY
Sbjct: 333 NMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYA 392
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN 179
I+ YC++ + KA L M + V+ Y+ ++ + R++DA ++ +M+
Sbjct: 393 IAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQR 452
Query: 180 GFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAK 239
G P + Y++L++ R + +A+++ +
Sbjct: 453 GCKPNIW-----------------------------IYNSLIDMHGRAMDLRRAEKIWKE 483
Query: 240 LVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGE 299
+ V+P ++SY +++AY +E+ ++ ++ K ++ F +T
Sbjct: 484 MKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSR 543
Query: 300 VDQAERWVKKMLEKGIAPTLETYNSLING 328
+D+ R ++ M +G Y+S +N
Sbjct: 544 IDELMRLLQDMKVEGTRLDARLYSSALNA 572
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 89/217 (41%), Gaps = 14/217 (6%)
Query: 23 SKQ--FEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSV 80
SKQ F + + V+ ++ V+Y A+ A L+ +K L M K+ V
Sbjct: 364 SKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCV 423
Query: 81 FVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKAR 140
Y+ ++ K RR+ DA +L +M R PN YN+LID + + ++ +A +
Sbjct: 424 VAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKE 483
Query: 141 MKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN---------GFLPGGFSRIVF 191
MK P ++Y ++ S + E+ E N G + G FS+
Sbjct: 484 MKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSR 543
Query: 192 DDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVG 228
D+ + + R+D R YS+ LN G
Sbjct: 544 IDELMRLLQDMKVEGT---RLDARLYSSALNALRDAG 577
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 178/389 (45%), Gaps = 62/389 (15%)
Query: 52 VEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHR-N 110
V++ + DLD +L P+VF N ++ + + +R ++ LF + N
Sbjct: 152 VQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSN 211
Query: 111 LVPNTVTYNTLIDGYCKVGEMEKAFSLKARM--KAPNAEPSVITYNCLLGGLCSSGRVND 168
+VPN V+YN +I+ +C G +++A + + AP A PS +TY L GL +GR+ D
Sbjct: 212 IVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFA-PSSVTYRHLTKGLVQAGRIGD 270
Query: 169 AREVLVEM--EGN------------GFLP-GGFSRIV--FDD-DSACSNGNGSLRANVAA 210
A +L EM +G G+L G F + V FD+ S C+ +G + A
Sbjct: 271 AASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFME 330
Query: 211 -----------------------RIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVP 247
R+ T + LL F + G+ ++A + ++++N P
Sbjct: 331 YWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPP 390
Query: 248 SQISYN-----ILVNAYCHEGYVEKAIQTAEQMEER-GLKP---SYVTFNTLINKFCETG 298
+ +S N I+VN G +AI T +++ + KP Y+ + ++ +FCE G
Sbjct: 391 NILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQG 450
Query: 299 EVDQAERWVKKMLEKGIAPTLETYNSLINGY---GRISNFVKCFEILEEIEKKGMKPNVI 355
+ +AER+ + + + + ++ ++I+ Y RI + VK + + ++ + V
Sbjct: 451 MLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRV----VA 506
Query: 356 SYGS-LINCLCKDRKLLDAEIVLGDMASR 383
+G+ + L K+ KL ++ VL M R
Sbjct: 507 DFGARVFGELIKNGKLTESAEVLTKMGER 535
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 111/286 (38%), Gaps = 32/286 (11%)
Query: 76 VGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAF 135
VG + ++N V L + + A KL + + N P T N +I + ++
Sbjct: 142 VGQRLNLHNRVQS-LIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESI 200
Query: 136 SL-KARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG-FLPGGFSRIVFDD 193
SL + K N P+V++YN ++ C G V++A EV + N F P
Sbjct: 201 SLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSV------- 253
Query: 194 DSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYN 253
TY L G + GRI A +L +++ G YN
Sbjct: 254 ----------------------TYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYN 291
Query: 254 ILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK 313
L+ Y G +KA++ ++++ + + T + + E G +A + +L+K
Sbjct: 292 NLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDK 351
Query: 314 GIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGS 359
T N L+ + + + + + E+ PN++S S
Sbjct: 352 KFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNS 397
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 82/404 (20%), Positives = 145/404 (35%), Gaps = 105/404 (25%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMV-ESGIRPDVVSYGKAVEAAVMLKDLDKGFE 66
P+V + N + + +K++ + +++F +S I P+VVSY + + A ++D+ E
Sbjct: 178 PTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALE 237
Query: 67 LM-GCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYN------ 119
+ + PS Y + GL + R+ DA L EML + ++ YN
Sbjct: 238 VYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGY 297
Query: 120 --------------------TLIDGYCKVGEMEKAF-------------SL---KARMKA 143
T+ DG ME F SL K RM
Sbjct: 298 LDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHP 357
Query: 144 PNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDD--------- 194
P T N LL G+ ++A + EM N P S V D
Sbjct: 358 P-------TGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILS--VNSDTVGIMVNECF 408
Query: 195 -----SACSNGNGSLRANVAAR---IDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVV 246
S N + + V ++ +D Y ++ FC G + +A+ A+ V +
Sbjct: 409 KMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLP 468
Query: 247 PSQISYNILVNAYCHEGYVEKAI--------------------------------QTAE- 273
S+ +++AY ++ A+ ++AE
Sbjct: 469 ADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVADFGARVFGELIKNGKLTESAEV 528
Query: 274 --QMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGI 315
+M ER KP ++ ++ C+ +DQA+ V +M+ +
Sbjct: 529 LTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVGEMIRHNV 572
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 118/288 (40%), Gaps = 64/288 (22%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G PS +S N + LV +K F+++ +F + G+ D
Sbjct: 162 GCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDAC------------------ 203
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
C+ N+++ GLC+ ++ A +L DE + PN +T++ LI G
Sbjct: 204 -----CL------------NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRG 246
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
+C G+ E+AF L RM+ EP IT+N L+ GL GRV + ++L M+ G
Sbjct: 247 FCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKG---- 302
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
C G TY +L G R +AKE++++++ G
Sbjct: 303 ------------CEPNPG-------------TYQEVLYGLLDKKRNLEAKEMMSQMISWG 337
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLIN 292
+ PS +SY +V C V + QM G P + + ++
Sbjct: 338 MRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQ 385
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 113/232 (48%), Gaps = 14/232 (6%)
Query: 163 SGRVNDAREVLVEMEGNGFLPGG----------FSRIVFDDDSACSNGNGSLRANVAARI 212
+GR+N A E+L M G P S +FD+ L I
Sbjct: 145 AGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKL----GVEI 200
Query: 213 DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTA 272
D + L+ G C G +E A ++L + + P+ ++++ L+ +C++G E+A +
Sbjct: 201 DACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLL 260
Query: 273 EQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRI 332
E+ME+ ++P +TFN LI+ + G V++ +++M KG P TY ++ G
Sbjct: 261 ERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDK 320
Query: 333 SNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
++ E++ ++ GM+P+ +SY ++ LC+ + +++ + VL M + G
Sbjct: 321 KRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHG 372
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 125/286 (43%), Gaps = 33/286 (11%)
Query: 81 FVYNL--VLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLK 138
F YNL + G L R+ A ++ M P++ ++N +++ ++ +
Sbjct: 133 FFYNLMRIYGNLAG--RINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIF 190
Query: 139 ARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACS 198
E N L+ GLC SG + A ++L E P SR
Sbjct: 191 VSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDE------FPQQKSR---------- 234
Query: 199 NGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNA 258
NV T+S L+ GFC G+ E+A ++L ++ + + P I++NIL++
Sbjct: 235 -------PNVM------TFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISG 281
Query: 259 YCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPT 318
+G VE+ I E+M+ +G +P+ T+ ++ + +A+ + +M+ G+ P+
Sbjct: 282 LRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPS 341
Query: 319 LETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
+Y ++ G + V+ +L ++ G P + + ++ C+
Sbjct: 342 FLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCV 387
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 151/365 (41%), Gaps = 32/365 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+K G P V NR+ + LV + F+ LAV+ D E G+ + ++ V+
Sbjct: 219 MKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGR 278
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+++ E++ M + P VF Y ++ L + + +++DEM + P+ + Y T
Sbjct: 279 IEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGT 338
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L+ G CK G +E+ + L MK Y L+ G + G+V A + ++ +G
Sbjct: 339 LVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSG 398
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
++ D Y+A++ G C V +++KA ++
Sbjct: 399 YIA-----------------------------DIGIYNAVIKGLCSVNQVDKAYKLFQVA 429
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPS-YVTFNTLINKFCETGE 299
+E + P + + ++ AY + E++ E G S Y+T C E
Sbjct: 430 IEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLT--QFFKLLCADEE 487
Query: 300 VDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGS 359
+ V +L+ ++ YN L+ ++ + K + E+ K G +P+ SY
Sbjct: 488 KNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSI 547
Query: 360 LINCL 364
I C
Sbjct: 548 AICCF 552
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 124/290 (42%), Gaps = 11/290 (3%)
Query: 66 ELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGY 125
+L M+ + PS + +++ RR ++++M P YN ++D
Sbjct: 179 QLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDAL 238
Query: 126 CKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGG 185
K G + A ++ K T+ L+ GLC +GR+ + E+L M N P
Sbjct: 239 VKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDV 298
Query: 186 FSRIVFDDDSACSNGN--GSLRANVAARIDE-----RTYSALLNGFCRVGRIEKAKEVLA 238
F+ + S GN SLR R DE Y L+ G C+ GR+E+ E+
Sbjct: 299 FAYTAM-IKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFM 357
Query: 239 KLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETG 298
++ ++ + Y +L+ + +G V A E + + G +N +I C
Sbjct: 358 EMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVN 417
Query: 299 EVDQAERWVKKMLEKGIAPTLETYNSLINGY---GRISNFVKCFEILEEI 345
+VD+A + + +E+ + P ET + ++ Y R+S+F E + E+
Sbjct: 418 QVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGEL 467
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 9/180 (5%)
Query: 197 CSNGNGSLRA--NVAARID-------ERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVP 247
C N NG RA + +D E+ + L+ R + V K+ + G P
Sbjct: 167 CLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKP 226
Query: 248 SQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWV 307
YN +++A GY + A+ E +E GL TF L+ C+ G +++ +
Sbjct: 227 RVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEIL 286
Query: 308 KKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKD 367
++M E P + Y ++I N + +E+ + +KP+V++YG+L+ LCKD
Sbjct: 287 QRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKD 346
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 73/168 (43%)
Query: 217 YSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQME 276
Y+ +++ + G + A V E+G+V ++ ILV C G +E+ ++ ++M
Sbjct: 231 YNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMR 290
Query: 277 ERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFV 336
E KP + +I G +D + R +M I P + Y +L+ G +
Sbjct: 291 ENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVE 350
Query: 337 KCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ +E+ E++ K + + Y LI D K+ A + D+ G
Sbjct: 351 RGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSG 398
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 72/171 (42%), Gaps = 1/171 (0%)
Query: 213 DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTA 272
D Y+A R G A ++ + G PS+ + IL+ + +
Sbjct: 157 DFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVY 216
Query: 273 EQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRI 332
E+M++ G KP +N +++ + G D A + E G+ T+ L+ G +
Sbjct: 217 EKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKA 276
Query: 333 SNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
+ EIL+ + + KP+V +Y ++I L + LDA + + D R
Sbjct: 277 GRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGN-LDASLRVWDEMRR 326
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 155/357 (43%), Gaps = 45/357 (12%)
Query: 17 FETLV-GSKQFEK---VLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCME 72
+ TL+ G Q ++ L F M+ G P+ + ++AA + G +L G
Sbjct: 129 WTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCV 188
Query: 73 KERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEME 132
K +V V + +L + + DA+ +FD + R N V++N LI G+ + E
Sbjct: 189 KCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR----NDVSWNALIAGHARRSGTE 244
Query: 133 KAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFD 192
KA L M PS +Y L G S+G + + V M +G F+
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA----- 299
Query: 193 DDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISY 252
GN LL+ + + G I A+++ +L + VV S+
Sbjct: 300 -------GN-----------------TLLDMYAKSGSIHDARKIFDRLAKRDVV----SW 331
Query: 253 NILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLE 312
N L+ AY G+ ++A+ E+M G++P+ ++F +++ +G +D+ + + M +
Sbjct: 332 NSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK 391
Query: 313 KGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRK 369
GI P Y ++++ GR + + +EE+ ++P + +L+N C+ K
Sbjct: 392 DGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP---IEPTAAIWKALLNA-CRMHK 444
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 131/327 (40%), Gaps = 46/327 (14%)
Query: 83 YNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMK 142
YN +L + + R + +L + V NTL++ Y K G +E+A + +M
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKM- 121
Query: 143 APNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS--------------- 187
+ +T+ L+ G R DA +M G+ P F+
Sbjct: 122 ---PQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 188 ----------RIVFDDDSACSNG------------NGSLRANVAARIDERTYSALLNGFC 225
+ FD + + + L + ++ +++AL+ G
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 226 RVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYV 285
R EKA E+ ++ +G PS SY L A G++E+ M + G K
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298
Query: 286 TFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEI 345
NTL++ + ++G + A + ++ ++ + ++NSL+ Y + + EE+
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVV----SWNSLLTAYAQHGFGKEAVWWFEEM 354
Query: 346 EKKGMKPNVISYGSLINCLCKDRKLLD 372
+ G++PN IS+ S++ C LLD
Sbjct: 355 RRVGIRPNEISFLSVLTA-CSHSGLLD 380
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 130/310 (41%), Gaps = 28/310 (9%)
Query: 27 EKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLV 86
EK L +F M+ G RP SY A L++G + M K F N +
Sbjct: 244 EKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTL 303
Query: 87 LGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNA 146
L K + DARK+FD + R++ V++N+L+ Y + G ++A M+
Sbjct: 304 LDMYAKSGSIHDARKIFDRLAKRDV----VSWNSLLTAYAQHGFGKEAVWWFEEMRRVGI 359
Query: 147 EPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRI-VFDDDSACSNGNGSLR 205
P+ I++ +L SG +++ M+ +G +P + + V D + N +LR
Sbjct: 360 RPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALR 419
Query: 206 ANVAARIDERT--YSALLNGFCRVGRIEK----AKEVLAKLVENGVVPSQISYNILVNAY 259
I+ + ALLN CR+ + + A E + +L + P I YNI Y
Sbjct: 420 FIEEMPIEPTAAIWKALLNA-CRMHKNTELGAYAAEHVFELDPDDPGPHVILYNI----Y 474
Query: 260 CHEGYVEKAIQTAEQMEERGLKP----SYVTFNTLINKFCETGEVDQ-----AERW---V 307
G A + ++M+E G+K S+V I+ F E A +W +
Sbjct: 475 ASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVL 534
Query: 308 KKMLEKGIAP 317
K+ E G P
Sbjct: 535 AKIKELGYVP 544
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 163/363 (44%), Gaps = 26/363 (7%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P N + S + E+ L ++ M+ S + ++ ++A L ++ ++
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
+ K V+ N ++ K A LFD R P+ V++N++I GY K
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFD----RIPEPDDVSWNSVIKGYVK 193
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
G+M+ A +L +M AE + I++ ++ G + +A ++ EM+ + P S
Sbjct: 194 AGKMDIALTLFRKM----AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVS 249
Query: 188 RIVFDDDSACSNGNG--------SLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAK 239
+ + SAC+ S R+D L++ + + G +E+A EV
Sbjct: 250 --LANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKN 307
Query: 240 LVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGE 299
+ + V ++ L++ Y + G+ +AI +M++ G+KP+ +TF ++ TG
Sbjct: 308 IKKKSVQ----AWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGL 363
Query: 300 VDQAERWVKKM-LEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYG 358
V++ + M + + PT+E Y +++ GR + ++E+ +KPN + +G
Sbjct: 364 VEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMP---LKPNAVIWG 420
Query: 359 SLI 361
+L+
Sbjct: 421 ALL 423
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 154/351 (43%), Gaps = 47/351 (13%)
Query: 14 NRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEK 73
N L L S F + +F M+ SG+ D ++ ++ L+ + G +L G + K
Sbjct: 164 NILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILK 223
Query: 74 ERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEK 133
G V N ++ K +RV ARK+FDEM R++ +++N++I+GY G EK
Sbjct: 224 SGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDV----ISWNSIINGYVSNGLAEK 279
Query: 134 AFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDD 193
S+ +M E + T + G S ++ R V + + FSR
Sbjct: 280 GLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAV-----HSIGVKACFSR----- 329
Query: 194 DSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYN 253
++R + LL+ + + G ++ AK V ++ + VV SY
Sbjct: 330 -------------------EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVV----SYT 366
Query: 254 ILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAER---WVKKM 310
++ Y EG +A++ E+MEE G+ P T ++N +D+ +R W+K
Sbjct: 367 SMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIK-- 424
Query: 311 LEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
E + + N+L++ Y + + + + E+ K ++IS+ ++I
Sbjct: 425 -ENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK----DIISWNTII 470
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/389 (19%), Positives = 156/389 (40%), Gaps = 74/389 (19%)
Query: 11 RSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGC 70
R N L + + AVF +M + VVSY + + +L
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVFREMSDRS----VVSYTSMIAGYAREGLAGEAVKLFEE 387
Query: 71 MEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGE 130
ME+E + P V+ VL + R + + +++ + + +L + N L+D Y K G
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 447
Query: 131 MEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVL-VEMEGNGFLPGGFSRI 189
M++A + + M+ + +I++N ++GG + N+A + + +E F P
Sbjct: 448 MQEAELVFSEMRVKD----IISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSP------ 497
Query: 190 VFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQ 249
DERT + +L + +K +E+ ++ NG +
Sbjct: 498 -----------------------DERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR 534
Query: 250 -------------------------------ISYNILVNAYCHEGYVEKAIQTAEQMEER 278
+S+ +++ Y G+ ++AI QM +
Sbjct: 535 HVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQA 594
Query: 279 GLKPSYVTFNTLINKFCETGEVDQAERWVKKM-LEKGIAPTLETYNSLINGYGRISNFVK 337
G++ ++F +L+ +G VD+ R+ M E I PT+E Y +++ R + +K
Sbjct: 595 GIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIK 654
Query: 338 CFEILEEIEKKGMKPNVISYGSLINCLCK 366
+ +E + + P+ +G+L+ C C+
Sbjct: 655 AYRFIENMP---IPPDATIWGALL-CGCR 679
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 139/291 (47%), Gaps = 35/291 (12%)
Query: 96 VKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNC 155
+K+A ++FDE+ + + +N L++ K G+ + L +M + E T++C
Sbjct: 145 LKEASRVFDEVK----IEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSC 200
Query: 156 LLGGLCSSGRVNDAREVLVEMEGNGF-LPGGFSRIVFDDDSACSNGNGSLRANVAARI-D 213
+ S V+ ++ +GF L GF +S + + R + A ++ D
Sbjct: 201 VSKSFSSLRSVHGGEQL------HGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFD 254
Query: 214 ERT------YSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAY--CHEGYV 265
E T +++++NG+ G EK V +++ +G+ +I +V+ + C +
Sbjct: 255 EMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGI---EIDLATIVSVFAGCADS-- 309
Query: 266 EKAIQTAEQMEERGLKPSYVT----FNTLINKFCETGEVDQAERWVKKMLEKGIAPTLET 321
+ I + G+K + NTL++ + + G++D A+ ++M ++ + +
Sbjct: 310 -RLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVV----S 364
Query: 322 YNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLD 372
Y S+I GY R + ++ EE+E++G+ P+V + +++NC C +LLD
Sbjct: 365 YTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNC-CARYRLLD 414
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 171/383 (44%), Gaps = 30/383 (7%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIR-PDVVSYGKAVEAAVMLKDLDKGFE 66
P+V N + + + V+ ++ ++ PD ++ ++ L G +
Sbjct: 71 PNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQ 130
Query: 67 LMGCMEKERVGPSVFVY--NLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
+ G + K GP V N ++ K + DA K+FDEM R+++ ++N+L+ G
Sbjct: 131 VHGHLCK--FGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVI----SWNSLLSG 184
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG 184
Y ++G+M+KA L M + +++++ ++ G G +A + EM+ G P
Sbjct: 185 YARLGQMKKAKGLFHLM----LDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPD 240
Query: 185 GFSRIVFDDDSACSNGNGSLRANVAARIDERTY-------SALLNGFCRVGRIEKAKEVL 237
S I S G+ L + + R + +AL+ + + G I +A ++
Sbjct: 241 EISLISVLP-SCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLF 299
Query: 238 AKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCET 297
++ V IS++ +++ Y + G AI+T +M+ +KP+ +TF L++
Sbjct: 300 GQMEGKDV----ISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHV 355
Query: 298 GEVDQAERWVKKMLEK-GIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVIS 356
G + R+ M + I P +E Y LI+ R + EI + + MKP+
Sbjct: 356 GMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMP---MKPDSKI 412
Query: 357 YGSLINCLCKDRKLLDAEIVLGD 379
+GSL++ C+ LD +V D
Sbjct: 413 WGSLLSS-CRTPGNLDVALVAMD 434
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 114/261 (43%), Gaps = 34/261 (13%)
Query: 75 RVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHR-NLVPNTVTYNTLIDGYCKVGEMEK 133
++ P+ +N ++ + + +++ EM PN +YN L++ YC G M +
Sbjct: 240 KIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSE 299
Query: 134 AFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDD 193
A + MK ++ YN ++GGLCS+ V A+E+ +M G
Sbjct: 300 AEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGI------------ 347
Query: 194 DSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYN 253
+ C TY L+NG+C+ G ++ V ++ G ++
Sbjct: 348 ECTC-----------------LTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIE 390
Query: 254 ILVNAYCHEGYVEKAIQTAE----QMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKK 309
LV C + ++ ++ A+ + E PS + L+ + CE G++D+A +
Sbjct: 391 ALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAE 450
Query: 310 MLEKGIAPTLETYNSLINGYG 330
M+ KG P+ ETY + I+GYG
Sbjct: 451 MVGKGFKPSQETYRAFIDGYG 471
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 112/246 (45%), Gaps = 35/246 (14%)
Query: 73 KERVG--PSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGE 130
+E VG P+V+ YN+++ C + +A K+++EM R +V + V YNT+I G C E
Sbjct: 272 EEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFE 331
Query: 131 MEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIV 190
+ KA L M E + +TY L+ G C +G V+ V EM+ GF G
Sbjct: 332 VVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGL---- 387
Query: 191 FDDDSACSNGNGSLRANVAARIDERTYSALLNGFC--RVG-RIEKAKEVLAKLVENGVV- 246
T AL+ G C R G R+ +A +++ V +
Sbjct: 388 -------------------------TIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFY 422
Query: 247 PSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERW 306
PS+ Y +LV C +G +++A+ +M +G KPS T+ I+ + G+ + +
Sbjct: 423 PSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEETSALL 482
Query: 307 VKKMLE 312
+M E
Sbjct: 483 AIEMAE 488
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 84/154 (54%), Gaps = 1/154 (0%)
Query: 216 TYSALLNGFCRVGRIEKAKEVLAKLVEN-GVVPSQISYNILVNAYCHEGYVEKAIQTAEQ 274
T+++++ F R G E + + ++ E G P+ SYN+L+ AYC G + +A + E+
Sbjct: 247 TFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEE 306
Query: 275 MEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISN 334
M+ RG+ V +NT+I C EV +A+ + M KGI T TY L+NGY + +
Sbjct: 307 MKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGD 366
Query: 335 FVKCFEILEEIEKKGMKPNVISYGSLINCLCKDR 368
+ E+++KG + + ++ +L+ LC DR
Sbjct: 367 VDSGLVVYREMKRKGFEADGLTIEALVEGLCDDR 400
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 150/358 (41%), Gaps = 53/358 (14%)
Query: 27 EKVLAVFTDMVES----GIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFV 82
++VL VF +++S G P V + +++ + K++D +M + + +
Sbjct: 142 DRVLKVFRSLIKSYNRCGSAPFV--FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQIST 199
Query: 83 YNLVLGGLCKVRRVKDARKLFDEMLHRNLV-------------PNTVTYNTLIDGYCKVG 129
N ++ + + R + K++ E+ + V PN T+N+++ + + G
Sbjct: 200 CNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREG 259
Query: 130 EMEKAFSLKARMKAP-NAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSR 188
E E + M+ P+V +YN L+ C+ G +++A +V EM+ G
Sbjct: 260 ETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRG-------- 311
Query: 189 IVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPS 248
+V+D + A Y+ ++ G C + KAKE+ + G+ +
Sbjct: 312 VVYD---------------IVA------YNTMIGGLCSNFEVVKAKELFRDMGLKGIECT 350
Query: 249 QISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGE----VDQAE 304
++Y LVN YC G V+ + +M+ +G + +T L+ C+ + V+ A+
Sbjct: 351 CLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAAD 410
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLIN 362
+ E P+ Y L+ + I E+ KG KP+ +Y + I+
Sbjct: 411 IVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFID 468
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 230 IEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEER-GLKPSYVTFN 288
+++AK+++ K + P+ ++N ++ ++ EG E + +MEE G P+ ++N
Sbjct: 231 VDEAKKMIGK-----IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYN 285
Query: 289 TLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNF--VKCFEILEEIE 346
L+ +C G + +AE+ ++M +G+ + YN++I G SNF VK E+ ++
Sbjct: 286 VLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGL--CSNFEVVKAKELFRDMG 343
Query: 347 KKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
KG++ ++Y L+N CK + +V +M +G
Sbjct: 344 LKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKG 381
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 82/193 (42%), Gaps = 4/193 (2%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G P+V S N L E + V+ +M G+ D+V+Y + ++ K
Sbjct: 276 GCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKA 335
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
EL M + + + Y ++ G CK V ++ EM + + +T L++G
Sbjct: 336 KELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEG 395
Query: 125 YC--KVGE--MEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
C + G+ +E A +K ++ PS Y L+ LC G+++ A + EM G G
Sbjct: 396 LCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKG 455
Query: 181 FLPGGFSRIVFDD 193
F P + F D
Sbjct: 456 FKPSQETYRAFID 468
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 172/387 (44%), Gaps = 53/387 (13%)
Query: 16 LFETLV----GSKQFEKVLAVFTDMVESG-IRPDVVSYGKAVEAAVMLKDLDKGFELMGC 70
+F TLV S + +AVF +M+ G + PD S+ ++A + L GF++
Sbjct: 72 MFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQ 131
Query: 71 MEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVP----------------- 113
K + +FV ++G V+ ARK+FDEM NLV
Sbjct: 132 ALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGA 191
Query: 114 ----------NTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSS 163
N ++N ++ GY K GE+E A + + M P+ + ++++ ++ G+ +
Sbjct: 192 REIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEM--PHRDD--VSWSTMIVGIAHN 247
Query: 164 GRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACS-NGNGSLRANVAARIDERTYS---- 218
G N++ E++ G P S + SACS +G+ + +++ YS
Sbjct: 248 GSFNESFLYFRELQRAGMSPNEVS--LTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVS 305
Query: 219 ---ALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQM 275
AL++ + R G + A+ V + E + +S+ ++ G E+A++ +M
Sbjct: 306 VNNALIDMYSRCGNVPMARLVFEGMQEKRCI---VSWTSMIAGLAMHGQGEEAVRLFNEM 362
Query: 276 EERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLE-KGIAPTLETYNSLINGYGRISN 334
G+ P ++F +L++ G +++ E + +M I P +E Y +++ YGR
Sbjct: 363 TAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGK 422
Query: 335 FVKCFEILEEIEKKGMKPNVISYGSLI 361
K ++ + ++ + P I + +L+
Sbjct: 423 LQKAYDFICQMP---IPPTAIVWRTLL 446
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 97/220 (44%), Gaps = 25/220 (11%)
Query: 147 EPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGF-LPGGFSRIVFDDDSACSNGNGSLR 205
EP +N L+ G S +++ V VEM GF P FS F SLR
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFS---FAFVIKAVENFRSLR 123
Query: 206 ANVAARIDERTY---------SALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILV 256
+ + L+ + G +E A++V ++ + P+ +++N ++
Sbjct: 124 TGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQ----PNLVAWNAVI 179
Query: 257 NAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIA 316
A C G + A ++ ++ L ++ ++N ++ + + GE++ A+R +M +
Sbjct: 180 TA-CFRG---NDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDV 235
Query: 317 PTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVIS 356
+++++I G +F + F E+++ GM PN +S
Sbjct: 236 ----SWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVS 271
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 142/320 (44%), Gaps = 39/320 (12%)
Query: 28 KVLAVFTDMVESG-IRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLV 86
+ + +F++M+ G + P+ ++ A +A L D G +++G K + + V N V
Sbjct: 355 EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSV 414
Query: 87 LGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNA 146
+ K R++DA++ F+ + +NLV +YNT +DG C+ E+AF L + +
Sbjct: 415 ISMFVKSDRMEDAQRAFESLSEKNLV----SYNTFLDGTCRNLNFEQAFKLLSEITEREL 470
Query: 147 EPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRA 206
S T+ LL G+ + G + ++ S++V
Sbjct: 471 GVSAFTFASLLSGVANVGSIRKGEQI-------------HSQVV---------------- 501
Query: 207 NVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVE 266
+ ++ +AL++ + + G I+ A V +EN V IS+ ++ + G+
Sbjct: 502 KLGLSCNQPVCNALISMYSKCGSIDTASRVF-NFMENRNV---ISWTSMITGFAKHGFAI 557
Query: 267 KAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLE-KGIAPTLETYNSL 325
+ ++T QM E G+KP+ VT+ +++ G V + R M E I P +E Y +
Sbjct: 558 RVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACM 617
Query: 326 INGYGRISNFVKCFEILEEI 345
++ R FE + +
Sbjct: 618 VDLLCRAGLLTDAFEFINTM 637
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 154/345 (44%), Gaps = 33/345 (9%)
Query: 33 FTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCK 92
F DMV SG D + A L++L G +L + + V + + C
Sbjct: 257 FLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCS 316
Query: 93 VR-RVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEM-EKAFSLKARMKAP-NAEPS 149
V D RK+FD M +++ ++ LI GY K + +A +L + M + EP+
Sbjct: 317 ADGSVDDCRKVFDRMEDHSVM----SWTALITGYMKNCNLATEAINLFSEMITQGHVEPN 372
Query: 150 VITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSL----- 204
T++ + G ++D R V ++ G F G +S+ +N S+
Sbjct: 373 HFTFS---SAFKACGNLSDPR-VGKQVLGQAFKRG------LASNSSVANSVISMFVKSD 422
Query: 205 RANVAARIDER-------TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVN 257
R A R E +Y+ L+G CR E+A ++L+++ E + S ++ L++
Sbjct: 423 RMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLS 482
Query: 258 AYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAP 317
+ G + K Q Q+ + GL + N LI+ + + G +D A R M + +
Sbjct: 483 GVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVI- 541
Query: 318 TLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLIN 362
++ S+I G+ + ++ E ++ ++G+KPN ++Y ++++
Sbjct: 542 ---SWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILS 583
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 129/302 (42%), Gaps = 42/302 (13%)
Query: 75 RVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKA 134
V P+ F ++ + + +++ + R L N+ N++I + K ME A
Sbjct: 368 HVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDA 427
Query: 135 FSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDD 194
R +E ++++YN L G C + A ++L E+ F
Sbjct: 428 ----QRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAF-------- 475
Query: 195 SACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNI 254
T+++LL+G VG I K +++ +++V+ G+ +Q N
Sbjct: 476 ---------------------TFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNA 514
Query: 255 LVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKG 314
L++ Y G ++ A + ME R + +++ ++I F + G + +M+E+G
Sbjct: 515 LISMYSKCGSIDTASRVFNFMENRNV----ISWTSMITGFAKHGFAIRVLETFNQMIEEG 570
Query: 315 IAPTLETYNSLING---YGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLL 371
+ P TY ++++ G +S + F + E K +KP + Y +++ LC+ L
Sbjct: 571 VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHK--IKPKMEHYACMVDLLCRAGLLT 628
Query: 372 DA 373
DA
Sbjct: 629 DA 630
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 144/340 (42%), Gaps = 28/340 (8%)
Query: 60 DLDKGFELMGCMEKERVGP-SVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTY 118
DL + M ++ + P ++ +L + R + + + ++ ++ P++V Y
Sbjct: 41 DLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLY 100
Query: 119 NTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEG 178
N+LI Y K G+ KA + M+ + V++++ ++ ++GR DA +V VE
Sbjct: 101 NSLISLYSKSGDSAKAEDVFETMRRF-GKRDVVSWSAMMACYGNNGRELDAIKVFVEFLE 159
Query: 179 NGFLPGGFSRIVFDDDSACSNGN---------GSLRANVAARIDERTYSALLNGFCR-VG 228
G +P + ACSN + G L D +L++ F +
Sbjct: 160 LGLVPNDYCYTAV--IRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGEN 217
Query: 229 RIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFN 288
E A +V K+ E VV ++ +++ G+ +AI+ M G + T +
Sbjct: 218 SFENAYKVFDKMSELNVV----TWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLS 273
Query: 289 TLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRIS---NFVKCFEILEEI 345
++ + E + ++ + G+ +E SL++ Y + S + C ++ + +
Sbjct: 274 SVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRM 331
Query: 346 EKKGMKPNVISYGSLINCLCKDRKLLDAEI-VLGDMASRG 384
E +V+S+ +LI K+ L I + +M ++G
Sbjct: 332 EDH----SVMSWTALITGYMKNCNLATEAINLFSEMITQG 367
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 158/352 (44%), Gaps = 44/352 (12%)
Query: 30 LAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGG 89
L+ F+ M GI D +Y +++ L DL G C+ E + + G
Sbjct: 87 LSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFG----KCVHGELIRTGFHRLGKIRIG 142
Query: 90 LCKVR----RVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPN 145
+ ++ R+ DA+K+FDEM RN+ V +N +I G+C G++E+ L +M
Sbjct: 143 VVELYTSGGRMGDAQKVFDEMSERNV----VVWNLMIRGFCDSGDVERGLHLFKQM---- 194
Query: 146 AEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGF----------LPGGFSRIVFDDD- 194
+E S++++N ++ L GR +A E+ EM GF LP S V D
Sbjct: 195 SERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGK 254
Query: 195 --SACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISY 252
+ + +G + + +AL++ +C+ G +E A + K+ VV S+
Sbjct: 255 WIHSTAESSGLFKDFITVG------NALVDFYCKSGDLEAATAIFRKMQRRNVV----SW 304
Query: 253 NILVNAYCHEGYVEKAIQTAEQMEERG-LKPSYVTFNTLINKFCETGEVDQAERWVKKML 311
N L++ G E I + M E G + P+ TF ++ TG+V++ E M+
Sbjct: 305 NTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMM 364
Query: 312 EK-GIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLIN 362
E+ + E Y ++++ R + F+ L+ + + N +GSL++
Sbjct: 365 ERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMP---VNANAAMWGSLLS 413
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 110/272 (40%), Gaps = 38/272 (13%)
Query: 113 PNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREV 172
PN + +N +I Y VG ++ S + MK+ TY LL S + + V
Sbjct: 65 PNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCV 124
Query: 173 LVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEK 232
E+ + GF R+ G +R V + GR+
Sbjct: 125 HGEL-----IRTGFHRL------------GKIRIGVVEL------------YTSGGRMGD 155
Query: 233 AKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLIN 292
A++V ++ E VV +N+++ +C G VE+ + +QM ER S V++N++I+
Sbjct: 156 AQKVFDEMSERNVVV----WNLMIRGFCDSGDVERGLHLFKQMSER----SIVSWNSMIS 207
Query: 293 KFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKP 352
+ G +A +M+++G P T +++ + I E G+
Sbjct: 208 SLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFK 267
Query: 353 NVISYG-SLINCLCKDRKLLDAEIVLGDMASR 383
+ I+ G +L++ CK L A + M R
Sbjct: 268 DFITVGNALVDFYCKSGDLEAATAIFRKMQRR 299
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/324 (19%), Positives = 136/324 (41%), Gaps = 40/324 (12%)
Query: 78 PSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLID----------GYCK 127
P+V V+N ++ V ++ F M R + + TY L+ G C
Sbjct: 65 PNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCV 124
Query: 128 VGEM-EKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGF 186
GE+ F +++ E S GR+ DA++V EM +
Sbjct: 125 HGELIRTGFHRLGKIRIGVVEL-----------YTSGGRMGDAQKVFDEMSERNVVVWNL 173
Query: 187 SRIVFDDDSACSNGNGSLRANVAARIDER---TYSALLNGFCRVGRIEKAKEVLAKLVEN 243
F C +G+ ++ ++ ER +++++++ + GR +A E+ ++++
Sbjct: 174 MIRGF-----CDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQ 228
Query: 244 GVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTF-NTLINKFCETGEVDQ 302
G P + + ++ G ++ E GL ++T N L++ +C++G+++
Sbjct: 229 GFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEA 288
Query: 303 AERWVKKMLEKGIAPTLETYNSLINGY---GRISNFVKCFEILEEIEKKGMKPNVISYGS 359
A +KM + + ++N+LI+G G+ + F+ + IE+ + PN ++
Sbjct: 289 ATAIFRKMQRRNVV----SWNTLISGSAVNGKGEFGIDLFDAM--IEEGKVAPNEATFLG 342
Query: 360 LINCLCKDRKLLDAEIVLGDMASR 383
++ C ++ E + G M R
Sbjct: 343 VLACCSYTGQVERGEELFGLMMER 366
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 120/286 (41%), Gaps = 43/286 (15%)
Query: 45 VVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFD 104
+ SYG+A M K FE M + R +V +N +L + +LFD
Sbjct: 109 IRSYGRAS----MFDHAMKMFEEMDKLGTPR---TVVSFNALLAACLHSDLFERVPQLFD 161
Query: 105 EMLHR--NLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCS 162
E R N+ P+ ++Y LI YC G+ EKA + M+ E ++I + +LG L
Sbjct: 162 EFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYK 221
Query: 163 SGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLN 222
+G V++A + +EM G C +D Y+ L
Sbjct: 222 NGLVDEAESLWIEMVNKG----------------CD-------------LDNTVYNVRLM 252
Query: 223 GFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKP 282
+ E+ KE++ ++ G+ P +SYN L+ AYC +G + +A + E +E+ P
Sbjct: 253 NAAKESP-ERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLEQ----P 307
Query: 283 SYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLING 328
+ TF TLI C G DQ KK P +T L G
Sbjct: 308 NAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEG 353
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 5/153 (3%)
Query: 216 TYSALLNGFCRVGRIEKAKEVLAKLVE--NGVVPSQISYNILVNAYCHEGYVEKAIQTAE 273
+++ALL E+ ++ + + N + P +ISY +L+ +YC G EKA++
Sbjct: 139 SFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMR 198
Query: 274 QMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYN-SLINGYGRI 332
ME +G++ + + F T++ + G VD+AE +M+ KG YN L+N
Sbjct: 199 DMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAKES 258
Query: 333 SNFVKCFEILEEIEKKGMKPNVISYGSLINCLC 365
VK E++EE+ G+KP+ +SY L+ C
Sbjct: 259 PERVK--ELMEEMSSVGLKPDTVSYNYLMTAYC 289
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 16/260 (6%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVE--SGIRPDVVSYGKAVEAAVML 58
M K G +V S N L + S FE+V +F + + + I PD +SYG +++
Sbjct: 128 MDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDS 187
Query: 59 KDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTY 118
+K E+M ME + V ++ + +LG L K V +A L+ EM+++ + Y
Sbjct: 188 GKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVY 247
Query: 119 NTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEG 178
N + K E+ L M + +P ++YN L+ C G +++A++V +E
Sbjct: 248 NVRLMNAAKESP-ERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLEQ 306
Query: 179 NGFLPGGFSRIVFDDDSACSNG--NGSL----RANVAARI-DERTYSALLNGFCRVGRIE 231
F ++F C NG + L ++ + +I D +T L G + R+E
Sbjct: 307 PN--AATFRTLIF---HLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRME 361
Query: 232 KAKEVLAKLVENGVVPSQIS 251
A+ V A++V+ P ++
Sbjct: 362 DARGV-ARIVKKKFPPRLVT 380
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 145/338 (42%), Gaps = 40/338 (11%)
Query: 25 QFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYN 84
+ + L +F DM IRP ++++ + A+ L L ++ G M K + +F +
Sbjct: 434 ELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGS 493
Query: 85 LVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAP 144
++ +KD+R +FDEM ++LV +N++ GY + E E+A +L ++
Sbjct: 494 ALIDVYSNCYCLKDSRLVFDEMKVKDLV----IWNSMFAGYVQQSENEEALNLFLELQLS 549
Query: 145 NAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSL 204
P T+ ++ + V +E ++ G
Sbjct: 550 RERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGL----------------------- 586
Query: 205 RANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGY 264
+ +ALL+ + + G E A + VV +N ++++Y + G
Sbjct: 587 ------ECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVV----CWNSVISSYANHGE 636
Query: 265 VEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNS 324
+KA+Q E+M G++P+Y+TF +++ G V+ + + ML GI P E Y
Sbjct: 637 GKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVC 696
Query: 325 LINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLIN 362
+++ GR K E+ IEK KP I + SL++
Sbjct: 697 MVSLLGRAGRLNKAREL---IEKMPTKPAAIVWRSLLS 731
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 124/302 (41%), Gaps = 37/302 (12%)
Query: 14 NRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEK 73
N +F V + E+ L +F ++ S RPD ++ V AA L + G E + K
Sbjct: 524 NSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLK 583
Query: 74 ERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEK 133
+ + ++ N +L K +DA K FD R++ V +N++I Y GE +K
Sbjct: 584 RGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDV----VCWNSVISSYANHGEGKK 639
Query: 134 AFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDD 193
A + +M + EP+ IT+ +L +G V D + M G P
Sbjct: 640 ALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEP---------- 689
Query: 194 DSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYN 253
+ Y +++ R GR+ KA+E++ K+ P+ I +
Sbjct: 690 -------------------ETEHYVCMVSLLGRAGRLNKARELIEKMPTK---PAAIVWR 727
Query: 254 ILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK 313
L++ G VE A AE K S +F L N + G +A++ ++M +
Sbjct: 728 SLLSGCAKAGNVELAEHAAEMAILSDPKDS-GSFTMLSNIYASKGMWTEAKKVRERMKVE 786
Query: 314 GI 315
G+
Sbjct: 787 GV 788
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 126/276 (45%), Gaps = 27/276 (9%)
Query: 99 ARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSL-----KARMKAPNAEPSVITY 153
ARK+F++M RNLV +++T++ G E++ + + R +PN E + ++
Sbjct: 98 ARKVFEKMPERNLV----SWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPN-EYILSSF 152
Query: 154 NCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDD----DSACSNGNGSLRANVA 209
GL GR +V + + GF R V+ D +GN V
Sbjct: 153 IQACSGLDGRGRW------MVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVF 206
Query: 210 ARIDER---TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVE 266
+ E+ T++ +++G ++GR + ++ +L+E+ VVP + +++A ++E
Sbjct: 207 DALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLE 266
Query: 267 KAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLI 326
Q + GL+ N LI+ + + G V A + M K I ++ +L+
Sbjct: 267 GGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNII----SWTTLL 322
Query: 327 NGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLIN 362
+GY + + + E+ + K G+KP++ + S++
Sbjct: 323 SGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILT 358
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 159/370 (42%), Gaps = 30/370 (8%)
Query: 37 VESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRV 96
V S RP + + + A + +L G + + + P++ YNL+ VR+
Sbjct: 122 VYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKP 181
Query: 97 KDA---RKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITY 153
+ A KLF + + L P+ T+ L+ G +EKA +K M + Y
Sbjct: 182 EIALEHYKLFID--NAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVY 239
Query: 154 NCLLGGLCSSGRVNDAREVLVEMEGN--GFLPGG----------FSRIVFDDDSACSNGN 201
+ L+ G + + ++ E++ GF+ G F + + + C
Sbjct: 240 SYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEE- 298
Query: 202 GSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQI-----SYNILV 256
++ N R+ Y+ +L G+ ++A ++ + + P + ++N++V
Sbjct: 299 -AVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMV 357
Query: 257 NAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIA 316
N YC G E+A++ QM + P ++FN L+N+ C+ + +AE+ +M EK +
Sbjct: 358 NGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVK 417
Query: 317 PTLETYNSLING---YGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDA 373
P TY L++ G+I ++ + E ++PN+ Y L + L K KL DA
Sbjct: 418 PDEYTYGLLMDTCFKEGKIDEGAAYYKTMVE---SNLRPNLAVYNRLQDQLIKAGKLDDA 474
Query: 374 EIVLGDMASR 383
+ M S+
Sbjct: 475 KSFFDMMVSK 484
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 148/334 (44%), Gaps = 45/334 (13%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESG-IRPDVVSYGKAVEAAVMLKDLDK 63
G+ P++ + N +F+ + ++ E L + +++ + P + ++ V+ V +L+K
Sbjct: 160 GIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEK 219
Query: 64 GFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHR--NLVPNTVTYNTL 121
E+ M + VY+ ++ G K KL+ E+ + V + V Y L
Sbjct: 220 AMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQL 279
Query: 122 IDGYCKVGEMEKAF----------SLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDARE 171
+ GY + EMEK + K RM S + YN +L L +G+ ++A +
Sbjct: 280 MKGYF-MKEMEKEAMECYEEAVGENSKVRM-------SAMAYNYVLEALSENGKFDEALK 331
Query: 172 VLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIE 231
+ FD N L N+ T++ ++NG+C G+ E
Sbjct: 332 L------------------FDAVKKEHNPPRHLAVNLG------TFNVMVNGYCAGGKFE 367
Query: 232 KAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLI 291
+A EV ++ + P +S+N L+N C + +A + +MEE+ +KP T+ L+
Sbjct: 368 EAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLM 427
Query: 292 NKFCETGEVDQAERWVKKMLEKGIAPTLETYNSL 325
+ + G++D+ + K M+E + P L YN L
Sbjct: 428 DTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRL 461
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 16/193 (8%)
Query: 9 SVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRP------DVVSYGKAVEAAVMLKDLD 62
S + N + E L + +F++ L +F D V+ P ++ ++ V +
Sbjct: 309 SAMAYNYVLEALSENGKFDEALKLF-DAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFE 367
Query: 63 KGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLI 122
+ E+ M + P +N ++ LC + +A KL+ EM +N+ P+ TY L+
Sbjct: 368 EAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLM 427
Query: 123 DGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFL 182
D K G++++ + M N P++ YN L L +G+++DA+ F
Sbjct: 428 DTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAK---------SFF 478
Query: 183 PGGFSRIVFDDDS 195
S++ DD++
Sbjct: 479 DMMVSKLKMDDEA 491
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 119/257 (46%), Gaps = 40/257 (15%)
Query: 82 VYNLVLGGLCKVRRVKDARKLFDEML-HRNL--VPNTVTYNTLI--------DGYCKVGE 130
+YN ++ K ++ A +F M+ +NL P TY+ L + Y
Sbjct: 209 LYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVY 268
Query: 131 MEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIV 190
ME SL +M EP V NCL+ G S VNDA + +M +V
Sbjct: 269 METVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMS-----------VV 317
Query: 191 FDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQI 250
+D + + TY L++G C GR A+E+L+++ G VP+
Sbjct: 318 YDCEP-----------------NSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGK 360
Query: 251 SYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKM 310
SYN LVNA+ G ++ A++ +M E G ++++ TL+++ C G+ D+A R ++ +
Sbjct: 361 SYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEML 420
Query: 311 LEKGIAPTLETYNSLIN 327
EK + ++Y+ L+N
Sbjct: 421 REKQLVDR-DSYDKLVN 436
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 9/175 (5%)
Query: 8 PSVRSVNRLFETLVGSKQ--------FEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLK 59
P++R+ + LF+ L+G E V ++F MV+SGI PDV + V+ V+
Sbjct: 243 PTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSL 302
Query: 60 DLDKGFELMGCMEK-ERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTY 118
++ + M P+ F Y+ ++ GLC R +AR+L EM + VPN +Y
Sbjct: 303 HVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSY 362
Query: 119 NTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVL 173
N+L++ + GE++ A M I+Y L+ C G+ ++A +L
Sbjct: 363 NSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLL 417
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 15/183 (8%)
Query: 207 NVAARIDERTYSALL--------NGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNA 258
N+ R RTY L N + +E + + ++V++G+ P + N LV
Sbjct: 238 NLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKG 297
Query: 259 YCHEGYVEKAIQTAEQMEE-RGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAP 317
Y +V A++ QM +P+ T++ LI+ C G A + +M KG P
Sbjct: 298 YVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVP 357
Query: 318 TLETYNSLINGY---GRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAE 374
++YNSL+N + G I + VKC L E+ + G + ISY +L++ C+ K +A
Sbjct: 358 NGKSYNSLVNAFALSGEIDDAVKC---LWEMIENGRVVDFISYRTLVDESCRKGKYDEAT 414
Query: 375 IVL 377
+L
Sbjct: 415 RLL 417
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 136/289 (47%), Gaps = 26/289 (8%)
Query: 83 YNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARM- 141
Y++ + L + ++ + +++L + N YN++I + K G++ +A ++ M
Sbjct: 175 YHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMV 234
Query: 142 KAPNAE--PSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSN 199
+ N E P++ TY+ L L GR N++ V ME L F ++V
Sbjct: 235 TSKNLECRPTIRTYHILFKALL--GRGNNSYINHVYMETVRSL---FRQMV--------- 280
Query: 200 GNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL-VENGVVPSQISYNILVNA 258
+ + +V A + L+ G+ + A + ++ V P+ +Y+ L++
Sbjct: 281 -DSGIEPDVFA------LNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHG 333
Query: 259 YCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPT 318
C +G A + +M+ +G P+ ++N+L+N F +GE+D A + + +M+E G
Sbjct: 334 LCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVD 393
Query: 319 LETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKD 367
+Y +L++ R + + +LE + +K + + SY L+N L KD
Sbjct: 394 FISYRTLVDESCRKGKYDEATRLLEMLREKQLV-DRDSYDKLVNVLHKD 441
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 12/184 (6%)
Query: 213 DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVV---PSQISYNILV--------NAYCH 261
+E Y++++ F + G++ +A + +V + + P+ +Y+IL N+Y +
Sbjct: 206 NENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYIN 265
Query: 262 EGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKM-LEKGIAPTLE 320
Y+E QM + G++P N L+ + + V+ A R +M + P
Sbjct: 266 HVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSF 325
Query: 321 TYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDM 380
TY+ LI+G + E+L E++ KG PN SY SL+N ++ DA L +M
Sbjct: 326 TYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEM 385
Query: 381 ASRG 384
G
Sbjct: 386 IENG 389
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 139/316 (43%), Gaps = 36/316 (11%)
Query: 38 ESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVK 97
+ I PDV + + DK L + K + + +YN V+ + +
Sbjct: 622 QKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLD 681
Query: 98 DARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKA---FSLKARMKAPNAEPSVITYN 154
+ F+EM+ PNTVT+N L+D Y K +K F L R + VI+YN
Sbjct: 682 ELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKR----HGVVDVISYN 737
Query: 155 CLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDE 214
++ + + + M+ +GF + SL A
Sbjct: 738 TIIAAYGKNKDYTNMSSAIKNMQFDGF-------------------SVSLEA-------- 770
Query: 215 RTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQ 274
Y+ LL+ + + ++EK + +L ++ ++ P +YNI++N Y +G++++ ++
Sbjct: 771 --YNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKE 828
Query: 275 MEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISN 334
++E GL P ++NTLI + G V++A VK+M + I P TY +L+ R
Sbjct: 829 LKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDE 888
Query: 335 FVKCFEILEEIEKKGM 350
F++ + +++ G+
Sbjct: 889 FLEAIKWSLWMKQMGI 904
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 171/390 (43%), Gaps = 16/390 (4%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M + GV P+V ++ L + E+ F+ M + GI + +Y + L+
Sbjct: 236 MLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCES-AYSSMITIYTRLRL 294
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
DK E++ M+++RV + + ++L + +++ A + M PN + YNT
Sbjct: 295 YDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNT 354
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI GY K+ +ME A L R+ EP +Y ++ G + +A+ E++ G
Sbjct: 355 LITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCG 414
Query: 181 FLPGGFSRIVFDDDSA-CSNGNGSLRANVAARIDERT-----YSA----LLNGFCRVGRI 230
+ P F+ + A + +G+++ I++ T YS+ +L + +VG+I
Sbjct: 415 YKPNSFNLFTLINLQAKYGDRDGAIKT-----IEDMTGIGCQYSSILGIILQAYEKVGKI 469
Query: 231 EKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTL 290
+ VL N + +Q S++ LV AY G V+ + + + R ++ L
Sbjct: 470 DVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLL 529
Query: 291 INKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGM 350
I E+G++ A + +E L +++I+ Y + F + ++ ++ G+
Sbjct: 530 ICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGV 589
Query: 351 KPNVISYGSLINCLCKDRKLLDAEIVLGDM 380
+ I + ++ K L +A VL M
Sbjct: 590 VLDRIGFSIVVRMYVKAGSLEEACSVLEIM 619
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 137/309 (44%), Gaps = 17/309 (5%)
Query: 74 ERVGPSVFVYNLVLGG----LCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVG 129
+R+G S+ V V G C V + D +K ++VP+ + ++ Y K
Sbjct: 592 DRIGFSIVVRMYVKAGSLEEACSVLEIMDEQK--------DIVPDVYLFRDMLRIYQKCD 643
Query: 130 EMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRI 189
+K L R++ + YNC++ + +++ EM GF P +
Sbjct: 644 LQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFN 703
Query: 190 VFDDDSACSN-----GNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
V D + L A +D +Y+ ++ + + + + +G
Sbjct: 704 VLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDG 763
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
S +YN L++AY + +EK ++M++ P + T+N +IN + E G +D+
Sbjct: 764 FSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVA 823
Query: 305 RWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCL 364
+K++ E G+ P L +YN+LI YG + +++E+ + + P+ ++Y +L+ L
Sbjct: 824 DVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTAL 883
Query: 365 CKDRKLLDA 373
++ + L+A
Sbjct: 884 RRNDEFLEA 892
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 130/305 (42%), Gaps = 33/305 (10%)
Query: 63 KGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEML-HRNLVPNTVTYNTL 121
K F+ M C K VG V Y+L+L L + A L E+ + +NT+
Sbjct: 159 KFFDWMRCNGK-LVGNFV-AYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTV 216
Query: 122 IDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGF 181
I K G ++ A M P+V T L+G + V +A M G
Sbjct: 217 IYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGI 276
Query: 182 LPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLV 241
+ C E YS+++ + R+ +KA+EV+ +
Sbjct: 277 V--------------C----------------ESAYSSMITIYTRLRLYDKAEEVIDLMK 306
Query: 242 ENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVD 301
++ V ++ +++NAY +G +E A ME G P+ + +NTLI + + +++
Sbjct: 307 QDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKME 366
Query: 302 QAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
A+ ++ G+ P +Y S+I G+GR N+ + +E+++ G KPN + +LI
Sbjct: 367 AAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLI 426
Query: 362 NCLCK 366
N K
Sbjct: 427 NLQAK 431
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/357 (19%), Positives = 156/357 (43%), Gaps = 14/357 (3%)
Query: 38 ESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVF---VYNLVLGGLCKVR 94
+ IR + S+ V A V +D + +G + +++ S F +Y+L++ +
Sbjct: 481 HNHIRLNQTSFSSLVMAYVKHGMVD---DCLGLLREKKWRDSAFESHLYHLLICSCKESG 537
Query: 95 RVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYN 154
++ DA K+++ + + N +T+ID Y +GE +A L +K+ I ++
Sbjct: 538 QLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFS 597
Query: 155 CLLGGLCSSGRVNDAREVLVEMEGNG------FLPGGFSRIVFDDDSACSNGNGSLRANV 208
++ +G + +A VL M+ +L RI D + R
Sbjct: 598 IVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRK 657
Query: 209 AA-RIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEK 267
+ ++ Y+ ++N R +++ +++ G P+ +++N+L++ Y +K
Sbjct: 658 SGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKK 717
Query: 268 AIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLIN 327
+ + G+ +++NT+I + + + +K M G + +LE YN+L++
Sbjct: 718 VNELFLLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLD 776
Query: 328 GYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
YG+ K IL+ ++K P+ +Y +IN + + + VL ++ G
Sbjct: 777 AYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESG 833
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 114/280 (40%), Gaps = 30/280 (10%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
+RK G+ + N + + +++ F +M+ G P+ V++ ++ K
Sbjct: 655 IRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKL 714
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
K EL ++ V V YN ++ K + + M + YNT
Sbjct: 715 FKKVNELFLLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNT 773
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L+D Y K +MEK S+ RMK + P TYN ++ G +++ +VL E++ +G
Sbjct: 774 LLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESG 833
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
P CS Y+ L+ + G +E+A ++ ++
Sbjct: 834 LGP-----------DLCS------------------YNTLIKAYGIGGMVEEAVGLVKEM 864
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGL 280
++P +++Y LV A +AI+ + M++ G+
Sbjct: 865 RGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 138/352 (39%), Gaps = 52/352 (14%)
Query: 66 ELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGY 125
EL G E ++ S V+N V+ K VK A K F ML + PN T L+ Y
Sbjct: 199 ELCGFHEFQK---SYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLY 255
Query: 126 CK---VGEMEKAFS------------------LKARMKAPNAEPSVI------------- 151
K V E E AFS + R++ + VI
Sbjct: 256 QKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLE 315
Query: 152 TYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG---------GFSRIVFDDDSACSNGNG 202
+ +L G++ A +LV ME GF P G+ +I F ++A G
Sbjct: 316 NWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKI-FKMEAA--QGLF 372
Query: 203 SLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHE 262
N+ DE +Y +++ G+ R E+AK +L G P+ + L+N
Sbjct: 373 HRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKY 432
Query: 263 GYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETY 322
G + AI+T E M G + S + ++ + + G++D +K I ++
Sbjct: 433 GDRDGAIKTIEDMTGIGCQYSSI-LGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSF 491
Query: 323 NSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDR-KLLDA 373
+SL+ Y + C +L E + + Y LI C CK+ +L DA
Sbjct: 492 SSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLI-CSCKESGQLTDA 542
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 145/312 (46%), Gaps = 17/312 (5%)
Query: 74 ERVGPS--VFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEM 131
E + PS V +YN+ + K + ++ + KLFDEML R + P+ T+ T+I + G
Sbjct: 167 ETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVP 226
Query: 132 EKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVL--VEMEGNGFLPGGFSRI 189
++A +M + EP +T ++ +G V+ A + E FS +
Sbjct: 227 KRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTL 286
Query: 190 -----VFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENG 244
V + C N ++A + + + Y+ L++ R R +AK + L+ NG
Sbjct: 287 IRIYGVSGNYDGCLNIYEEMKA-LGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNG 345
Query: 245 VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAE 304
P+ +Y LV AY Y + A+ +M+E+GL + + +NTL++ + VD+A
Sbjct: 346 FTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAF 405
Query: 305 RWVKKMLE-KGIAPTLETYNSLINGY---GRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
+ M + P T++SLI Y GR+S + L ++ + G +P + S+
Sbjct: 406 EIFQDMKNCETCDPDSWTFSSLITVYACSGRVS---EAEAALLQMREAGFEPTLFVLTSV 462
Query: 361 INCLCKDRKLLD 372
I C K +++ D
Sbjct: 463 IQCYGKAKQVDD 474
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 124/306 (40%), Gaps = 15/306 (4%)
Query: 23 SKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFV 82
SK EK +F +M+E GI+PD ++ + A + E M P
Sbjct: 188 SKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVT 247
Query: 83 YNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMK 142
++ + V A L+D + VT++TLI Y G + ++ MK
Sbjct: 248 MAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMK 307
Query: 143 APNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG---------GFSRIVFDD 193
A +P+++ YN L+ + + R A+ + ++ NGF P + R + D
Sbjct: 308 ALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGD 367
Query: 194 DSACSNGNGSLRANVAARIDERTYSALLNGFCRVGR-IEKAKEVLAKLVE-NGVVPSQIS 251
D+ + I Y+ LL+ C R +++A E+ + P +
Sbjct: 368 DALAIYREMKEKGLSLTVI---LYNTLLS-MCADNRYVDEAFEIFQDMKNCETCDPDSWT 423
Query: 252 YNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKML 311
++ L+ Y G V +A QM E G +P+ ++I + + +VD R ++L
Sbjct: 424 FSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVL 483
Query: 312 EKGIAP 317
E GI P
Sbjct: 484 ELGITP 489
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 106/243 (43%), Gaps = 18/243 (7%)
Query: 150 VITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP--GGFSRIVFDDDSACSNGNGSLR-- 205
VI YN + S + + ++ EM G P F+ I+ +C+ NG +
Sbjct: 175 VILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTII-----SCARQNGVPKRA 229
Query: 206 -------ANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNA 258
++ D T +A+++ + R G ++ A + + ++++ L+
Sbjct: 230 VEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRI 289
Query: 259 YCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPT 318
Y G + + E+M+ G+KP+ V +N LI+ QA+ K ++ G P
Sbjct: 290 YGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPN 349
Query: 319 LETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEI-VL 377
TY +L+ YGR I E+++KG+ VI Y +L++ +C D + +D +
Sbjct: 350 WSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLS-MCADNRYVDEAFEIF 408
Query: 378 GDM 380
DM
Sbjct: 409 QDM 411
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 80/174 (45%)
Query: 211 RIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQ 270
+ D T++ +++ + G ++A E K+ G P ++ +++AY G V+ A+
Sbjct: 207 KPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALS 266
Query: 271 TAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYG 330
++ + VTF+TLI + +G D ++M G+ P L YN LI+ G
Sbjct: 267 LYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMG 326
Query: 331 RISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
R + I +++ G PN +Y +L+ + R DA + +M +G
Sbjct: 327 RAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKG 380
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 109/243 (44%), Gaps = 21/243 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+ GV P++ NRL +++ +K+ + ++ D++ +G P+ +Y V A +
Sbjct: 306 MKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARY 365
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLH-RNLVPNTVTYN 119
D + M+++ + +V +YN +L R V +A ++F +M + P++ T++
Sbjct: 366 GDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFS 425
Query: 120 TLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN 179
+LI Y G + +A + +M+ EP++ ++ + +V+D ++
Sbjct: 426 SLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLEL 485
Query: 180 GFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAK 239
G P DD C G L NV + L +G +EKAK L +
Sbjct: 486 GITP---------DDRFC----GCL-LNVMTQTPSEEIGKL------IGCVEKAKPKLGQ 525
Query: 240 LVE 242
+V+
Sbjct: 526 VVK 528
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 165/394 (41%), Gaps = 48/394 (12%)
Query: 13 VNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCME 72
+N L L + +FE + F M+ G++PD +++ +++ L G L
Sbjct: 94 LNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATL 153
Query: 73 KERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEME 132
K V FV ++ K ++K A ++F+E R + + +N LI+GYC+ +M
Sbjct: 154 KNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMH 213
Query: 133 KAFSLKARMKAPNA---------------------------EPSVITYNCLLGGLCSSGR 165
A +L M N+ E +V+++ L+ G +G
Sbjct: 214 MATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGD 273
Query: 166 VNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANV---------AARIDERT 216
A EM G P ++ + SACS +G+L + + ++D
Sbjct: 274 YETAISTYFEMLEKGLKPNEYT--IAAVLSACSK-SGALGSGIRIHGYILDNGIKLDRAI 330
Query: 217 YSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQME 276
+AL++ + + G ++ A V + + + +S+ ++ + G +AIQ QM
Sbjct: 331 GTALVDMYAKCGELDCAATVFSNMNHKDI----LSWTAMIQGWAVHGRFHQAIQCFRQMM 386
Query: 277 ERGLKPSYVTFNTLINKFCETGEVDQAERWVKKM-LEKGIAPTLETYNSLINGYGRISNF 335
G KP V F ++ + EVD + M L+ I PTL+ Y +++ GR
Sbjct: 387 YSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKL 446
Query: 336 VKCFEILEEIEKKGMKPNVISYGSLINCLCKDRK 369
+ E++E + + P++ ++ +L CK K
Sbjct: 447 NEAHELVENMP---INPDLTTWAALYRA-CKAHK 476
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 159/374 (42%), Gaps = 28/374 (7%)
Query: 14 NRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEK 73
NRL L ++ +F M G+ + + +G + + ++ L+ ++K
Sbjct: 156 NRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKK 215
Query: 74 ERVGPS-VFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEM- 131
+ + + L+L LCK R DA + +E+ + + P+ + Y + + + G +
Sbjct: 216 ANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLY 275
Query: 132 EKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLP-------- 183
E+ LK + K A P Y + L S+ R+ +A+EV E+ +G P
Sbjct: 276 ERQVVLKKKRKLGVA-PRSSDYRAFILDLISAKRLTEAKEV-AEVIVSGKFPMDNDILDA 333
Query: 184 --GGFSRIVFDDDSACSN-----GNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEV 236
G S + D DSA G L A RT S L CR + + +
Sbjct: 334 LIGSVSAV--DPDSAVEFLVYMVSTGKLPAI-------RTLSKLSKNLCRHDKSDHLIKA 384
Query: 237 LAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCE 296
L G SY+++++ C G V ++ ++M++ GL P +N LI C+
Sbjct: 385 YELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCK 444
Query: 297 TGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVIS 356
+ A++ +M +G L TYN LI + + +++ ++G++P+
Sbjct: 445 AEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETI 504
Query: 357 YGSLINCLCKDRKL 370
Y SLI LCK+ K+
Sbjct: 505 YMSLIEGLCKETKI 518
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 6/205 (2%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G LP++R++++L + L + + ++ + + G ++ SY +
Sbjct: 353 MVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGR 412
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
+ + + + M+KE + P V +YN ++ CK ++ A+KL+DEM N TYN
Sbjct: 413 VRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNV 472
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVL---VEME 177
LI + GE E++ L +M EP Y L+ GLC ++ A EV +E +
Sbjct: 473 LIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERD 532
Query: 178 GNGFLPGGFSRIVFDDDSACSNGNG 202
S V + CSNG+
Sbjct: 533 HKTVTRRVLSEFVLN---LCSNGHS 554
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 167/389 (42%), Gaps = 26/389 (6%)
Query: 12 SVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELM--G 69
S + +F++L S+QF + A+F + + I D Y ++ V+ + F ++
Sbjct: 84 SYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEA 143
Query: 70 CMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVG 129
+ + P V N +L GL A+KLF +M H+ + NT+ + I +C+
Sbjct: 144 FSTGQEIHPDVC--NRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSS 201
Query: 130 EMEKAFSLKARMKAP--NAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
E + L +K N S+I +L LC R DA +L E+ P +
Sbjct: 202 ETNQLLRLVDEVKKANLNINGSIIAL-LILHSLCKCSREMDAFYILEELRNIDCKPDFMA 260
Query: 188 RIVFDDDSACSNGNGSLRANVAAR-----IDERT--YSALLNGFCRVGRIEKAKEVLAKL 240
V ++ GN R V + + R+ Y A + R+ +AKEV A++
Sbjct: 261 YRVI-AEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEV-AEV 318
Query: 241 VENGVVPSQISYNILVNAYCHEGYV-----EKAIQTAEQMEERGLKPSYVTFNTLINKFC 295
+ +G P N +++A G V + A++ M G P+ T + L C
Sbjct: 319 IVSGKFPMD---NDILDALI--GSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLC 373
Query: 296 ETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVI 355
+ D + + + KG L++Y+ +I+ + + + L+E++K+G+ P+V
Sbjct: 374 RHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVS 433
Query: 356 SYGSLINCLCKDRKLLDAEIVLGDMASRG 384
Y +LI CK + A+ + +M G
Sbjct: 434 LYNALIEACCKAEMIRPAKKLWDEMFVEG 462
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 73/162 (45%), Gaps = 29/162 (17%)
Query: 152 TYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAAR 211
+Y+ ++ LC +GRV ++ L EM+ G P
Sbjct: 399 SYSLMISFLCKAGRVRESYTALQEMKKEGLAP---------------------------- 430
Query: 212 IDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQT 271
D Y+AL+ C+ I AK++ ++ G + +YN+L+ EG E++++
Sbjct: 431 -DVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRL 489
Query: 272 AEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK 313
++M ERG++P + +LI C+ +++ A +K +E+
Sbjct: 490 FDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMER 531
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 133/299 (44%), Gaps = 71/299 (23%)
Query: 110 NLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDA 169
N+ +TV YN +I + G++ A L M P VITY ++ G C++G+++DA
Sbjct: 160 NVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDA 219
Query: 170 REVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGR 229
+ EM + + ++ TYS +L G C+ G
Sbjct: 220 WRLAKEMSKHDCV-----------------------------LNSVTYSRILEGVCKSGD 250
Query: 230 IEKAKEVLAKL-VENG---VVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYV 285
+E+A E+LA++ E+G + P+ ++Y +++ A+C + VE+A+ ++M RG P+ V
Sbjct: 251 MERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRV 310
Query: 286 T-----------------FNTLINKFCETGEV-------------------DQAERWVKK 309
T + LI+K + G V ++AE+ +
Sbjct: 311 TACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRL 370
Query: 310 MLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVIS--YGSLINCLCK 366
ML +G+ P + + + ++ CF + +EIEKK +K + S + L+ LC+
Sbjct: 371 MLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQ 429
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 148/330 (44%), Gaps = 19/330 (5%)
Query: 2 RKDGVLPSVRSVNRLFETLVGSKQF-EKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
RK+ +V+++ R+ TL ++ L V E + D V+Y + D
Sbjct: 122 RKEECFVNVKTM-RIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGD 180
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L+ L+ M+ + P V Y ++ G C ++ DA +L EM + V N+VTY+
Sbjct: 181 LNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSR 240
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNA----EPSVITYNCLLGGLCSSGRVNDAREVLVEM 176
+++G CK G+ME+A L A M+ + P+ +TY ++ C RV +A VL M
Sbjct: 241 ILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRM 300
Query: 177 EGNGFLPGGFSRIVF--------DDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVG 228
G +P + V +D A S L + E +S+ R+
Sbjct: 301 GNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSE-CFSSATVSLIRMK 359
Query: 229 RIEKAKEVLAKLVENGVVPSQISYNILVNAYC-HEGYVEKAIQTAEQMEERGLKPSYVT- 286
R E+A+++ ++ GV P ++ + + C E Y++ +++E++ +K + +
Sbjct: 360 RWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLD-CFLLYQEIEKKDVKSTIDSD 418
Query: 287 -FNTLINKFCETGEVDQAERWVKKMLEKGI 315
L+ C+ G +A + K ML+K +
Sbjct: 419 IHAVLLLGLCQQGNSWEAAKLAKSMLDKKM 448
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 85/158 (53%), Gaps = 4/158 (2%)
Query: 231 EKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTL 290
++A VL K E V ++YN+++ + +G + A ++M+ GL P +T+ ++
Sbjct: 147 DEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSM 206
Query: 291 INKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKG- 349
IN +C G++D A R K+M + TY+ ++ G + + + E+L E+EK+
Sbjct: 207 INGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDG 266
Query: 350 ---MKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ PN ++Y +I C+ R++ +A +VL M +RG
Sbjct: 267 GGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRG 304
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 162/356 (45%), Gaps = 45/356 (12%)
Query: 42 RPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARK 101
+ DV S+ + +K+ ++ EL+ ME+ V P+ LVL KV+ ++
Sbjct: 198 KEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKR 257
Query: 102 LFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPN--AEPSV--------- 150
+ + + P+ N L++ Y GEM+ A + MKA + + S+
Sbjct: 258 VHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGN 317
Query: 151 ----------------ITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDD 194
I++ ++ G +G N++ E+ EM+ G +P F+ +
Sbjct: 318 LKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSV--L 375
Query: 195 SACSN-GNGSLRANVAARIDERTY-------SALLNGFCRVGRIEKAKEVLAKLVENGVV 246
+AC++ G+ + + ID+ +AL++ + + G EKA++V + +
Sbjct: 376 TACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR--- 432
Query: 247 PSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERW 306
+ ++ +V + G ++AI+ QM++ ++P +T+ +++ +G VDQA ++
Sbjct: 433 -DKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKF 491
Query: 307 VKKML-EKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
KM + I P+L Y +++ GR + +EIL K M PN I +G+L+
Sbjct: 492 FAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEIL---RKMPMNPNSIVWGALL 544
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 117/277 (42%), Gaps = 46/277 (16%)
Query: 26 FEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSV----- 80
F + L +F +M +G+ PD + + A L L+ G + ++K ++ V
Sbjct: 349 FNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNA 408
Query: 81 --------------------------FVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPN 114
F + ++ GL + ++A K+F +M ++ P+
Sbjct: 409 LIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPD 468
Query: 115 TVTYNTLIDGYCKVGEMEKAFSLKARMKAPN-AEPSVITYNCLLGGLCSSGRVNDAREVL 173
+TY ++ G +++A A+M++ + EPS++ Y C++ L +G V +A E+L
Sbjct: 469 DITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEIL 528
Query: 174 --VEMEGNGFLPG---GFSRIVFDDDSACSNGNGSLRANVAARIDE---RTYSALLNGFC 225
+ M N + G G SR+ D+ A L A ++ Y+ L N +
Sbjct: 529 RKMPMNPNSIVWGALLGASRLHNDEPMA------ELAAKKILELEPDNGAVYALLCNIYA 582
Query: 226 RVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHE 262
R + +EV K+V+ + + I VN + HE
Sbjct: 583 GCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHE 619
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 143/324 (44%), Gaps = 50/324 (15%)
Query: 27 EKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLV 86
EK + V+ M G++PD V+ V + ML DL++G E +++ + ++ + N +
Sbjct: 239 EKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNAL 298
Query: 87 LGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNA 146
+ K + +AR++FD + R + V++ T+I GY + G ++ + L M+
Sbjct: 299 MDMFSKCGDIHEARRIFDNLEKRTI----VSWTTMISGYARCGLLDVSRKLFDDME---- 350
Query: 147 EPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSN------- 199
E V+ +N ++GG + R DA + EM+ + P + I SACS
Sbjct: 351 EKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMI--HCLSACSQLGALDVG 408
Query: 200 -----------------------------GNGSLRANVAARIDER---TYSALLNGFCRV 227
GN S +V I R TY+A++ G
Sbjct: 409 IWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALH 468
Query: 228 GRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEER-GLKPSYVT 286
G A ++++ G+ P +I++ L++A CH G ++ QM+ R L P
Sbjct: 469 GDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKH 528
Query: 287 FNTLINKFCETGEVDQAERWVKKM 310
++ +++ G +++A+R ++ M
Sbjct: 529 YSIMVDLLGRAGLLEEADRLMESM 552
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 166/365 (45%), Gaps = 23/365 (6%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGI---RPDVVSYGKAVEAAVMLKDLDKG 64
P++ S N S+ ++ ++ M+ G RPD +Y + L+ G
Sbjct: 116 PNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLG 175
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
++G + K R+ V+N + +++ARK+FDE R+L V++N LI+G
Sbjct: 176 HMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDL----VSWNCLING 231
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGF-LP 183
Y K+GE EKA + M++ +P +T L+ G +N +E ++ NG +
Sbjct: 232 YKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMT 291
Query: 184 GGFSRIVFDDDSACSNGNGSLRANVAARIDERT---YSALLNGFCRVGRIEKAKEVLAKL 240
+ D S C + + + R + +++RT ++ +++G+ R G ++ ++++ +
Sbjct: 292 IPLVNALMDMFSKCGDIHEARR--IFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDM 349
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
E VV +N ++ + A+ ++M+ KP +T ++ + G +
Sbjct: 350 EEKDVVL----WNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGAL 405
Query: 301 DQAERWVKKMLEK-GIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGS 359
D W+ + +EK ++ + SL++ Y + N + + I+ + N ++Y +
Sbjct: 406 DVG-IWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR----NSLTYTA 460
Query: 360 LINCL 364
+I L
Sbjct: 461 IIGGL 465
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 140/309 (45%), Gaps = 25/309 (8%)
Query: 79 SVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLK 138
S ++N +L L K + + +++ +M+ L+ + + LI +C + E +
Sbjct: 49 SFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLI-AFCALSE-SRYLDYS 106
Query: 139 ARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFL---PGGFSRIVF---- 191
++ P++ ++N + G S ++ + +M +G P F+ V
Sbjct: 107 VKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVC 166
Query: 192 DDDSACSNGNGSLRANVAARID--ERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQ 249
D S G+ L + R++ ++A ++ F G +E A++V + V
Sbjct: 167 ADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVF----DESPVRDL 222
Query: 250 ISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKK 309
+S+N L+N Y G EKAI + ME G+KP VT L++ G++++ + + +
Sbjct: 223 VSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEY 282
Query: 310 MLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCK--- 366
+ E G+ T+ N+L++ + + + + I + +EK+ ++S+ ++I+ +
Sbjct: 283 VKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKR----TIVSWTTMISGYARCGL 338
Query: 367 ---DRKLLD 372
RKL D
Sbjct: 339 LDVSRKLFD 347
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 107/266 (40%), Gaps = 11/266 (4%)
Query: 21 VGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSV 80
V +K+ + LA+F +M S +PD ++ + A L LD G + +EK + +V
Sbjct: 365 VQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNV 424
Query: 81 FVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKAR 140
+ ++ K + +A +F + R N++TY +I G G+ A S
Sbjct: 425 ALGTSLVDMYAKCGNISEALSVFHGIQTR----NSLTYTAIIGGLALHGDASTAISYFNE 480
Query: 141 MKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNG 200
M P IT+ LL C G + R+ +M+ L D G
Sbjct: 481 MIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAG 540
Query: 201 ----NGSLRANVAARIDERTYSALLNGFCRV-GRIEKAKEVLAKLVENGVVPSQISYNIL 255
L ++ D + ALL G CR+ G +E ++ KL+E S I Y +L
Sbjct: 541 LLEEADRLMESMPMEADAAVWGALLFG-CRMHGNVELGEKAAKKLLELDPSDSGI-YVLL 598
Query: 256 VNAYCHEGYVEKAIQTAEQMEERGLK 281
Y E A + M ERG++
Sbjct: 599 DGMYGEANMWEDAKRARRMMNERGVE 624
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 150/316 (47%), Gaps = 27/316 (8%)
Query: 27 EKVLAVFTDMVESG--IRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYN 84
E +++F DM+ S ++P ++Y +A L G +L G + KE + F+ N
Sbjct: 106 EMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRN 165
Query: 85 LVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAP 144
+L + +A ++F M+ ++V +N++I G+ K G +++A +L M
Sbjct: 166 TMLHMYVTCGCLIEAWRIFLGMIGFDVV----AWNSMIMGFAKCGLIDQAQNLFDEMPQR 221
Query: 145 NAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSL 204
N +++N ++ G +GR DA ++ EM+ P GF+ + + AC+ S
Sbjct: 222 NG----VSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLN--ACAYLGASE 275
Query: 205 RANVAAR--------IDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQIS-YNIL 255
+ ++ +AL++ +C+ G IE+ V Q+S +N +
Sbjct: 276 QGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVF-----ECAPKKQLSCWNSM 330
Query: 256 VNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK-G 314
+ + G+ E+A+ ++E GL+P V+F ++ +GEV +A+ + + M EK
Sbjct: 331 ILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYM 390
Query: 315 IAPTLETYNSLINGYG 330
I P+++ Y ++N G
Sbjct: 391 IEPSIKHYTLMVNVLG 406
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 127/294 (43%), Gaps = 25/294 (8%)
Query: 81 FVYNLVLGGLCKVRRVKDARKLFDEML--HRNLVPNTVTYNTLIDGYCKVGEMEKAFSLK 138
FV+N ++ G + + A +F +ML ++ P +TY ++ Y ++G+ L
Sbjct: 90 FVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLH 149
Query: 139 ARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG-----GFSRIVFDD 193
+ E N +L + G + +A + + M G + GF++ D
Sbjct: 150 GMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLID 209
Query: 194 DSACSNGNGSLRANVAARIDER---TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQI 250
+ N+ + +R +++++++GF R GR + A ++ ++ E V P
Sbjct: 210 QAQ----------NLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGF 259
Query: 251 SYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKM 310
+ L+NA + G E+ E + + + + LI+ +C+ G +++ +
Sbjct: 260 TMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEG----LNV 315
Query: 311 LEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISY-GSLINC 363
E L +NS+I G + ++ E+E+ G++P+ +S+ G L C
Sbjct: 316 FECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTAC 369
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 115/274 (41%), Gaps = 9/274 (3%)
Query: 12 SVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCM 71
S N + V + +F+ L +F +M E ++PD + + A L ++G + +
Sbjct: 225 SWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYI 284
Query: 72 EKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEM 131
+ R + V ++ CK +++ +F+ + L +N++I G G
Sbjct: 285 VRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLS----CWNSMILGLANNGFE 340
Query: 132 EKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVF 191
E+A L + ++ EP +++ +L SG V+ A E M+ +
Sbjct: 341 ERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTL 400
Query: 192 DDDSACSNG----NGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVP 247
+ G +L N+ D +S+LL+ ++G +E AK AK ++
Sbjct: 401 MVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRA-AKCLKKLDPD 459
Query: 248 SQISYNILVNAYCHEGYVEKAIQTAEQMEERGLK 281
Y +L NAY G E+A++ M+ER ++
Sbjct: 460 ETCGYVLLSNAYASYGLFEEAVEQRLLMKERQME 493
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 116/253 (45%), Gaps = 19/253 (7%)
Query: 117 TYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSS-GRVNDAREVLVE 175
TY LID C M + + A + +T + +L C+S +N A V
Sbjct: 26 TYLRLIDTQCST--MRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTR 83
Query: 176 M-EGNGFLPG----GFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRI 230
+ N F+ GFSR F + A S L ++ + + TY ++ + R+G+
Sbjct: 84 INHKNPFVWNTIIRGFSRSSFPE-MAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQA 142
Query: 231 EKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTL 290
+++ +++ G+ N +++ Y G + +A + M + V +N++
Sbjct: 143 RDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGM----IGFDVVAWNSM 198
Query: 291 INKFCETGEVDQAERWVKKMLEK-GIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKG 349
I F + G +DQA+ +M ++ G+ ++NS+I+G+ R F ++ E+++K
Sbjct: 199 IMGFAKCGLIDQAQNLFDEMPQRNGV-----SWNSMISGFVRNGRFKDALDMFREMQEKD 253
Query: 350 MKPNVISYGSLIN 362
+KP+ + SL+N
Sbjct: 254 VKPDGFTMVSLLN 266
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 109/237 (45%), Gaps = 42/237 (17%)
Query: 141 MKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNG 200
M+ N + YN ++ GLC +G+ ++A + + +G P
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQP----------------- 47
Query: 201 NGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYC 260
D +TY+ ++ F +GR EK + A+++ G+VP I+YN +++ C
Sbjct: 48 ------------DVQTYNMMIR-FSSLGRAEK---LYAEMIRRGLVPDTITYNSMIHGLC 91
Query: 261 HEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLE 320
+ + +A R + S TFNTLIN +C+ V +M +GI +
Sbjct: 92 KQNKLAQA---------RKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVI 142
Query: 321 TYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVL 377
TY +LI+G+ ++ +F +I +E+ G+ + I++ ++ LC ++L A +L
Sbjct: 143 TYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
MR+ + N + L + +F++ +FT+++ SG++PDV +Y +
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR----FSS 60
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L + +L M + + P YN ++ GLCK ++ ARK+ + T+NT
Sbjct: 61 LGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCSTFNT 111
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LI+GYCK ++ +L M +VITY L+ G G N A ++ EM NG
Sbjct: 112 LINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNG 171
Query: 181 FLPGGFSRIVFDD 193
S I F D
Sbjct: 172 VYS---SSITFRD 181
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G+ P V++ N ++ + ++ +M+ G+ PD ++Y M+ L K
Sbjct: 44 GLQPDVQTYN----MMIRFSSLGRAEKLYAEMIRRGLVPDTITYNS------MIHGLCKQ 93
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
+L + +V S +N ++ G CK RVKD LF EM R +V N +TY TLI G
Sbjct: 94 NKLA---QARKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHG 150
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVE 175
+ +VG+ A + M + S IT+ +L LCS + A +L++
Sbjct: 151 FRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAMLLQ 201
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 20/217 (9%)
Query: 102 LFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLC 161
+F M N+ +T YN +I G CK G+ ++A ++ + +P V TYN ++
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI-RFS 59
Query: 162 SSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDE-----RT 216
S GR A ++ EM G +P D + S +G + N A+ + T
Sbjct: 60 SLGR---AEKLYAEMIRRGLVP--------DTITYNSMIHGLCKQNKLAQARKVSKSCST 108
Query: 217 YSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQME 276
++ L+NG+C+ R++ + ++ G+V + I+Y L++ + G A+ ++M
Sbjct: 109 FNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMV 168
Query: 277 ERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK 313
G+ S +TF ++ + C E+ +A V +L+K
Sbjct: 169 SNGVYSSSITFRDILPQLCSRKELRKA---VAMLLQK 202
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 65/133 (48%), Gaps = 13/133 (9%)
Query: 252 YNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKML 311
YNI+++ C G ++A + GL+P T+N +I +F G +AE+ +M+
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI-RFSSLG---RAEKLYAEMI 72
Query: 312 EKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLL 371
+G+ P TYNS+I+G + + + + + + ++ +LIN CK ++
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLA---------QARKVSKSCSTFNTLINGYCKATRVK 123
Query: 372 DAEIVLGDMASRG 384
D + +M RG
Sbjct: 124 DGMNLFCEMYRRG 136
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 126/263 (47%), Gaps = 36/263 (13%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFE--KVLAVFTDMVESGIRPDVVSYGKAVEAAVML 58
M +D V+ R +RL ++ K V+ D+ ++ P + Y V++
Sbjct: 205 MSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDY------TVVM 258
Query: 59 KDLDKG------FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLV 112
+ L +G ++ M+ +RV P + Y +VL G+ A KLFDE+L L
Sbjct: 259 RFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLA 318
Query: 113 PNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREV 172
P+ TYN I+G CK ++E A + + M +EP+V+TYN L+ L +G ++ A+ +
Sbjct: 319 PDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTL 378
Query: 173 LVEMEGNGFLPGGFSRIVFD---------DDSACSNG--NGSLRANV---AARIDERTYS 218
EME NG + FD D+ C++G + NV ++RI+E
Sbjct: 379 WKEMETNGVNRNSHT---FDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEE---- 431
Query: 219 ALLNGFCRVGRIEKAKEVLAKLV 241
+++ C G +++A E+LA LV
Sbjct: 432 -VISRLCEKGLMDQAVELLAHLV 453
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 151/358 (42%), Gaps = 32/358 (8%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFT--------DMVESGIRPDVVSYGKAVEAAVMLK 59
P+ ++ + +TL S Q E + +V D ES R + +YG +
Sbjct: 70 PTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFS-------G 122
Query: 60 DLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHR----NLVPNT 115
+++ E+ + R PS + N +L L + R+ + +L E+L + +
Sbjct: 123 RIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQ---SLELVPEILVKACRMGVRLEE 179
Query: 116 VTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVN--DAREVL 173
T+ LID C++GE++ A L M + Y+ LL +C + D L
Sbjct: 180 STFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYL 239
Query: 174 VEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARI-------DERTYSALLNGFCR 226
++ F PG V G G +V ++ D Y+ +L G
Sbjct: 240 EDLRKTRFSPGLRDYTVVMR-FLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIA 298
Query: 227 VGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVT 286
KA ++ +L+ G+ P +YN+ +N C + +E A++ M + G +P+ VT
Sbjct: 299 DEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVT 358
Query: 287 FNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEE 344
+N LI + G++ +A+ K+M G+ T++ +I+ Y + V +LEE
Sbjct: 359 YNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEE 416
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 153/374 (40%), Gaps = 80/374 (21%)
Query: 53 EAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFD--EMLHRN 110
E A +++ L F+L C P+ Y V+ L K ++++ + E+ +
Sbjct: 51 ENASVMRTLLSSFQLHNC------EPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKF 104
Query: 111 LVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAE--PSVITYNCLLGGLCSSGR-VN 167
P ++ + +I Y G +E+A ++ K PN PS T N LL L + +
Sbjct: 105 DTPESI-FRDVIAAYGFSGRIEEA--IEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLE 161
Query: 168 DAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRV 227
E+LV+ AC G R++E T+ L++ CR+
Sbjct: 162 LVPEILVK--------------------ACRMG---------VRLEESTFGILIDALCRI 192
Query: 228 GRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHE---------GYVE------------ 266
G ++ A E++ + ++ V+ Y+ L+++ C GY+E
Sbjct: 193 GEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLR 252
Query: 267 ----------------KAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKM 310
+ + QM+ ++P V + ++ + +A++ ++
Sbjct: 253 DYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDEL 312
Query: 311 LEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKL 370
L G+AP + TYN ING + ++ +++ + K G +PNV++Y LI L K L
Sbjct: 313 LLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDL 372
Query: 371 LDAEIVLGDMASRG 384
A+ + +M + G
Sbjct: 373 SRAKTLWKEMETNG 386
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 156/344 (45%), Gaps = 27/344 (7%)
Query: 28 KVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVL 87
+ L VF M++SG+RPD +S A+ + L+++ G G + + + N ++
Sbjct: 320 EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379
Query: 88 GGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAE 147
K R A ++FD M ++ +V T+N+++ GY + GE++ A+ M E
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVV----TWNSIVAGYVENGEVDAAWETFETM----PE 431
Query: 148 PSVITYNCLLGGLCSSGRVNDAREVLVEMEGN-GFLPGGFSRIVFDDDSACSN-GNGSLR 205
+++++N ++ GL +A EV M+ G G + + SAC + G L
Sbjct: 432 KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIA--SACGHLGALDLA 489
Query: 206 ANV-------AARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNA 258
+ ++D R + L++ F R G E A + L V ++ + A
Sbjct: 490 KWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVS----AWTAAIGA 545
Query: 259 YCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLE-KGIAP 317
G E+AI+ + M E+GLKP V F + G V Q + ML+ G++P
Sbjct: 546 MAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSP 605
Query: 318 TLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
Y +++ GR + +++E++ M+PN + + SL+
Sbjct: 606 EDVHYGCMVDLLGRAGLLEEAVQLIEDMP---MEPNDVIWNSLL 646
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 153/375 (40%), Gaps = 54/375 (14%)
Query: 14 NRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEK 73
N L S + + +F M+ SGI PD ++ + A + G ++ G + K
Sbjct: 103 NSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVK 162
Query: 74 ERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEK 133
+FV N ++ + + ARK+FDEM RN+ V++ ++I GY + +
Sbjct: 163 MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV----VSWTSMICGYARRDFAKD 218
Query: 134 AFSLKARM-KAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFD 192
A L RM + P+ +T C++ + +V + +G
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALV 278
Query: 193 DDSACSNGNGSLRANVAARI-DERTYS------ALLNGFCRVGRIEKAKEVLAKLVENGV 245
D N +VA R+ DE S A+ + + R G +A V ++++GV
Sbjct: 279 DMYMKCNA-----IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV 333
Query: 246 VPSQISY-----------NILVNAYCHEGYVEK---------------------AIQTAE 273
P +IS NIL CH GYV + TA
Sbjct: 334 RPDRISMLSAISSCSQLRNILWGKSCH-GYVLRNGFESWDNICNALIDMYMKCHRQDTAF 392
Query: 274 QMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRIS 333
++ +R + VT+N+++ + E GEVD A + M EK I ++N++I+G + S
Sbjct: 393 RIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIV----SWNTIISGLVQGS 448
Query: 334 NFVKCFEILEEIEKK 348
F + E+ ++ +
Sbjct: 449 LFEEAIEVFCSMQSQ 463
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 27 EKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEK-ERVGPSVFVYNL 85
E+ + +F DM+E G++PD V++ A+ A + +G E+ M K V P Y
Sbjct: 553 ERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGC 612
Query: 86 VLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVG---EMEKAFSLKARMK 142
++ L + +++A +L ++M + PN V +N+L+ C+V EM + K ++
Sbjct: 613 MVDLLGRAGLLEEAVQLIEDM---PMEPNDVIWNSLL-AACRVQGNVEMAAYAAEKIQVL 668
Query: 143 APNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFL-PGGFSRI 189
AP S Y L S+GR ND +V + M+ G P G S I
Sbjct: 669 APERTGS---YVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSI 713
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 127/287 (44%), Gaps = 30/287 (10%)
Query: 92 KVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAP-NAEPSV 150
+V ++A+K+FDEM RN +++N L++ + + + + + EP V
Sbjct: 118 RVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDV 177
Query: 151 ITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAA 210
+YN L+ GLC G +A ++ E+E G P
Sbjct: 178 ASYNTLIKGLCGKGSFTEAVALIDEIENKGLKP--------------------------- 210
Query: 211 RIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQ 270
D T++ LL+ G+ E+ +++ A++VE V SYN + E E+ +
Sbjct: 211 --DHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVS 268
Query: 271 TAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYG 330
++++ LKP TF +I F G++D+A W K++ + G P +NSL+
Sbjct: 269 LFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAIC 328
Query: 331 RISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVL 377
+ + +E+ +EI K + + +++ L K K +AE ++
Sbjct: 329 KAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIV 375
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 124/288 (43%), Gaps = 38/288 (13%)
Query: 26 FEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVG-----PSV 80
FE VF +M E + +S+ + A V K F+L+ + KE G P V
Sbjct: 122 FENAQKVFDEMPERNCKRTALSFNALLNACVN----SKKFDLVEGIFKELPGKLSIEPDV 177
Query: 81 FVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKAR 140
YN ++ GLC +A L DE+ ++ L P+ +T+N L+ G+ E+ + AR
Sbjct: 178 ASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWAR 237
Query: 141 MKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNG 200
M N + + +YN L GL + + + +++GN P F
Sbjct: 238 MVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVF-------------- 283
Query: 201 NGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYC 260
T++A++ GF G++++A ++ +NG P + +N L+ A C
Sbjct: 284 ---------------TFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAIC 328
Query: 261 HEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVK 308
G +E A + +++ + L +++ + + D+AE V+
Sbjct: 329 KAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVE 376
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 83/174 (47%)
Query: 3 KDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLD 62
K + P V S N L + L G F + +A+ ++ G++PD +++ + + +
Sbjct: 170 KLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFE 229
Query: 63 KGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLI 122
+G ++ M ++ V + YN L GL + ++ LFD++ L P+ T+ +I
Sbjct: 230 EGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMI 289
Query: 123 DGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEM 176
G+ G++++A + ++ P +N LL +C +G + A E+ E+
Sbjct: 290 KGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEI 343
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 36/242 (14%)
Query: 12 SVNRLFETLVGSKQFEKVLAVFTDMV-ESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGC 70
S N L V SK+F+ V +F ++ + I PDV SY ++ + L+
Sbjct: 143 SFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDE 202
Query: 71 MEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGE 130
+E + + P +N++L + ++ +++ M+ +N+ + +YN + G +
Sbjct: 203 IENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENK 262
Query: 131 MEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIV 190
E+ SL ++K +P V T+ ++ G S G++++A E+E NG P F
Sbjct: 263 SEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKF---- 318
Query: 191 FDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKA----KEVLAK--LVENG 244
+++LL C+ G +E A KE+ AK LV+
Sbjct: 319 -------------------------VFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEA 353
Query: 245 VV 246
V+
Sbjct: 354 VL 355
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 162/351 (46%), Gaps = 37/351 (10%)
Query: 26 FEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNL 85
+ L + + SGI+ + S+ + A V + L + G +V + F+ N+
Sbjct: 160 LHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHG-----QVLVAGFLSNV 214
Query: 86 VLG-----GLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKAR 140
VL K +++ A++ FDEM V + + TLI GY K+G+ME A L
Sbjct: 215 VLSCSIIDAYAKCGQMESAKRCFDEMT----VKDIHIWTTLISGYAKLGDMEAAEKLFCE 270
Query: 141 MKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG--GFSRIVFDDDSACS 198
M P P +++ L+ G G N A ++ +M G P FS + S S
Sbjct: 271 M--PEKNP--VSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIAS 326
Query: 199 NGNGS------LRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISY 252
+G +R NV R + S+L++ + + G +E ++ V ++ ++ + +
Sbjct: 327 LRHGKEIHGYMIRTNV--RPNAIVISSLIDMYSKSGSLEASERVF-RICDDK--HDCVFW 381
Query: 253 NILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKM-L 311
N +++A G KA++ + M + ++P+ T ++N +G V++ RW + M +
Sbjct: 382 NTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTV 441
Query: 312 EKGIAPTLETYNSLINGYGRISNFVKCF-EILEEIEKKGMKPNVISYGSLI 361
+ GI P E Y LI+ GR CF E++ +IE+ +P+ + +++
Sbjct: 442 QHGIVPDQEHYACLIDLLGRAG----CFKELMRKIEEMPFEPDKHIWNAIL 488
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 132/306 (43%), Gaps = 22/306 (7%)
Query: 78 PSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSL 137
P+ + N ++G K + DA K+FD+M RNL ++N ++ GY K G + +A +
Sbjct: 80 PNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLY----SWNNMVSGYVKSGMLVRARVV 135
Query: 138 KARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG-----FLPGGFSRIVFD 192
M E V+++N ++ G G +++A E +G F G
Sbjct: 136 FDSM----PERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVK 191
Query: 193 DDSACSNGNGSLRANVAARIDERTYS-ALLNGFCRVGRIEKAKEVLAKLVENGVVPSQIS 251
N + VA + S ++++ + + G++E AK ++ V
Sbjct: 192 SRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMT----VKDIHI 247
Query: 252 YNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKML 311
+ L++ Y G +E A + +M E+ + V++ LI + G ++A +KM+
Sbjct: 248 WTTLISGYAKLGDMEAAEKLFCEMPEK----NPVSWTALIAGYVRQGSGNRALDLFRKMI 303
Query: 312 EKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLL 371
G+ P T++S + I++ EI + + ++PN I SLI+ K L
Sbjct: 304 ALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLE 363
Query: 372 DAEIVL 377
+E V
Sbjct: 364 ASERVF 369
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 156/344 (45%), Gaps = 27/344 (7%)
Query: 28 KVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVL 87
+ L VF M++SG+RPD +S A+ + L+++ G G + + + N ++
Sbjct: 320 EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379
Query: 88 GGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAE 147
K R A ++FD M ++ +V T+N+++ GY + GE++ A+ M E
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVV----TWNSIVAGYVENGEVDAAWETFETMP----E 431
Query: 148 PSVITYNCLLGGLCSSGRVNDAREVLVEMEGN-GFLPGGFSRIVFDDDSACSN-GNGSLR 205
+++++N ++ GL +A EV M+ G G + + SAC + G L
Sbjct: 432 KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIA--SACGHLGALDLA 489
Query: 206 ANV-------AARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNA 258
+ ++D R + L++ F R G E A + L V ++ + A
Sbjct: 490 KWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVS----AWTAAIGA 545
Query: 259 YCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLE-KGIAP 317
G E+AI+ + M E+GLKP V F + G V Q + ML+ G++P
Sbjct: 546 MAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSP 605
Query: 318 TLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
Y +++ GR + +++E++ M+PN + + SL+
Sbjct: 606 EDVHYGCMVDLLGRAGLLEEAVQLIEDMP---MEPNDVIWNSLL 646
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 153/375 (40%), Gaps = 54/375 (14%)
Query: 14 NRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEK 73
N L S + + +F M+ SGI PD ++ + A + G ++ G + K
Sbjct: 103 NSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVK 162
Query: 74 ERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEK 133
+FV N ++ + + ARK+FDEM RN+ V++ ++I GY + +
Sbjct: 163 MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV----VSWTSMICGYARRDFAKD 218
Query: 134 AFSLKARM-KAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFD 192
A L RM + P+ +T C++ + +V + +G
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALV 278
Query: 193 DDSACSNGNGSLRANVAARI-DERTYS------ALLNGFCRVGRIEKAKEVLAKLVENGV 245
D N +VA R+ DE S A+ + + R G +A V ++++GV
Sbjct: 279 DMYMKCNA-----IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV 333
Query: 246 VPSQISY-----------NILVNAYCHEGYVEK---------------------AIQTAE 273
P +IS NIL CH GYV + TA
Sbjct: 334 RPDRISMLSAISSCSQLRNILWGKSCH-GYVLRNGFESWDNICNALIDMYMKCHRQDTAF 392
Query: 274 QMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRIS 333
++ +R + VT+N+++ + E GEVD A + M EK I ++N++I+G + S
Sbjct: 393 RIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIV----SWNTIISGLVQGS 448
Query: 334 NFVKCFEILEEIEKK 348
F + E+ ++ +
Sbjct: 449 LFEEAIEVFCSMQSQ 463
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 27 EKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEK-ERVGPSVFVYNL 85
E+ + +F DM+E G++PD V++ A+ A + +G E+ M K V P Y
Sbjct: 553 ERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGC 612
Query: 86 VLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVG---EMEKAFSLKARMK 142
++ L + +++A +L ++M + PN V +N+L+ C+V EM + K ++
Sbjct: 613 MVDLLGRAGLLEEAVQLIEDM---PMEPNDVIWNSLL-AACRVQGNVEMAAYAAEKIQVL 668
Query: 143 APNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFL-PGGFSRI 189
AP S Y L S+GR ND +V + M+ G P G S I
Sbjct: 669 APERTGS---YVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSI 713
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 86/162 (53%), Gaps = 9/162 (5%)
Query: 216 TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAE-- 273
TY+ L+ G + G + A+E+ ++V +GV P ++YNIL++ C G +EKA+ +
Sbjct: 18 TYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVE 77
Query: 274 -------QMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLI 326
+ +G+KP+ VT+ T+I+ FC+ G ++A +KM E G P TYN+LI
Sbjct: 78 DGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLI 137
Query: 327 NGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDR 368
+ R + E+++E+ + +YG + + L R
Sbjct: 138 RAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGR 179
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 21/203 (10%)
Query: 101 KLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGL 160
+LF EM R LV NTVTY TLI G + G+ + A + M + P ++TYN LL GL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 161 CSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSAL 220
C +G++ A LV G + G+ D CS ++ NV TY+ +
Sbjct: 62 CKNGKLEKA---LVA----GKVEDGW-------DLFCSLSLKGVKPNVV------TYTTM 101
Query: 221 LNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGL 280
++GFC+ G E+A + K+ E+G +P +YN L+ A+ +G + + ++M
Sbjct: 102 ISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRF 161
Query: 281 KPSYVTFNTLINKFCETGEVDQA 303
T+ L+ G +D+
Sbjct: 162 AGDASTYG-LVTDMLHDGRLDKG 183
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 9/156 (5%)
Query: 30 LAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGG 89
+ +F +M + G+ + V+Y ++ D D E+ M + V P + YN++L G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 90 LCK---------VRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKAR 140
LCK +V+D LF + + + PN VTY T+I G+CK G E+A++L +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 141 MKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEM 176
MK P TYN L+ G + E++ EM
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 9/102 (8%)
Query: 274 QMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRIS 333
+M +RGL + VT+ TLI + G+ D A+ K+M+ G+ P + TYN L++G +
Sbjct: 6 EMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNG 65
Query: 334 NFVKC---------FEILEEIEKKGMKPNVISYGSLINCLCK 366
K +++ + KG+KPNV++Y ++I+ CK
Sbjct: 66 KLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCK 107
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 85/177 (48%), Gaps = 12/177 (6%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSY----------GK 50
M + G++ + + L + L + + +F +MV G+ PD+++Y GK
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 51 AVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRN 110
+E A++ ++ G++L + + V P+V Y ++ G CK ++A LF +M
Sbjct: 67 -LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDG 125
Query: 111 LVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVN 167
+P++ TYNTLI + + G+ + L M++ TY L+ + GR++
Sbjct: 126 PLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-LVTDMLHDGRLD 181
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 78/152 (51%), Gaps = 10/152 (6%)
Query: 235 EVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKF 294
E+ ++ + G+V + ++Y L+ G + A + ++M G+ P +T+N L++
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 295 CETGEVDQA-------ERW--VKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEI 345
C+ G++++A + W + KG+ P + TY ++I+G+ + + + + ++
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 346 EKKGMKPNVISYGSLINCLCKD-RKLLDAEIV 376
++ G P+ +Y +LI +D K AE++
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELI 153
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 167/373 (44%), Gaps = 34/373 (9%)
Query: 9 SVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELM 68
S ++ R F K + + M + + P+ ++ ++A + +G ++
Sbjct: 92 SWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIH 151
Query: 69 GCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLF-DEMLHRNLVPNT---------VTY 118
G K G FV + ++ +KDAR LF ++ +++V T V +
Sbjct: 152 GLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLW 211
Query: 119 NTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEG 178
N +IDGY ++G+ + A L +M+ + SV+++N ++ G +G DA EV EM+
Sbjct: 212 NVMIDGYMRLGDCKAARMLFDKMR----QRSVVSWNTMISGYSLNGFFKDAVEVFREMKK 267
Query: 179 NGFLPGGFSRIVFDDDSACSNGNGSLR---------ANVAARIDERTYSALLNGFCRVGR 229
P + + + GSL + RID+ SAL++ + + G
Sbjct: 268 GDIRPNYVTLVSV---LPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGI 324
Query: 230 IEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNT 289
IEKA V +L V I+++ ++N + G AI +M + G++PS V +
Sbjct: 325 IEKAIHVFERLPRENV----ITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYIN 380
Query: 290 LINKFCETGEVDQAERWVKKMLE-KGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKK 348
L+ G V++ R+ +M+ G+ P +E Y +++ GR S + E E I
Sbjct: 381 LLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGR-SGLLD--EAEEFILNM 437
Query: 349 GMKPNVISYGSLI 361
+KP+ + + +L+
Sbjct: 438 PIKPDDVIWKALL 450
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 150/320 (46%), Gaps = 28/320 (8%)
Query: 38 ESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVK 97
E G +VVS+ + + ++ +L M+++ V P+ F Y+++L L V
Sbjct: 355 EIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL----PVI 410
Query: 98 DARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLL 157
++ +++ N ++ L+D Y K+G++E+A A++ + + ++ ++ +L
Sbjct: 411 SPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEA----AKVFSGIDDKDIVAWSAML 466
Query: 158 GGLCSSGRVNDAREVLVEMEGNGFLPG--GFSRIVFDDDSACSNGNGSLRAN-------V 208
G +G A ++ E+ G P FS I+ + C+ N S+ +
Sbjct: 467 AGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSIL----NVCAATNASMGQGKQFHGFAI 522
Query: 209 AARIDER--TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVE 266
+R+D SALL + + G IE A+EV + E +V S+N +++ Y G
Sbjct: 523 KSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLV----SWNSMISGYAQHGQAM 578
Query: 267 KAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK-GIAPTLETYNSL 325
KA+ ++M++R +K VTF + G V++ E++ M+ IAPT E + +
Sbjct: 579 KALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCM 638
Query: 326 INGYGRISNFVKCFEILEEI 345
++ Y R K +++E +
Sbjct: 639 VDLYSRAGQLEKAMKVIENM 658
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 127/269 (47%), Gaps = 26/269 (9%)
Query: 98 DARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLL 157
DA +LF E+ V N V++ +I G+ + E+A L + MK P+ TY+ +L
Sbjct: 348 DALRLFKEI---GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL 404
Query: 158 GGL--CSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDER 215
L S V+ A+ V E + + D+ G A V + ID++
Sbjct: 405 TALPVISPSEVH-AQVVKTNYERSSTVGTALL------DAYVKLGKVEEAAKVFSGIDDK 457
Query: 216 ---TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTA 272
+SA+L G+ + G E A ++ +L + G+ P++ +++ ++N C ++
Sbjct: 458 DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNV-C--AATNASMGQG 514
Query: 273 EQMEERGLKP----SYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLING 328
+Q +K S + L+ + + G ++ AE K+ EK + ++NS+I+G
Sbjct: 515 KQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLV----SWNSMISG 570
Query: 329 YGRISNFVKCFEILEEIEKKGMKPNVISY 357
Y + +K ++ +E++K+ +K + +++
Sbjct: 571 YAQHGQAMKALDVFKEMKKRKVKMDGVTF 599
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/347 (19%), Positives = 154/347 (44%), Gaps = 31/347 (8%)
Query: 27 EKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLV 86
++VL +F M G +P+ ++ A+ +G ++ + K + ++ V N +
Sbjct: 176 DEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSL 235
Query: 87 LGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNA 146
+ K V+ AR LFD + V + VT+N++I GY G +A + M+
Sbjct: 236 INLYLKCGNVRKARILFD----KTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYV 291
Query: 147 EPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDD---------SAC 197
S ++ ++ + + ++ + GFL FD + S C
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFL--------FDQNIRTALMVAYSKC 343
Query: 198 SNGNGSLR--ANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNIL 255
+ +LR + + +++A+++GF + E+A ++ +++ GV P++ +Y+++
Sbjct: 344 TAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVI 403
Query: 256 VNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGI 315
+ A E Q + ER S L++ + + G+V++A + + +K I
Sbjct: 404 LTALPVISPSEVHAQVVKTNYER----SSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDI 459
Query: 316 APTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLIN 362
+++++ GY + ++ E+ K G+KPN ++ S++N
Sbjct: 460 V----AWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILN 502
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 119/288 (41%), Gaps = 40/288 (13%)
Query: 97 KDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCL 156
KD RK+FDEM RN+V T+ TLI GY + ++ +L RM+ +P+ T+
Sbjct: 145 KDGRKVFDEMKERNVV----TWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAA 200
Query: 157 LGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERT 216
LG L G +V + NG D SN
Sbjct: 201 LGVLAEEGVGGRGLQVHTVVVKNG----------LDKTIPVSN----------------- 233
Query: 217 YSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQME 276
+L+N + + G + KA+ L + V S +++N +++ Y G +A+ M
Sbjct: 234 --SLINLYLKCGNVRKAR----ILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR 287
Query: 277 ERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFV 336
++ S +F ++I E+ E+ +++ G +L+ Y + + +
Sbjct: 288 LNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAML 347
Query: 337 KCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ +EI G NV+S+ ++I+ ++ +A + +M +G
Sbjct: 348 DALRLFKEI---GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 91/171 (53%), Gaps = 1/171 (0%)
Query: 215 RTYSALLNGFCRVGRIEKAKEVLAKLVEN-GVVPSQISYNILVNAYCHEGYVEKAIQTAE 273
++++ALL+ + ++++A + +L E G+ P ++YN ++ A C +G ++ + E
Sbjct: 158 KSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFE 217
Query: 274 QMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRIS 333
++E+ G +P ++FNTL+ +F + +R M K ++P + +YNS + G R
Sbjct: 218 ELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNK 277
Query: 334 NFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
F +++ ++ +G+ P+V +Y +LI D L + +M +G
Sbjct: 278 KFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKG 328
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 15/216 (6%)
Query: 99 ARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAF-SLKARMKAPNAEPSVITYNCLL 157
A KLFDEM N ++N L+ Y ++++A + K + P ++TYN ++
Sbjct: 141 AHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMI 200
Query: 158 GGLCSSGRVNDAREVLVEMEGNGFLPGGFS----------RIVFDDDSACSNGNGSLRAN 207
LC G ++D + E+E NGF P S R +F + + S N
Sbjct: 201 KALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKS--KN 258
Query: 208 VAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEK 267
++ I R+Y++ + G R + A ++ + G+ P +YN L+ AY + +E+
Sbjct: 259 LSPNI--RSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEE 316
Query: 268 AIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQA 303
++ +M+E+GL P VT+ LI C+ G++D+A
Sbjct: 317 VMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRA 352
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 127/288 (44%), Gaps = 50/288 (17%)
Query: 93 VRRVKDARKL------------FDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKAR 140
+RR+++A+K FD++ + V + L+ GY G E A L
Sbjct: 94 IRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIM----LLYGYS--GMAEHAHKLFDE 147
Query: 141 MKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEM-EGNGFLPGGFSRIVFDDDSACSN 199
M N E +V ++N LL +S ++++A + E+ E G P
Sbjct: 148 MPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITP---------------- 191
Query: 200 GNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNA- 258
D TY+ ++ CR G ++ + +L +NG P IS+N L+
Sbjct: 192 -------------DLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEF 238
Query: 259 YCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPT 318
Y E +VE + + M+ + L P+ ++N+ + + A + M +GI+P
Sbjct: 239 YRRELFVE-GDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPD 297
Query: 319 LETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCK 366
+ TYN+LI Y +N + + E+++KG+ P+ ++Y LI LCK
Sbjct: 298 VHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCK 345
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 109/263 (41%), Gaps = 30/263 (11%)
Query: 9 SVRSVNRLFETLVGSKQFEKVLAVFTDMVES-GIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
+V+S N L V SK+ ++ + F ++ E GI PD+V+Y ++A +D +
Sbjct: 156 TVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSI 215
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
+EK P + +N +L + + +++D M +NL PN +YN+ + G +
Sbjct: 216 FEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTR 275
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
+ A +L MK P V TYN L+ + + + EM+ G P
Sbjct: 276 NKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTP---- 331
Query: 188 RIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVP 247
D TY L+ C+ G +++A EV + +++ ++
Sbjct: 332 -------------------------DTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLS 366
Query: 248 SQISYNILVNAYCHEGYVEKAIQ 270
Y +V G +++A Q
Sbjct: 367 RPNMYKPVVERLMGAGKIDEATQ 389
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 81/171 (47%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
G+ P + + N + + L + +L++F ++ ++G PD++S+ +E + +G
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEG 247
Query: 65 FELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDG 124
+ M+ + + P++ YN + GL + ++ DA L D M + P+ TYN LI
Sbjct: 248 DRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITA 307
Query: 125 YCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVE 175
Y +E+ MK P +TY L+ LC G ++ A EV E
Sbjct: 308 YRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEE 358
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
+ K+G P + S N L E + F + ++ M + P++ SY V K
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
L+ M+ E + P V YN ++ +++ K ++EM + L P+TVTY
Sbjct: 279 FTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCM 338
Query: 121 LIDGYCKVGEMEKAFSLKAR------MKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLV 174
LI CK G++++A + + PN Y ++ L +G++++A +++
Sbjct: 339 LIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNM------YKPVVERLMGAGKIDEATQLV- 391
Query: 175 EMEGNGFLPGGF 186
NG L F
Sbjct: 392 ---KNGKLQSYF 400
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 106/248 (42%), Gaps = 29/248 (11%)
Query: 80 VFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKA 139
VF YN ++ L K + + EM+ R + PN T N + +CK G +++A L
Sbjct: 357 VFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYR 416
Query: 140 RMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSN 199
P+ ++YN L+ LC++ V A +VL G GG
Sbjct: 417 SRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGG-------------- 462
Query: 200 GNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAY 259
+T+S L N C G+ + A+E++ E ++P +I+ +++A
Sbjct: 463 ---------------KTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISAL 507
Query: 260 CHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTL 319
C G VE A+ E + G+ S+ F +LI D A + + +M EKG PT
Sbjct: 508 CDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTR 567
Query: 320 ETYNSLIN 327
Y ++I
Sbjct: 568 SLYRNVIQ 575
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 107/278 (38%), Gaps = 30/278 (10%)
Query: 85 LVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKA- 143
+++ LC R+ ++A KL DE+ V YN I K G + ++
Sbjct: 291 ILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPL 350
Query: 144 PNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGS 203
E V YN ++ L ++ ++L EM G P
Sbjct: 351 EGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSP-------------------- 390
Query: 204 LRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEG 263
+++T +A L FC+ G +++A E+ E G P+ +SYN L++ C
Sbjct: 391 ---------NKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANE 441
Query: 264 YVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYN 323
VE+A + +RG TF+TL N C G+ D A V E+ + P
Sbjct: 442 SVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGC 501
Query: 324 SLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
+I+ + I E K G+ + + SLI
Sbjct: 502 KIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLI 539
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/359 (18%), Positives = 152/359 (42%), Gaps = 18/359 (5%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG 64
GV P+ +++N + ++ L ++ E G P +SY + + +++
Sbjct: 387 GVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQA 446
Query: 65 FELM-GCMEK-ERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLI 122
++++ G +++ +G F + + LC + AR+L R+L+P + +I
Sbjct: 447 YDVLKGAIDRGHFLGGKTF--STLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKII 504
Query: 123 DGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFL 182
C VG++E A + + S + L+ G + R + A ++++ M+ G+
Sbjct: 505 SALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYT 564
Query: 183 PGGFSRIVFDDDSACSNGNGSLRANVAARIDE----------RTYSALLNGFCRVGRIEK 232
P +R ++ + C S N + + + Y+ + G G+ +
Sbjct: 565 P---TRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKL 621
Query: 233 AKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLIN 292
A+ V + +G+ P+ S +++ +Y + A+ + E+G K + +I
Sbjct: 622 ARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQG-KTKKRLYQVMIV 680
Query: 293 KFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMK 351
C+ ++D A ++++M +G+ P++E Y I + + ++ E K G +
Sbjct: 681 GLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRR 739
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 123/306 (40%), Gaps = 33/306 (10%)
Query: 62 DKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTL 121
D + G M + F Y+++L L + + +FD++ R V VT++ L
Sbjct: 199 DIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGFVC-AVTHSIL 257
Query: 122 IDGYCKVGEMEKAFSLKARMKAPNAEPSVIT-YNCLLGGLCSSGRVNDAREVLVEMEGNG 180
+ +CK G++++A R PN + L+ LCS + +A ++L E++ G
Sbjct: 258 VKKFCKQGKLDEAEDY-LRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVG 316
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
N+ +R Y+ + + G + + L K+
Sbjct: 317 ------------------------TVNM-----DRAYNIWIRALIKAGFLNNPADFLQKI 347
Query: 241 VE-NGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGE 299
G YN +V E ++ +M RG+ P+ T N + FC+ G
Sbjct: 348 SPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGF 407
Query: 300 VDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGS 359
VD+A + E G APT +YN LI+ + + +++L+ +G ++ +
Sbjct: 408 VDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFST 467
Query: 360 LINCLC 365
L N LC
Sbjct: 468 LTNALC 473
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 144/342 (42%), Gaps = 24/342 (7%)
Query: 52 VEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNL 111
VE A+M+ +L K V S ++ ++ G + R A KL M +
Sbjct: 513 VEDALMINEL---------FNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGY 563
Query: 112 VPNTVTYNTLIDGYCKVGEMEKAF-SLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAR 170
P Y +I C++ EK F + + + E V YN + G +G+ AR
Sbjct: 564 TPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLAR 623
Query: 171 EVLVEMEGNGFLPGGFSRIVF-------DDDSACSNGNGSLRANVAARIDERTYSALLNG 223
V M+ +G P S I+ + + + LR + +R Y ++ G
Sbjct: 624 LVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQ--GKTKKRLYQVMIVG 681
Query: 224 FCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPS 283
C+ +++ A L ++ G+ PS Y + + C+E ++A+ + + G + +
Sbjct: 682 LCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRIT 741
Query: 284 YVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGY-GRISNFVKCFEIL 342
N L++ ++ V +A W + + P +++ LI + GRI V+ + L
Sbjct: 742 AFIGNVLLHNAMKSKGVYEA--WTRMRNIEDKIPEMKSLGELIGLFSGRIDMEVE-LKRL 798
Query: 343 EEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+E+ +K ++ +Y L+ + ++ DA ++ +A RG
Sbjct: 799 DEVIEKCYPLDMYTYNMLLRMIVMNQA-EDAYEMVERIARRG 839
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 173/375 (46%), Gaps = 30/375 (8%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M G+ ++ S N + S ++ + +F + G PD V+ + + +
Sbjct: 208 MESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEM 267
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFD--EMLHRNLVPNTVTY 118
L+ G + G + K+ + V + ++ K V LF+ EM+ +
Sbjct: 268 LNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVC------ 321
Query: 119 NTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEG 178
N I G + G ++KA + K E +V+++ ++ G +G+ +A E+ EM+
Sbjct: 322 NAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQV 381
Query: 179 NGFLPGGFSRIVFDDDSACSN----GNGSLRANVAARI----DERTYSALLNGFCRVGRI 230
G P + + AC N G+G A R+ + SAL++ + + GRI
Sbjct: 382 AGVKPNHVT--IPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRI 439
Query: 231 EKAKEVLAKLVENGVVPSQ--ISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFN 288
L+++V N ++P++ + +N L+N + G ++ + E + LKP +++F
Sbjct: 440 N-----LSQIVFN-MMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFT 493
Query: 289 TLINKFCETGEVDQAERWVKKMLEK-GIAPTLETYNSLINGYGRISNFVKCFEILEEIEK 347
+L++ + G D+ ++ K M E+ GI P LE Y+ ++N GR + +++++E+
Sbjct: 494 SLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMP- 552
Query: 348 KGMKPNVISYGSLIN 362
+P+ +G+L+N
Sbjct: 553 --FEPDSCVWGALLN 565
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/356 (19%), Positives = 148/356 (41%), Gaps = 41/356 (11%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P++ S + L L +K F + + VF+ M G+ PD + L G ++
Sbjct: 79 PTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQI 138
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
+ FV + + R+ DARK+FD M +++ VT + L+ Y +
Sbjct: 139 HCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDV----VTCSALLCAYAR 194
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
G +E+ + + M++ E +++++N +L G SG +A + ++ GF P
Sbjct: 195 KGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCP---- 250
Query: 188 RIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVP 247
D+ T S++L + + + +++ G++
Sbjct: 251 -------------------------DQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLK 285
Query: 248 SQISYNILVNAYCHEGYVEKAIQTAEQME--ERGLKPSYVTFNTLINKFCETGEVDQAER 305
+ + +++ Y G+V I Q E E G+ +Y+T G VD+A
Sbjct: 286 DKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYIT------GLSRNGLVDKALE 339
Query: 306 WVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
+ E+ + + ++ S+I G + ++ E+ E++ G+KPN ++ S++
Sbjct: 340 MFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 153/358 (42%), Gaps = 49/358 (13%)
Query: 28 KVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKE--RVGPSVFVYNL 85
+ L +F+ M + ++PD V+ + A L+DL +G + + K + P + +
Sbjct: 205 EALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLN 264
Query: 86 VLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPN 145
+ C +V A+ LFD+M PN + +N +I GY K G +A + M +
Sbjct: 265 TMYAKCG--QVATAKILFDKM----KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD 318
Query: 146 AEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLR 205
P I+ + G + AR + E G R + DD S
Sbjct: 319 VRPDTISITSAISACAQVGSLEQARS-MYEYVG---------RSDYRDDVFIS------- 361
Query: 206 ANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYV 265
SAL++ F + G +E A+ V + ++ VV ++ ++ Y G
Sbjct: 362 ------------SALIDMFAKCGSVEGARLVFDRTLDRDVV----VWSAMIVGYGLHGRA 405
Query: 266 EKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSL 325
+AI ME G+ P+ VTF L+ +G V + + +M + I P + Y +
Sbjct: 406 REAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACV 465
Query: 326 INGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASR 383
I+ GR + + +E+++ + ++P V +G+L++ K R + LG+ A++
Sbjct: 466 IDLLGRAGHLDQAYEVIKCMP---VQPGVTVWGALLSACKKHR-----HVELGEYAAQ 515
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 125/278 (44%), Gaps = 32/278 (11%)
Query: 99 ARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLG 158
AR++FD++ + P +N +I GY + + A + + M+ P T+ LL
Sbjct: 72 ARQVFDDLPRPQIFP----WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLK 127
Query: 159 GLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANV----AAR--- 211
CS L ++ F+ R+ FD D NG +L A +AR
Sbjct: 128 A-CSG---------LSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVF 177
Query: 212 ----IDERT---YSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGY 264
+ ERT ++A+++ + + G +A E+ +++ + V P ++ ++NA+
Sbjct: 178 EGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQD 237
Query: 265 VEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNS 324
+++ + + GL+ +L + + G+V A K + +K +P L +N+
Sbjct: 238 LKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA----KILFDKMKSPNLILWNA 293
Query: 325 LINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLIN 362
+I+GY + + ++ E+ K ++P+ IS S I+
Sbjct: 294 MISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAIS 331
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 165/391 (42%), Gaps = 32/391 (8%)
Query: 3 KDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLD 62
K+ + P++ +N L V S L V+ +M + D+ SY ++ + +D
Sbjct: 295 KENIKPNIYVINSLMN--VNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVD 352
Query: 63 KGFELMGCMEKERVGPS------VFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTV 116
++ E +R+ S F Y ++ + K A K+ D+M + PNT
Sbjct: 353 LAQDIYK--EAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTH 410
Query: 117 TYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEM 176
T+++LI G +E+A L M A EP+ +N LL + + + A +
Sbjct: 411 TWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSW 470
Query: 177 EGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEV 236
+G+ ++ D S G R + + +L+N I+ +K
Sbjct: 471 KGSSVNESLYA------DDIVSKG----RTSSPNILKNNGPGSLVNRNSNSPYIQASKRF 520
Query: 237 LAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCE 296
K P+ +YNIL+ A C Y + + ++M+ GL P+ +T++TLI+
Sbjct: 521 CFK-------PTTATYNILLKA-CGTDYY-RGKELMDEMKSLGLSPNQITWSTLIDMCGG 571
Query: 297 TGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVIS 356
+G+V+ A R ++ M G P + Y + I F + EE+ + +KPN ++
Sbjct: 572 SGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVT 631
Query: 357 YGSLINCLCKDRKLLDAEIVLG---DMASRG 384
Y +L+ K LL+ L DM + G
Sbjct: 632 YNTLLKARSKYGSLLEVRQCLAIYQDMRNAG 662
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 3/130 (2%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+ G+ P+ + + L + GS E + + M +G RPDVV+Y A++ K
Sbjct: 550 MKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKC 609
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARK---LFDEMLHRNLVPNTVT 117
L F L M + ++ P+ YN +L K + + R+ ++ +M + PN
Sbjct: 610 LKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHF 669
Query: 118 YNTLIDGYCK 127
LI+ +C+
Sbjct: 670 LKELIEEWCE 679
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 167/381 (43%), Gaps = 66/381 (17%)
Query: 11 RSVNRLFETLVGSKQFEK-VLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMG 69
R ++++E L+ +K+ ++ +++ T V G + S + VE+ K L F
Sbjct: 122 RKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLVPDFFDTA 181
Query: 70 CMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLH--------------------- 108
C +N +L LC+ + + DAR ++ + H
Sbjct: 182 C------------FNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEE 229
Query: 109 ----------RNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLG 158
+ L P+ VTYN+LID YCK E+EKA+ L +M+ P VITY ++G
Sbjct: 230 AEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIG 289
Query: 159 GLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAAR-IDE--- 214
GL G+ + AREVL EM+ G P V ++A N + R A + +DE
Sbjct: 290 GLGLIGQPDKAREVLKEMKEYGCYPD-----VAAYNAAIRNFCIARRLGDADKLVDEMVK 344
Query: 215 -------RTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEK 267
TY+ + ++ E+ +++ N +P+ S L+ + V+
Sbjct: 345 KGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDM 404
Query: 268 AIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYN---- 323
A++ E M +G + + L++ C+ +V++AE+ + +M+EKG P+ ++
Sbjct: 405 AMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKL 464
Query: 324 --SLINGYGRISNFVKCFEIL 342
L N + ++N ++ I
Sbjct: 465 LMELANKHDEVNNLIQKMAIF 485
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 98/173 (56%), Gaps = 4/173 (2%)
Query: 212 IDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQT 271
D ++ALL C+ + A+ V L ++ P ++NIL++ + E+A
Sbjct: 178 FDTACFNALLRTLCQEKSMTDARNVYHSL-KHQFQPDLQTFNILLSGW---KSSEEAEAF 233
Query: 272 AEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGR 331
E+M+ +GLKP VT+N+LI+ +C+ E+++A + + KM E+ P + TY ++I G G
Sbjct: 234 FEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGL 293
Query: 332 ISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
I K E+L+E+++ G P+V +Y + I C R+L DA+ ++ +M +G
Sbjct: 294 IGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKG 346
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 140/333 (42%), Gaps = 45/333 (13%)
Query: 59 KDLDKGFELM-GCMEKERVGPSVFVYNLVLG---GLCKVRRVKDARKLFDEMLHRNLVPN 114
+ D+ +EL+ K+R S +VLG LC VR+ ++ F + LVP+
Sbjct: 122 RKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKF-----KRLVPD 176
Query: 115 ---TVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDARE 171
T +N L+ C+ M A ++ +K +P + T+N LL G +A
Sbjct: 177 FFDTACFNALLRTLCQEKSMTDARNVYHSLKH-QFQPDLQTFNILLSGW---KSSEEAEA 232
Query: 172 VLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIE 231
EM+G G P D TY++L++ +C+ IE
Sbjct: 233 FFEEMKGKGLKP-----------------------------DVVTYNSLIDVYCKDREIE 263
Query: 232 KAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLI 291
KA +++ K+ E P I+Y ++ G +KA + ++M+E G P +N I
Sbjct: 264 KAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAI 323
Query: 292 NKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMK 351
FC + A++ V +M++KG++P TYN ++ + +E+ +
Sbjct: 324 RNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECL 383
Query: 352 PNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
PN S LI + K+ A + DM +G
Sbjct: 384 PNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 116/264 (43%), Gaps = 25/264 (9%)
Query: 3 KDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLD 62
K P +++ N L L G K E+ A F +M G++PDVV+Y ++ ++++
Sbjct: 207 KHQFQPDLQTFNIL---LSGWKSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIE 263
Query: 63 KGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLI 122
K ++L+ M +E P V Y V+GGL + + AR++ EM P+ YN I
Sbjct: 264 KAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAI 323
Query: 123 DGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFL 182
+C + A L M P+ TYN L + + + E+ V M GN L
Sbjct: 324 RNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECL 383
Query: 183 PGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGF--------------CRVG 228
P S + + ++A R+ E ++ GF C +
Sbjct: 384 PNTQSCMFL-----IKMFKRHEKVDMAMRLWE---DMVVKGFGSYSLVSDVLLDLLCDLA 435
Query: 229 RIEKAKEVLAKLVENGVVPSQISY 252
++E+A++ L ++VE G PS +S+
Sbjct: 436 KVEEAEKCLLEMVEKGHRPSNVSF 459
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 134/289 (46%), Gaps = 18/289 (6%)
Query: 82 VYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARM 141
V+N ++ G + +A L +M + P+ +T+N LI G+ + EK + M
Sbjct: 185 VFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELM 244
Query: 142 KAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACS--- 198
+P V+++ ++ GL + + A + +M +G P + I AC+
Sbjct: 245 CLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLL--PACTTLA 302
Query: 199 ---NGNGSLRANVAARIDERTY--SALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYN 253
+G +V +++ + SALL+ + + G I +A + K + + +++N
Sbjct: 303 YMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKK----TTVTFN 358
Query: 254 ILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEK 313
++ Y + G +KA++ +QME G K ++TF ++ G D + M K
Sbjct: 359 SMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNK 418
Query: 314 -GIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
I P LE Y +++ GR V+ +E+++ + M+P++ +G+L+
Sbjct: 419 YRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMR---MEPDLFVWGALL 464
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 7/122 (5%)
Query: 255 LVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKG 314
L++ Y G V A + + E+ L V FN +I+ + + D+A VK M G
Sbjct: 158 LIDMYSKFGEVGNARKVFSDLGEQDL----VVFNAMISGYANNSQADEALNLVKDMKLLG 213
Query: 315 IAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLC---KDRKLL 371
I P + T+N+LI+G+ + N K EILE + G KP+V+S+ S+I+ L ++ K
Sbjct: 214 IKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAF 273
Query: 372 DA 373
DA
Sbjct: 274 DA 275
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 77/151 (50%), Gaps = 8/151 (5%)
Query: 213 DERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTA 272
D S+L++ + + G + A++V + L E +V +N +++ Y + ++A+
Sbjct: 151 DAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVV----FNAMISGYANNSQADEALNLV 206
Query: 273 EQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRI 332
+ M+ G+KP +T+N LI+ F ++ ++ M G P + ++ S+I+G +
Sbjct: 207 KDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGL--V 264
Query: 333 SNFV--KCFEILEEIEKKGMKPNVISYGSLI 361
NF K F+ +++ G+ PN + +L+
Sbjct: 265 HNFQNEKAFDAFKQMLTHGLYPNSATIITLL 295
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 109/263 (41%), Gaps = 42/263 (15%)
Query: 119 NTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEG 178
++LID Y K GE+ A + + + E ++ +N ++ G ++ + ++A ++ +M+
Sbjct: 156 SSLIDMYSKFGEVGNARKVFSDL----GEQDLVVFNAMISGYANNSQADEALNLVKDMKL 211
Query: 179 NGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLA 238
G P D T++AL++GF + EK E+L
Sbjct: 212 LGIKP-----------------------------DVITWNALISGFSHMRNEEKVSEILE 242
Query: 239 KLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETG 298
+ +G P +S+ +++ H EKA +QM GL P+ T TL+
Sbjct: 243 LMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLA 302
Query: 299 EVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEE--IEKKGMKPNVIS 356
+ + + G+ ++L++ YG KC I E + +K K ++
Sbjct: 303 YMKHGKEIHGYSVVTGLEDHGFVRSALLDMYG------KCGFISEAMILFRKTPKKTTVT 356
Query: 357 YGSLINCLCKDRKLLDAEIVLGD 379
+ S+I C + L D + L D
Sbjct: 357 FNSMIFCYA-NHGLADKAVELFD 378
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 4/174 (2%)
Query: 4 DGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDK 63
DG P V S + LV + Q EK F M+ G+ P+ + + A L +
Sbjct: 247 DGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKH 306
Query: 64 GFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLID 123
G E+ G + FV + +L K + +A LF + + TVT+N++I
Sbjct: 307 GKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKK----TTVTFNSMIF 362
Query: 124 GYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEME 177
Y G +KA L +M+A + +T+ +L +G + + + + M+
Sbjct: 363 CYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQ 416
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 162/356 (45%), Gaps = 21/356 (5%)
Query: 43 PDVVSYGKAVEAAVMLKDLDKGFELMGCMEKE-RVGPSVFVYNLVLGGLCKVRRVKDARK 101
P++V ++++ ++K++D L +K+ PS Y ++ GL + R +
Sbjct: 170 PNMVHITQSLK---IVKEVDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQS 226
Query: 102 LFDEML-----HRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCL 156
LF+EM+ H +L N YN +I K ++E AF + + + TYN L
Sbjct: 227 LFEEMVQDSSSHGDLSFNA--YNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNL 284
Query: 157 LGGLCSSGRVNDAREVLVEME-GNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDER 215
+ + G A E+ ME + L G ++ S +G + ++ ER
Sbjct: 285 MMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIP--SLAKSGRLDAAFKLFQQMKER 342
Query: 216 -------TYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKA 268
+S+L++ + GR++ + +V ++ G PS + L+++Y G ++ A
Sbjct: 343 KLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTA 402
Query: 269 IQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLING 328
++ ++M++ G +P++ + +I ++G+++ A K M + G PT TY+ L+
Sbjct: 403 LRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEM 462
Query: 329 YGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ +I + G++P + SY SL+ L R + A +L +M + G
Sbjct: 463 HAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMG 518
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 126/309 (40%), Gaps = 32/309 (10%)
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
LD F+L M++ ++ PS V++ ++ + K R+ + K++ EM P+ + +
Sbjct: 329 LDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVS 388
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
LID Y K G+++ A L MK P+ Y ++ SG++ A V +ME G
Sbjct: 389 LIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAG 448
Query: 181 FLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKL 240
FLP TYS LL G+++ A ++ +
Sbjct: 449 FLP-----------------------------TPSTYSCLLEMHAGSGQVDSAMKIYNSM 479
Query: 241 VENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEV 300
G+ P SY L+ ++ V+ A + +M+ G + L+ + + V
Sbjct: 480 TNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLM-IYIKDASV 538
Query: 301 DQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSL 360
D A +W++ M GI L + + +LE + K +++ Y S+
Sbjct: 539 DLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSI 598
Query: 361 INCL--CKD 367
+ L C+D
Sbjct: 599 LAHLVRCQD 607
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 78/174 (44%)
Query: 16 LFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKER 75
+ +L S + + +F M E +RP + V++ LD ++ M+
Sbjct: 319 IIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFG 378
Query: 76 VGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAF 135
PS ++ ++ K ++ A +L+DEM PN Y +I+ + K G++E A
Sbjct: 379 HRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAM 438
Query: 136 SLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRI 189
++ M+ P+ TY+CLL SG+V+ A ++ M G PG S I
Sbjct: 439 TVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYI 492
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 84/181 (46%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M++ + PS + L +++ + + + + V+ +M G RP + +++
Sbjct: 339 MKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGK 398
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNT 120
LD L M+K P+ +Y +++ K +++ A +F +M +P TY+
Sbjct: 399 LDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSC 458
Query: 121 LIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNG 180
L++ + G+++ A + M P + +Y LL L + V+ A ++L+EM+ G
Sbjct: 459 LLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMG 518
Query: 181 F 181
+
Sbjct: 519 Y 519
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 152/344 (44%), Gaps = 61/344 (17%)
Query: 30 LAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGG 89
+ V+ MV S + PD S ++AAV + D G EL R+G
Sbjct: 102 IQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSV--AVRLG------------ 147
Query: 90 LCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPS 149
V + + I YCK GE E A ++ N E
Sbjct: 148 ---------------------FVGDEFCESGFITLYCKAGEFENA----RKVFDENPERK 182
Query: 150 VITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSL----- 204
+ ++N ++GGL +GR N+A E+ V+M+ +G P F+ + +A G G L
Sbjct: 183 LGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSV---TASCGGLGDLSLAFQ 239
Query: 205 --RANVAARIDERTYSALLNG----FCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNA 258
+ + A+ +E++ +LN + + GR++ A + ++ + VV S++ ++
Sbjct: 240 LHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVV----SWSSMIVG 295
Query: 259 YCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKM-LEKGIAP 317
Y G +A++ QM E G++P+ +TF +++ G V++ + + M E + P
Sbjct: 296 YAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEP 355
Query: 318 TLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLI 361
L Y +++ R + +++EE+ MKPNV+ +G L+
Sbjct: 356 GLSHYGCIVDLLSRDGQLKEAKKVVEEMP---MKPNVMVWGCLM 396
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 118/291 (40%), Gaps = 23/291 (7%)
Query: 12 SVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCM 71
S N + L + + + + +F DM SG+ PD + + L DL F+L C+
Sbjct: 185 SWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCV 244
Query: 72 EKERV--GPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVG 129
+ + + + N ++ K R+ A +F+EM RN+ V+++++I GY G
Sbjct: 245 LQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNV----VSWSSMIVGYAANG 300
Query: 130 EMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRI 189
+A +M+ P+ IT+ +L G V + + M+ L G S
Sbjct: 301 NTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHY 360
Query: 190 VFDDDSACSNGNGSLRANVAARIDER----TYSALLNGFCRVGRIEKAKEVLAKLVE--- 242
D +G V + + + L+ G + G +E A+ V +VE
Sbjct: 361 GCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEP 420
Query: 243 --NGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLK--PSYVTFNT 289
+GV Y +L N Y G + + + M+ + + P+Y +T
Sbjct: 421 WNDGV------YVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYSYAST 465
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/400 (19%), Positives = 175/400 (43%), Gaps = 44/400 (11%)
Query: 8 PSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFEL 67
P++ N +F S L ++ M+ G+ P+ ++ +++ K +G ++
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 68 MGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNT------------ 115
G + K ++V+ ++ + R++DA K+FD+ HR++V T
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216
Query: 116 ---------------VTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGL 160
V++N +I GY + G ++A L M N P T ++
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276
Query: 161 CSSGRVNDAREVLVEMEGNGFLPGGFSRIV---FDDDSACSNGNGSLRANVAARI---DE 214
SG + R+V + ++ +GF G +IV D S C G + R+ D
Sbjct: 277 AQSGSIELGRQVHLWIDDHGF--GSNLKIVNALIDLYSKC--GELETACGLFERLPYKDV 332
Query: 215 RTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVE--KAIQTA 272
+++ L+ G+ + ++A + +++ +G P+ ++ ++ A H G ++ + I
Sbjct: 333 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVY 392
Query: 273 EQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRI 332
+G+ + +LI+ + + G+++ A + +L K +L ++N++I G+
Sbjct: 393 IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK----SLSSWNAMIFGFAMH 448
Query: 333 SNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLD 372
F++ + K G++P+ I++ L++ C +LD
Sbjct: 449 GRADASFDLFSRMRKIGIQPDDITFVGLLSA-CSHSGMLD 487
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/323 (18%), Positives = 134/323 (41%), Gaps = 36/323 (11%)
Query: 10 VRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMG 69
V S N + + +++ L +F DM+++ +RPD + V A ++ G ++
Sbjct: 231 VVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHL 290
Query: 70 CMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVG 129
++ G ++ + N ++ K ++ A LF+ + +++++ ++NTLI GY +
Sbjct: 291 WIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI----SWNTLIGGYTHMN 346
Query: 130 EMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRI 189
++A L M P+ +T +L G ++ R + +
Sbjct: 347 LYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI---------------HV 391
Query: 190 VFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQ 249
D SLR ++L++ + + G IE A +V ++ +
Sbjct: 392 YIDKRLKGVTNASSLR------------TSLIDMYAKCGDIEAAHQVFNSILHKSLS--- 436
Query: 250 ISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKK 309
S+N ++ + G + + +M + G++P +TF L++ +G +D +
Sbjct: 437 -SWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRT 495
Query: 310 MLEK-GIAPTLETYNSLINGYGR 331
M + + P LE Y +I+ G
Sbjct: 496 MTQDYKMTPKLEHYGCMIDLLGH 518
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 99/226 (43%), Gaps = 14/226 (6%)
Query: 147 EPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNG---NGS 203
EP+++ +N + G S A ++ V M G LP ++ A S
Sbjct: 96 EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 204 LRANV---AARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYC 260
+ +V +D +++L++ + + GR+E A +V K VV SY L+ Y
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVV----SYTALIKGYA 211
Query: 261 HEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLE 320
GY+E A + +++ + + V++N +I+ + ETG +A K M++ + P
Sbjct: 212 SRGYIENAQKLFDEIPVKDV----VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDES 267
Query: 321 TYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCK 366
T ++++ + + ++ I+ G N+ +LI+ K
Sbjct: 268 TMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSK 313
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 163/378 (43%), Gaps = 40/378 (10%)
Query: 5 GVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESG-IRPDVVSYGKAVEAAVMLKDLDK 63
+ P +S+ L G + ++++ F ES R ++ Y + V V K L
Sbjct: 36 AISPPQKSLTSLVN---GERNPKRIVEKFKKACESERFRTNIAVYDRTVRRLVAAKRLHY 92
Query: 64 GFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLID 123
E++ +K R ++ K ++A+K+F+EM +R+ + +++N L+
Sbjct: 93 VEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLS 152
Query: 124 GY---CKVGEMEKAFS-LKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGN 179
Y K +E+ F+ L ++ + +P +++YN L+ LC + +A +L E+E
Sbjct: 153 AYRLSKKFDVVEELFNELPGKL---SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENK 209
Query: 180 GFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAK 239
G P D T++ LL G+ E +E+ AK
Sbjct: 210 GLKP-----------------------------DIVTFNTLLLSSYLKGQFELGEEIWAK 240
Query: 240 LVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGE 299
+VE V +YN + +E ++ + +++ GLKP +FN +I G+
Sbjct: 241 MVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGK 300
Query: 300 VDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGS 359
+D+AE W K++++ G P T+ L+ + +F E+ +E K +
Sbjct: 301 MDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQ 360
Query: 360 LINCLCKDRKLLDAEIVL 377
L++ L K K +AE ++
Sbjct: 361 LVDELVKGSKREEAEEIV 378
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 1/170 (0%)
Query: 216 TYSALLNGFCRVGRIEKAKEVLAKLV-ENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQ 274
+++ALL+ + + + +E+ +L + + P +SYN L+ A C + + +A+ ++
Sbjct: 146 SFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDE 205
Query: 275 MEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISN 334
+E +GLKP VTFNTL+ G+ + E KM+EK +A + TYN+ + G +
Sbjct: 206 IENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAK 265
Query: 335 FVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
+ + E++ G+KP+V S+ ++I + K+ +AE ++ G
Sbjct: 266 SKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHG 315
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 82/182 (45%)
Query: 3 KDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLD 62
K + P + S N L + L + +A+ ++ G++PD+V++ + ++ + +
Sbjct: 173 KLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFE 232
Query: 63 KGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLI 122
G E+ M ++ V + YN L GL + K+ LF E+ L P+ ++N +I
Sbjct: 233 LGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMI 292
Query: 123 DGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFL 182
G G+M++A + + P T+ LL +C +G A E+ E +L
Sbjct: 293 RGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYL 352
Query: 183 PG 184
G
Sbjct: 353 VG 354
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 168/399 (42%), Gaps = 82/399 (20%)
Query: 8 PSVRSVNRLFETLVGS----KQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDK 63
P +N L+ T++ +K L F M + P V ++ ++ +L
Sbjct: 94 PIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRV 153
Query: 64 GFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLID 123
G E+ G + K +F + K R+V +ARK+FD M R+LV ++NT++
Sbjct: 154 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLV----SWNTIVA 209
Query: 124 GYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGF-L 182
GY + G A + M N +PS IT +L V+ R + V E +G+ +
Sbjct: 210 GYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPA------VSALRLISVGKEIHGYAM 263
Query: 183 PGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVE 242
GF +V N++ +AL++ + + G +E A+++ ++E
Sbjct: 264 RSGFDSLV----------------NIS--------TALVDMYAKCGSLETARQLFDGMLE 299
Query: 243 NGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVT---------------- 286
VV S+N +++AY ++A+ ++M + G+KP+ V+
Sbjct: 300 RNVV----SWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLER 355
Query: 287 -------------------FNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLIN 327
N+LI+ +C+ EVD A K+ + TL ++N++I
Sbjct: 356 GRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSR----TLVSWNAMIL 411
Query: 328 GYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCK 366
G+ + + ++ + +KP+ +Y S+I + +
Sbjct: 412 GFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAE 450
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/337 (19%), Positives = 154/337 (45%), Gaps = 31/337 (9%)
Query: 4 DGVLP-SVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLD 62
DG+L +V S N + + V ++ ++ + +F M++ G++P VS A+ A L DL+
Sbjct: 295 DGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLE 354
Query: 63 KGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLI 122
+G + + + +V V N ++ CK + V A +F ++ R LV ++N +I
Sbjct: 355 RGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLV----SWNAMI 410
Query: 123 DGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFL 182
G+ + G A + ++M++ +P TY ++ + + A+ ++
Sbjct: 411 LGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK----------WI 460
Query: 183 PGGFSRIVFDDDSACSNGNGSLRANVAARIDER------------TYSALLNGFCRVGRI 230
G R D + + + A A + R T++A+++G+ G
Sbjct: 461 HGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFG 520
Query: 231 EKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEER-GLKPSYVTFNT 289
+ A E+ ++ + + P+ +++ +++A H G VE ++ M+E ++ S +
Sbjct: 521 KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGA 580
Query: 290 LINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLI 326
+++ G +++A ++ +M + P + Y +++
Sbjct: 581 MVDLLGRAGRLNEAWDFIMQM---PVKPAVNVYGAML 614
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 154/376 (40%), Gaps = 71/376 (18%)
Query: 30 LAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGG 89
L + M E ++P ++ + A L+ + G E+ G + V + ++
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280
Query: 90 LCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPS 149
K ++ AR+LFD ML RN+V ++N++ID Y + ++A + +M +P+
Sbjct: 281 YAKCGSLETARQLFDGMLERNVV----SWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPT 336
Query: 150 VITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVA 209
++ ++G L + + D +E F+ + D + + N
Sbjct: 337 DVS---VMGALHACADLGD-------LERGRFIHKLSVELGLDRNVSVVN---------- 376
Query: 210 ARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAI 269
+L++ +C+ ++ A + KL +V S+N ++ + G A+
Sbjct: 377 ---------SLISMYCKCKEVDTAASMFGKLQSRTLV----SWNAMILGFAQNGRPIDAL 423
Query: 270 QTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWV-----KKMLEKGIAPT------ 318
QM R +KP T+ ++I E A +W+ + L+K + T
Sbjct: 424 NYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA-KWIHGVVMRSCLDKNVFVTTALVDM 482
Query: 319 ---------------------LETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISY 357
+ T+N++I+GYG E+ EE++K +KPN +++
Sbjct: 483 YAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTF 542
Query: 358 GSLINCLCKDRKLLDA 373
S+I+ C L++A
Sbjct: 543 LSVISA-CSHSGLVEA 557
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 156/346 (45%), Gaps = 28/346 (8%)
Query: 29 VLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLG 88
L +F +M ++ + +YG +++ L L +G ++ G +EK ++ V + +L
Sbjct: 97 ALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLS 156
Query: 89 GLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEP 148
+ ++++AR FD M R+L V++N +IDGY + +FSL M +P
Sbjct: 157 LYARCGKMEEARLQFDSMKERDL----VSWNAMIDGYTANACADTSFSLFQLMLTEGKKP 212
Query: 149 SVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPG-----GFSRIVFDDDSAC-SNGNG 202
T+ G L + V E++ E+ G G R + + C S N
Sbjct: 213 DCFTF----GSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANA 268
Query: 203 SLRANVAARIDERTYSALLNGFCRVGR-IEKAKEVLAKLVENGVVPSQISYNILVNAYCH 261
+ D + +AL+ GF + A ++ ++ + ++V++
Sbjct: 269 WKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDE----VVVSSMLK 324
Query: 262 EGYVEKAIQTAEQMEERGLKPSYVTF-----NTLINKFCETGEVDQAERWVKKMLEKGIA 316
++ Q+ LK S + F N+LI+ + ++GE++ A ++M EK +
Sbjct: 325 ICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDV- 383
Query: 317 PTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLIN 362
++ SLI GYGR NF K ++ +E + +KPN +++ SL++
Sbjct: 384 ---RSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLS 426
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 159/354 (44%), Gaps = 15/354 (4%)
Query: 30 LAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGG 89
L +F MV + D + + LKDL+ G + +E++R+G + V N ++
Sbjct: 203 LMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNM 262
Query: 90 LCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPS 149
K R+ +AR +FD M R+++ T+ +I+GY + G++E A L M+ P+
Sbjct: 263 YLKCGRMDEARFVFDRMERRDVI----TWTCMINGYTEDGDVENALELCRLMQFEGVRPN 318
Query: 150 VITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDD-----SACSNGNGSL 204
+T L+ + +VND + + G +S I+ + + C +
Sbjct: 319 AVTIASLVSVCGDALKVNDGKC----LHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCF 374
Query: 205 RA-NVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEG 263
R + A++ +SA++ G + + A + ++ V P+ + N L+ AY
Sbjct: 375 RVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALA 434
Query: 264 YVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYN 323
+ +A+ + + G S L++ + + G ++ A + + EK + + +
Sbjct: 435 DLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWG 494
Query: 324 SLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLCKDRKLLDAEIVL 377
+LI+GYG + ++ E+ + G+ PN I++ S +N C L++ + L
Sbjct: 495 ALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNA-CSHSGLVEEGLTL 547
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/346 (19%), Positives = 139/346 (40%), Gaps = 46/346 (13%)
Query: 40 GIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDA 99
G+RP+ V+ V ++ G L G +++V + + ++ K +RV
Sbjct: 314 GVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLC 373
Query: 100 RKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGG 159
++F + P ++ +I G + + A L RM+ + EP++ T N LL
Sbjct: 374 FRVFSGASKYHTGP----WSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA 429
Query: 160 LCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSA 219
+ + A + + GF+ + +D T
Sbjct: 430 YAALADLRQAMNIHCYLTKTGFM---------------------------SSLDAAT--G 460
Query: 220 LLNGFCRVGRIEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERG 279
L++ + + G +E A ++ + E + + L++ Y G A+Q +M G
Sbjct: 461 LVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSG 520
Query: 280 LKPSYVTFNTLINKFCETGEVDQAERWVKKMLE--KGIAPTLETYNSLINGYGRISNFVK 337
+ P+ +TF + +N +G V++ + MLE K +A + Y +++ GR +
Sbjct: 521 VTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARS-NHYTCIVDLLGRAGRLDE 579
Query: 338 CFEILEEIEKKGMKPNVISYGSLI-NCLCKDRKLLDAEIVLGDMAS 382
+ ++ I +P +G+L+ C+ + + LG+MA+
Sbjct: 580 AYNLITTIP---FEPTSTVWGALLAACVTHE------NVQLGEMAA 616
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 112/258 (43%), Gaps = 22/258 (8%)
Query: 119 NTLIDGYCKVGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEM-- 176
+TL Y G + A L M + S+++YN ++ G +DA V + M
Sbjct: 53 STLSVTYALCGHITYARKLFEEMP----QSSLLSYNIVIRMYVREGLYHDAISVFIRMVS 108
Query: 177 EGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARI-------DERTYSALLNGFCRVGR 229
EG +P G++ F +A + L V RI D+ +ALL + G+
Sbjct: 109 EGVKCVPDGYT-YPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGK 167
Query: 230 IEKAKEVLAKLVENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNT 289
+E A++V + V IS+N +++ Y GY+ A+ + M + + T +
Sbjct: 168 VEMARDVFDVMKNRDV----ISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVS 223
Query: 290 LINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKG 349
++ +++ K + EK + +E N+L+N Y + + + + +E++
Sbjct: 224 MLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERR- 282
Query: 350 MKPNVISYGSLINCLCKD 367
+VI++ +IN +D
Sbjct: 283 ---DVITWTCMINGYTED 297
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 153/349 (43%), Gaps = 49/349 (14%)
Query: 14 NRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKG-----FELM 68
N L V + + E+ + +F+DM + G+ P V+ + A+ + +++G ++
Sbjct: 243 NALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIV 302
Query: 69 GCMEKERV-GPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCK 127
ME + + G S+ L CKV ++ A +FD M +++V T+N +I GY +
Sbjct: 303 NGMELDNILGTSL------LNFYCKVGLIEYAEMVFDRMFEKDVV----TWNLIISGYVQ 352
Query: 128 VGEMEKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFS 187
G +E A + M+ + +T L+ + + +EV
Sbjct: 353 QGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEV--------------- 397
Query: 188 RIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVVP 247
C S +++ S +++ + + G I AK+V VE +
Sbjct: 398 --------QCYCIRHSFESDIVLA------STVMDMYAKCGSIVDAKKVFDSTVEKDL-- 441
Query: 248 SQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQAERWV 307
I +N L+ AY G +A++ M+ G+ P+ +T+N +I G+VD+A+
Sbjct: 442 --ILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF 499
Query: 308 KKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVIS 356
+M GI P L ++ +++NG + + L ++++ G++PN S
Sbjct: 500 LQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFS 548
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 144/304 (47%), Gaps = 19/304 (6%)
Query: 76 VGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAF 135
V + ++N +L + +A +LF M + PN +T+N +I + G++++A
Sbjct: 437 VEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAK 496
Query: 136 SLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVEMEGNGFLPGGFSRIVFDDDS 195
+ +M++ P++I++ ++ G+ +G +A L +M+ +G P FS V S
Sbjct: 497 DMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITV--ALS 554
Query: 196 ACSNG---------NGSLRANVAARIDERTYSALLNGFCRVGRIEKAKEVLAKLVENGVV 246
AC++ +G + N+ ++L++ + + G I KA++V + + +
Sbjct: 555 ACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELP 614
Query: 247 PSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLINKFCETGEVDQA-ER 305
S N +++AY G +++AI +E GLKP +T +++ G+++QA E
Sbjct: 615 LS----NAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEI 670
Query: 306 WVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMKPNVISYGSLINCLC 365
+ + ++ + P LE Y +++ K ++EE+ KP+ SL+
Sbjct: 671 FTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMP---FKPDARMIQSLVASCN 727
Query: 366 KDRK 369
K RK
Sbjct: 728 KQRK 731
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 171/397 (43%), Gaps = 49/397 (12%)
Query: 27 EKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKDLDKGFELMGCMEKERVGPSVFVYNLV 86
E L F +M+E+ I PD +A LK G + G + K + VFV + +
Sbjct: 155 EGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSL 214
Query: 87 LGGLCKVRRVKDARKLFDEMLHRNLVPNTVTYNTLIDGYCKVGEMEKAFSLKARMKAPNA 146
K + DA K+FDE+ RN V +N L+ GY + G+ E+A L + M+
Sbjct: 215 ADMYGKCGVLDDASKVFDEIPDRN----AVAWNALMVGYVQNGKNEEAIRLFSDMRKQGV 270
Query: 147 EPSVITYNCLLGGLCSSGRVNDARE-----VLVEMEGNGFLPGGFSRIVFDDDSACSNGN 201
EP+ +T + L + G V + ++ ++ ME + L G S + F C G
Sbjct: 271 EPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNIL--GTSLLNF----YCKVGL 324
Query: 202 GSLRANVAARIDER---TYSALLNGF------------CRVGRIEKAKE---VLAKLVEN 243
V R+ E+ T++ +++G+ C++ R+EK K LA L+
Sbjct: 325 IEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSA 384
Query: 244 GVVPSQISYNILVNAYCHEGYVEK----------------AIQTAEQMEERGLKPSYVTF 287
+ V YC E +I A+++ + ++ + +
Sbjct: 385 AARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILW 444
Query: 288 NTLINKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEK 347
NTL+ + E+G +A R M +G+ P + T+N +I R + ++ +++
Sbjct: 445 NTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQS 504
Query: 348 KGMKPNVISYGSLINCLCKDRKLLDAEIVLGDMASRG 384
G+ PN+IS+ +++N + ++ +A + L M G
Sbjct: 505 SGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESG 541
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 150/360 (41%), Gaps = 53/360 (14%)
Query: 1 MRKDGVLPSVRSVNRLFETLVGSKQFEKVLAVFTDMVESGIRPDVVSYGKAVEAAVMLKD 60
M+ +GV P+V + N + +L+ + Q ++ +F M SGI P+++S+ + V
Sbjct: 467 MQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGC 526
Query: 61 LDKGFELMGCMEKERVGPSVFVYNLVLGGLCKVRRVKDARKLFDEMLHRNLVPNTVTY-- 118
++ + M++ + P+ F + L + + R + ++ RNL +++
Sbjct: 527 SEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYII-RNLQHSSLVSIE 585
Query: 119 NTLIDGYCKVGEM---EKAFSLKARMKAPNAEPSVITYNCLLGGLCSSGRVNDAREVLVE 175
+L+D Y K G++ EK F K + P + N ++ G + +A +
Sbjct: 586 TSLVDMYAKCGDINKAEKVFGSKLYSELPLS-------NAMISAYALYGNLKEAIALYRS 638
Query: 176 MEGNGFLPGGFSRIVFDDDSACSNGNGSLRANVAARIDERTYSALLNGFCRVGRIEKAKE 235
+EG G P D T + +L+ G I +A E
Sbjct: 639 LEGVGLKP-----------------------------DNITITNVLSACNHAGDINQAIE 669
Query: 236 VLAKLV-ENGVVPSQISYNILVNAYCHEGYVEKAIQTAEQMEERGLKPSYVTFNTLI--- 291
+ +V + + P Y ++V+ G EKA++ E+M KP +L+
Sbjct: 670 IFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMP---FKPDARMIQSLVASC 726
Query: 292 NKFCETGEVDQAERWVKKMLEKGIAPTLETYNSLINGYGRISNFVKCFEILEEIEKKGMK 351
NK +T VD R K+LE + Y ++ N Y ++ + ++ E ++ KG+K
Sbjct: 727 NKQRKTELVDYLSR---KLLESEPENS-GNYVTISNAYAVEGSWDEVVKMREMMKAKGLK 782