Miyakogusa Predicted Gene

Lj0g3v0166219.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0166219.1 tr|G7L6C0|G7L6C0_MEDTR F-box protein OS=Medicago
truncatula GN=MTR_7g034720 PE=4 SV=1,84.32,0,seg,NULL; no
description,NULL; AAA,ATPase, AAA-type, core; P-loop containing
nucleoside triphosphate,NODE_62301_length_1316_cov_13.996201.path1.1
         (386 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G33290.1 | Symbols:  | P-loop containing nucleoside triphosph...   543   e-155
AT1G73170.1 | Symbols:  | P-loop containing nucleoside triphosph...   348   3e-96
AT3G10420.2 | Symbols: SPD1 | P-loop containing nucleoside triph...   345   2e-95
AT3G10420.1 | Symbols: SPD1 | P-loop containing nucleoside triph...   344   6e-95
AT1G73170.2 | Symbols:  | P-loop containing nucleoside triphosph...   312   2e-85
AT1G33290.2 | Symbols:  | P-loop containing nucleoside triphosph...   285   3e-77

>AT1G33290.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:12074125-12075989
           FORWARD LENGTH=379
          Length = 379

 Score =  543 bits (1400), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 262/332 (78%), Positives = 299/332 (90%)

Query: 51  DDLQPLLQILPSDLHHNLLNQANRPQLLEVILDLGRYPEARYLGKLGSQYLRNTEVTVKE 110
           D+L   L+ILP DL H LLN + R QL+EVI+DLGR PEARYLG+ G QYLRN EV+++E
Sbjct: 44  DNLGAFLEILPKDLRHRLLNDSRRNQLVEVIMDLGRPPEARYLGEPGGQYLRNNEVSMEE 103

Query: 111 LEHAQQAVGEFGRDNRAGIEGTLHRISAIRSRNGAIVGLTCRVGRAVSGHIDMVYDLLQY 170
           LE AQ+ VGEFG DNRAGIEGTLHRISAIR+R G IVGLTCRVGRAVSGHIDM+YDLL Y
Sbjct: 104 LEDAQELVGEFGADNRAGIEGTLHRISAIRNRKGFIVGLTCRVGRAVSGHIDMLYDLLHY 163

Query: 171 GKNILFVGRPGVGKTTVMREIARVLSDEFNKRVVIVDTSNEIGGDGNIPHAAIGGARRMQ 230
           GK+ILFVGRPGVGKTTV+REIARVLSDEF KRVVI+DTSNEIGGDG+IPH+AIGG+RRMQ
Sbjct: 164 GKSILFVGRPGVGKTTVLREIARVLSDEFQKRVVIIDTSNEIGGDGDIPHSAIGGSRRMQ 223

Query: 231 VPEPSMQHSVMIEAVENHMPEVIIVDEIGTVAEAHACRSIAERGIMLIGTAHGEQLENIM 290
           VP+PS+QH VMIEAVENHMP+VIIVDEIGT AEA ACRSIAERG+MLIGTAHGEQL+NI+
Sbjct: 224 VPKPSLQHKVMIEAVENHMPQVIIVDEIGTEAEALACRSIAERGVMLIGTAHGEQLQNII 283

Query: 291 KNPTLSDLIGGIASVTLGDAEARARKCQKTILERKAPPTFDFVMEMRDRHYWITHQTDKS 350
           KNPTLSDLIGGI +VTLGD EARAR+ QK+ILERKAPPTF F++EMR+R YWI HQT+KS
Sbjct: 284 KNPTLSDLIGGIETVTLGDEEARARRSQKSILERKAPPTFYFLIEMRERDYWIAHQTEKS 343

Query: 351 VDLLLQGKIPQVEVRKRDEKCKVVIEKSKAYD 382
           VD+LL+G+ P VEVR+RDE+ KVVIE+ KAYD
Sbjct: 344 VDMLLRGRNPMVEVRRRDEEYKVVIERWKAYD 375


>AT1G73170.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:27511722-27514783
           REVERSE LENGTH=666
          Length = 666

 Score =  348 bits (894), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 176/338 (52%), Positives = 240/338 (71%), Gaps = 4/338 (1%)

Query: 51  DDLQPLLQILPSDLHHNLLNQANRPQLLEVILDLGRYPEARYLGKLGSQYLRNTEVTVKE 110
           D+L+ LL ++P ++   L       +L+E++LDLGR P AR+    G   + +  V VK+
Sbjct: 79  DELRRLLALVPEEIRQTLKEHPEISELIEIVLDLGRKPLARFPS--GDFVISDDAVRVKD 136

Query: 111 LEHAQQAVGEFGRDNRAGIEGTLHRISAIRSRNGAIVGLTCRVGRAVSGHIDMVYDLLQY 170
           LE A   VGEF  DNRAGI  TLHRISAIR+R G I+GLTCRVGR+V G  +++ DL+Q 
Sbjct: 137 LEFAVSQVGEFTNDNRAGISRTLHRISAIRNRKGEIIGLTCRVGRSVRGSANLLRDLVQD 196

Query: 171 GKNILFVGRPGVGKTTVMREIARVLSDEFNKRVVIVDTSNEIGGDGNIPHAAIGGARRMQ 230
           G ++L +G PGVGKTT++RE+AR+L +++ KRV+IVDTSNEIGGDG+IPH  IG ARRMQ
Sbjct: 197 GNSLLLIGPPGVGKTTMIREVARMLGNDYEKRVMIVDTSNEIGGDGDIPHPGIGNARRMQ 256

Query: 231 VPEPSMQHSVMIEAVENHMPEVIIVDEIGTVAEAHACRSIAERGIMLIGTAHGEQLENIM 290
           VP   +QH V+IEAVENHMP+VI++DEIGT  EA A  +IAERGI L+ TAHG  +EN++
Sbjct: 257 VPNSDIQHKVLIEAVENHMPQVIVIDEIGTKLEAIAASTIAERGIQLVATAHGATIENLI 316

Query: 291 KNPTLSDLIGGIASVTLGDAEARARKCQKTILERKAPPTFDFVMEMRDRHYWITHQT-DK 349
           KNP+L  L+GG+ SVTLGD EA  R  QKT+LERK P TF+   E+  +     H++ + 
Sbjct: 317 KNPSLDLLVGGVQSVTLGDEEATRRGGQKTVLERKGPSTFNCGAEIVSKTEVRVHRSLEA 376

Query: 350 SVDLLLQGKIPQVEVRK-RDEKCKVVIEKSKAYDKCQI 386
           +VD +L G++P VE+RK +    +V++EK    D+  +
Sbjct: 377 TVDAILAGRLPNVEIRKIKSHGVEVIMEKEPFIDEKTV 414


>AT3G10420.2 | Symbols: SPD1 | P-loop containing nucleoside
           triphosphate hydrolases superfamily protein |
           chr3:3239307-3242274 FORWARD LENGTH=684
          Length = 684

 Score =  345 bits (886), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 178/316 (56%), Positives = 226/316 (71%), Gaps = 3/316 (0%)

Query: 52  DLQPLLQILPSDLHHNLLNQANRPQLLEVILDLGRYPEARYLGKLGSQYLRNTEVTVKEL 111
           +L   L+ILP      L+      +L+EV++DLGR P AR+    G   +    VT ++L
Sbjct: 96  ELDAFLEILPPATRKELVKHEAIEELIEVVMDLGRKPLARFPS--GDWVISEQPVTHQDL 153

Query: 112 EHAQQAVGEFGRDNRAGIEGTLHRISAIRSRNGAIVGLTCRVGRAVSGHIDMVYDLLQYG 171
           E A   VG+F  DNR+GI+ +LHRISAIR+R   ++GLTCRVGR VSG  +++ DL++ G
Sbjct: 154 ELAVSKVGDFSDDNRSGIDRSLHRISAIRNRKLQVIGLTCRVGRVVSGSAEIIRDLIEGG 213

Query: 172 KNILFVGRPGVGKTTVMREIARVLSDEFNKRVVIVDTSNEIGGDGNIPHAAIGGARRMQV 231
            +IL +G PGVGKTT++REIAR+L+DE  KRVVIVDTSNEIGGDG++PH+ IG ARRMQV
Sbjct: 214 GSILVIGSPGVGKTTLIREIARMLADEHRKRVVIVDTSNEIGGDGDVPHSGIGRARRMQV 273

Query: 232 PEPSMQHSVMIEAVENHMPEVIIVDEIGTVAEAHACRSIAERGIMLIGTAHGEQLENIMK 291
           P  ++QH VMIEAVENHMPE II+DEIGT  EA A  +IA+RG+ L+ TAHG  ++NI+K
Sbjct: 274 PNVNLQHDVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVATAHGMTIDNIIK 333

Query: 292 NPTLSDLIGGIASVTLGDAEARARKCQKTILERKAPPTFDFVMEMRDRHYWITHQ-TDKS 350
           NP+L  LIGGI SVTLGD EAR RK QKTILERK PPTF   +EM  R     HQ  D +
Sbjct: 334 NPSLQILIGGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTECRVHQRLDVT 393

Query: 351 VDLLLQGKIPQVEVRK 366
           VD +L GK    E+R+
Sbjct: 394 VDAILAGKSAPFEIRQ 409


>AT3G10420.1 | Symbols: SPD1 | P-loop containing nucleoside
           triphosphate hydrolases superfamily protein |
           chr3:3239307-3241571 FORWARD LENGTH=547
          Length = 547

 Score =  344 bits (883), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 178/316 (56%), Positives = 226/316 (71%), Gaps = 3/316 (0%)

Query: 52  DLQPLLQILPSDLHHNLLNQANRPQLLEVILDLGRYPEARYLGKLGSQYLRNTEVTVKEL 111
           +L   L+ILP      L+      +L+EV++DLGR P AR+    G   +    VT ++L
Sbjct: 96  ELDAFLEILPPATRKELVKHEAIEELIEVVMDLGRKPLARFPS--GDWVISEQPVTHQDL 153

Query: 112 EHAQQAVGEFGRDNRAGIEGTLHRISAIRSRNGAIVGLTCRVGRAVSGHIDMVYDLLQYG 171
           E A   VG+F  DNR+GI+ +LHRISAIR+R   ++GLTCRVGR VSG  +++ DL++ G
Sbjct: 154 ELAVSKVGDFSDDNRSGIDRSLHRISAIRNRKLQVIGLTCRVGRVVSGSAEIIRDLIEGG 213

Query: 172 KNILFVGRPGVGKTTVMREIARVLSDEFNKRVVIVDTSNEIGGDGNIPHAAIGGARRMQV 231
            +IL +G PGVGKTT++REIAR+L+DE  KRVVIVDTSNEIGGDG++PH+ IG ARRMQV
Sbjct: 214 GSILVIGSPGVGKTTLIREIARMLADEHRKRVVIVDTSNEIGGDGDVPHSGIGRARRMQV 273

Query: 232 PEPSMQHSVMIEAVENHMPEVIIVDEIGTVAEAHACRSIAERGIMLIGTAHGEQLENIMK 291
           P  ++QH VMIEAVENHMPE II+DEIGT  EA A  +IA+RG+ L+ TAHG  ++NI+K
Sbjct: 274 PNVNLQHDVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVATAHGMTIDNIIK 333

Query: 292 NPTLSDLIGGIASVTLGDAEARARKCQKTILERKAPPTFDFVMEMRDRHYWITHQ-TDKS 350
           NP+L  LIGGI SVTLGD EAR RK QKTILERK PPTF   +EM  R     HQ  D +
Sbjct: 334 NPSLQILIGGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTECRVHQRLDVT 393

Query: 351 VDLLLQGKIPQVEVRK 366
           VD +L GK    E+R+
Sbjct: 394 VDAILAGKSAPFEIRQ 409


>AT1G73170.2 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:27511722-27514395
           REVERSE LENGTH=538
          Length = 538

 Score =  312 bits (800), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 153/271 (56%), Positives = 203/271 (74%), Gaps = 2/271 (0%)

Query: 118 VGEFGRDNRAGIEGTLHRISAIRSRNGAIVGLTCRVGRAVSGHIDMVYDLLQYGKNILFV 177
           VGEF  DNRAGI  TLHRISAIR+R G I+GLTCRVGR+V G  +++ DL+Q G ++L +
Sbjct: 16  VGEFTNDNRAGISRTLHRISAIRNRKGEIIGLTCRVGRSVRGSANLLRDLVQDGNSLLLI 75

Query: 178 GRPGVGKTTVMREIARVLSDEFNKRVVIVDTSNEIGGDGNIPHAAIGGARRMQVPEPSMQ 237
           G PGVGKTT++RE+AR+L +++ KRV+IVDTSNEIGGDG+IPH  IG ARRMQVP   +Q
Sbjct: 76  GPPGVGKTTMIREVARMLGNDYEKRVMIVDTSNEIGGDGDIPHPGIGNARRMQVPNSDIQ 135

Query: 238 HSVMIEAVENHMPEVIIVDEIGTVAEAHACRSIAERGIMLIGTAHGEQLENIMKNPTLSD 297
           H V+IEAVENHMP+VI++DEIGT  EA A  +IAERGI L+ TAHG  +EN++KNP+L  
Sbjct: 136 HKVLIEAVENHMPQVIVIDEIGTKLEAIAASTIAERGIQLVATAHGATIENLIKNPSLDL 195

Query: 298 LIGGIASVTLGDAEARARKCQKTILERKAPPTFDFVMEMRDRHYWITHQT-DKSVDLLLQ 356
           L+GG+ SVTLGD EA  R  QKT+LERK P TF+   E+  +     H++ + +VD +L 
Sbjct: 196 LVGGVQSVTLGDEEATRRGGQKTVLERKGPSTFNCGAEIVSKTEVRVHRSLEATVDAILA 255

Query: 357 GKIPQVEVRK-RDEKCKVVIEKSKAYDKCQI 386
           G++P VE+RK +    +V++EK    D+  +
Sbjct: 256 GRLPNVEIRKIKSHGVEVIMEKEPFIDEKTV 286


>AT1G33290.2 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:12074125-12075989
           FORWARD LENGTH=303
          Length = 303

 Score =  285 bits (730), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 138/175 (78%), Positives = 155/175 (88%)

Query: 51  DDLQPLLQILPSDLHHNLLNQANRPQLLEVILDLGRYPEARYLGKLGSQYLRNTEVTVKE 110
           D+L   L+ILP DL H LLN + R QL+EVI+DLGR PEARYLG+ G QYLRN EV+++E
Sbjct: 44  DNLGAFLEILPKDLRHRLLNDSRRNQLVEVIMDLGRPPEARYLGEPGGQYLRNNEVSMEE 103

Query: 111 LEHAQQAVGEFGRDNRAGIEGTLHRISAIRSRNGAIVGLTCRVGRAVSGHIDMVYDLLQY 170
           LE AQ+ VGEFG DNRAGIEGTLHRISAIR+R G IVGLTCRVGRAVSGHIDM+YDLL Y
Sbjct: 104 LEDAQELVGEFGADNRAGIEGTLHRISAIRNRKGFIVGLTCRVGRAVSGHIDMLYDLLHY 163

Query: 171 GKNILFVGRPGVGKTTVMREIARVLSDEFNKRVVIVDTSNEIGGDGNIPHAAIGG 225
           GK+ILFVGRPGVGKTTV+REIARVLSDEF KRVVI+DTSNEIGGDG+IPH+AIGG
Sbjct: 164 GKSILFVGRPGVGKTTVLREIARVLSDEFQKRVVIIDTSNEIGGDGDIPHSAIGG 218



 Score =  132 bits (333), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 61/84 (72%), Positives = 74/84 (88%)

Query: 299 IGGIASVTLGDAEARARKCQKTILERKAPPTFDFVMEMRDRHYWITHQTDKSVDLLLQGK 358
           IGGI +VTLGD EARAR+ QK+ILERKAPPTF F++EMR+R YWI HQT+KSVD+LL+G+
Sbjct: 216 IGGIETVTLGDEEARARRSQKSILERKAPPTFYFLIEMRERDYWIAHQTEKSVDMLLRGR 275

Query: 359 IPQVEVRKRDEKCKVVIEKSKAYD 382
            P VEVR+RDE+ KVVIE+ KAYD
Sbjct: 276 NPMVEVRRRDEEYKVVIERWKAYD 299