Miyakogusa Predicted Gene

Lj0g3v0165779.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0165779.2 Non Chatacterized Hit- tr|I1H2B1|I1H2B1_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,32.98,8e-19,seg,NULL,CUFF.10387.2
         (242 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G49645.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   162   2e-40

>AT3G49645.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN:
           cellular_component unknown; Has 30201 Blast hits to
           17322 proteins in 780 species: Archae - 12; Bacteria -
           1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
           Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
           BLink). | chr3:18403129-18404427 REVERSE LENGTH=220
          Length = 220

 Score =  162 bits (410), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/231 (41%), Positives = 139/231 (60%), Gaps = 17/231 (7%)

Query: 12  LKEEIFHNFKNFMTGITKIDELVNAGSKLLSGFQQALEFMRKPPIDTKSKLVNKIIVANE 71
           LK++I   FK+FMT IT+++EL NA +  L  FQQ L F+++PPI T SKL+  II  NE
Sbjct: 7   LKKKISEIFKDFMTVITQLEELGNAANNFLLRFQQGLSFLQRPPIVTSSKLIENIIKKNE 66

Query: 72  TKRVKSYVNSGCRNPNNDVQSVTNLHSCKNGLNDIISKAKVILGELEGLLGDVTSSIESL 131
           T+R+KSY+ +GC N ++  QS   LH+  +GL+D + KAK +L ELE L  +   +IES 
Sbjct: 67  TRRLKSYIEAGCINIHDAAQSTRALHTSLSGLSDHLIKAKNLLIELERLTDEAALAIES- 125

Query: 132 HGNLALAAPDCGVKLYAQASYNDLEENAALSHSQSTDVTITTKKSIDVASLAALMAVIYS 191
              L   + D G++   Q + +  EEN  +   Q  +VT            AAL+AVIYS
Sbjct: 126 ATQLDKDSSD-GLQ---QVTCD--EENETVQLPQGPEVT----------EYAALIAVIYS 169

Query: 192 MVKQDYLMQERIVXXXXXXXXXXXXXXYCQMWPLRPFINDEIMHQAWKHVH 242
           M+KQ+Y+MQ++IV              Y  MW LRPF+ DEI+++AWK ++
Sbjct: 170 MMKQNYVMQDKIVRSLSLKSSSGELETYSLMWSLRPFVEDEIVNRAWKWIY 220