Miyakogusa Predicted Gene

Lj0g3v0165619.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0165619.1 Non Chatacterized Hit- tr|A3PDI1|A3PDI1_PROM0
Putative uncharacterized protein OS=Prochlorococcus ma,33.87,6e-19,no
description,START-like domain; Polyketide_cyc,Streptomyces
cyclase/dehydrase; Bet v1-like,NULL; c,CUFF.10380.1
         (266 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G01650.2 | Symbols:  | Polyketide cyclase / dehydrase and lip...   251   4e-67
AT4G01650.1 | Symbols:  | Polyketide cyclase / dehydrase and lip...   251   5e-67
AT5G08720.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Streptomyc...    93   2e-19

>AT4G01650.2 | Symbols:  | Polyketide cyclase / dehydrase and lipid
           transport protein | chr4:704578-706931 REVERSE
           LENGTH=211
          Length = 211

 Score =  251 bits (641), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 120/196 (61%), Positives = 152/196 (77%), Gaps = 2/196 (1%)

Query: 71  TSEVGVEESATLTEDGVCIEVTKLEKNSRRIESRISIDASLDAVWSILTDYERLADFIPG 130
           T E G  E   + +DGV IE+ KLEK+SRRI S+I ++ASLD+VWS+LTDYE+L+DFIPG
Sbjct: 10  TLEDGKTEELVVGDDGVLIELKKLEKSSRRIRSKIGMEASLDSVWSVLTDYEKLSDFIPG 69

Query: 131 LAVSQLLQKGHNFARLLQIGEQNLAFGIKFNAKGVVDCYEKELETLPSGMKRDIEFKMIE 190
           L VS+L++K  N  RL Q+G+QNLA G+KFNAK V+DCYEKELE LP G +R+I+FKM+E
Sbjct: 70  LVVSELVEKEGNRVRLFQMGQQNLALGLKFNAKAVLDCYEKELEVLPHGRRREIDFKMVE 129

Query: 191 GDFQLFEGKWSILQQFNSRSCE--ETQVQEVNTTLSYIVDVKPKLWLPVRLIEGRLCDEI 248
           GDFQLFEGKWSI Q       E  + Q ++  TTL+Y VDVKPK+WLPVRL+EGRLC EI
Sbjct: 130 GDFQLFEGKWSIEQLDKGIHGEALDLQFKDFRTTLAYTVDVKPKMWLPVRLVEGRLCKEI 189

Query: 249 KKNLVSVRGEAQKATD 264
           + NL+S+R  AQK  +
Sbjct: 190 RTNLMSIRDAAQKVIE 205


>AT4G01650.1 | Symbols:  | Polyketide cyclase / dehydrase and lipid
           transport protein | chr4:704578-705866 REVERSE
           LENGTH=288
          Length = 288

 Score =  251 bits (640), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 118/192 (61%), Positives = 150/192 (78%), Gaps = 2/192 (1%)

Query: 75  GVEESATLTEDGVCIEVTKLEKNSRRIESRISIDASLDAVWSILTDYERLADFIPGLAVS 134
           G  E   + +DGV IE+ KLEK+SRRI S+I ++ASLD+VWS+LTDYE+L+DFIPGL VS
Sbjct: 91  GKTEELVVGDDGVLIELKKLEKSSRRIRSKIGMEASLDSVWSVLTDYEKLSDFIPGLVVS 150

Query: 135 QLLQKGHNFARLLQIGEQNLAFGIKFNAKGVVDCYEKELETLPSGMKRDIEFKMIEGDFQ 194
           +L++K  N  RL Q+G+QNLA G+KFNAK V+DCYEKELE LP G +R+I+FKM+EGDFQ
Sbjct: 151 ELVEKEGNRVRLFQMGQQNLALGLKFNAKAVLDCYEKELEVLPHGRRREIDFKMVEGDFQ 210

Query: 195 LFEGKWSILQQFNSRSCE--ETQVQEVNTTLSYIVDVKPKLWLPVRLIEGRLCDEIKKNL 252
           LFEGKWSI Q       E  + Q ++  TTL+Y VDVKPK+WLPVRL+EGRLC EI+ NL
Sbjct: 211 LFEGKWSIEQLDKGIHGEALDLQFKDFRTTLAYTVDVKPKMWLPVRLVEGRLCKEIRTNL 270

Query: 253 VSVRGEAQKATD 264
           +S+R  AQK  +
Sbjct: 271 MSIRDAAQKVIE 282


>AT5G08720.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Streptomyces
           cyclase/dehydrase (InterPro:IPR005031); BEST Arabidopsis
           thaliana protein match is: Polyketide cyclase /
           dehydrase and lipid transport protein
           (TAIR:AT4G01650.1); Has 30201 Blast hits to 17322
           proteins in 780 species: Archae - 12; Bacteria - 1396;
           Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
           0; Other Eukaryotes - 2996 (source: NCBI BLink). |
           chr5:2841536-2845335 REVERSE LENGTH=719
          Length = 719

 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 96/190 (50%), Gaps = 17/190 (8%)

Query: 72  SEVGVEESATLTEDGVCIEVTKLEKNSRRIESRISIDASLDAVWSILTDYERLADFIPGL 131
           S +G +E     E  V  EV  +    RRI   I +D+   +VW++LTDYERLADFIP L
Sbjct: 73  SGLGFDERG---ERKVRCEVDVISWRERRIRGEIWVDSDSQSVWNVLTDYERLADFIPNL 129

Query: 132 AVSQLLQKGHNFARLLQIGEQNLAFGIKFNAKGVVDCYEKELETLPSGMKRDIEFKMIEG 191
             S  +   H     L+      A      A+ V+D +    E L S   R++ F M++G
Sbjct: 130 VWSGRIPCPHPGRIWLEQRGLQRALYWHIEARVVLDLH----ECLDSPNGRELHFSMVDG 185

Query: 192 DFQLFEGKWSILQQFNSRSCEETQVQEVNTTLSYIVDVKPKLWLPVRLIEGRLCDEIKKN 251
           DF+ FEGKWS+          ++ ++ V T LSY V+V P+   P   +E  +  ++  N
Sbjct: 186 DFKKFEGKWSV----------KSGIRSVGTVLSYEVNVIPRFNFPAIFLERIIRSDLPVN 235

Query: 252 LVSVRGEAQK 261
           L +V  +A+K
Sbjct: 236 LRAVARQAEK 245



 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 88/163 (53%), Gaps = 22/163 (13%)

Query: 105 ISIDASLDAVWSILTDYERLADFIPGLAVSQLLQKGHNFARLLQIGEQNLAFGIKFNAKG 164
           I++ A +  VW +LT YE L + +P LA+S++L + +N  R+LQ G + L + +  +A+ 
Sbjct: 341 ITVKAPVCEVWKVLTSYESLPEIVPNLAISKILSRDNNKVRILQEGCKGLLYMV-LHARA 399

Query: 165 VVDCYEKELETLPSGMKRDIEFKMIEGDFQLFEGKWSILQQFNSRSCEETQVQEVNTTLS 224
           V+D +E          +++I F+ +EGDF   EGKW I +Q  S           +T L 
Sbjct: 400 VLDLHEIR--------EQEIRFEQVEGDFDSLEGKW-IFEQLGSH----------HTLLK 440

Query: 225 YIVDVKPKL--WLPVRLIEGRLCDEIKKNLVSVRGEAQKATDR 265
           Y V+ K +   +L   ++E  + +++  NL ++R   +K  ++
Sbjct: 441 YTVESKMRKDSFLSEAIMEEVIYEDLPSNLCAIRDYIEKRGEK 483