Miyakogusa Predicted Gene
- Lj0g3v0165409.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0165409.1 tr|G7IYB6|G7IYB6_MEDTR Protein
TRIGALACTOSYLDIACYLGLYCEROL OS=Medicago truncatula GN=MTR_3g005100
PE,85.44,0,ABC TRANSPORTER PERMEASE PROTEIN-RELATED,NULL;
Permease,Permease domain; TIGR00056: conserved hypoth,CUFF.10374.1
(367 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G19800.1 | Symbols: TGD1 | trigalactosyldiacylglycerol 1 | ch... 465 e-131
AT1G19800.3 | Symbols: TGD1 | trigalactosyldiacylglycerol 1 | ch... 465 e-131
AT1G19800.2 | Symbols: TGD1 | trigalactosyldiacylglycerol 1 | ch... 465 e-131
>AT1G19800.1 | Symbols: TGD1 | trigalactosyldiacylglycerol 1 |
chr1:6846812-6847954 FORWARD LENGTH=350
Length = 350
Score = 465 bits (1196), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/361 (65%), Positives = 279/361 (77%), Gaps = 19/361 (5%)
Query: 8 HPVFCFSCRTNANI-SPVKIRAPYPSHLNWKCEFNGRPHIFKNSAIPIKPNRLYVLPDTG 66
H FCF R + + I+ P + F G+ + S+ PI+ RLYV +
Sbjct: 8 HQSFCFPHRVFPRFDASIGIKPPKLCQVG----FIGKTQSYGISS-PIRQRRLYVNLNAN 62
Query: 67 DGHPSASMIDGEMNTNHASASIIDDEMNPNHAPNSISPPFLSNWSPPRYLWRGLSVLVLA 126
DGHPS SM++ E +T N+AP+ + S WSP +Y+WRGLSV ++A
Sbjct: 63 DGHPSMSMLEEETSTE-------------NNAPSQEAELPFSKWSPSKYIWRGLSVPIIA 109
Query: 127 GQVIMKILKGKIHWRNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSV 186
GQV+++ILKGKIHWRNTLQQLER GP+S+GVCLLTS FVGMAFTIQFVREFTRLGLNRS+
Sbjct: 110 GQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFTRLGLNRSI 169
Query: 187 GGVLALAFSRELSPVVTAIVVAGRIGSAFAAELGTMQVSEQIDTLRVLGSDPVDYLVTPR 246
GGVLALAFSRELSPV+T+IVVAGR+GSAFAAELGTMQVSEQ DTLRVLG+DP+DYL+TPR
Sbjct: 170 GGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADPIDYLITPR 229
Query: 247 VIASCIAXXXXXXXXXXXGMASSAILADGVYGVSINIILDSAQRALRPWDIISAMIKSQV 306
VIASC+A GMASSA+L+D VYG+SINII+DSA RALRPWDI+SAMIKSQV
Sbjct: 230 VIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIVSAMIKSQV 289
Query: 307 FGAIISIVSCAWGVTTMGGAKGVGESTTSAVVLSLVGIFIADFALSCCFFQGAGDQLKNC 366
FGAIIS++SC+WGVTT GGAKGVGESTTSAVV+SLVGIFIADF LS FFQGAGD LKNC
Sbjct: 290 FGAIISVISCSWGVTTTGGAKGVGESTTSAVVMSLVGIFIADFVLSSFFFQGAGDSLKNC 349
Query: 367 M 367
+
Sbjct: 350 V 350
>AT1G19800.3 | Symbols: TGD1 | trigalactosyldiacylglycerol 1 |
chr1:6846812-6847954 FORWARD LENGTH=350
Length = 350
Score = 465 bits (1196), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/361 (65%), Positives = 279/361 (77%), Gaps = 19/361 (5%)
Query: 8 HPVFCFSCRTNANI-SPVKIRAPYPSHLNWKCEFNGRPHIFKNSAIPIKPNRLYVLPDTG 66
H FCF R + + I+ P + F G+ + S+ PI+ RLYV +
Sbjct: 8 HQSFCFPHRVFPRFDASIGIKPPKLCQVG----FIGKTQSYGISS-PIRQRRLYVNLNAN 62
Query: 67 DGHPSASMIDGEMNTNHASASIIDDEMNPNHAPNSISPPFLSNWSPPRYLWRGLSVLVLA 126
DGHPS SM++ E +T N+AP+ + S WSP +Y+WRGLSV ++A
Sbjct: 63 DGHPSMSMLEEETSTE-------------NNAPSQEAELPFSKWSPSKYIWRGLSVPIIA 109
Query: 127 GQVIMKILKGKIHWRNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSV 186
GQV+++ILKGKIHWRNTLQQLER GP+S+GVCLLTS FVGMAFTIQFVREFTRLGLNRS+
Sbjct: 110 GQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFTRLGLNRSI 169
Query: 187 GGVLALAFSRELSPVVTAIVVAGRIGSAFAAELGTMQVSEQIDTLRVLGSDPVDYLVTPR 246
GGVLALAFSRELSPV+T+IVVAGR+GSAFAAELGTMQVSEQ DTLRVLG+DP+DYL+TPR
Sbjct: 170 GGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADPIDYLITPR 229
Query: 247 VIASCIAXXXXXXXXXXXGMASSAILADGVYGVSINIILDSAQRALRPWDIISAMIKSQV 306
VIASC+A GMASSA+L+D VYG+SINII+DSA RALRPWDI+SAMIKSQV
Sbjct: 230 VIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIVSAMIKSQV 289
Query: 307 FGAIISIVSCAWGVTTMGGAKGVGESTTSAVVLSLVGIFIADFALSCCFFQGAGDQLKNC 366
FGAIIS++SC+WGVTT GGAKGVGESTTSAVV+SLVGIFIADF LS FFQGAGD LKNC
Sbjct: 290 FGAIISVISCSWGVTTTGGAKGVGESTTSAVVMSLVGIFIADFVLSSFFFQGAGDSLKNC 349
Query: 367 M 367
+
Sbjct: 350 V 350
>AT1G19800.2 | Symbols: TGD1 | trigalactosyldiacylglycerol 1 |
chr1:6846812-6847954 FORWARD LENGTH=350
Length = 350
Score = 465 bits (1196), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/361 (65%), Positives = 279/361 (77%), Gaps = 19/361 (5%)
Query: 8 HPVFCFSCRTNANI-SPVKIRAPYPSHLNWKCEFNGRPHIFKNSAIPIKPNRLYVLPDTG 66
H FCF R + + I+ P + F G+ + S+ PI+ RLYV +
Sbjct: 8 HQSFCFPHRVFPRFDASIGIKPPKLCQVG----FIGKTQSYGISS-PIRQRRLYVNLNAN 62
Query: 67 DGHPSASMIDGEMNTNHASASIIDDEMNPNHAPNSISPPFLSNWSPPRYLWRGLSVLVLA 126
DGHPS SM++ E +T N+AP+ + S WSP +Y+WRGLSV ++A
Sbjct: 63 DGHPSMSMLEEETSTE-------------NNAPSQEAELPFSKWSPSKYIWRGLSVPIIA 109
Query: 127 GQVIMKILKGKIHWRNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSV 186
GQV+++ILKGKIHWRNTLQQLER GP+S+GVCLLTS FVGMAFTIQFVREFTRLGLNRS+
Sbjct: 110 GQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFTRLGLNRSI 169
Query: 187 GGVLALAFSRELSPVVTAIVVAGRIGSAFAAELGTMQVSEQIDTLRVLGSDPVDYLVTPR 246
GGVLALAFSRELSPV+T+IVVAGR+GSAFAAELGTMQVSEQ DTLRVLG+DP+DYL+TPR
Sbjct: 170 GGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADPIDYLITPR 229
Query: 247 VIASCIAXXXXXXXXXXXGMASSAILADGVYGVSINIILDSAQRALRPWDIISAMIKSQV 306
VIASC+A GMASSA+L+D VYG+SINII+DSA RALRPWDI+SAMIKSQV
Sbjct: 230 VIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIVSAMIKSQV 289
Query: 307 FGAIISIVSCAWGVTTMGGAKGVGESTTSAVVLSLVGIFIADFALSCCFFQGAGDQLKNC 366
FGAIIS++SC+WGVTT GGAKGVGESTTSAVV+SLVGIFIADF LS FFQGAGD LKNC
Sbjct: 290 FGAIISVISCSWGVTTTGGAKGVGESTTSAVVMSLVGIFIADFVLSSFFFQGAGDSLKNC 349
Query: 367 M 367
+
Sbjct: 350 V 350