Miyakogusa Predicted Gene

Lj0g3v0165139.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0165139.1 tr|A9RWQ1|A9RWQ1_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_206317,46.02,2e-18,GLYCOSYLTRANSFERASE,GPI
mannosyltransferase; Glyco_transf_22,GPI mannosyltransferase;
seg,NULL,CUFF.10361.1
         (125 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G02145.3 | Symbols: ALG12, EBS4 | homolog of asparagine-linke...   131   1e-31
AT1G02145.1 | Symbols: ALG12, EBS4 | homolog of asparagine-linke...   131   1e-31
AT1G02145.4 | Symbols: ALG12, EBS4 | homolog of asparagine-linke...   130   2e-31
AT1G02145.2 | Symbols: ALG12, EBS4 | homolog of asparagine-linke...   130   3e-31

>AT1G02145.3 | Symbols: ALG12, EBS4 | homolog of asparagine-linked
           glycosylation 12 | chr1:404627-408485 FORWARD LENGTH=497
          Length = 497

 Score =  131 bits (329), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 66/100 (66%), Positives = 74/100 (74%), Gaps = 14/100 (14%)

Query: 1   MALGCIILYTLRFFRHQIRSKFGHQVEAFFVILTSVQFHFLFYCTRPLPNILALGLVNVM 60
           + LGCIIL TLRFFR QI+ KFG+QVE FFV+ TS+QFHFLFYCTRPLPNILALGL    
Sbjct: 104 LVLGCIILSTLRFFRIQIKKKFGNQVETFFVLFTSLQFHFLFYCTRPLPNILALGL---- 159

Query: 61  VLYFLLIYFVVNLAYGYWFEGRFYAALNSLIFATAVFRCD 100
                     VNLAYG W +G FY AL+ LIFAT +FRCD
Sbjct: 160 ----------VNLAYGNWLKGNFYPALSFLIFATVIFRCD 189


>AT1G02145.1 | Symbols: ALG12, EBS4 | homolog of asparagine-linked
           glycosylation 12 | chr1:404627-408485 FORWARD LENGTH=493
          Length = 493

 Score =  131 bits (329), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 66/100 (66%), Positives = 74/100 (74%), Gaps = 14/100 (14%)

Query: 1   MALGCIILYTLRFFRHQIRSKFGHQVEAFFVILTSVQFHFLFYCTRPLPNILALGLVNVM 60
           + LGCIIL TLRFFR QI+ KFG+QVE FFV+ TS+QFHFLFYCTRPLPNILALGL    
Sbjct: 100 LVLGCIILSTLRFFRIQIKKKFGNQVETFFVLFTSLQFHFLFYCTRPLPNILALGL---- 155

Query: 61  VLYFLLIYFVVNLAYGYWFEGRFYAALNSLIFATAVFRCD 100
                     VNLAYG W +G FY AL+ LIFAT +FRCD
Sbjct: 156 ----------VNLAYGNWLKGNFYPALSFLIFATVIFRCD 185


>AT1G02145.4 | Symbols: ALG12, EBS4 | homolog of asparagine-linked
           glycosylation 12 | chr1:404915-408485 FORWARD LENGTH=453
          Length = 453

 Score =  130 bits (328), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 66/100 (66%), Positives = 74/100 (74%), Gaps = 14/100 (14%)

Query: 1   MALGCIILYTLRFFRHQIRSKFGHQVEAFFVILTSVQFHFLFYCTRPLPNILALGLVNVM 60
           + LGCIIL TLRFFR QI+ KFG+QVE FFV+ TS+QFHFLFYCTRPLPNILALGL    
Sbjct: 60  LVLGCIILSTLRFFRIQIKKKFGNQVETFFVLFTSLQFHFLFYCTRPLPNILALGL---- 115

Query: 61  VLYFLLIYFVVNLAYGYWFEGRFYAALNSLIFATAVFRCD 100
                     VNLAYG W +G FY AL+ LIFAT +FRCD
Sbjct: 116 ----------VNLAYGNWLKGNFYPALSFLIFATVIFRCD 145


>AT1G02145.2 | Symbols: ALG12, EBS4 | homolog of asparagine-linked
           glycosylation 12 | chr1:404915-408485 FORWARD LENGTH=332
          Length = 332

 Score =  130 bits (326), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 66/100 (66%), Positives = 74/100 (74%), Gaps = 14/100 (14%)

Query: 1   MALGCIILYTLRFFRHQIRSKFGHQVEAFFVILTSVQFHFLFYCTRPLPNILALGLVNVM 60
           + LGCIIL TLRFFR QI+ KFG+QVE FFV+ TS+QFHFLFYCTRPLPNILALGL    
Sbjct: 60  LVLGCIILSTLRFFRIQIKKKFGNQVETFFVLFTSLQFHFLFYCTRPLPNILALGL---- 115

Query: 61  VLYFLLIYFVVNLAYGYWFEGRFYAALNSLIFATAVFRCD 100
                     VNLAYG W +G FY AL+ LIFAT +FRCD
Sbjct: 116 ----------VNLAYGNWLKGNFYPALSFLIFATVIFRCD 145