Miyakogusa Predicted Gene

Lj0g3v0164859.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0164859.2 tr|B4L585|B4L585_DROMO GI21567 OS=Drosophila
mojavensis GN=GI21567 PE=4 SV=1,26.36,0.0008,seg,NULL,CUFF.10343.2
         (231 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G17760.1 | Symbols: CSTF77, ATCSTF77 | Tetratricopeptide repe...   195   2e-50

>AT1G17760.1 | Symbols: CSTF77, ATCSTF77 | Tetratricopeptide repeat
           (TPR)-like superfamily protein | chr1:6110208-6116271
           REVERSE LENGTH=734
          Length = 734

 Score =  195 bits (496), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/258 (46%), Positives = 155/258 (60%), Gaps = 43/258 (16%)

Query: 1   MDLWPCSSNYLDQLARQEWLAKNINKRVEKSVMPNGSALLDKSSMATISTISSKVIYPDT 60
           MDLWPC+SN LD LARQE L KN+NK+  K+ +P+  A +   S+A+    SSKV+YPDT
Sbjct: 493 MDLWPCTSNDLDHLARQELLVKNLNKKAGKTNLPHVPAAI--GSVAS----SSKVVYPDT 546

Query: 61  SKMVLYDPKQ--------NPVAGSGTNAC----------------NEIXXXXXXXXXXXX 96
           S+MV+ DP +        NPVA S +N                  +EI            
Sbjct: 547 SQMVVQDPTKKSEFASSANPVAASASNTFPSTVTATATHGSASTFDEIPKTTPPALVAFL 606

Query: 97  XXXXXVEGPTPNVDIVLSICLQSDLPTGQSGKKTGAPTQSPAGPAPATSELSGSNKSHPV 156
                V+GPTPNVD+VLSICLQSD PTGQ+ K++ A   +P    P+ ++ SG  +    
Sbjct: 607 ANLPIVDGPTPNVDVVLSICLQSDFPTGQTVKQSFAAKGNP----PSQNDPSGPTR---- 658

Query: 157 QSGLSLKRTGNRQHGKRKELDRQEDDDTTTVQSQPLPRDAFRIRQYHKARASSTSQ---T 213
             G+S +   +R+  KRK+ DRQE+DDT TVQSQPLP D FR+RQ  KAR  +TS    T
Sbjct: 659 --GVSQRLPRDRRATKRKDSDRQEEDDTATVQSQPLPTDVFRLRQMRKARGIATSSQTPT 716

Query: 214 GSVSYGSAFSGDLSGSTG 231
           GS SYGSAFSG+LSGSTG
Sbjct: 717 GSTSYGSAFSGELSGSTG 734