Miyakogusa Predicted Gene

Lj0g3v0164319.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0164319.1 Non Chatacterized Hit- tr|I1KTV2|I1KTV2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25709
PE,90.16,0,DNA-glycosylase,DNA glycosylase;
Adenine_glyco,Methyladenine glycosylase; SUBFAMILY NOT NAMED,NULL;
,NODE_44168_length_1930_cov_169.880310.path2.1
         (122 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G12710.1 | Symbols:  | DNA glycosylase superfamily protein | ...   188   9e-49
AT5G44680.1 | Symbols:  | DNA glycosylase superfamily protein | ...   178   7e-46
AT1G80850.1 | Symbols:  | DNA glycosylase superfamily protein | ...   140   2e-34
AT5G57970.2 | Symbols:  | DNA glycosylase superfamily protein | ...   135   5e-33
AT5G57970.1 | Symbols:  | DNA glycosylase superfamily protein | ...   135   5e-33
AT1G13635.2 | Symbols:  | DNA glycosylase superfamily protein | ...   135   6e-33
AT1G13635.1 | Symbols:  | DNA glycosylase superfamily protein | ...   135   6e-33
AT1G15970.1 | Symbols:  | DNA glycosylase superfamily protein | ...   132   7e-32
AT1G75090.1 | Symbols:  | DNA glycosylase superfamily protein | ...   131   1e-31

>AT3G12710.1 | Symbols:  | DNA glycosylase superfamily protein |
           chr3:4040572-4041828 REVERSE LENGTH=312
          Length = 312

 Score =  188 bits (477), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 88/112 (78%), Positives = 98/112 (87%)

Query: 1   MMSISSEYGIEISKIRGVVDNANQILKVMKDFGSFDKYIWGFVNHKPISTQYKFGHKIPV 60
           M +IS EY IE+SK+RGVV+NA +I+++ K F S +KY+WGFVNHKPIST YK GHKIPV
Sbjct: 198 MNAISIEYKIEMSKVRGVVENAKKIVEIKKAFVSLEKYLWGFVNHKPISTNYKLGHKIPV 257

Query: 61  KTSKSESISKDMVRRGFRFVGPTVVHSFMQAAGLTNDHLITCHRHLQCTLAA 112
           KTSKSESISKDMVRRGFRFVGPTVVHSFMQAAGLTNDHLITC RH  CTL A
Sbjct: 258 KTSKSESISKDMVRRGFRFVGPTVVHSFMQAAGLTNDHLITCCRHAPCTLLA 309


>AT5G44680.1 | Symbols:  | DNA glycosylase superfamily protein |
           chr5:18024461-18025893 REVERSE LENGTH=353
          Length = 353

 Score =  178 bits (452), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 80/112 (71%), Positives = 95/112 (84%)

Query: 1   MMSISSEYGIEISKIRGVVDNANQILKVMKDFGSFDKYIWGFVNHKPISTQYKFGHKIPV 60
           + SI ++YGI +S++  VVDNA QILKV +D GSF+KYIWGF+ HKP++T+Y    KIPV
Sbjct: 240 IQSIVNDYGINLSQVLAVVDNAKQILKVKRDLGSFNKYIWGFMKHKPVTTKYTSCQKIPV 299

Query: 61  KTSKSESISKDMVRRGFRFVGPTVVHSFMQAAGLTNDHLITCHRHLQCTLAA 112
           KTSKSE+ISKDMVRRGFRFVGPTV+HS MQAAGLTNDHLITC RHL+CT  A
Sbjct: 300 KTSKSETISKDMVRRGFRFVGPTVIHSLMQAAGLTNDHLITCPRHLECTAMA 351


>AT1G80850.1 | Symbols:  | DNA glycosylase superfamily protein |
           chr1:30385607-30387272 REVERSE LENGTH=327
          Length = 327

 Score =  140 bits (352), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 59/95 (62%), Positives = 76/95 (80%)

Query: 14  KIRGVVDNANQILKVMKDFGSFDKYIWGFVNHKPISTQYKFGHKIPVKTSKSESISKDMV 73
           K+R +++NANQ+ K++  FGSFDKYIW FVN KP  +Q+++  ++PVKTSK+E ISKD+V
Sbjct: 225 KLRSILENANQVCKIIGAFGSFDKYIWNFVNQKPTQSQFRYPRQVPVKTSKAELISKDLV 284

Query: 74  RRGFRFVGPTVVHSFMQAAGLTNDHLITCHRHLQC 108
           RRGFR V PTV++SFMQ AGLTNDHL  C RH  C
Sbjct: 285 RRGFRSVSPTVIYSFMQTAGLTNDHLTCCFRHHDC 319


>AT5G57970.2 | Symbols:  | DNA glycosylase superfamily protein |
           chr5:23467316-23468910 FORWARD LENGTH=347
          Length = 347

 Score =  135 bits (341), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 58/95 (61%), Positives = 78/95 (82%)

Query: 14  KIRGVVDNANQILKVMKDFGSFDKYIWGFVNHKPISTQYKFGHKIPVKTSKSESISKDMV 73
           K+R V++NA QILKV++++GSFDKYIW FV +K I +++++  ++P KT K+E ISKD+V
Sbjct: 245 KLRAVIENARQILKVIEEYGSFDKYIWSFVKNKAIVSKFRYQRQVPAKTPKAEVISKDLV 304

Query: 74  RRGFRFVGPTVVHSFMQAAGLTNDHLITCHRHLQC 108
           RRGFR VGPTVV+SFMQAAG+TNDHL +C R   C
Sbjct: 305 RRGFRSVGPTVVYSFMQAAGITNDHLTSCFRFHHC 339


>AT5G57970.1 | Symbols:  | DNA glycosylase superfamily protein |
           chr5:23467316-23468910 FORWARD LENGTH=347
          Length = 347

 Score =  135 bits (341), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 58/95 (61%), Positives = 78/95 (82%)

Query: 14  KIRGVVDNANQILKVMKDFGSFDKYIWGFVNHKPISTQYKFGHKIPVKTSKSESISKDMV 73
           K+R V++NA QILKV++++GSFDKYIW FV +K I +++++  ++P KT K+E ISKD+V
Sbjct: 245 KLRAVIENARQILKVIEEYGSFDKYIWSFVKNKAIVSKFRYQRQVPAKTPKAEVISKDLV 304

Query: 74  RRGFRFVGPTVVHSFMQAAGLTNDHLITCHRHLQC 108
           RRGFR VGPTVV+SFMQAAG+TNDHL +C R   C
Sbjct: 305 RRGFRSVGPTVVYSFMQAAGITNDHLTSCFRFHHC 339


>AT1G13635.2 | Symbols:  | DNA glycosylase superfamily protein |
           chr1:4674248-4675784 FORWARD LENGTH=311
          Length = 311

 Score =  135 bits (340), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 58/106 (54%), Positives = 83/106 (78%), Gaps = 1/106 (0%)

Query: 10  IEISKIRGVVDNANQILKVMKDFGSFDKYIWGFVNHKPISTQYKFGHKIPVKTSKSESIS 69
           ++ S++R +VDNA  I KV+ +FGSF  ++WGF+++KPI  ++K+   +P+++ K+E IS
Sbjct: 202 LQESRVRCIVDNAKCITKVVNEFGSFSSFVWGFMDYKPIINKFKYSRNVPLRSPKAEIIS 261

Query: 70  KDMVRRGFRFVGPTVVHSFMQAAGLTNDHLITCHRHLQC-TLAARP 114
           KDM++RGFRFVGP +VHSFMQAAGLT DHL+ C RH  C +LA RP
Sbjct: 262 KDMIKRGFRFVGPVIVHSFMQAAGLTIDHLVDCFRHGDCVSLAERP 307


>AT1G13635.1 | Symbols:  | DNA glycosylase superfamily protein |
           chr1:4674248-4675784 FORWARD LENGTH=311
          Length = 311

 Score =  135 bits (340), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 58/106 (54%), Positives = 83/106 (78%), Gaps = 1/106 (0%)

Query: 10  IEISKIRGVVDNANQILKVMKDFGSFDKYIWGFVNHKPISTQYKFGHKIPVKTSKSESIS 69
           ++ S++R +VDNA  I KV+ +FGSF  ++WGF+++KPI  ++K+   +P+++ K+E IS
Sbjct: 202 LQESRVRCIVDNAKCITKVVNEFGSFSSFVWGFMDYKPIINKFKYSRNVPLRSPKAEIIS 261

Query: 70  KDMVRRGFRFVGPTVVHSFMQAAGLTNDHLITCHRHLQC-TLAARP 114
           KDM++RGFRFVGP +VHSFMQAAGLT DHL+ C RH  C +LA RP
Sbjct: 262 KDMIKRGFRFVGPVIVHSFMQAAGLTIDHLVDCFRHGDCVSLAERP 307


>AT1G15970.1 | Symbols:  | DNA glycosylase superfamily protein |
           chr1:5486544-5488494 REVERSE LENGTH=352
          Length = 352

 Score =  132 bits (331), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 56/99 (56%), Positives = 77/99 (77%)

Query: 14  KIRGVVDNANQILKVMKDFGSFDKYIWGFVNHKPISTQYKFGHKIPVKTSKSESISKDMV 73
           KIR ++DN+  + K++ + GS  KY+W FVN+KP  +Q+++  ++PVKTSK+E ISKD+V
Sbjct: 236 KIRSILDNSRHVRKIIAECGSLKKYMWNFVNNKPTQSQFRYQRQVPVKTSKAEFISKDLV 295

Query: 74  RRGFRFVGPTVVHSFMQAAGLTNDHLITCHRHLQCTLAA 112
           RRGFR V PTV++SFMQAAGLTNDHLI C R+  C + A
Sbjct: 296 RRGFRSVSPTVIYSFMQAAGLTNDHLIGCFRYQDCCVDA 334


>AT1G75090.1 | Symbols:  | DNA glycosylase superfamily protein |
           chr1:28187647-28189612 REVERSE LENGTH=329
          Length = 329

 Score =  131 bits (329), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 53/97 (54%), Positives = 76/97 (78%)

Query: 14  KIRGVVDNANQILKVMKDFGSFDKYIWGFVNHKPISTQYKFGHKIPVKTSKSESISKDMV 73
           K+R +V+NA  +LKV ++FGSF  Y W FVNHKP+   Y++G ++PVK+ K+E ISKDM+
Sbjct: 210 KLRAIVENAKSVLKVKQEFGSFSNYCWRFVNHKPLRNGYRYGRQVPVKSPKAEYISKDMM 269

Query: 74  RRGFRFVGPTVVHSFMQAAGLTNDHLITCHRHLQCTL 110
           +RGFR VGPTV++SF+QA+G+ NDHL  C R+ +C +
Sbjct: 270 QRGFRCVGPTVMYSFLQASGIVNDHLTACFRYQECNV 306