Miyakogusa Predicted Gene

Lj0g3v0164099.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0164099.1 Non Chatacterized Hit- tr|F6GY40|F6GY40_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,41.54,2e-17,HSP20-like chaperones,HSP20-like chaperone;
HSP20,Alpha crystallin/Hsp20 domain; HEAT-SHOCK PROTEIN ,CUFF.10245.1
         (937 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G76770.1 | Symbols:  | HSP20-like chaperones superfamily prot...   103   5e-22
AT1G76780.1 | Symbols:  | HSP20-like chaperones superfamily prot...    74   5e-13

>AT1G76770.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:28813569-28814378 FORWARD LENGTH=244
          Length = 244

 Score =  103 bits (258), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 55/132 (41%), Positives = 88/132 (66%), Gaps = 1/132 (0%)

Query: 1   MELALGLKITKTRDDIASISEYQLAKDK-GPVFQSRETNTMFILSAYLKGYKRNXXXXXX 59
           MEL LGLKIT+T+DD++S +++++A+D  G    SRETN++F L  +LKG+K++      
Sbjct: 1   MELELGLKITRTKDDVSSSTDFRVARDSFGHRSLSRETNSVFFLILHLKGFKKDGIDIEI 60

Query: 60  XXXXXXXXXXXXXPIQELLMMGWVMHRKEVKITGFNRVFKIPDGVNLDKIKAKYDEEEWS 119
                         ++E++++ WV  +KE +I  F +VF+IPD V LDKIKA+++EE+ +
Sbjct: 61  NKEGNLIKISGRKQVEEMVLVKWVEWKKETEIKEFKKVFRIPDIVILDKIKARFNEEDGT 120

Query: 120 INIFMPKLVKGI 131
           + + MPK VKGI
Sbjct: 121 LTVTMPKKVKGI 132


>AT1G76780.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:28816641-28822256 FORWARD LENGTH=1871
          Length = 1871

 Score = 73.9 bits (180), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 44/56 (78%)

Query: 77  LLMMGWVMHRKEVKITGFNRVFKIPDGVNLDKIKAKYDEEEWSINIFMPKLVKGIC 132
           ++M+ W+  RKEV+ + F +VF+IPD V+LDKIKA++D+++ ++ I MPK VKGI 
Sbjct: 1   MVMIRWMAWRKEVEFSVFKKVFRIPDTVDLDKIKARFDDDDATLTITMPKRVKGIS 56