Miyakogusa Predicted Gene

Lj0g3v0164069.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0164069.1 Non Chatacterized Hit- tr|C5X2U4|C5X2U4_SORBI
Putative uncharacterized protein Sb02g008135
(Fragment,45.45,1e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; DUF793,Protein BYPASS-related,CUFF.10250.1
         (386 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G18740.1 | Symbols:  | Protein of unknown function (DUF793) |...   454   e-128
AT1G74450.1 | Symbols:  | Protein of unknown function (DUF793) |...   447   e-126
AT1G43630.1 | Symbols:  | Protein of unknown function (DUF793) |...   425   e-119
AT1G63930.1 | Symbols: ROH1 | from the Czech 'roh' meaning 'corn...   275   5e-74
AT4G11300.1 | Symbols:  | Protein of unknown function (DUF793) |...   206   3e-53
AT4G23530.1 | Symbols:  | Protein of unknown function (DUF793) |...   193   2e-49

>AT1G18740.1 | Symbols:  | Protein of unknown function (DUF793) |
           chr1:6464125-6465273 FORWARD LENGTH=382
          Length = 382

 Score =  454 bits (1167), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 231/394 (58%), Positives = 295/394 (74%), Gaps = 30/394 (7%)

Query: 5   AEFQGS----ILSFRGAQVHSM----------EGSTFDPELDSFQKHVTDRFSELSSVSN 50
            +FQGS    +LS R  QV S           E ST + ELDSFQ+ V ++F +L++ SN
Sbjct: 4   TDFQGSFGRSLLSLRRDQVDSSTVVSGSSSHHEPSTMEVELDSFQRQVAEKFIDLNASSN 63

Query: 51  DELLSLSWIRKLLDSFICCQEEFRMILHNHKALVVKSPLDRMVGDFFERSVKALDVCNAI 110
           D LLSL WI KLLDSF+CCQEEFR I+ NH++ + KSP+DR++ D+FERS+KALDVCNAI
Sbjct: 64  D-LLSLEWIGKLLDSFLCCQEEFRAIVFNHRSQISKSPMDRLISDYFERSIKALDVCNAI 122

Query: 111 RDGIEQIRQWKKLLEIVLCALDQKKNIGEGQFRRAKKALVDLAIGMLDDKD-SNANSIAH 169
           RDGIEQIRQW+KL +IV+ ALD  + IGEGQ RRAKKAL+DLAIGMLD+KD  +  ++AH
Sbjct: 123 RDGIEQIRQWEKLADIVISALDSHRPIGEGQLRRAKKALIDLAIGMLDEKDHPSGTNLAH 182

Query: 170 RNRSFGRXXXXXXXXXXXXXXXLLGSSSTFGQFRSLSWSVSRNWSAARQLQAIGNNLSPP 229
           RNRSFGR                     + G FRSLSWSVSR+WSA++QLQA+ +NL+ P
Sbjct: 183 RNRSFGRVKD--------------SHHRSIGHFRSLSWSVSRSWSASKQLQALASNLATP 228

Query: 230 KASEIVATNGLALVVYTMSSILLFTMWALVAAIPCQDRGLNLHFSVPRQFLWAAPMTSLH 289
           + +++VA+NGLA+ VYTM+S+LLF MW LVAAIPCQDRGL ++F VPR F WAAP+ SLH
Sbjct: 229 RPNDVVASNGLAVPVYTMTSVLLFVMWVLVAAIPCQDRGLQVNFFVPRHFQWAAPVMSLH 288

Query: 290 DRILEESRKRERKNSCGLMREIQQIEKCARAMNELGDSVQFPLSEKKEEEVRHRVQDVVS 349
           D+I+EES++R+RKN CGL++EI +IEK +R MNEL DS+ FPL++ KE EV+ RV ++V 
Sbjct: 289 DKIVEESKRRDRKNCCGLLKEIDRIEKSSRLMNELIDSIHFPLNDDKEVEVKQRVDELVQ 348

Query: 350 VCEDLKEGLDPLECQVREVFRRIVCSRMDGLDSL 383
           V E L+ GLDP E +VREVF RIV SR + LDSL
Sbjct: 349 VREALRNGLDPFERKVREVFHRIVRSRTESLDSL 382


>AT1G74450.1 | Symbols:  | Protein of unknown function (DUF793) |
           chr1:27982737-27983930 FORWARD LENGTH=397
          Length = 397

 Score =  447 bits (1149), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 229/387 (59%), Positives = 295/387 (76%), Gaps = 29/387 (7%)

Query: 15  RGAQVHSMEGSTFDPELD-------SFQKHVTDRFSELSSVSNDELLSLSWIRKLLDSFI 67
           R   V+S+E +T  PEL        SFQ+ V +RF +L++ S ++LLSL W+ KLLDSF+
Sbjct: 19  RDTAVNSVESTTVTPELTQMEAELVSFQRKVAERFIDLNASSCEDLLSLEWVGKLLDSFL 78

Query: 68  CCQEEFRMILHNHKALVVKSPLDRMVGDFFERSVKALDVCNAIRDGIEQIRQWKKLLEIV 127
            CQEEFR I+ NH++++ K P+DR+V D+FERSVKALDVCNAIRDG+EQIRQW+KL+EIV
Sbjct: 79  SCQEEFRSIVINHRSMITKPPMDRLVSDYFERSVKALDVCNAIRDGVEQIRQWQKLIEIV 138

Query: 128 LCALDQ-------KKNIGEGQFRRAKKALVDLAIGMLDDKDSNANSIA--HRNRSFGRXX 178
           +CA +        K+ +GEGQFRRA+K L++LAIGMLD+KDS+++S++  HRNRSFGR  
Sbjct: 139 ICAFNNNGGGSSGKRPLGEGQFRRARKTLIELAIGMLDEKDSSSSSVSSQHRNRSFGRNK 198

Query: 179 XXXXXXXXXXXXXLLGSSSTFGQFRSLSWSVSRNWSAARQLQAIGNNLSPPKASEIVATN 238
                              T G FRSLSWSVSR+WSA++QLQAIGNNL+ P+AS+I ATN
Sbjct: 199 EQL-------------HHRTIGHFRSLSWSVSRSWSASKQLQAIGNNLATPRASDITATN 245

Query: 239 GLALVVYTMSSILLFTMWALVAAIPCQDRGLNLHFSVPRQFLWAAPMTSLHDRILEESRK 298
           GL + VYTM+++LLF MWALVAAIPCQDRGL +HF+VPR + W   + SLHDRI+EES+K
Sbjct: 246 GLIVPVYTMTTVLLFVMWALVAAIPCQDRGLQVHFNVPRNYQWGGSLMSLHDRIIEESKK 305

Query: 299 RERKNSCGLMREIQQIEKCARAMNELGDSVQFPLSEKKEEEVRHRVQDVVSVCEDLKEGL 358
           RERKN+CGL++EI Q EK +R MNEL DSVQFPLSE+KE EVR RV+++  + E LK GL
Sbjct: 306 RERKNTCGLLKEIHQFEKTSRLMNELVDSVQFPLSEEKEMEVRERVEELGKLQEALKNGL 365

Query: 359 DPLECQVREVFRRIVCSRMDGLDSLGR 385
           DP E +VREVF RIV SR +GLD++G+
Sbjct: 366 DPFERKVREVFHRIVRSRTEGLDTVGK 392


>AT1G43630.1 | Symbols:  | Protein of unknown function (DUF793) |
           chr1:16436445-16437686 REVERSE LENGTH=413
          Length = 413

 Score =  425 bits (1093), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 217/393 (55%), Positives = 293/393 (74%), Gaps = 28/393 (7%)

Query: 3   TKAEFQGSILSFRGAQVHSMEGSTF------DPELDSFQKHVTDRFSELSSVSND-ELLS 55
           T+  F  S LS R  Q H M+ ++F      + ELDSFQ+ V ++F +L++ +++ E+LS
Sbjct: 34  TEYSFGRSFLSLRRDQAHLMDPTSFSEPMTMEVELDSFQRQVAEKFIDLNASADEAEILS 93

Query: 56  LSWIRKLLDSFICCQEEFRMILHNHKALVVKSPLDRMVGDFFERSVKALDVCNAIRDGIE 115
           L WI KLLDSF+CCQE+FR+I+ NHK  ++K P+DR++ ++FERSVKALDVCNAIRDGIE
Sbjct: 94  LEWIGKLLDSFLCCQEDFRVIIFNHKPQLLKQPMDRLIEEYFERSVKALDVCNAIRDGIE 153

Query: 116 QIRQWKKLLEIVLCALD-QKKNIGEGQFRRAKKALVDLAIGMLDDKDSNANSIAHRNRSF 174
           QIRQW+KL+EIV+ ALD  ++ +GEG+  RAKKAL+DLAIGMLD+KDS   S  HRNRSF
Sbjct: 154 QIRQWQKLIEIVISALDTNQRQLGEGEIHRAKKALIDLAIGMLDEKDS---SNTHRNRSF 210

Query: 175 GRXXXXXXXXXXXXXXXLLGSSSTFGQFRSLSWSVSRNWSAARQLQAIGNNLSPPKASEI 234
            R                   +   G  RSLSWSVSR+WSA+RQLQ IGNNL+ P+AS++
Sbjct: 211 TRNK---------------DHNQHIGYIRSLSWSVSRSWSASRQLQGIGNNLATPRASDV 255

Query: 235 VATNGLALVVYTMSSILLFTMWALVAAIPCQDRGLNLHFSVPRQFLWAAPMTSLHDRILE 294
           +ATNGLAL VYTM+SILLF  W LVAAIPCQDRGL++HF  PR F WA P+ SLHD+I++
Sbjct: 256 MATNGLALTVYTMTSILLFVTWVLVAAIPCQDRGLHVHFYFPRHFQWAVPVMSLHDKIMD 315

Query: 295 ES-RKRERKNSCGLMREIQQIEKCARAMNELGDSVQFPLSEKK-EEEVRHRVQDVVSVCE 352
           ES ++ ++K  CGL+REI QIE+ +R +++L DS  F L+++K   EV+ RVQ++++VCE
Sbjct: 316 ESKKRDKKKKGCGLLREINQIERNSRMLSDLIDSDNFSLTDEKCTLEVKERVQELMNVCE 375

Query: 353 DLKEGLDPLECQVREVFRRIVCSRMDGLDSLGR 385
            +KEGLDP + +VR+VF +IV +R + LDSLG+
Sbjct: 376 AIKEGLDPFDRKVRDVFHQIVRTRTEALDSLGK 408


>AT1G63930.1 | Symbols: ROH1 | from the Czech 'roh' meaning 'corner'
           | chr1:23727927-23729174 FORWARD LENGTH=415
          Length = 415

 Score =  275 bits (702), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 150/416 (36%), Positives = 237/416 (56%), Gaps = 45/416 (10%)

Query: 1   MRTKAEFQGSIL---SFRGAQVHSMEGSTFDPELDSFQKHVTDRFSEL------------ 45
           MR   + QGS L   S R  Q   +       +L+ FQKH+ DRF+EL            
Sbjct: 1   MRPAQDNQGSFLGRISIRRNQFVDVNNEQEQEDLELFQKHIADRFTELLSPPQPPPSDEI 60

Query: 46  ----SSVSNDELLSLSWIRKLLDSFICCQEEFRMIL--HNHKALVVKSPLDRMVGDFFER 99
               S  + ++++S++W+RKL+D F+CC+ EF+ IL        + K P DR+V +  +R
Sbjct: 61  NTVASVAATEQIMSVTWLRKLMDVFLCCEAEFKAILLMGRDPTQISKPPFDRLVPEMLDR 120

Query: 100 SVKALDVCNAIRDGIEQIRQWKKLLEIVLCALDQKKNIGEGQFRRAKKALVDLAIGM-LD 158
           S+KALD+C A+ +GI+ +R +++L EI + AL+Q+  +G+G  RRAK+AL +L + + L+
Sbjct: 121 SIKALDICTAVVNGIDSVRHYQRLAEIAVTALEQRP-LGDGNVRRAKRALANLVVALSLE 179

Query: 159 DKDS---------NANSIAHRNRSFGRXXXXXXXXXXXXXXXLLGSSSTFGQFRSLSWSV 209
           DK++           N    R+ SFGR                    +T GQ +S SW+V
Sbjct: 180 DKENVSGGGGGGGGGNKTTERSWSFGRRSGGSSAASK--------GGATIGQLKSSSWAV 231

Query: 210 SRNWSAARQLQAIGNNLSPPKASEIVATNGLALVVYTMSSILLFTMWALVAAIPCQDR-G 268
            RNWSAA+Q+ A+  NL+PP+ +E     GL   ++ MS++++F MW L AA+PCQ+R G
Sbjct: 232 GRNWSAAKQIHAMTANLTPPRGNEAA---GLPQPMFIMSTVMVFVMWVLTAAVPCQERSG 288

Query: 269 LNLHFSVPRQFL-WAAPMTSLHDRILEESRKRERKNSCGLMREIQQIEKCARAMNELGDS 327
           L  H  VP + L WA  +  +H++I +E +K+E+K S GLM E+ ++EK   ++ E  D 
Sbjct: 289 LANHLPVPPKHLNWAQSLIGIHEKIGDEWKKKEKKGSAGLMEEMTRMEKLGHSLMEFADG 348

Query: 328 VQFPLSEKKEEEVRHRVQDVVSVCEDLKEGLDPLECQVREVFRRIVCSRMDGLDSL 383
             +P  +   E    +V ++  +C  ++E L PL+ Q+REVF RIV SR + L+ L
Sbjct: 349 FHYPAEKDAAESAAVQVAEMAEICRRMEEELVPLQQQIREVFHRIVRSRAEILEVL 404


>AT4G11300.1 | Symbols:  | Protein of unknown function (DUF793) |
           chr4:6872345-6873460 REVERSE LENGTH=371
          Length = 371

 Score =  206 bits (523), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 134/392 (34%), Positives = 209/392 (53%), Gaps = 32/392 (8%)

Query: 1   MRTKAEFQGSILS--FRGAQVHSME--GSTFDPELDSFQKHVTDRFSELSSVSNDE---- 52
           M    E Q S LS   R  QV SME        EL+ FQKHV +RF+EL   S+      
Sbjct: 1   MAPATEHQSSFLSRLSRRNQVVSMEVNHEQEQEELEDFQKHVAERFAELLPPSDSPESYP 60

Query: 53  LLSLSWIRKLLDSFICCQEEFRMILHNHKALVVKSPLDRMVGDFFERSVKALDVCNAIRD 112
           +LS+ W+RKLLD F+  + EF  +L ++ + + K PLD++V +  +R VKALD+C A+ +
Sbjct: 61  ILSIQWLRKLLDVFMSIESEFHSVLTSNPSQISKPPLDKLVPEMLDRIVKALDICTAVVN 120

Query: 113 GIEQIRQWKKLLEIVLCALDQKKNIGEGQFRRAKKALVDLAIGMLDDKDSNANSIAHRNR 172
           G++ +RQ ++  EI + AL Q   + +G  RRAK+AL  L   +  DK          N 
Sbjct: 121 GVDSVRQIQRCAEIAVTALKQTP-LSDGSVRRAKRALTSLLAALNADK----------NS 169

Query: 173 SFGRXXXXXXXXXXXXXXXLLGSSSTFGQFRSLSWSVSRNWSAARQLQAIGNNLSPPKAS 232
                                 S  + G     +  VS+NWSAA+Q+QA+  NL  P+  
Sbjct: 170 GSSGGGSGRRSSTDQWSSFGRRSGGSSGGGGGGAGCVSKNWSAAKQIQAMTANLVAPRGG 229

Query: 233 EIVATNGLALVVYTMSSILLFTMWALVAAIPCQ-DRGLNLHFSVPRQFLWAAPMTSLHDR 291
           E       A  +Y MSS+++  MW LV A+PCQ   GL +H  +P+  +WA    S+ +R
Sbjct: 230 E-------ASPMYIMSSVMVMVMWTLVVAVPCQTSNGLMVHVPLPKNQVWANAAVSISER 282

Query: 292 ILEESRKRERKNSCGLMREIQQIEKCARAMNELGDSVQFPLSEKKEEEVRHRVQDVVSVC 351
           + EE +++E +   GLM E+Q++E+    + E  +  +F      EE+V   V ++  +C
Sbjct: 283 VGEEMKRKETRGG-GLMEEMQRMERIGLKLMEFSEGFRF----NGEEDVVAEVAEMEEIC 337

Query: 352 EDLKEGLDPLECQVREVFRRIVCSRMDGLDSL 383
             +++GL+ L+ +VREVF R+V SR + L+ +
Sbjct: 338 RKMEDGLEGLQRRVREVFHRLVKSRSEILEVI 369


>AT4G23530.1 | Symbols:  | Protein of unknown function (DUF793) |
           chr4:12279171-12280361 FORWARD LENGTH=396
          Length = 396

 Score =  193 bits (491), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 143/410 (34%), Positives = 229/410 (55%), Gaps = 57/410 (13%)

Query: 1   MRTKAEFQGSILS---FRGAQVHSMEGSTFDP--ELDSFQKHVTDRFSELSSVSN----- 50
           M    EFQGS LS    R  Q+ SM+ +      EL+ FQKHV +RFS+L +  +     
Sbjct: 1   MARATEFQGSFLSRISIRRNQIVSMDVNHEQELEELEYFQKHVAERFSDLITSPSPPPSS 60

Query: 51  ---------DELLSLSWIRKLLDSFICCQEEFRMILHNHKALVVKSP-LDRMVGDFFERS 100
                    D +LS+ W++ LLD F+ C+ EF+ +L   +  + KSP L+R++ +  +R 
Sbjct: 61  SSSAVSQPSDPILSIPWLQNLLDVFMSCEAEFKAVLSTTQ--ISKSPSLERVLPEMLDRI 118

Query: 101 VKALDVCNAIRDGIEQIRQWKKLLEIVLCALDQKKNIGEGQFRRAKKALVDLAIGMLDDK 160
           +KALD+CNA+ +GI+ +RQ ++  EI + AL Q+  + +G  RRAK+AL  L IG+  D+
Sbjct: 119 LKALDLCNAVVNGIDSVRQSRRFAEIAVTALKQRP-LCDGSVRRAKRALTSLLIGLNADE 177

Query: 161 DSNANS----------IAHRNRSFGRXXXXXXXXXXXXXXXLLGSSSTFGQFRSLSWSVS 210
             + NS             R+ SFG                 +     +GQ       VS
Sbjct: 178 RRDRNSGGSGCSNQRRTTSRSWSFGTRSN-------------VTGGGLYGQV------VS 218

Query: 211 RNWSAARQLQAIGNNLSPPKASEIVATNGLALVVYTMSSILLFTMWALVAAIPCQDRG-L 269
           +NWSA++Q+QA+  NL  P+ +E    +G A+ VY MSS+++  MW LVAA+PCQ    L
Sbjct: 219 KNWSASKQIQAMVANLVLPRGAE---ASGPAMPVYIMSSVMVLVMWVLVAAVPCQTSSVL 275

Query: 270 NLHFSVPRQFLWAAPMTSLHDRILEESRKRERK-NSCGLMREIQQIEKCARAMNELGDSV 328
                +P+   WA+   S+ +RI EE +++E++    GLM E+Q++EK   ++ E  +  
Sbjct: 276 VAPLPLPKHQNWASAAMSIQERIGEEIKRKEKRCGGGGLMEEMQRMEKIGLSLMEFAERF 335

Query: 329 QFPLSEKKEEEVRHRVQDVVSVCEDLKEGLDPLECQVREVFRRIVCSRMD 378
           +FP  E++E EV  +V ++  +C  ++ GL+ L+ QVR+VF R+V SR++
Sbjct: 336 RFPADEEEEVEVAEKVDEMEEICRRMEVGLEDLQRQVRQVFHRLVRSRIE 385