Miyakogusa Predicted Gene

Lj0g3v0163679.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0163679.1 Non Chatacterized Hit- tr|I3SC69|I3SC69_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,95.02,0,t-snare
proteins,t-SNARE; seg,NULL; SYNTAXIN 5,NULL; SYNTAXIN,NULL; no
description,NULL; Syntaxin,Sy,CUFF.10287.1
         (204 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G24350.1 | Symbols: SYP32, ATSYP32 | syntaxin of plants  32 |...   204   2e-53
AT3G24350.2 | Symbols: SYP32 | syntaxin of plants  32 | chr3:883...   195   2e-50
AT5G05760.1 | Symbols: SYP31, ATSED5, ATSYP31, SED5 | syntaxin o...   139   2e-33

>AT3G24350.1 | Symbols: SYP32, ATSYP32 | syntaxin of plants  32 |
           chr3:8837733-8839402 FORWARD LENGTH=347
          Length = 347

 Score =  204 bits (520), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 113/205 (55%), Positives = 132/205 (64%), Gaps = 4/205 (1%)

Query: 1   MHVKSAQSSYRDRTHEFHSITERLKKSGSGPNGPXXXXXXXXXXXXXXXXXXXXXMQSEF 60
           M  +  QSSYRDR+ EF  I E L++S +    P                      +SEF
Sbjct: 1   MSARHGQSSYRDRSDEFFKIVETLRRSIAP--APAANNVPYGNNRNDGARREDLINKSEF 58

Query: 61  NKRASKIGYGIHXXXXXXXXXXXXXXXXXVFDDPTMEIQELTSVIKQDITALNSAVVDLQ 120
           NKRAS IG  I+                 VFDDPT EIQELT VIKQ+I+ALNSA+VDLQ
Sbjct: 59  NKRASHIGLAINQTSQKLSKLAKLAKRTSVFDDPTQEIQELTVVIKQEISALNSALVDLQ 118

Query: 121 LVSNSRNERGNASAD--TTSHSFTVVDDLKTRLMSTTKEFKDVLTMRTENLKVHENRRQL 178
           L  +S+N+ GN S D   ++HS TVVDDLK RLM TTKEFKDVLTMRTEN+KVHE+RRQL
Sbjct: 119 LFRSSQNDEGNNSRDRDKSTHSATVVDDLKYRLMDTTKEFKDVLTMRTENMKVHESRRQL 178

Query: 179 FSSSASKESANPFVRQRPLATRTAG 203
           FSS+ASKES NPFVRQRPLA + A 
Sbjct: 179 FSSNASKESTNPFVRQRPLAAKAAA 203


>AT3G24350.2 | Symbols: SYP32 | syntaxin of plants  32 |
           chr3:8837733-8839402 FORWARD LENGTH=361
          Length = 361

 Score =  195 bits (495), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 113/219 (51%), Positives = 132/219 (60%), Gaps = 18/219 (8%)

Query: 1   MHVKSAQSSYRDRTHEFHSITERLKKSGSGPNGPXXXXXXXXXXXXXXXXXXXXXMQSEF 60
           M  +  QSSYRDR+ EF  I E L++S +    P                      +SEF
Sbjct: 1   MSARHGQSSYRDRSDEFFKIVETLRRSIAP--APAANNVPYGNNRNDGARREDLINKSEF 58

Query: 61  NKRASKIGYGIHXXXXXXXXXX--------------XXXXXXXVFDDPTMEIQELTSVIK 106
           NKRAS IG  I+                               VFDDPT EIQELT VIK
Sbjct: 59  NKRASHIGLAINQTSQKLSKLAKRIRMVLRSRTDLFSVAKRTSVFDDPTQEIQELTVVIK 118

Query: 107 QDITALNSAVVDLQLVSNSRNERGNASAD--TTSHSFTVVDDLKTRLMSTTKEFKDVLTM 164
           Q+I+ALNSA+VDLQL  +S+N+ GN S D   ++HS TVVDDLK RLM TTKEFKDVLTM
Sbjct: 119 QEISALNSALVDLQLFRSSQNDEGNNSRDRDKSTHSATVVDDLKYRLMDTTKEFKDVLTM 178

Query: 165 RTENLKVHENRRQLFSSSASKESANPFVRQRPLATRTAG 203
           RTEN+KVHE+RRQLFSS+ASKES NPFVRQRPLA + A 
Sbjct: 179 RTENMKVHESRRQLFSSNASKESTNPFVRQRPLAAKAAA 217


>AT5G05760.1 | Symbols: SYP31, ATSED5, ATSYP31, SED5 | syntaxin of
           plants 31 | chr5:1729111-1730903 REVERSE LENGTH=336
          Length = 336

 Score =  139 bits (349), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 77/180 (42%), Positives = 101/180 (56%), Gaps = 8/180 (4%)

Query: 8   SSYRDRTHEFHSITERLKKSGSGPNGPXXXXXXXXXXXXXXXXXXXXXMQSEFNKRASKI 67
           S++RDRT E HS+++ LKK G+ P+                         SEFNK+AS+I
Sbjct: 3   STFRDRTVELHSLSQTLKKIGAIPS--------VHQDEDDPASSKRSSPGSEFNKKASRI 54

Query: 68  GYGIHXXXXXXXXXXXXXXXXXVFDDPTMEIQELTSVIKQDITALNSAVVDLQLVSNSRN 127
           G GI                  +F+D T+EIQELT +I+ DIT LN A+ DLQ + N   
Sbjct: 55  GLGIKETSQKITRLAKLAKQSTIFNDRTVEIQELTVLIRNDITGLNMALSDLQTLQNMEL 114

Query: 128 ERGNASADTTSHSFTVVDDLKTRLMSTTKEFKDVLTMRTENLKVHENRRQLFSSSASKES 187
             GN S D   H   V DDLKTRLM  TK+ +DVLT R+EN+K HENR+QLFS+  + +S
Sbjct: 115 ADGNYSQDQVGHYTAVCDDLKTRLMGATKQLQDVLTTRSENMKAHENRKQLFSTKNAVDS 174