Miyakogusa Predicted Gene

Lj0g3v0163669.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0163669.1 CUFF.10288.1
         (233 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G24350.2 | Symbols: SYP32 | syntaxin of plants  32 | chr3:883...   262   1e-70
AT3G24350.1 | Symbols: SYP32, ATSYP32 | syntaxin of plants  32 |...   262   1e-70
AT5G05760.1 | Symbols: SYP31, ATSED5, ATSYP31, SED5 | syntaxin o...   112   2e-25

>AT3G24350.2 | Symbols: SYP32 | syntaxin of plants  32 |
           chr3:8837733-8839402 FORWARD LENGTH=361
          Length = 361

 Score =  262 bits (670), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 146/235 (62%), Positives = 164/235 (69%), Gaps = 4/235 (1%)

Query: 2   EIQELTSVIKQDITALNSAVVDLQLLSNSRNESGNXXXXXXXXXXXXXXX--LKTRLMGA 59
           EIQELT VIKQ+I+ALNSA+VDLQL  +S+N+ GN                 LK RLM  
Sbjct: 109 EIQELTVVIKQEISALNSALVDLQLFRSSQNDEGNNSRDRDKSTHSATVVDDLKYRLMDT 168

Query: 60  TKEFKDVLTMRTENMKVHESRRQLFSASASKDSANPFVRQRPLXXXXXXXXXXXXXXXXX 119
           TKEFKDVLTMRTENMKVHESRRQLFS++ASK+S NPFVRQRPL                 
Sbjct: 169 TKEFKDVLTMRTENMKVHESRRQLFSSNASKESTNPFVRQRPLAAKAAASESVPLPWANG 228

Query: 120 XXXQSSSQLFPKKQVDGESQPLLXXXXXXXXXXXX-IVPLQDSYMQSRAEALQNVESTIH 178
               SSSQL P K  +GES PLL             +VPLQD+YMQ RAEAL  VESTIH
Sbjct: 229 SS-SSSSQLVPWKPGEGESSPLLQQSQQQQQQQQQQMVPLQDTYMQGRAEALHTVESTIH 287

Query: 179 ELSNIFNQLATLVSQQGEVAIRIDENMDDTLANVEGAQGALLKYLNSISSNRWLM 233
           ELS+IF QLAT+VSQQGE+AIRID+NM+DTLANVEGAQ  L +YLNSISSNRWLM
Sbjct: 288 ELSSIFTQLATMVSQQGEIAIRIDQNMEDTLANVEGAQSQLARYLNSISSNRWLM 342


>AT3G24350.1 | Symbols: SYP32, ATSYP32 | syntaxin of plants  32 |
           chr3:8837733-8839402 FORWARD LENGTH=347
          Length = 347

 Score =  262 bits (670), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 146/235 (62%), Positives = 164/235 (69%), Gaps = 4/235 (1%)

Query: 2   EIQELTSVIKQDITALNSAVVDLQLLSNSRNESGNXXXXXXXXXXXXXXX--LKTRLMGA 59
           EIQELT VIKQ+I+ALNSA+VDLQL  +S+N+ GN                 LK RLM  
Sbjct: 95  EIQELTVVIKQEISALNSALVDLQLFRSSQNDEGNNSRDRDKSTHSATVVDDLKYRLMDT 154

Query: 60  TKEFKDVLTMRTENMKVHESRRQLFSASASKDSANPFVRQRPLXXXXXXXXXXXXXXXXX 119
           TKEFKDVLTMRTENMKVHESRRQLFS++ASK+S NPFVRQRPL                 
Sbjct: 155 TKEFKDVLTMRTENMKVHESRRQLFSSNASKESTNPFVRQRPLAAKAAASESVPLPWANG 214

Query: 120 XXXQSSSQLFPKKQVDGESQPLLXXXXXXXXXXXX-IVPLQDSYMQSRAEALQNVESTIH 178
               SSSQL P K  +GES PLL             +VPLQD+YMQ RAEAL  VESTIH
Sbjct: 215 SS-SSSSQLVPWKPGEGESSPLLQQSQQQQQQQQQQMVPLQDTYMQGRAEALHTVESTIH 273

Query: 179 ELSNIFNQLATLVSQQGEVAIRIDENMDDTLANVEGAQGALLKYLNSISSNRWLM 233
           ELS+IF QLAT+VSQQGE+AIRID+NM+DTLANVEGAQ  L +YLNSISSNRWLM
Sbjct: 274 ELSSIFTQLATMVSQQGEIAIRIDQNMEDTLANVEGAQSQLARYLNSISSNRWLM 328


>AT5G05760.1 | Symbols: SYP31, ATSED5, ATSYP31, SED5 | syntaxin of
           plants 31 | chr5:1729111-1730903 REVERSE LENGTH=336
          Length = 336

 Score =  112 bits (280), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 54/78 (69%), Positives = 66/78 (84%)

Query: 156 VPLQDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEVAIRIDENMDDTLANVEGA 215
           VP Q++Y QSRA AL +VES I ELS IF QLAT+V+QQGE+AIRID+NMD++L NVEGA
Sbjct: 240 VPKQENYSQSRAVALHSVESRITELSGIFPQLATMVTQQGELAIRIDDNMDESLVNVEGA 299

Query: 216 QGALLKYLNSISSNRWLM 233
           + ALL++L  ISSNRWLM
Sbjct: 300 RSALLQHLTRISSNRWLM 317



 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/92 (52%), Positives = 58/92 (63%)

Query: 1   MEIQELTSVIKQDITALNSAVVDLQLLSNSRNESGNXXXXXXXXXXXXXXXLKTRLMGAT 60
           +EIQELT +I+ DIT LN A+ DLQ L N     GN               LKTRLMGAT
Sbjct: 83  VEIQELTVLIRNDITGLNMALSDLQTLQNMELADGNYSQDQVGHYTAVCDDLKTRLMGAT 142

Query: 61  KEFKDVLTMRTENMKVHESRRQLFSASASKDS 92
           K+ +DVLT R+ENMK HE+R+QLFS   + DS
Sbjct: 143 KQLQDVLTTRSENMKAHENRKQLFSTKNAVDS 174