Miyakogusa Predicted Gene

Lj0g3v0163519.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0163519.1 Non Chatacterized Hit- tr|K3Y967|K3Y967_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si010731,67.44,4e-19,coiled-coil,NULL,CUFF.10202.1
         (121 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G53800.1 | Symbols:  | unknown protein; Has 30201 Blast hits ...   178   9e-46

>AT5G53800.1 | Symbols:  | unknown protein; Has 30201 Blast hits to
           17322 proteins in 780 species: Archae - 12; Bacteria -
           1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
           Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
           BLink). | chr5:21848180-21849935 FORWARD LENGTH=351
          Length = 351

 Score =  178 bits (451), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 84/121 (69%), Positives = 99/121 (81%)

Query: 1   MFKAFMEDHNTATFPSKKYYNLDAYYRRQMEKELKKGFKKVPAKERTVFNDEEQRRLELL 60
           MFK FMEDHNT TF SKKYY++D YYR ++EKE+KKG KK    ERTVFNDEEQRRLE+ 
Sbjct: 231 MFKDFMEDHNTGTFTSKKYYDIDGYYRLKLEKEMKKGLKKAGISERTVFNDEEQRRLEMQ 290

Query: 61  QAREKHKEEQVRSLKHSMESGMAQAMKEQAQLREEMAYQYKLGNFEAAAAIQRRVDPDPA 120
           + RE+ KEE+V +LK SME GMAQAMKEQA+L+EEM Y YK+G+ E AAAIQRR+DPD  
Sbjct: 291 ELRERQKEEEVLALKRSMEGGMAQAMKEQARLKEEMVYLYKIGDMEGAAAIQRRLDPDVP 350

Query: 121 M 121
           M
Sbjct: 351 M 351