Miyakogusa Predicted Gene

Lj0g3v0163179.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0163179.1 Non Chatacterized Hit- tr|B9RRG6|B9RRG6_RICCO
Chromatin regulatory protein sir2, putative OS=Ricinus,60.44,3e-19,
,gene.g12508.t1.1
         (150 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G09230.7 | Symbols: SRT2 | sirtuin 2 | chr5:2871559-2873613 F...   120   4e-28
AT5G09230.1 | Symbols: SRT2, AtSRT2 | sirtuin 2 | chr5:2871655-2...   120   4e-28
AT5G09230.2 | Symbols: SRT2 | sirtuin 2 | chr5:2871655-2873613 F...   120   4e-28
AT5G09230.5 | Symbols: SRT2 | sirtuin 2 | chr5:2871839-2873613 F...   120   4e-28
AT5G09230.3 | Symbols: SRT2 | sirtuin 2 | chr5:2871655-2873275 F...   119   5e-28

>AT5G09230.7 | Symbols: SRT2 | sirtuin 2 | chr5:2871559-2873613
           FORWARD LENGTH=376
          Length = 376

 Score =  120 bits (301), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 55/99 (55%), Positives = 76/99 (76%), Gaps = 8/99 (8%)

Query: 58  LLPFKGCVKFVQTSWRISAPGTLPINDEKAPSNALRDKKVVPDADPPSAKDLNLLYQFFD 117
           ++ FKGC +FV+T+ R+S PG    N+ KAP   LRD+K+VPDADPP+ +D++ LY+ F+
Sbjct: 34  VMLFKGCRRFVRTTCRVSIPGGSLGNESKAPPRFLRDRKIVPDADPPNMEDIHKLYRLFE 93

Query: 118 QSTKLTVLTGAGISTD--------PNGAYSSGFRPITHQ 148
           QS++LT+LTGAG+ST+        PNGAYSSGF+PITHQ
Sbjct: 94  QSSRLTILTGAGVSTECGIPDYRSPNGAYSSGFKPITHQ 132


>AT5G09230.1 | Symbols: SRT2, AtSRT2 | sirtuin 2 |
           chr5:2871655-2873613 FORWARD LENGTH=373
          Length = 373

 Score =  120 bits (301), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 55/99 (55%), Positives = 76/99 (76%), Gaps = 8/99 (8%)

Query: 58  LLPFKGCVKFVQTSWRISAPGTLPINDEKAPSNALRDKKVVPDADPPSAKDLNLLYQFFD 117
           ++ FKGC +FV+T+ R+S PG    N+ KAP   LRD+K+VPDADPP+ +D++ LY+ F+
Sbjct: 31  VMLFKGCRRFVRTTCRVSIPGGSLGNESKAPPRFLRDRKIVPDADPPNMEDIHKLYRLFE 90

Query: 118 QSTKLTVLTGAGISTD--------PNGAYSSGFRPITHQ 148
           QS++LT+LTGAG+ST+        PNGAYSSGF+PITHQ
Sbjct: 91  QSSRLTILTGAGVSTECGIPDYRSPNGAYSSGFKPITHQ 129


>AT5G09230.2 | Symbols: SRT2 | sirtuin 2 | chr5:2871655-2873613
           FORWARD LENGTH=373
          Length = 373

 Score =  120 bits (301), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 55/99 (55%), Positives = 76/99 (76%), Gaps = 8/99 (8%)

Query: 58  LLPFKGCVKFVQTSWRISAPGTLPINDEKAPSNALRDKKVVPDADPPSAKDLNLLYQFFD 117
           ++ FKGC +FV+T+ R+S PG    N+ KAP   LRD+K+VPDADPP+ +D++ LY+ F+
Sbjct: 31  VMLFKGCRRFVRTTCRVSIPGGSLGNESKAPPRFLRDRKIVPDADPPNMEDIHKLYRLFE 90

Query: 118 QSTKLTVLTGAGISTD--------PNGAYSSGFRPITHQ 148
           QS++LT+LTGAG+ST+        PNGAYSSGF+PITHQ
Sbjct: 91  QSSRLTILTGAGVSTECGIPDYRSPNGAYSSGFKPITHQ 129


>AT5G09230.5 | Symbols: SRT2 | sirtuin 2 | chr5:2871839-2873613
           FORWARD LENGTH=354
          Length = 354

 Score =  120 bits (300), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 55/99 (55%), Positives = 76/99 (76%), Gaps = 8/99 (8%)

Query: 58  LLPFKGCVKFVQTSWRISAPGTLPINDEKAPSNALRDKKVVPDADPPSAKDLNLLYQFFD 117
           ++ FKGC +FV+T+ R+S PG    N+ KAP   LRD+K+VPDADPP+ +D++ LY+ F+
Sbjct: 12  VMLFKGCRRFVRTTCRVSIPGGSLGNESKAPPRFLRDRKIVPDADPPNMEDIHKLYRLFE 71

Query: 118 QSTKLTVLTGAGISTD--------PNGAYSSGFRPITHQ 148
           QS++LT+LTGAG+ST+        PNGAYSSGF+PITHQ
Sbjct: 72  QSSRLTILTGAGVSTECGIPDYRSPNGAYSSGFKPITHQ 110


>AT5G09230.3 | Symbols: SRT2 | sirtuin 2 | chr5:2871655-2873275
           FORWARD LENGTH=324
          Length = 324

 Score =  119 bits (299), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 55/99 (55%), Positives = 76/99 (76%), Gaps = 8/99 (8%)

Query: 58  LLPFKGCVKFVQTSWRISAPGTLPINDEKAPSNALRDKKVVPDADPPSAKDLNLLYQFFD 117
           ++ FKGC +FV+T+ R+S PG    N+ KAP   LRD+K+VPDADPP+ +D++ LY+ F+
Sbjct: 31  VMLFKGCRRFVRTTCRVSIPGGSLGNESKAPPRFLRDRKIVPDADPPNMEDIHKLYRLFE 90

Query: 118 QSTKLTVLTGAGISTD--------PNGAYSSGFRPITHQ 148
           QS++LT+LTGAG+ST+        PNGAYSSGF+PITHQ
Sbjct: 91  QSSRLTILTGAGVSTECGIPDYRSPNGAYSSGFKPITHQ 129