Miyakogusa Predicted Gene

Lj0g3v0163089.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0163089.1 Non Chatacterized Hit- tr|G7J8P4|G7J8P4_MEDTR
Oxidoreductase, putative OS=Medicago truncatula
GN=MTR,80.29,0,NAD(P)-binding Rossmann-fold domains,NULL;
GFO_IDH_MocA,Oxidoreductase, N-terminal; seg,NULL; OXIDOR,CUFF.10171.1
         (245 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G09670.1 | Symbols:  | Oxidoreductase family protein | chr4:6...   204   5e-53
AT1G66130.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...   182   2e-46
AT1G34200.1 | Symbols:  | Glyceraldehyde-3-phosphate dehydrogena...   181   3e-46

>AT4G09670.1 | Symbols:  | Oxidoreductase family protein |
           chr4:6107382-6109049 REVERSE LENGTH=362
          Length = 362

 Score =  204 bits (518), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 94/207 (45%), Positives = 133/207 (64%), Gaps = 2/207 (0%)

Query: 1   MAENETIRFGIIGCXXXXXXXXXXXXXXPNATLSAIASRSKQKANTFAAENQLPATVRIY 60
           MA    IR G++GC              PNAT+S +ASRS +KA  FA  N  P + +I+
Sbjct: 1   MATETQIRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIH 60

Query: 61  GSYDEVVEDPGVDAVYIPLPTSLHVRWAVAAASKGKHVLVEKPAALDVAQLDLILEACES 120
           GSY+ ++EDP +DA+Y+PLPTSLHV WA+ AA KGKH+L+EKP A++V + D I++ACE+
Sbjct: 61  GSYESLLEDPEIDALYVPLPTSLHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEA 120

Query: 121 NGVQFMDGSMWLHHPRTAHMEQLLSLSHSTTVGPVQFIHSTSTMPVPPEFLENNIRVKPX 180
           NGVQ MDG+MW+H+PRTA +++   LS S   G ++ + S  +     +FL+N+IRVKP 
Sbjct: 121 NGVQIMDGTMWVHNPRTALLKEF--LSDSERFGQLKTVQSCFSFAGDEDFLKNDIRVKPG 178

Query: 181 XXXXXXXXXXXWYCIGASLWAKSYNLP 207
                      WY I A+L A ++ LP
Sbjct: 179 LDGLGALGDAGWYAIRATLLANNFELP 205


>AT1G66130.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr1:24615040-24616742 FORWARD LENGTH=364
          Length = 364

 Score =  182 bits (462), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 94/208 (45%), Positives = 124/208 (59%), Gaps = 5/208 (2%)

Query: 1   MAENETIRFGIIGCXXXXXXXXXXXXXXPNATLSAIASRSKQKANTFAAENQL-PATVRI 59
           M++ +T+RFG++GC               NA + AI+  S + A TFA  N L P TV I
Sbjct: 1   MSDTKTVRFGLLGCIRFASKFVRTVTESSNAVIIAISDPSLETAKTFATGNNLSPETVTI 60

Query: 60  YGSYDEVVEDPGVDAVYIPLPTSLHVRWAVAAASKGKHVLVEKPAALDVAQLDLILEACE 119
           YGSY+E++ D  VDAVY+ +P +   RWAV AA K KHVLVEKP A D  +L+ I+EACE
Sbjct: 61  YGSYEELLNDANVDAVYLTMPVTQRARWAVTAAEKKKHVLVEKPPAQDATELEKIVEACE 120

Query: 120 SNGVQFMDGSMWLHHPRTAHMEQLLSLSHSTTVGPVQFIHSTSTMPVPPEFLENNIRVKP 179
            NGVQFMDG++WLHH RT  +    ++  S  +G V+ ++ST T PVP + LE     K 
Sbjct: 121 YNGVQFMDGTIWLHHQRTVKIRD--TMFDSGLLGDVRHMYSTMTTPVPEQVLER--LTKE 176

Query: 180 XXXXXXXXXXXXWYCIGASLWAKSYNLP 207
                       WY IGA+LWA SY +P
Sbjct: 177 AMGLAGAIGELGWYPIGAALWAMSYQMP 204


>AT1G34200.1 | Symbols:  | Glyceraldehyde-3-phosphate
           dehydrogenase-like family protein |
           chr1:12455793-12456935 FORWARD LENGTH=352
          Length = 352

 Score =  181 bits (460), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 89/222 (40%), Positives = 131/222 (59%), Gaps = 3/222 (1%)

Query: 1   MAENETIRFGIIGCXXXXXXXXXXXXXXPNATLSAIASRSK-QKANTFAAENQLPATVRI 59
           M+ +  IR G++ C              PNAT+SAIA+ S  ++A +FA  N  P   ++
Sbjct: 1   MSGDNQIRIGLLSCTNKVRKLSRAINLSPNATISAIATTSSIEEAKSFAKSNNFPPNTKL 60

Query: 60  YGSYDEVVEDPGVDAVYIPLPTSLHVRWAVAAASKGKHVLVEKPAALDVAQLDLILEACE 119
           + SY+ ++EDP VDAVY P+PT LHV WA  AA KGKH+L++KP AL+VA+ D I+EACE
Sbjct: 61  HSSYESLLEDPDVDAVYFPIPTRLHVEWATLAAIKGKHILLDKPVALNVAEFDQIVEACE 120

Query: 120 SNGVQFMDGSMWLHHPRTAHMEQLLSLSHSTTVGPVQFIHSTSTMPVPPEFLENNIRVKP 179
            NGVQFMDG+ W+H PRT  +++ ++   S   G ++ ++S  +     +FL+++IRVKP
Sbjct: 121 VNGVQFMDGTQWMHSPRTDKIKEFVNDLES--FGQIKSVYSCFSFAASDDFLKHDIRVKP 178

Query: 180 XXXXXXXXXXXXWYCIGASLWAKSYNLPTKSYCLSQPLCSGA 221
                       WY I A L   ++ LP     LS  + + A
Sbjct: 179 GLDGLGALGDAGWYTIQAILLVNNFKLPKTVTALSGSVLNDA 220