Miyakogusa Predicted Gene
- Lj0g3v0162339.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0162339.1 tr|B9IEL1|B9IEL1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_903433 PE=4
SV=1,30.46,4e-18,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; PPR: pentatricopeptide repeat domain,P,CUFF.10102.1
(306 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 326 1e-89
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 326 1e-89
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 2e-52
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 9e-31
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 127 1e-29
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 1e-29
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 2e-29
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 5e-28
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 8e-28
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 1e-27
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 3e-27
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 2e-26
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 2e-25
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 4e-25
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 1e-24
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 2e-24
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 2e-24
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 4e-24
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 102 4e-22
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 5e-22
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 5e-22
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 5e-22
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 9e-22
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 6e-21
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 8e-21
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 8e-21
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 1e-20
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 1e-20
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 2e-20
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 2e-20
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 95 7e-20
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 9e-20
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 2e-19
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 2e-19
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 3e-19
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 4e-19
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 4e-19
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 5e-19
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 6e-19
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 6e-19
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 6e-19
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 6e-19
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 91 7e-19
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 8e-19
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 2e-18
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 2e-18
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 89 3e-18
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 3e-18
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 3e-18
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 89 4e-18
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 4e-18
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 5e-18
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 5e-18
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 88 8e-18
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 9e-18
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 1e-17
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 1e-17
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 87 1e-17
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 2e-17
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 2e-17
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 2e-17
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 4e-17
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 5e-17
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 5e-17
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 6e-17
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 8e-17
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 8e-17
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 8e-17
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 8e-17
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 8e-17
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 8e-17
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 9e-17
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 1e-16
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 2e-16
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 83 2e-16
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 83 2e-16
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 2e-16
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 2e-16
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 3e-16
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 4e-16
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 82 4e-16
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 4e-16
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 4e-16
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 4e-16
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 5e-16
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 6e-16
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 7e-16
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 8e-16
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 9e-16
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 9e-16
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 1e-15
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 2e-15
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 3e-15
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 3e-15
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 5e-15
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 6e-15
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 6e-15
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 7e-15
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 8e-15
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 78 9e-15
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 9e-15
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 9e-15
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 77 2e-14
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 2e-14
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 4e-14
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 5e-14
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 72 7e-13
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 9e-13
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 71 1e-12
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 69 3e-12
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 3e-12
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 3e-12
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 69 4e-12
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 8e-12
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 8e-12
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 9e-12
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 67 1e-11
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 67 2e-11
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 67 2e-11
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 66 2e-11
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 2e-11
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 66 3e-11
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 65 5e-11
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 6e-11
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 1e-10
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 64 2e-10
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 64 2e-10
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 63 2e-10
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 63 3e-10
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 62 3e-10
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 8e-10
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 8e-10
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 9e-10
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 9e-10
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 59 5e-09
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 7e-09
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 9e-09
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 56 3e-08
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 55 5e-08
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 55 5e-08
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 55 5e-08
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 54 1e-07
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 1e-07
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 1e-06
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 2e-06
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 49 4e-06
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 49 6e-06
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 8e-06
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 8e-06
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 8e-06
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 9e-06
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 1e-05
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 326 bits (836), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 149/266 (56%), Positives = 200/266 (75%), Gaps = 1/266 (0%)
Query: 41 DILTSKVAKGSSEEEIIRSLCNDQACDAIHLSPNLINILLRRYKDDWKSALGLFKWASLH 100
+++ + SE+++ + L +D+ C ++LS L++ LL R++DDW+SALG+ KWA
Sbjct: 55 NVIVGRDGDRDSEDDVFKRLSSDEICKRVNLSDGLVHKLLHRFRDDWRSALGILKWAESC 114
Query: 101 SNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWAD 160
+HS ++YDM VDILG+ K D++++ +++MR + ++TLNT+AK+MRRF GAG+W +
Sbjct: 115 KGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGD-KLVTLNTVAKIMRRFAGAGEWEE 173
Query: 161 AVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHG 220
AV IFD L GLEKNTESMNLLLDTLCKE+ VEQAR + L+LK HI PNAHTFNIFIHG
Sbjct: 174 AVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHG 233
Query: 221 WCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPN 280
WCK RVEEA WTIQEMKG+G RPCVISY+TII+CYC + F KVYE+L EM+A PN
Sbjct: 234 WCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPN 293
Query: 281 VVTYTIIMCALAKAEKFDEALQVIER 306
+TYT IM +L ++F+EAL+V R
Sbjct: 294 SITYTTIMSSLNAQKEFEEALRVATR 319
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 134/303 (44%), Gaps = 48/303 (15%)
Query: 25 RGFRHQEQCQSLMRSVDILTSKVAKGSSEEEIIRSLCNDQACDAIHLSPNLINILLRRYK 84
+G +H + +VDIL K K +E + + D+ ++ N + ++RR+
Sbjct: 115 KGHKHSSDAYDM--AVDIL-GKAKKWDRMKEFVERMRGDKL-----VTLNTVAKIMRRFA 166
Query: 85 D--DWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQM--------- 133
+W+ A+G+F + + ES ++++D L + K +++ R +L Q+
Sbjct: 167 GAGEWEEAVGIFDRLG-EFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAH 225
Query: 134 -------------RCEGSIITLN------------TIAKVMRRFVGAGQWADAVRIFDDL 168
R E ++ T+ + ++R + ++ + ++
Sbjct: 226 TFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEM 285
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRV 227
+ G N+ + ++ +L ++ E+A ++ +K+ P++ +N IH + R+
Sbjct: 286 EANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRL 345
Query: 228 EEAHWTIQ-EMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQD-CSPNVVTYT 285
EEA + EM G +Y+++I YC+ K ELL EM++ + C+P+V TY
Sbjct: 346 EEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQ 405
Query: 286 IIM 288
++
Sbjct: 406 PLL 408
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 326 bits (836), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 149/266 (56%), Positives = 200/266 (75%), Gaps = 1/266 (0%)
Query: 41 DILTSKVAKGSSEEEIIRSLCNDQACDAIHLSPNLINILLRRYKDDWKSALGLFKWASLH 100
+++ + SE+++ + L +D+ C ++LS L++ LL R++DDW+SALG+ KWA
Sbjct: 55 NVIVGRDGDRDSEDDVFKRLSSDEICKRVNLSDGLVHKLLHRFRDDWRSALGILKWAESC 114
Query: 101 SNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWAD 160
+HS ++YDM VDILG+ K D++++ +++MR + ++TLNT+AK+MRRF GAG+W +
Sbjct: 115 KGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGD-KLVTLNTVAKIMRRFAGAGEWEE 173
Query: 161 AVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHG 220
AV IFD L GLEKNTESMNLLLDTLCKE+ VEQAR + L+LK HI PNAHTFNIFIHG
Sbjct: 174 AVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHG 233
Query: 221 WCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPN 280
WCK RVEEA WTIQEMKG+G RPCVISY+TII+CYC + F KVYE+L EM+A PN
Sbjct: 234 WCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPN 293
Query: 281 VVTYTIIMCALAKAEKFDEALQVIER 306
+TYT IM +L ++F+EAL+V R
Sbjct: 294 SITYTTIMSSLNAQKEFEEALRVATR 319
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 134/303 (44%), Gaps = 48/303 (15%)
Query: 25 RGFRHQEQCQSLMRSVDILTSKVAKGSSEEEIIRSLCNDQACDAIHLSPNLINILLRRYK 84
+G +H + +VDIL K K +E + + D+ ++ N + ++RR+
Sbjct: 115 KGHKHSSDAYDM--AVDIL-GKAKKWDRMKEFVERMRGDKL-----VTLNTVAKIMRRFA 166
Query: 85 D--DWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQM--------- 133
+W+ A+G+F + + ES ++++D L + K +++ R +L Q+
Sbjct: 167 GAGEWEEAVGIFDRLG-EFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAH 225
Query: 134 -------------RCEGSIITLN------------TIAKVMRRFVGAGQWADAVRIFDDL 168
R E ++ T+ + ++R + ++ + ++
Sbjct: 226 TFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEM 285
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRV 227
+ G N+ + ++ +L ++ E+A ++ +K+ P++ +N IH + R+
Sbjct: 286 EANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRL 345
Query: 228 EEAHWTIQ-EMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQD-CSPNVVTYT 285
EEA + EM G +Y+++I YC+ K ELL EM++ + C+P+V TY
Sbjct: 346 EEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQ 405
Query: 286 IIM 288
++
Sbjct: 406 PLL 408
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/261 (37%), Positives = 170/261 (65%), Gaps = 7/261 (2%)
Query: 49 KGSSEEEIIRSLCNDQACDAIHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPE 108
K +S E++++ L CD + ++ +L+ +LRR+ + W A G F WA+ + + HS
Sbjct: 112 KDTSHEDVVKELSK---CDVV-VTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGH 167
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRC--EGSIITLNTIAKVMRRFVGAGQWADAVRIFD 166
+Y+ MVD+LG+ + D + +L+++M E ++TL+T++KVMRR +G++ AV F
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFL 227
Query: 167 DLQ-TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIR 225
+++ + G++ +T +MN L+D L KE +E A +++L+L I P+A TFNI IHG+CK R
Sbjct: 228 EMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKAR 287
Query: 226 RVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYT 285
+ ++A + MK P V++Y++ ++ YC E +F +V E+L+EM+ C+PNVVTYT
Sbjct: 288 KFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYT 347
Query: 286 IIMCALAKAEKFDEALQVIER 306
I+M +L K+++ EAL V E+
Sbjct: 348 IVMHSLGKSKQVAEALGVYEK 368
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 130 bits (328), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 119/238 (50%), Gaps = 1/238 (0%)
Query: 68 AIHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLR 127
+ L P LI +L R D F WA+ + HS E Y MV IL +M+ +
Sbjct: 108 GVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVW 167
Query: 128 DLLDQMRCEGS-IITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDT 186
L+++MR E +I +++RF A A+ + D++ G E + LLD
Sbjct: 168 GLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDA 227
Query: 187 LCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCV 246
LCK V+ A +++ +++ N F ++GWC++ ++ EA + + +M G P +
Sbjct: 228 LCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDI 287
Query: 247 ISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+ Y+ ++ Y N + Y+LL +M+ + PN YT+++ AL K ++ +EA++V
Sbjct: 288 VDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVF 345
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 98/186 (52%), Gaps = 1/186 (0%)
Query: 119 RMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTE 178
R+ M + + +L QM G + ++ + AG+ ADA + D++ G E N
Sbjct: 264 RVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNAN 323
Query: 179 SMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEM 237
+L+ LCK + +E+A ++++E++++ + T+ + G+CK ++++ + + +M
Sbjct: 324 CYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDM 383
Query: 238 KGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKF 297
G P ++Y I+ + +++F + EL+++M+ + P++ Y +++ K +
Sbjct: 384 IKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEV 443
Query: 298 DEALQV 303
EA+++
Sbjct: 444 KEAVRL 449
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 122/239 (51%), Gaps = 2/239 (0%)
Query: 68 AIHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLR 127
I L P LI +L R D F WA+ + HS E MV IL +M+ +
Sbjct: 92 GIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVW 151
Query: 128 DLLDQMR-CEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDT 186
L+++MR +I +MRRF A AV + D++ GLE + LLD
Sbjct: 152 GLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDA 211
Query: 187 LCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCV 246
LCK V++A +++ ++++ PN F ++GWC+ ++ EA + +MK G P +
Sbjct: 212 LCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDI 271
Query: 247 ISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEK-FDEALQVI 304
+ ++ ++ Y + + Y+L+++M+ + PNV YT+++ AL + EK DEA++V
Sbjct: 272 VVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVF 330
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 99/179 (55%), Gaps = 2/179 (1%)
Query: 127 RDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDT 186
+++L QM+ G + ++ + AG+ ADA + +D++ G E N +L+
Sbjct: 256 KEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQA 315
Query: 187 LCK-EEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRP 244
LC+ E+ +++A ++++E++++ + T+ I G+CK +++ + + +M+ G P
Sbjct: 316 LCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMP 375
Query: 245 CVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
++Y I+ + ++ F + EL+++M+ + C P+++ Y +++ K + EA+++
Sbjct: 376 SQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRL 434
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 124/235 (52%), Gaps = 1/235 (0%)
Query: 72 SPNLINILLRRYKDDWKSALGLFKWA-SLHSNFQHSPESYDMMVDILGRMKVMDKLRDLL 130
+PNL+N +L+R + AL F + + H + H S+D+ +DI R+ + + L+
Sbjct: 55 TPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLI 114
Query: 131 DQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKE 190
+MR + T A V R+ AG+ AV++F ++ G ++ S N +LD LCK
Sbjct: 115 HRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKS 174
Query: 191 EFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYS 250
+ VE+A +++ L+ + + T+N+ ++GWC I+R +A ++EM G P + +Y+
Sbjct: 175 KRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYN 234
Query: 251 TIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
T+++ + +E EM+ +DC +VVTYT ++ A + A V +
Sbjct: 235 TMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFD 289
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 4/158 (2%)
Query: 135 CEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVE 194
CE ++T T V+ F AG+ A +FD++ G+ + + N ++ LCK++ VE
Sbjct: 261 CEIDVVTYTT---VVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVE 317
Query: 195 QARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTII 253
A ++ E+ ++ PN T+N+ I G +Q M+ GC P +Y+ +I
Sbjct: 318 NAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMI 377
Query: 254 QCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCAL 291
+ Y K L ++M + DC PN+ TY I++ +
Sbjct: 378 RYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 106/220 (48%), Gaps = 3/220 (1%)
Query: 88 KSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAK 147
+ A LF+ +L F +Y+++++ +K K ++L +M G L T
Sbjct: 178 EKAYELFR--ALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNT 235
Query: 148 VMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQH 206
+++ F AGQ A F +++ E + + ++ +++AR ++ E+ ++
Sbjct: 236 MLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG 295
Query: 207 IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVY 266
+ P+ T+N I CK VE A +EM G P V +Y+ +I+ + FS+
Sbjct: 296 VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGE 355
Query: 267 ELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
EL+ M+ + C PN TY +++ ++ + ++AL + E+
Sbjct: 356 ELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEK 395
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 151/288 (52%), Gaps = 20/288 (6%)
Query: 35 SLMRSVDILTSKVA---KGSSEEEIIR---------SLCNDQACDAIHLSPNLINILLRR 82
S + SV + +KV +G E + R L + IHLS +LI+ +L+R
Sbjct: 21 SFLHSVALSDAKVPVEEEGDDAETVFRMINGSNLQVELKESLSSSGIHLSKDLIDRVLKR 80
Query: 83 YK---DDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLL-DQMRCEGS 138
+ + L +++AS F HS S D M+ ILGR + D++ +LL + R + S
Sbjct: 81 VRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYILGRNRKFDQIWELLIETKRKDRS 140
Query: 139 IITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEK-NTESMNLLLDTLCKEEFVEQAR 197
+I+ T+ V+ R V F + L + +T N LL TLC+E+ + AR
Sbjct: 141 LISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDAR 200
Query: 198 QIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYC 257
+Y LK P+ TFNI + GW + EEA +EMKG G +P V++Y+++I YC
Sbjct: 201 NVYHSLKHQFQPDLQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYC 257
Query: 258 NEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
++ K Y+L+D+M+ ++ +P+V+TYT ++ L + D+A +V++
Sbjct: 258 KDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLK 305
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 137/254 (53%), Gaps = 11/254 (4%)
Query: 57 IRSLCNDQACDAIHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDI 116
+ +L N+ + + LSP LI +L++ + AL +FKWA F+H+ +Y+ +++
Sbjct: 81 VETLLNEAS---VKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIES 137
Query: 117 LGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKN 176
LG++K + L+D M+ + +++ T A + RR+ A + +A+ F ++ G +
Sbjct: 138 LGKIKQFKLIWSLVDDMKAK-KLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKME 196
Query: 177 TESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCK---IRRVEEAHW 232
+ N +LDTL K V A++++ ++ K+ P+ ++ I + GW + + RV+E +
Sbjct: 197 SSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVN- 255
Query: 233 TIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALA 292
+EMK G P V++Y II +C + + + +EM+ ++C P+ + ++ L
Sbjct: 256 --REMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLG 313
Query: 293 KAEKFDEALQVIER 306
+K ++AL+ ER
Sbjct: 314 SEKKLNDALEFFER 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 74/142 (52%), Gaps = 4/142 (2%)
Query: 160 DAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFI 218
DA+ F+ ++ G + N L+ C + +E A + E++ + + PNA T++I +
Sbjct: 320 DALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIIL 379
Query: 219 HGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCS 278
H +++R +EA+ Q M C P V +Y +++ +CN++ ++ DEM+ +
Sbjct: 380 HHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVL 436
Query: 279 PNVVTYTIIMCALAKAEKFDEA 300
P + ++ ++ AL K DEA
Sbjct: 437 PGMHMFSSLITALCHENKLDEA 458
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 96/202 (47%), Gaps = 4/202 (1%)
Query: 103 FQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAV 162
F+ +SY ++++ G+ + ++ ++ +M+ EG + ++ A ++ +A+
Sbjct: 228 FEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAI 287
Query: 163 RIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAP-NAHTFNIFIHGW 221
R F++++ + + L++ L E+ + A + + K P A T+N + +
Sbjct: 288 RFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAY 347
Query: 222 CKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNV 281
C +R+E+A+ T+ EM+ G P +Y I+ Q + YE+ Q C P V
Sbjct: 348 CWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVY---QTMSCEPTV 404
Query: 282 VTYTIIMCALAKAEKFDEALQV 303
TY I++ E+ D A+++
Sbjct: 405 STYEIMVRMFCNKERLDMAIKI 426
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 81/171 (47%), Gaps = 2/171 (1%)
Query: 102 NFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADA 161
N + SP + +++ LG K ++ + ++ + G + T ++ + + + DA
Sbjct: 297 NCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDA 356
Query: 162 VRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGW 221
+ D+++ G+ N + +++L L + + ++A ++Y + P T+ I + +
Sbjct: 357 YKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS--CEPTVSTYEIMVRMF 414
Query: 222 CKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEM 272
C R++ A EMKG G P + +S++I C+E + E +EM
Sbjct: 415 CNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEM 465
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 7/204 (3%)
Query: 70 HLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDL 129
H+ +LIN L K AL F+ S S F +Y+ +V + M+
Sbjct: 303 HIFCSLINGLGSEKK--LNDALEFFE-RSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKT 359
Query: 130 LDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCK 189
+D+MR +G T ++ + + +A ++ QT+ E + +++ C
Sbjct: 360 VDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVY---QTMSCEPTVSTYEIMVRMFCN 416
Query: 190 EEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVIS 248
+E ++ A +I+ E+K + + P H F+ I C +++EA EM G RP
Sbjct: 417 KERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHM 476
Query: 249 YSTIIQCYCNEQNFSKVYELLDEM 272
+S + Q +E KV +L+ +M
Sbjct: 477 FSRLKQTLLDEGRKDKVTDLVVKM 500
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 129/237 (54%), Gaps = 1/237 (0%)
Query: 69 IHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRD 128
+ LS +LI +L R++ K A F WA+ F H+ +Y+ M+ IL + + + +
Sbjct: 157 LDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVS 216
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
+L++M +G ++T+ T M+ F A + AV IF+ ++ + E++N LLD+L
Sbjct: 217 VLEEMGTKG-LLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLG 275
Query: 189 KEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVIS 248
+ + ++A+ ++ +LK+ PN T+ + ++GWC++R + EA +M +G +P +++
Sbjct: 276 RAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVA 335
Query: 249 YSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
++ +++ S +L M+++ PNV +YTI++ K + A++ +
Sbjct: 336 HNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFD 392
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 101/206 (49%), Gaps = 3/206 (1%)
Query: 88 KSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAK 147
K A+G+F+ + F+ E+ + ++D LGR K+ + + L D+++ E + T
Sbjct: 246 KKAVGIFELMKKY-KFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTV 303
Query: 148 VMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHI 207
++ + +A RI++D+ GL+ + + N++L+ L + A +++ +K
Sbjct: 304 LLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKG 363
Query: 208 A-PNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVY 266
PN ++ I I +CK +E A +M G +P Y+ +I + ++ VY
Sbjct: 364 PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVY 423
Query: 267 ELLDEMQAQDCSPNVVTYTIIMCALA 292
ELL EMQ + P+ TY ++ +A
Sbjct: 424 ELLKEMQEKGHPPDGKTYNALIKLMA 449
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 84/195 (43%), Gaps = 2/195 (1%)
Query: 112 MMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTL 171
M+ +L MK D ++ L M+ +G + + ++R F A+ FDD+
Sbjct: 339 MLEGLLRSMKKSDAIK-LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS 397
Query: 172 GLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHI-APNAHTFNIFIHGWCKIRRVEEA 230
GL+ + L+ ++ ++ ++ E+++ P+ T+N I + E
Sbjct: 398 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHG 457
Query: 231 HWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCA 290
+M P + +++ I++ Y +N+ + DEM + P+ +YT+++
Sbjct: 458 TRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRG 517
Query: 291 LAKAEKFDEALQVIE 305
L K EA + +E
Sbjct: 518 LISEGKSREACRYLE 532
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 128/237 (54%), Gaps = 1/237 (0%)
Query: 69 IHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRD 128
+ LS +LI +L R++ K A F WA+ F H +Y+ M+ IL + + + +
Sbjct: 156 LDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVS 215
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
+L++M +G ++T+ T M+ F A + AV IF+ ++ + E++N LLD+L
Sbjct: 216 VLEEMGTKG-LLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLG 274
Query: 189 KEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVIS 248
+ + ++A+ ++ +LK+ PN T+ + ++GWC++R + EA +M +G +P +++
Sbjct: 275 RAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVA 334
Query: 249 YSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
++ +++ S +L M+++ PNV +YTI++ K + A++ +
Sbjct: 335 HNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFD 391
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 101/206 (49%), Gaps = 3/206 (1%)
Query: 88 KSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAK 147
K A+G+F+ + F+ E+ + ++D LGR K+ + + L D+++ E + T
Sbjct: 245 KKAVGIFELMKKY-KFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTV 302
Query: 148 VMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHI 207
++ + +A RI++D+ GL+ + + N++L+ L + A +++ +K
Sbjct: 303 LLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKG 362
Query: 208 A-PNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVY 266
PN ++ I I +CK +E A +M G +P Y+ +I + ++ VY
Sbjct: 363 PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVY 422
Query: 267 ELLDEMQAQDCSPNVVTYTIIMCALA 292
ELL EMQ + P+ TY ++ +A
Sbjct: 423 ELLKEMQEKGHPPDGKTYNALIKLMA 448
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 84/195 (43%), Gaps = 2/195 (1%)
Query: 112 MMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTL 171
M+ +L MK D ++ L M+ +G + + ++R F A+ FDD+
Sbjct: 338 MLEGLLRSMKKSDAIK-LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS 396
Query: 172 GLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHI-APNAHTFNIFIHGWCKIRRVEEA 230
GL+ + L+ ++ ++ ++ E+++ P+ T+N I + E
Sbjct: 397 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHG 456
Query: 231 HWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCA 290
+M P + +++ I++ Y +N+ + DEM + P+ +YT+++
Sbjct: 457 TRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRG 516
Query: 291 LAKAEKFDEALQVIE 305
L K EA + +E
Sbjct: 517 LISEGKSREACRYLE 531
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 124/249 (49%), Gaps = 16/249 (6%)
Query: 56 IIRSLCNDQACDAIHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVD 115
++RSL Q C + R +DD + AL F WA ++H P Y M++
Sbjct: 168 LLRSLKPSQVCAVL------------RSQDDERVALKFFYWADRQWRYRHDPMVYYSMLE 215
Query: 116 ILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEK 175
+L + K+ R +L M+ G T ++VM + AGQ DA+++ +Q G+E
Sbjct: 216 VLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEP 275
Query: 176 NTESMNLLLDTLCKEEFVEQARQIYLELKQ--HIAPNAHTFNIFIHGWCKIRRVEEAHWT 233
N N +D + +E+A + +LE Q I PN T+N I G+C + RVEEA
Sbjct: 276 NLLICNTTIDVFVRANRLEKALR-FLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIEL 334
Query: 234 IQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEM-QAQDCSPNVVTYTIIMCALA 292
+++M GC P +SY TI+ C E+ +V +L+ +M + P+ VTY ++ L
Sbjct: 335 LEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLT 394
Query: 293 KAEKFDEAL 301
K + DEAL
Sbjct: 395 KHDHADEAL 403
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 144/306 (47%), Gaps = 18/306 (5%)
Query: 14 FSRLAIASCGARGFRHQEQCQSLMRSVDILTSKVAKGSSEEEIIRSLCNDQAC------D 67
FSR+ ++ A R + +LM+ + + + ++ + +R+ ++A
Sbjct: 245 FSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQ 304
Query: 68 AIHLSPNLI--NILLRRYKDDWKSALGLFKWASLHSNF-QHSPESYDMMVDILGRMKVMD 124
+ + PN++ N ++R Y D + + +HS SY ++ L + K +
Sbjct: 305 VVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIV 364
Query: 125 KLRDLLDQMRCEGSII----TLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESM 180
++RDL+ +M E ++ T NT+ ++ + A + A+ D Q G +
Sbjct: 365 EVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADE---ALWFLKDAQEKGFRIDKLGY 421
Query: 181 NLLLDTLCKEEFVEQARQIYLEL--KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMK 238
+ ++ LCKE + +A+ + E+ K H P+ T+ ++G+C++ V++A +Q M
Sbjct: 422 SAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMH 481
Query: 239 GYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFD 298
+G +P +SY+ ++ C + E+++ + SPN +TY++IM L + K
Sbjct: 482 THGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLS 541
Query: 299 EALQVI 304
EA V+
Sbjct: 542 EACDVV 547
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 118/270 (43%), Gaps = 40/270 (14%)
Query: 74 NLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQM 133
LI++L + D AL K A F+ Y +V L + M + +DL+++M
Sbjct: 388 TLIHMLTKH--DHADEALWFLKDAQ-EKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM 444
Query: 134 RCEGSIIT-LNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEF 192
+G + T V+ F G+ A ++ + T G + NT S LL+ +C+
Sbjct: 445 LSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGK 504
Query: 193 VEQARQIYLELKQHI-APNAHTFNIFIHGWCKIRRVEEAHWTIQEM--KGY--------- 240
+AR++ ++H +PN+ T+++ +HG + ++ EA ++EM KG+
Sbjct: 505 SLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINL 564
Query: 241 ------------------------GCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQD 276
GC V++++T+I +C +LD+M +
Sbjct: 565 LLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLIN 624
Query: 277 CSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+V TYT ++ L K + EA +++++
Sbjct: 625 KHADVFTYTTLVDTLGKKGRIAEATELMKK 654
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 79/168 (47%), Gaps = 4/168 (2%)
Query: 140 ITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQI 199
IT + I +RR G+ ++A + ++ G +NLLL +LC++ +AR+
Sbjct: 525 ITYSVIMHGLRR---EGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKF 581
Query: 200 YLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCN 258
E L + A N F IHG+C+ ++ A + +M V +Y+T++
Sbjct: 582 MEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGK 641
Query: 259 EQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+ ++ EL+ +M + P VTY ++ + K D+ + ++E+
Sbjct: 642 KGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEK 689
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 128/237 (54%), Gaps = 1/237 (0%)
Query: 69 IHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRD 128
+ LS +LI +L R++ K A F WA+ F H +Y+ M+ IL + + + +
Sbjct: 157 LDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVS 216
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
+L++M +G ++T+ T M+ F A + AV IF+ ++ + E++N LLD+L
Sbjct: 217 VLEEMGTKG-LLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLG 275
Query: 189 KEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVIS 248
+ + ++A+ ++ +LK+ PN T+ + ++GWC++R + EA +M G +P +++
Sbjct: 276 RAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVA 335
Query: 249 YSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
++ +++ + S +L M+++ PNV +YTI++ K + A++ +
Sbjct: 336 HNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFD 392
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 107/220 (48%), Gaps = 3/220 (1%)
Query: 88 KSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAK 147
K A+G+F+ + F+ E+ + ++D LGR K+ + + L D+++ E + T
Sbjct: 246 KKAVGIFELMKKY-KFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTV 303
Query: 148 VMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHI 207
++ + +A RI++D+ GL+ + + N++L+ L + A +++ +K
Sbjct: 304 LLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKG 363
Query: 208 A-PNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVY 266
PN ++ I I +CK +E A +M G +P Y+ +I + ++ VY
Sbjct: 364 PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVY 423
Query: 267 ELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
ELL EMQ + P+ TY ++ +A + + A ++ +
Sbjct: 424 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNK 463
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 128/265 (48%), Gaps = 8/265 (3%)
Query: 45 SKVAK--GSSEEEIIRSLCNDQACDAIHLSPNLINILLRRYKDDWKSALGLFKWASLHSN 102
SK+ K GS +E+ L + CD + S L+ +L R ++DW++A F WA
Sbjct: 101 SKLVKDCGSDRKELRNKL---EECD-VKPSNELVVEILSRVRNDWETAFTFFVWAGKQQG 156
Query: 103 FQHSPESYDMMVDILGRMKVMDKLRDLLDQMR-CEGSIITLNTIAKVMRRFVGAGQWADA 161
+ S Y M+ ILG+M+ D L+D+MR S++ T+ ++R++ A
Sbjct: 157 YVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKA 216
Query: 162 VRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGW 221
+ F + LE + LL LC+ + V A + K +A +FNI ++GW
Sbjct: 217 INTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGW 276
Query: 222 CK-IRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPN 280
C I EA EM G + V+SYS++I CY + +KV +L D M+ + P+
Sbjct: 277 CNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPD 336
Query: 281 VVTYTIIMCALAKAEKFDEALQVIE 305
Y ++ ALAKA EA +++
Sbjct: 337 RKVYNAVVHALAKASFVSEARNLMK 361
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 96/199 (48%), Gaps = 5/199 (2%)
Query: 104 QHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVR 163
+H SY M+ + ++K+ L D+M+ E V+ A ++A
Sbjct: 299 KHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARN 358
Query: 164 IFDDLQT-LGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGW 221
+ ++ G+E N + N L+ LCK E+A+Q++ E L++ + P T++ F+
Sbjct: 359 LMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR-- 416
Query: 222 CKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNV 281
+R EE + +M+ GC P V +Y +I+ C ++F V L DEM+ + P++
Sbjct: 417 -ILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDL 475
Query: 282 VTYTIIMCALAKAEKFDEA 300
+Y +++ L K +EA
Sbjct: 476 SSYIVMIHGLFLNGKIEEA 494
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
Query: 155 AGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY--LELKQHIAPNAH 212
G +++FD ++ +E + + N ++ L K FV +AR + +E ++ I PN
Sbjct: 315 GGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVV 374
Query: 213 TFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEM 272
T+N I CK R+ EEA EM G P + +Y ++ + +V+ELL +M
Sbjct: 375 TYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL---RTGEEVFELLAKM 431
Query: 273 QAQDCSPNVVTYTIIMCALAKAEKFDEAL 301
+ C P V TY +++ L + FD L
Sbjct: 432 RKMGCEPTVETYIMLIRKLCRWRDFDNVL 460
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 71/148 (47%), Gaps = 2/148 (1%)
Query: 156 GQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTF 214
G +A R++ ++ +G++ + S + ++ K + + +++ +K+ I P+ +
Sbjct: 281 GSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVY 340
Query: 215 NIFIHGWCKIRRVEEAHWTIQEMKG-YGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQ 273
N +H K V EA ++ M+ G P V++Y+++I+ C + + ++ DEM
Sbjct: 341 NAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEML 400
Query: 274 AQDCSPNVVTYTIIMCALAKAEKFDEAL 301
+ P + TY M L E+ E L
Sbjct: 401 EKGLFPTIRTYHAFMRILRTGEEVFELL 428
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+ ++ L + + ++ + + D+M +G T+ T MR + G+ + + +
Sbjct: 375 TYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR-ILRTGE--EVFELLAKM 431
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRV 227
+ +G E E+ +L+ LC+ + ++ E+K+ + P+ ++ + IHG ++
Sbjct: 432 RKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKI 491
Query: 228 EEAHWTIQEMKGYGCRP 244
EEA+ +EMK G RP
Sbjct: 492 EEAYGYYKEMKDKGMRP 508
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 121/239 (50%), Gaps = 6/239 (2%)
Query: 71 LSPNLINILLR-----RYKDDWKSALGLFKWASLHSNFQH-SPESYDMMVDILGRMKVMD 124
+SP+++ ++ R+ +L F WA+ ++ H SP Y+ M+D+ G+++ D
Sbjct: 109 VSPSVVRCVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFD 168
Query: 125 KLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLL 184
L+D M+ I++ T ++RR+V AG ++AV F+ ++ G + + ++++
Sbjct: 169 LAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVI 228
Query: 185 DTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRP 244
L ++ +A+ + LK P+ + + GWC+ + EA +EMK G P
Sbjct: 229 SNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEP 288
Query: 245 CVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
V +YS +I C S+ +++ +M C+PN +T+ +M KA + ++ LQV
Sbjct: 289 NVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQV 347
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 97/195 (49%), Gaps = 6/195 (3%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQM--RCEGSIITLNTIAKVMRRFVGAGQWADAVRIFD 166
++ +++ L R + + + D + R E +I + +R + AG+ ++A ++F
Sbjct: 223 AFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNL---VRGWCRAGEISEAEKVFK 279
Query: 167 DLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIR 225
+++ G+E N + ++++D LC+ + +A ++ + L APNA TFN + K
Sbjct: 280 EMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAG 339
Query: 226 RVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYT 285
R E+ +MK GC P I+Y+ +I+ +C ++N ++L+ M + C N T+
Sbjct: 340 RTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFN 399
Query: 286 IIMCALAKAEKFDEA 300
I + K + A
Sbjct: 400 TIFRYIEKKRDVNGA 414
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 94/185 (50%), Gaps = 9/185 (4%)
Query: 109 SYDMMVDILGR----MKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRI 164
+Y +++D L R + D D+LD C + IT N + MR V AG+ +++
Sbjct: 292 TYSIVIDALCRCGQISRAHDVFADMLDS-GCAPNAITFNNL---MRVHVKAGRTEKVLQV 347
Query: 165 FDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGWCK 223
++ ++ LG E +T + N L++ C++E +E A ++ +K+ NA TFN K
Sbjct: 348 YNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEK 407
Query: 224 IRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVT 283
R V AH +M C P ++Y+ +++ + ++ V ++ EM ++ PNV T
Sbjct: 408 KRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNT 467
Query: 284 YTIIM 288
Y +++
Sbjct: 468 YRLLV 472
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 141/298 (47%), Gaps = 18/298 (6%)
Query: 6 SRKCCCSLFSRLAIASCGARGFRHQEQCQSLMRSVDILTSKVAKGSSEEEIIRSLCNDQA 65
SR CC S S AR + EQ + + V SKV S + L D A
Sbjct: 46 SRFCCKSFLS--------ARLYSSSEQVRDVA-DVAKNISKVLMSSPQ------LVLDSA 90
Query: 66 CD--AIHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVM 123
D + +S ++ +L R+++ F+W+ +++HS +Y MM++ +++
Sbjct: 91 LDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQY 150
Query: 124 DKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLL 183
+ DL++ MR + ++ + T VMR++ A + +A+ F+ ++ L N + N L
Sbjct: 151 KLMWDLINAMR-KKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGL 209
Query: 184 LDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCR 243
L LCK + V +A++++ ++ P++ T++I + GW K + +A +EM GC
Sbjct: 210 LSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCH 269
Query: 244 PCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEAL 301
P +++YS ++ C + ++ M C P Y++++ + +EA+
Sbjct: 270 PDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAV 327
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 1/147 (0%)
Query: 161 AVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHI-APNAHTFNIFIH 219
A +F ++ G + + ++++D LCK V++A I + I P +++ +H
Sbjct: 256 AREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVH 315
Query: 220 GWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSP 279
+ R+EEA T EM+ G + V ++++I +C VY +L EM+++ +P
Sbjct: 316 TYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTP 375
Query: 280 NVVTYTIIMCALAKAEKFDEALQVIER 306
N + II+ L + + DEA V +
Sbjct: 376 NSKSCNIILRHLIERGEKDEAFDVFRK 402
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 90/189 (47%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
Y ++V G +++ D +M G + ++ F A + + R+ +++
Sbjct: 310 YSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMK 369
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEE 229
+ G+ N++S N++L L + ++A ++ ++ + P+A T+ + I +C+ + +E
Sbjct: 370 SKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMET 429
Query: 230 AHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMC 289
A + M+ G P + ++S +I C E+ K LL+EM P+ VT+ +
Sbjct: 430 ADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQ 489
Query: 290 ALAKAEKFD 298
L K E+ D
Sbjct: 490 LLIKEERED 498
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 124/270 (45%), Gaps = 17/270 (6%)
Query: 42 ILTSKVAKGSSEEEIIRSLCNDQACDAIHLSPNLI--NILLRRY--KDDWKSALGLFKWA 97
I+ K A+ +E I + + L PNL+ N LL + + A +F+
Sbjct: 173 IVMRKYARAQKVDEAIYAF---NVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFE-- 227
Query: 98 SLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQM---RCEGSIITLNTIAKVMRRFVG 154
++ F ++Y ++++ G+ + K R++ +M C I+T + + ++
Sbjct: 228 NMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDIL---CK 284
Query: 155 AGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHT 213
AG+ +A+ I + + T ++L+ T E +E+A +LE+++ + +
Sbjct: 285 AGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAV 344
Query: 214 FNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQ 273
FN I +CK R++ + ++EMK G P S + I++ + +++ +M
Sbjct: 345 FNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM- 403
Query: 274 AQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
+ C P+ TYT+++ + ++ + A +V
Sbjct: 404 IKVCEPDADTYTMVIKMFCEKKEMETADKV 433
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 132/249 (53%), Gaps = 12/249 (4%)
Query: 68 AIHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDK-- 125
++ L+ ++ +L+R + + K+A F WA ++ H P +Y+ M+DIL K +K
Sbjct: 120 SVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQF 179
Query: 126 --LRDLLDQM-RCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTE--SM 180
+ D+LD M R +++ ++ + +++R++ ++ V+ F + + ++ E +
Sbjct: 180 RIVIDMLDYMKRNNKTVVLVDVLLEILRKY--CERYLTHVQKFAKRKRIRVKTQPEINAF 237
Query: 181 NLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGY 240
N+LLD LCK V++ + ++ + P+A+TFN+ GWC++R ++A ++EM
Sbjct: 238 NMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEA 297
Query: 241 GCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQD---CSPNVVTYTIIMCALAKAEKF 297
G +P +Y I +C + +L D M + +P T+ +++ ALAK +K
Sbjct: 298 GHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKA 357
Query: 298 DEALQVIER 306
+E ++I R
Sbjct: 358 EECFELIGR 366
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 125/277 (45%), Gaps = 16/277 (5%)
Query: 40 VDILTSKVAKGSSEEEIIRSLCNDQACDAIHLSPNLINILLRRYKDDWKSALGLF-KWAS 98
+DIL+S K +I L + + + +++ +LR+Y + + + + F K
Sbjct: 166 IDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYCERYLTHVQKFAKRKR 225
Query: 99 LHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMR--CEGSIITLNTIAKVMRRFVGAG 156
+ Q +++M++D L + ++ + LL +MR + T N + F G
Sbjct: 226 IRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVL------FFGWC 279
Query: 157 QWAD---AVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY----LELKQHIAP 209
+ D A+++ +++ G + + +DT C+ V++A ++ + AP
Sbjct: 280 RVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAP 339
Query: 210 NAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELL 269
A TF + I K + EE I M GC P V +Y +I+ C + + Y+ L
Sbjct: 340 TAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFL 399
Query: 270 DEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
DEM + P++VTY + L + K DEAL++ R
Sbjct: 400 DEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGR 436
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 91/207 (43%), Gaps = 6/207 (2%)
Query: 105 HSPE--SYDMMVDILGRMKVMDKLRDLLDQMRCEGSII---TLNTIAKVMRRFVGAGQWA 159
H PE +Y +D + ++D+ DL D M +GS + T T A ++ +
Sbjct: 299 HKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAE 358
Query: 160 DAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFI 218
+ + + + G + + +++ +C E V++A + E+ + P+ T+N F+
Sbjct: 359 ECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFL 418
Query: 219 HGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCS 278
C+ R+ +EA M C P V +Y+ +I + + + EM +DC
Sbjct: 419 RVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCV 478
Query: 279 PNVVTYTIIMCALAKAEKFDEALQVIE 305
+V TY ++ L + EA ++E
Sbjct: 479 QDVETYCAMINGLFDCHRAKEACFLLE 505
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 86/203 (42%), Gaps = 6/203 (2%)
Query: 107 PESYDMMVDILGRMKVMD--KLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRI 164
P++ V G +V D K LL++M G T + F AG +A +
Sbjct: 266 PDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADL 325
Query: 165 FDDLQTLGLE---KNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHG 220
FD + T G ++ L++ L K + E+ ++ + P+ T+ I G
Sbjct: 326 FDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEG 385
Query: 221 WCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPN 280
C +V+EA+ + EM G P +++Y+ ++ C + + +L M C+P+
Sbjct: 386 MCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPS 445
Query: 281 VVTYTIIMCALAKAEKFDEALQV 303
V TY +++ + + D A
Sbjct: 446 VQTYNMLISMFFEMDDPDGAFNT 468
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 115/239 (48%)
Query: 68 AIHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLR 127
I LS +++ +L R ++ + F WA SY +++ LGR K+ +
Sbjct: 112 GIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMM 171
Query: 128 DLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTL 187
D+L M CEG L + M FV A+ +F++ ++ G++ +TES N LL L
Sbjct: 172 DVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCL 231
Query: 188 CKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
C+ V A+ ++ K +I ++ ++NI I GW K+ VEE ++EM G P +
Sbjct: 232 CERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCL 291
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
SYS +I+ + E+ D ++ + P+ Y ++C A FDE+++ R
Sbjct: 292 SYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRR 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 87/208 (41%), Gaps = 1/208 (0%)
Query: 99 LHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQW 158
+ S F SY +++ LGR ++ ++ D ++ +G++ N ++ F+ A +
Sbjct: 282 VESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDF 341
Query: 159 ADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIF 217
+++R + + E N E+ + L+ L K V A +I+ E L + + P F
Sbjct: 342 DESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSF 401
Query: 218 IHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDC 277
+ C A Q+ + GCR +Y +++ + + DEMQ
Sbjct: 402 LKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGY 461
Query: 278 SPNVVTYTIIMCALAKAEKFDEALQVIE 305
+V Y I+ L + A+ V+E
Sbjct: 462 PSDVEVYEYIVDGLCIIGHLENAVLVME 489
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 135/258 (52%), Gaps = 15/258 (5%)
Query: 63 DQACDAIHLSPN--LINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRM 120
+ A D + P+ L++ L R +FKWA + F SP +D +V+ L +
Sbjct: 89 ESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVVNSLCKA 148
Query: 121 KVMDKLRDLL-DQMRC-EGS-IITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGL--EK 175
+ + L+ D++R EGS +++ +T ++RR+ AG A+R F+ ++ +
Sbjct: 149 REFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKS 208
Query: 176 NTES--MNLLLDTLCKEEFVEQARQIYLE-----LKQHIAPNAHTFNIFIHGWCKIRRVE 228
TE + +LLD LCKE V +A +YLE + + P+ FNI ++GW + R+++
Sbjct: 209 ATELRLLEVLLDALCKEGHVREA-SMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLK 267
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
+A +EMK +P V++Y T+I+ YC + E+L+EM+ + N + + I+
Sbjct: 268 QAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPII 327
Query: 289 CALAKAEKFDEALQVIER 306
L +A + EAL ++ER
Sbjct: 328 DGLGEAGRLSEALGMMER 345
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/230 (19%), Positives = 100/230 (43%), Gaps = 2/230 (0%)
Query: 75 LINILLRRYKDDWKSALGLFKWASLHS-NFQHSPESYDMMVDILGRMKVMDKLRDLLDQM 133
+ NILL + K W + + N + + +Y +++ RM+ + ++L++M
Sbjct: 252 IFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEM 311
Query: 134 RCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFV 193
+ I ++ AG+ ++A+ + + + N L+ CK +
Sbjct: 312 KMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDL 371
Query: 194 EQARQIY-LELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTI 252
A +I + + + + P T+N F + K + EE ++ G P ++Y I
Sbjct: 372 PGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLI 431
Query: 253 IQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQ 302
++ C + S ++ EM+ + P+++T T+++ L + E +EA +
Sbjct: 432 LKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFE 481
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 116/201 (57%), Gaps = 7/201 (3%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMR---CEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
+Y+++V+ + + +D+ L+ M C+ ++IT N I +R G+W DA ++
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNII---LRSMCSTGRWMDAEKLL 332
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKI 224
D+ G + + N+L++ LC++ + +A I ++ QH PN+ ++N +HG+CK
Sbjct: 333 ADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 392
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
++++ A ++ M GC P +++Y+T++ C + E+L+++ ++ CSP ++TY
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 452
Query: 285 TIIMCALAKAEKFDEALQVIE 305
++ LAKA K +A+++++
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLD 473
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 110/202 (54%), Gaps = 7/202 (3%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMR---CEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
+Y ++++ R + LLD+MR C ++T N + + + G+ +A++
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK---EGRLDEAIKFL 297
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKI 224
+D+ + G + N + N++L ++C A ++ + L++ +P+ TFNI I+ C+
Sbjct: 298 NDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRK 357
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
+ A +++M +GC+P +SY+ ++ +C E+ + E L+ M ++ C P++VTY
Sbjct: 358 GLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTY 417
Query: 285 TIIMCALAKAEKFDEALQVIER 306
++ AL K K ++A++++ +
Sbjct: 418 NTMLTALCKDGKVEDAVEILNQ 439
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 105/199 (52%), Gaps = 4/199 (2%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y++M+ + ++ +LD+M ++T NTI +R +G+ A+ + D +
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTI---LRSLCDSGKLKQAMEVLDRM 230
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRV 227
+ + +L++ C++ V A ++ E++ + P+ T+N+ ++G CK R+
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
+EA + +M GC+P VI+++ I++ C+ + +LL +M + SP+VVT+ I+
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 288 MCALAKAEKFDEALQVIER 306
+ L + A+ ++E+
Sbjct: 351 INFLCRKGLLGRAIDILEK 369
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 107/218 (49%), Gaps = 2/218 (0%)
Query: 87 WKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIA 146
+ ++ G ++S++S+F + + + R +++ L+ M G++ +
Sbjct: 82 YSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCT 141
Query: 147 KVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH 206
++R F G+ A +I + L+ G + + N+++ CK + A + +
Sbjct: 142 TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS-- 199
Query: 207 IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVY 266
++P+ T+N + C ++++A + M C P VI+Y+ +I+ C +
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 267 ELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+LLDEM+ + C+P+VVTY +++ + K + DEA++ +
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 93/188 (49%), Gaps = 13/188 (6%)
Query: 117 LGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKN 176
LG+ + K+ ++L+ +IT N + + + AG+ +A+ + D + + +
Sbjct: 150 LGKTRKAAKILEILEGSGAVPDVITYNVM---ISGYCKAGEINNALSVLDRMS---VSPD 203
Query: 177 TESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQ 235
+ N +L +LC ++QA ++ L++ P+ T+ I I C+ V A +
Sbjct: 204 VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLD 263
Query: 236 EMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII---MCALA 292
EM+ GC P V++Y+ ++ C E + + L++M + C PNV+T+ II MC+
Sbjct: 264 EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG 323
Query: 293 K---AEKF 297
+ AEK
Sbjct: 324 RWMDAEKL 331
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 112/234 (47%), Gaps = 10/234 (4%)
Query: 75 LINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMR 134
LIN L R K A+ + + H Q + SY+ ++ + K MD+ + L++M
Sbjct: 350 LINFLCR--KGLLGRAIDILEKMPQHG-CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Query: 135 CEG---SIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEE 191
G I+T NT+ + + G+ DAV I + L + G + N ++D L K
Sbjct: 407 SRGCYPDIVTYNTMLTALCK---DGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463
Query: 192 FVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYS 250
+A ++ E++ + + P+ T++ + G + +V+EA E + G RP ++++
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFN 523
Query: 251 TIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+I+ C + + + L M + C PN +YTI++ LA EAL+++
Sbjct: 524 SIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELL 577
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 87/165 (52%), Gaps = 1/165 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+ M+ L + ++ ++L+Q+ +G L T V+ AG+ A+++ D++
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRV 227
+ L+ +T + + L+ L +E V++A + + E ++ I PNA TFN + G CK R+
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQT 535
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEM 272
+ A + M GC+P SY+ +I+ E + ELL+E+
Sbjct: 536 DRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 78/158 (49%), Gaps = 4/158 (2%)
Query: 149 MRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIA 208
+R+ V G+ + + +++ G + L+ C+ +A +I L+ A
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 209 -PNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYE 267
P+ T+N+ I G+CK + A + M P V++Y+TI++ C+ + E
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 268 LLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+LD M +DC P+V+TYTI++ A + A+++++
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLD 263
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 209 PNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYEL 268
P+ I G+C++ + +A ++ ++G G P VI+Y+ +I YC + +
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 269 LDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
LD M SP+VVTY I+ +L + K +A++V++R
Sbjct: 195 LDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 117/222 (52%), Gaps = 8/222 (3%)
Query: 90 ALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQM--RCEGSI-ITLNTIA 146
L F W S + F H +S+ +M++ LGR + ++ R+ L + R G + +
Sbjct: 84 GLRFFDWVS-NKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFN 142
Query: 147 KVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ- 205
++R + AG + ++V++F ++ +G+ + + N LL L K A ++ E+++
Sbjct: 143 SLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRT 202
Query: 206 -HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSK 264
+ P+++TFN I+G+CK V+EA ++M+ Y C P V++Y+TII C
Sbjct: 203 YGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKI 262
Query: 265 VYELLDEM--QAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+ +L M +A D PNVV+YT ++ ++ DEA+ V
Sbjct: 263 AHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVF 304
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIA--KVMRRFVGAGQWADAVRIFD 166
+Y+ ++D L R + ++L M + + + N ++ ++R + + +AV +F
Sbjct: 246 TYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFH 305
Query: 167 DLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYL---ELKQHIAPNAHTFNIFIHGWCK 223
D+ + GL+ N + N L+ L + ++ + I + + AP+A TFNI I C
Sbjct: 306 DMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCD 365
Query: 224 IRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDE-------MQAQD 276
++ A QEM P SYS +I+ C F + L +E + +
Sbjct: 366 AGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDE 425
Query: 277 CSPNVVTYTII---MCALAKAEKFDEAL-QVIER 306
C P Y + +CA K ++ ++ Q+++R
Sbjct: 426 CKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKR 459
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 109/242 (45%), Gaps = 20/242 (8%)
Query: 68 AIHLSPNLIN--ILLRRY--KDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVM 123
A + PN+++ L+R Y K + A+ +F L + + +Y+ ++ L
Sbjct: 274 ATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFH-DMLSRGLKPNAVTYNTLIKGLSEAHRY 332
Query: 124 DKLRDLLDQMRCEGSIITLN----TIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTES 179
D+++D+L + + T T +++ AG A+++F ++ + L ++ S
Sbjct: 333 DEIKDIL--IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSAS 390
Query: 180 MNLLLDTLCKEEFVEQARQIYLEL--------KQHIAPNAHTFNIFIHGWCKIRRVEEAH 231
++L+ TLC ++A ++ EL K P A +N C + ++A
Sbjct: 391 YSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAE 450
Query: 232 WTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCAL 291
+++ G + SY T+I +C E F YELL M ++ P++ TY +++ L
Sbjct: 451 KVFRQLMKRGVQDPP-SYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGL 509
Query: 292 AK 293
K
Sbjct: 510 LK 511
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 124/272 (45%), Gaps = 37/272 (13%)
Query: 71 LSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLL 130
+S NL+ +L+R K+ A F WA +F HS ESY ++V+ILG K L D L
Sbjct: 66 VSSNLVEQVLKRCKNLGFPAHRFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFL 125
Query: 131 DQMRCEGSI-ITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCK 189
+ R I+ V R + A ++A R F+ + G++ + ++ LL +LC
Sbjct: 126 IEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCD 185
Query: 190 EEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIR----------------------- 225
++ V A++ + + K I P+A T++I + GW +IR
Sbjct: 186 KKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLA 245
Query: 226 ------------RVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQ 273
V+ + QEM G +P S++ I YC+ + Y++LD M+
Sbjct: 246 YNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMK 305
Query: 274 AQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
D PNV T+ I+ L K EK D+A +++
Sbjct: 306 RYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLD 337
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 97/201 (48%), Gaps = 1/201 (0%)
Query: 106 SPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
S ++Y ++V R++ R + D+M ++ L ++ +G ++F
Sbjct: 207 SAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMF 266
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKI 224
++ LGL+ + S + + C V A ++ +K++ + PN +TFN I CK
Sbjct: 267 QEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKN 326
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
+V++A+ + EM G P +Y++I+ +C+ ++ +LL M C P+ TY
Sbjct: 327 EKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTY 386
Query: 285 TIIMCALAKAEKFDEALQVIE 305
+++ L + +FD A ++ E
Sbjct: 387 NMVLKLLIRIGRFDRATEIWE 407
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 88/180 (48%), Gaps = 1/180 (0%)
Query: 111 DMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQT 170
D ++ L K ++ ++ + + G + + T + ++R + + A ++FD++
Sbjct: 177 DQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLE 236
Query: 171 LGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEE 229
+ + N LLD LCK V+ +++ E+ + P+A++F IFIH +C V
Sbjct: 237 RNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHS 296
Query: 230 AHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMC 289
A+ + MK Y P V +++ II+ C + Y LLDEM + +P+ TY IM
Sbjct: 297 AYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMA 356
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 110/221 (49%), Gaps = 1/221 (0%)
Query: 85 DDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNT 144
D++ +ALG F W F+H +Y MV LGR K ++ LLD+M +G T
Sbjct: 337 DNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVT 396
Query: 145 IAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK 204
+++ + A +A+ +F+ +Q G E + + L+D K F++ A +Y ++
Sbjct: 397 YNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ 456
Query: 205 Q-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFS 263
+ ++P+ T+++ I+ K + AH EM G GC P +++++ +I + +N+
Sbjct: 457 EAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYE 516
Query: 264 KVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+L +MQ P+ VTY+I+M L +EA V
Sbjct: 517 TALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVF 557
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 96/197 (48%), Gaps = 4/197 (2%)
Query: 106 SPES--YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVR 163
SP++ Y ++++ LG+ + L +M +G L T ++ A + A++
Sbjct: 461 SPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALK 520
Query: 164 IFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWC 222
++ D+Q G + + + +++++ L F+E+A ++ E+ +++ P+ + + + W
Sbjct: 521 LYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWG 580
Query: 223 KIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVV 282
K V++A Q M G RP V + ++++ + S+ Y LL M A P++
Sbjct: 581 KAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQ 640
Query: 283 TYTIIM-CALAKAEKFD 298
TYT+++ C FD
Sbjct: 641 TYTLLLSCCTDARSNFD 657
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 79/188 (42%), Gaps = 11/188 (5%)
Query: 120 MKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTES 179
MKV + Q G ++ ++ ++RRF +W A + L G +
Sbjct: 277 MKVTPRTAPTPRQHCNPGYVV--ENVSSILRRF----KWGHAAE--EALHNFGFRMDAYQ 328
Query: 180 MNLLLDTLCKEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMK 238
N +L + + + Y L+ + + HT+ + + ++ E + + EM
Sbjct: 329 ANQVLKQM--DNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMV 386
Query: 239 GYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFD 298
GC+P ++Y+ +I Y + + ++MQ C P+ VTY ++ AKA D
Sbjct: 387 RDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLD 446
Query: 299 EALQVIER 306
A+ + +R
Sbjct: 447 IAMDMYQR 454
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 123/285 (43%), Gaps = 51/285 (17%)
Query: 69 IHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDIL--GRM------ 120
+ L+P + +L K+D K A FKW+ + F+HS ESY ++ IL RM
Sbjct: 104 LTLAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANS 163
Query: 121 -----------------------------KVMDKLRDLL-------DQMRCEGSIITLNT 144
V D L +L + ++C +
Sbjct: 164 VLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRV 223
Query: 145 IAK------VMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQ 198
K ++ RF G+ D R F D+ G + N+++D +CKE VE AR
Sbjct: 224 FPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARG 283
Query: 199 IYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYC 257
++ E+K + + P+ T+N I G+ K+ R+++ +EMK C P VI+Y+ +I C+C
Sbjct: 284 LFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFC 343
Query: 258 NEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQ 302
E EM+ PNVV+Y+ ++ A K +A++
Sbjct: 344 KFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK 388
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 130/287 (45%), Gaps = 4/287 (1%)
Query: 23 GARGFRHQEQCQSLMRSVDILTSKVAKGSSEEEIIRSLCNDQACDAIHLSPNLI--NILL 80
ARG + + + L+ S + + ++C + + P++I N L+
Sbjct: 280 AARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALI 339
Query: 81 RRYKDDWKSALGLFKWASLHSN-FQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSI 139
+ K +GL + + N + + SY +VD + +M + MR G +
Sbjct: 340 NCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLV 399
Query: 140 ITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQI 199
T ++ G +DA R+ +++ +G+E N + L+D LC E +++A ++
Sbjct: 400 PNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEEL 459
Query: 200 YLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCN 258
+ ++ + PN ++N IHG+ K + ++ A + E+KG G +P ++ Y T I C+
Sbjct: 460 FGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCS 519
Query: 259 EQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+ +++EM+ N + YT +M A K+ E L +++
Sbjct: 520 LEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLD 566
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 99/199 (49%), Gaps = 1/199 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y++M+D + + ++ R L ++M+ G + T ++ F G+ D V F+++
Sbjct: 264 TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 323
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRV 227
+ + E + + N L++ CK + + Y E+K + + PN +++ + +CK +
Sbjct: 324 KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMM 383
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
++A +M+ G P +Y+++I C N S + L +EM NVVTYT +
Sbjct: 384 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 443
Query: 288 MCALAKAEKFDEALQVIER 306
+ L AE+ EA ++ +
Sbjct: 444 IDGLCDAERMKEAEELFGK 462
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 72/160 (45%), Gaps = 2/160 (1%)
Query: 148 VMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHI 207
+M + +G + + + D+++ L +E + +L+D LCK + V +A + +
Sbjct: 548 LMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF 607
Query: 208 A--PNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKV 265
NA F I G CK +VE A ++M G P +Y++++ + N +
Sbjct: 608 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 667
Query: 266 YELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
L D+M +++ YT ++ L+ + +A +E
Sbjct: 668 LALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLE 707
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 102/191 (53%), Gaps = 8/191 (4%)
Query: 121 KVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL----QTLGLEKN 176
K +D ++D+ RC+ S+ + N++ V+ + G + + +D + + + N
Sbjct: 130 KAVDLFHRMVDEFRCKRSVKSFNSVLNVI---INEGLYHRGLEFYDYVVNSNMNMNISPN 186
Query: 177 TESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQ 235
S NL++ LCK FV++A +++ + + P+ +T+ + G CK R++EA +
Sbjct: 187 GLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLD 246
Query: 236 EMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAE 295
EM+ GC P + Y+ +I C + + ++V +L+D M + C PN VTY ++ L
Sbjct: 247 EMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKG 306
Query: 296 KFDEALQVIER 306
K D+A+ ++ER
Sbjct: 307 KLDKAVSLLER 317
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 97/201 (48%), Gaps = 5/201 (2%)
Query: 106 SPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
SP Y++++D L + + ++ L+D M +G + T ++ G+ AV +
Sbjct: 256 SPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLL 315
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ---HIAPNAHTFNIFIHGWC 222
+ + + N + L++ L K+ A ++ +++ H+ N H +++ I G
Sbjct: 316 ERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHL--NQHIYSVLISGLF 373
Query: 223 KIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVV 282
K + EEA ++M GC+P ++ YS ++ C E ++ E+L+ M A C PN
Sbjct: 374 KEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAY 433
Query: 283 TYTIIMCALAKAEKFDEALQV 303
TY+ +M K +EA+QV
Sbjct: 434 TYSSLMKGFFKTGLCEEAVQV 454
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 119/242 (49%), Gaps = 6/242 (2%)
Query: 70 HLSPNLINILLRRYKDDWKSALGLFKWASL-HSNFQHSPESYDMMVDILGRMKVMDKLRD 128
HL+ ++ ++L+ + K+ + W + + + Y ++VD L R ++ ++
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
+L++M G + T + +M+ F G +AV+++ ++ G +N ++L+D LC
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478
Query: 189 KEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEM---KGYGCRP 244
V++A ++ + L I P+ ++ I G C I ++ A EM + +P
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQP 538
Query: 245 CVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALA-KAEKFDEALQV 303
V++Y+ ++ C +++ S+ +LL+ M + C P+V+T + L+ K+ D+
Sbjct: 539 DVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSF 598
Query: 304 IE 305
+E
Sbjct: 599 LE 600
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 89/196 (45%), Gaps = 1/196 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+ ++ L +DK LL++M I T ++ V + DAVR+ +
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSM 353
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRV 227
+ G N ++L+ L KE E+A ++ ++ ++ PN +++ + G C+ +
Sbjct: 354 EERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKP 413
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
EA + M GC P +YS++++ + + ++ EM CS N Y+++
Sbjct: 414 NEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVL 473
Query: 288 MCALAKAEKFDEALQV 303
+ L + EA+ V
Sbjct: 474 IDGLCGVGRVKEAMMV 489
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 106/246 (43%), Gaps = 36/246 (14%)
Query: 97 ASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAG 156
++++ N + S+++++ L +++ +D+ ++ M + T +M
Sbjct: 177 SNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEE 236
Query: 157 QWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFN 215
+ +AV + D++Q+ G + N+L+D LCK+ + + ++ + + PN T+N
Sbjct: 237 RIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYN 296
Query: 216 IFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQA- 274
IHG C ++++A ++ M C P ++Y T+I ++ + LL M+
Sbjct: 297 TLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEER 356
Query: 275 ----------------------------------QDCSPNVVTYTIIMCALAKAEKFDEA 300
+ C PN+V Y++++ L + K +EA
Sbjct: 357 GYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEA 416
Query: 301 LQVIER 306
+++ R
Sbjct: 417 KEILNR 422
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 107/221 (48%), Gaps = 1/221 (0%)
Query: 85 DDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNT 144
+D+ +ALG F W F+H +Y MV LGR K + LLD+M +G T
Sbjct: 342 NDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVT 401
Query: 145 IAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK 204
+++ + A +A+ +F+ +Q G + + + L+D K F++ A +Y ++
Sbjct: 402 YNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ 461
Query: 205 Q-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFS 263
++P+ T+++ I+ K + AH EM GC P +++Y+ ++ + +N+
Sbjct: 462 AGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQ 521
Query: 264 KVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+L +MQ P+ VTY+I+M L +EA V
Sbjct: 522 NALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 562
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 95/186 (51%), Gaps = 3/186 (1%)
Query: 106 SPES--YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVR 163
SP++ Y ++++ LG+ + L +M +G L T +M A + +A++
Sbjct: 466 SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALK 525
Query: 164 IFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWC 222
++ D+Q G E + + +++++ L ++E+A ++ E++Q + P+ + + + W
Sbjct: 526 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWG 585
Query: 223 KIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVV 282
K VE+A Q M G RP V + ++++ + ++ YELL M A P++
Sbjct: 586 KAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQ 645
Query: 283 TYTIIM 288
TYT+++
Sbjct: 646 TYTLLL 651
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 79/179 (44%), Gaps = 10/179 (5%)
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
L + C I N ++ V+RRF +W A + LQ LGL + N +L +
Sbjct: 290 LTSRQYCNSGHIVEN-VSSVLRRF----RWGPAAE--EALQNLGLRIDAYQANQVLKQM- 341
Query: 189 KEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
++ Y L+ + + HT+ + + ++ + + EM GC+P +
Sbjct: 342 -NDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTV 400
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+Y+ +I Y ++ + ++MQ C P+ VTY ++ AKA D A+ + +R
Sbjct: 401 TYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR 459
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 107/221 (48%), Gaps = 1/221 (0%)
Query: 85 DDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNT 144
+D+ +ALG F W F+H +Y MV LGR K + LLD+M +G T
Sbjct: 342 NDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVT 401
Query: 145 IAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK 204
+++ + A +A+ +F+ +Q G + + + L+D K F++ A +Y ++
Sbjct: 402 YNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ 461
Query: 205 Q-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFS 263
++P+ T+++ I+ K + AH EM GC P +++Y+ ++ + +N+
Sbjct: 462 AGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQ 521
Query: 264 KVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+L +MQ P+ VTY+I+M L +EA V
Sbjct: 522 NALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 562
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 95/186 (51%), Gaps = 3/186 (1%)
Query: 106 SPES--YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVR 163
SP++ Y ++++ LG+ + L +M +G L T +M A + +A++
Sbjct: 466 SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALK 525
Query: 164 IFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWC 222
++ D+Q G E + + +++++ L ++E+A ++ E++Q + P+ + + + W
Sbjct: 526 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWG 585
Query: 223 KIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVV 282
K VE+A Q M G RP V + ++++ + ++ YELL M A P++
Sbjct: 586 KAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQ 645
Query: 283 TYTIIM 288
TYT+++
Sbjct: 646 TYTLLL 651
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 79/179 (44%), Gaps = 10/179 (5%)
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
L + C I N ++ V+RRF +W A + LQ LGL + N +L +
Sbjct: 290 LTSRQYCNSGHIVEN-VSSVLRRF----RWGPAAE--EALQNLGLRIDAYQANQVLKQM- 341
Query: 189 KEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
++ Y L+ + + HT+ + + ++ + + EM GC+P +
Sbjct: 342 -NDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTV 400
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+Y+ +I Y ++ + ++MQ C P+ VTY ++ AKA D A+ + +R
Sbjct: 401 TYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR 459
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 107/221 (48%), Gaps = 1/221 (0%)
Query: 85 DDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNT 144
+D+ +ALG F W F+H +Y MV LGR K + LLD+M +G T
Sbjct: 342 NDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVT 401
Query: 145 IAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK 204
+++ + A +A+ +F+ +Q G + + + L+D K F++ A +Y ++
Sbjct: 402 YNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ 461
Query: 205 Q-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFS 263
++P+ T+++ I+ K + AH EM GC P +++Y+ ++ + +N+
Sbjct: 462 AGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQ 521
Query: 264 KVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+L +MQ P+ VTY+I+M L +EA V
Sbjct: 522 NALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 562
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 95/186 (51%), Gaps = 3/186 (1%)
Query: 106 SPES--YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVR 163
SP++ Y ++++ LG+ + L +M +G L T +M A + +A++
Sbjct: 466 SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALK 525
Query: 164 IFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWC 222
++ D+Q G E + + +++++ L ++E+A ++ E++Q + P+ + + + W
Sbjct: 526 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWG 585
Query: 223 KIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVV 282
K VE+A Q M G RP V + ++++ + ++ YELL M A P++
Sbjct: 586 KAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQ 645
Query: 283 TYTIIM 288
TYT+++
Sbjct: 646 TYTLLL 651
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 79/179 (44%), Gaps = 10/179 (5%)
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
L + C I N ++ V+RRF +W A + LQ LGL + N +L +
Sbjct: 290 LTSRQYCNSGHIVEN-VSSVLRRF----RWGPAAE--EALQNLGLRIDAYQANQVLKQM- 341
Query: 189 KEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
++ Y L+ + + HT+ + + ++ + + EM GC+P +
Sbjct: 342 -NDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTV 400
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+Y+ +I Y ++ + ++MQ C P+ VTY ++ AKA D A+ + +R
Sbjct: 401 TYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR 459
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 7/208 (3%)
Query: 102 NFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEG---SIITLNTIAKVMRRFVGAGQW 158
N + Y +++D L + +D +L ++M +G IIT NT+ + F AG+W
Sbjct: 258 NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL---IGGFCNAGRW 314
Query: 159 ADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIF 217
D ++ D+ + N + ++L+D+ KE + +A Q+ E+ Q IAPN T+N
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 218 IHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDC 277
I G+CK R+EEA + M GC P +++++ +I YC EL EM +
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434
Query: 278 SPNVVTYTIIMCALAKAEKFDEALQVIE 305
N VTY ++ ++ K + A ++ +
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEVAKKLFQ 462
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 96/179 (53%), Gaps = 1/179 (0%)
Query: 128 DLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTL 187
+L+D+M G TL T+ ++ G+ +DAV + D + G + N + +L+ +
Sbjct: 179 ELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM 238
Query: 188 CKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCV 246
CK A ++ ++++ +I +A ++I I G CK ++ A EM+ G + +
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 298
Query: 247 ISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
I+Y+T+I +CN + +LL +M + SPNVVT+++++ + K K EA Q+++
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLK 357
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 125/265 (47%), Gaps = 26/265 (9%)
Query: 56 IIRSLCNDQACDAIHLSPNLINIL-LRRYKDD---WKSALGLF----KW---ASLHSNF- 103
II LC D + D NL N + ++ +K D + + +G F +W A L +
Sbjct: 269 IIDGLCKDGSLDNAF---NLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 104 --QHSPE--SYDMMVDIL---GRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAG 156
+ SP ++ +++D G+++ D+L + Q + IT N++ + F
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL---IDGFCKEN 382
Query: 157 QWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFN 215
+ +A+++ D + + G + + + N+L++ CK ++ +++ E+ + + N T+N
Sbjct: 383 RLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYN 442
Query: 216 IFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQ 275
+ G+C+ ++E A QEM RP ++SY ++ C+ K E+ +++
Sbjct: 443 TLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKS 502
Query: 276 DCSPNVVTYTIIMCALAKAEKFDEA 300
++ Y II+ + A K D+A
Sbjct: 503 KMELDIGIYMIIIHGMCNASKVDDA 527
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 86/185 (46%), Gaps = 5/185 (2%)
Query: 123 MDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNL 182
+D RD++ Q R ++I N + + + Q+ + + +++ G+ + ++++
Sbjct: 73 VDLFRDMI-QSRPLPTVIDFNRLFSAIAK---TKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 183 LLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYG 241
+++ C+ + A + +K P+ FN ++G C RV EA + M G
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 242 CRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEAL 301
+P +I+ +T++ C S L+D M PN VTY ++ + K+ + A+
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 302 QVIER 306
+++ +
Sbjct: 249 ELLRK 253
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/278 (19%), Positives = 120/278 (43%), Gaps = 35/278 (12%)
Query: 26 GFRHQEQCQSLMRSVDILTSKVAKGSSEEEIIRSLCNDQACDAIHLSPNLI--NILLRRY 83
GF + + + ++ VD++ SK CD P+++ NIL+ Y
Sbjct: 377 GFCKENRLEEAIQMVDLMISK------------------GCD-----PDIMTFNILINGY 413
Query: 84 --KDDWKSALGLFKWASLHSNFQHSPESYDMMVDIL---GRMKVMDKLRDLLDQMRCEGS 138
+ L LF+ SL ++ +Y+ +V G+++V KL + R
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTV-TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Query: 139 IITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQ 198
I++ + + G+ A+ IF ++ +E + +++ +C V+ A
Sbjct: 473 IVSYKIL---LDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWD 529
Query: 199 IYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYC 257
++ L + + +A +NI I C+ + +A ++M G P ++Y+ +I+ +
Sbjct: 530 LFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHL 589
Query: 258 NEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAE 295
+ + + EL++EM++ +V T +++ L+ E
Sbjct: 590 GDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGE 627
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/196 (18%), Positives = 88/196 (44%), Gaps = 7/196 (3%)
Query: 109 SYDMMVDIL---GRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
+Y+ ++D R++ ++ DL+ C+ I+T N + + + A + D + +F
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNIL---INGYCKANRIDDGLELF 426
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKI 224
++ G+ NT + N L+ C+ +E A++++ E+ + + P+ ++ I + G C
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
+E+A +++ + Y II CN ++L + + + Y
Sbjct: 487 GELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAY 546
Query: 285 TIIMCALAKAEKFDEA 300
I++ L + + +A
Sbjct: 547 NIMISELCRKDSLSKA 562
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
Query: 160 DAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFI 218
DAV +F D+ N L + K + E + +++ + IA + +T +I I
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 219 HGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCS 278
+ +C+ R++ A T+ ++ G P + ++T++ C E S+ EL+D M
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190
Query: 279 PNVVTYTIIMCALAKAEKFDEALQVIER 306
P ++T ++ L K +A+ +I+R
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDR 218
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 124/259 (47%), Gaps = 4/259 (1%)
Query: 46 KVAKGSSEEEIIRSLCNDQACDAIHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQH 105
K +GSS E+I R L C I L+ L+ ++ R + DWK A L + S
Sbjct: 86 KHHRGSSPEKIKRIL---DKC-GIDLTEELVLEVVNRNRSDWKPAYILSQLVVKQSVHLS 141
Query: 106 SPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
S Y+ ++D+LG+M+ ++ + D+M + T ++ R+ A + +AV +F
Sbjct: 142 SSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVF 201
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIR 225
+ + G++ + + + LL LC+ + VE A ++ ++ + N+ ++GWC +
Sbjct: 202 ERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLG 261
Query: 226 RVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYT 285
V EA +++ CRP V+SY T+I + K EL M +P+V
Sbjct: 262 NVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICN 321
Query: 286 IIMCALAKAEKFDEALQVI 304
++ AL ++ EAL+V
Sbjct: 322 NVIDALCFKKRIPEALEVF 340
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 75/150 (50%), Gaps = 3/150 (2%)
Query: 156 GQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTF 214
G +A R + D+ + S +++ L K+ + +A ++Y + P+
Sbjct: 261 GNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKIC 320
Query: 215 NIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQA 274
N I C +R+ EA +E+ G P V++Y+++++ C + KV+EL++EM+
Sbjct: 321 NNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMEL 380
Query: 275 Q--DCSPNVVTYTIIMCALAKAEKFDEALQ 302
+ CSPN VT++ ++ +++ D L+
Sbjct: 381 KGGSCSPNDVTFSYLLKYSQRSKDVDIVLE 410
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 112/196 (57%), Gaps = 1/196 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y ++++ L + V + ++ ++M+ +G L T VM + G+ DA ++FD++
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRV 227
+ G+ N + N L+ LC+E + +A ++ ++K I PN T+N I G+C + ++
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL 354
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
+A +++K G P +++Y+ ++ +C + + S +++ EM+ + P+ VTYTI+
Sbjct: 355 GKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTIL 414
Query: 288 MCALAKAEKFDEALQV 303
+ A+++ ++A+Q+
Sbjct: 415 IDTFARSDNMEKAIQL 430
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 107/199 (53%), Gaps = 1/199 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+ ++D + + K L ++ G +L T ++ F G + A ++ ++
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRV 227
+ G++ + + +L+DT + + +E+A Q+ L +++ + P+ HT+++ IHG+C ++
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQM 459
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
EA + M C P + Y+T+I YC E + + +LL EM+ ++ +PNV +Y +
Sbjct: 460 NEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYM 519
Query: 288 MCALAKAEKFDEALQVIER 306
+ L K K EA +++E+
Sbjct: 520 IEVLCKERKSKEAERLVEK 538
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 103/208 (49%), Gaps = 3/208 (1%)
Query: 101 SNFQHSPES--YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQW 158
+ F SP Y ++D + ++K +DL +M G + T ++ G
Sbjct: 190 TEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVK 249
Query: 159 ADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIF 217
+++ +Q G+ N + N +++ LCK+ + A Q++ E+++ ++ N T+N
Sbjct: 250 KQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTL 309
Query: 218 IHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDC 277
I G C+ ++ EA+ + +MK G P +I+Y+T+I +C K L +++++
Sbjct: 310 IGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGL 369
Query: 278 SPNVVTYTIIMCALAKAEKFDEALQVIE 305
SP++VTY I++ + A ++++
Sbjct: 370 SPSLVTYNILVSGFCRKGDTSGAAKMVK 397
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 77/153 (50%), Gaps = 1/153 (0%)
Query: 155 AGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHT 213
AG+ + + +L G N L+D CK+ +E+A+ ++ E+ K + N T
Sbjct: 176 AGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERT 235
Query: 214 FNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQ 273
+ + I+G K ++ ++M+ G P + +Y+ ++ C + +++ DEM+
Sbjct: 236 YTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR 295
Query: 274 AQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+ S N+VTY ++ L + K +EA +V+++
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQ 328
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 16/195 (8%)
Query: 59 SLCNDQACDAIHLSPNLI--NILLRRY--KDDWKSALGLFKWASLHSNFQHSPESYDMMV 114
SLC D LSP+L+ NIL+ + K D A + K + S +Y +++
Sbjct: 359 SLCRDLKSRG--LSPSLVTYNILVSGFCRKGDTSGAAKMVKEME-ERGIKPSKVTYTILI 415
Query: 115 DILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLE 174
D R M+K L M G + ++T + ++ F GQ +A R+F + +E
Sbjct: 416 DTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSM----VE 471
Query: 175 KNTESMNLLLDTL----CKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEE 229
KN E ++ +T+ CKE +A ++ E+++ +APN ++ I CK R+ +E
Sbjct: 472 KNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKE 531
Query: 230 AHWTIQEMKGYGCRP 244
A +++M G P
Sbjct: 532 AERLVEKMIDSGIDP 546
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 69/159 (43%)
Query: 148 VMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHI 207
++ +V + ++ F+++ G + N LL + Q + E K +
Sbjct: 100 IINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKV 159
Query: 208 APNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYE 267
+ ++F I I G C+ +E++ + E+ +G P V+ Y+T+I C + K +
Sbjct: 160 VLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKD 219
Query: 268 LLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
L EM N TYT+++ L K + ++ E+
Sbjct: 220 LFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEK 258
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 123/238 (51%), Gaps = 4/238 (1%)
Query: 70 HLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDL 129
+L+P + ++++ ++ ++++ N +HS +Y+++ L + + D +
Sbjct: 66 NLNPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQM 125
Query: 130 LDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCK 189
+ M+ +G + ++ F G+ A + LQ+ +E +N LL+TL K
Sbjct: 126 FECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVK 183
Query: 190 EEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVIS 248
+ VE A +++ E L+ + TFNI I G C + + E+A + M G+GC P +++
Sbjct: 184 LDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVT 243
Query: 249 YSTIIQCYCNEQNFSKVYELLDEMQAQD-CSPNVVTYTIIMCALAKAEKFDEALQVIE 305
Y+T+IQ +C +K E+ ++++ CSP+VVTYT ++ KA K EA +++
Sbjct: 244 YNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLD 301
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 100/196 (51%), Gaps = 1/196 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+++++VD + M ++ +M G + T ++ + GQ + R+++++
Sbjct: 314 TFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM 373
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRV 227
G+ N + ++L++ LC E + +AR++ +L + I P +N I G+CK +V
Sbjct: 374 NARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKV 433
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
EA+ ++EM+ C+P I+++ +I +C + + + +M A CSP+ +T + +
Sbjct: 434 NEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSL 493
Query: 288 MCALAKAEKFDEALQV 303
+ L KA EA +
Sbjct: 494 LSCLLKAGMAKEAYHL 509
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 109/235 (46%), Gaps = 7/235 (2%)
Query: 76 INILLRRYKDDWKSALGLFKWASLHSNFQHSPE--SYDMMVDILGRMKVMDKLRDLLDQM 133
NIL+R K+ L + + S F P+ +Y+ ++ + ++K ++ +
Sbjct: 209 FNILIRGLCGVGKAEKAL-ELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 134 RCEGSIITLN--TIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEE 191
+ GS+ + + T ++ + AG+ +A + DD+ LG+ + N+L+D K
Sbjct: 268 K-SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAG 326
Query: 192 FVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYS 250
+ A +I ++ P+ TF I G+C++ +V + +EM G P +YS
Sbjct: 327 EMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYS 386
Query: 251 TIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+I CNE K ELL ++ ++D P Y ++ KA K +EA ++E
Sbjct: 387 ILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVE 441
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 123/238 (51%), Gaps = 4/238 (1%)
Query: 70 HLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDL 129
+L+P + ++++ ++ ++++ N +HS +Y+++ L + + D +
Sbjct: 66 NLNPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQM 125
Query: 130 LDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCK 189
+ M+ +G + ++ F G+ A + LQ+ +E +N LL+TL K
Sbjct: 126 FECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVK 183
Query: 190 EEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVIS 248
+ VE A +++ E L+ + TFNI I G C + + E+A + M G+GC P +++
Sbjct: 184 LDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVT 243
Query: 249 YSTIIQCYCNEQNFSKVYELLDEMQAQD-CSPNVVTYTIIMCALAKAEKFDEALQVIE 305
Y+T+IQ +C +K E+ ++++ CSP+VVTYT ++ KA K EA +++
Sbjct: 244 YNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLD 301
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 100/196 (51%), Gaps = 1/196 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+++++VD + M ++ +M G + T ++ + GQ + R+++++
Sbjct: 314 TFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM 373
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRV 227
G+ N + ++L++ LC E + +AR++ +L + I P +N I G+CK +V
Sbjct: 374 NARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKV 433
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
EA+ ++EM+ C+P I+++ +I +C + + + +M A CSP+ +T + +
Sbjct: 434 NEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSL 493
Query: 288 MCALAKAEKFDEALQV 303
+ L KA EA +
Sbjct: 494 LSCLLKAGMAKEAYHL 509
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 109/235 (46%), Gaps = 7/235 (2%)
Query: 76 INILLRRYKDDWKSALGLFKWASLHSNFQHSPE--SYDMMVDILGRMKVMDKLRDLLDQM 133
NIL+R K+ L + + S F P+ +Y+ ++ + ++K ++ +
Sbjct: 209 FNILIRGLCGVGKAEKAL-ELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 134 RCEGSIITLN--TIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEE 191
+ GS+ + + T ++ + AG+ +A + DD+ LG+ + N+L+D K
Sbjct: 268 K-SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAG 326
Query: 192 FVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYS 250
+ A +I ++ P+ TF I G+C++ +V + +EM G P +YS
Sbjct: 327 EMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYS 386
Query: 251 TIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+I CNE K ELL ++ ++D P Y ++ KA K +EA ++E
Sbjct: 387 ILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVE 441
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 109/221 (49%), Gaps = 5/221 (2%)
Query: 90 ALGLFKWASL-HSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITL--NTIA 146
AL +F +A H F H+ ++Y ++ L R + D + L+ +R I N
Sbjct: 65 ALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFI 124
Query: 147 KVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH 206
++R + AG++ ++RIF + G++++ S+N LL+ L + + + ++ K+
Sbjct: 125 DLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKES 184
Query: 207 --IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSK 264
I PN T N+ + CK +E A+ + E+ G P +++Y+TI+ Y +
Sbjct: 185 FGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMES 244
Query: 265 VYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+L+EM + P+ TYT++M K +F EA V++
Sbjct: 245 AKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMD 285
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 94/219 (42%), Gaps = 37/219 (16%)
Query: 123 MDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNL 182
M+ + +L++M G T +M + G++++A + DD++ +E N + +
Sbjct: 242 MESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGV 301
Query: 183 LLDTLCKEEFVEQARQIYLE------------------------------------LKQH 206
++ LCKE+ +AR ++ E LK +
Sbjct: 302 MIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNN 361
Query: 207 IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVY 266
P+ + IH CK RV EA E + G P +++Y+T+I C + ++
Sbjct: 362 CMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGELTEAG 420
Query: 267 ELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
L D+M + C PN TY +++ L+K E ++V+E
Sbjct: 421 RLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLE 459
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 4/136 (2%)
Query: 173 LEKNTESMNLLLDTL----CKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVE 228
L+ N N LL TL CKE V +AR+++ E ++ P+ T+N I G C+ +
Sbjct: 358 LKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELT 417
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
EA +M C+P +Y+ +I+ N + +L+EM C PN T+ I+
Sbjct: 418 EAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILF 477
Query: 289 CALAKAEKFDEALQVI 304
L K K ++A++++
Sbjct: 478 EGLQKLGKEEDAMKIV 493
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 1/198 (0%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
Y+ ++D L + K +D DLL++M +G + T ++ +G+W+DA R+ +
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVE 228
+ + + N L+D KE V +A + Y E+ ++ + P+ T+++ I+G C R++
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
EA M GC P V++YS +I YC + +L EM + N VTYTI++
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368
Query: 289 CALAKAEKFDEALQVIER 306
+A K + A ++ R
Sbjct: 369 QGYCRAGKLNVAEEIFRR 386
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 101/204 (49%), Gaps = 2/204 (0%)
Query: 103 FQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAV 162
+ + + +M+ + + MK+ D L ++C + ++ ++++ ++ +
Sbjct: 43 YSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCR-PLPSIADFSRLLSAISKMKKYDVVI 101
Query: 163 RIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGW 221
+++ +Q LG+ N + N+LL+ C+ + A ++ K P+ TF ++G+
Sbjct: 102 YLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGF 161
Query: 222 CKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNV 281
C+ RV +A + +M G G +P V+ Y+TII C + +LL+ M+ P+V
Sbjct: 162 CRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDV 221
Query: 282 VTYTIIMCALAKAEKFDEALQVIE 305
VTY ++ L + ++ +A +++
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVS 245
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 72/145 (49%), Gaps = 1/145 (0%)
Query: 160 DAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFI 218
+A +F + + G + + ++L++ CK + VE +++ E+ Q + N T+ I I
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368
Query: 219 HGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCS 278
G+C+ ++ A + M G P +I+Y+ ++ C+ K +L +MQ
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMD 428
Query: 279 PNVVTYTIIMCALAKAEKFDEALQV 303
++VTY II+ + KA + +A +
Sbjct: 429 ADIVTYNIIIRGMCKAGEVADAWDI 453
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 91/186 (48%), Gaps = 1/186 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y +++ L +D+ ++ M +G + T + ++ + + + +++F ++
Sbjct: 293 TYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM 352
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRV 227
G+ +NT + +L+ C+ + A +I+ + + PN T+N+ +HG C ++
Sbjct: 353 SQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKI 412
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
E+A + +M+ G +++Y+ II+ C + +++ + Q P++ TYT +
Sbjct: 413 EKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTM 472
Query: 288 MCALAK 293
M L K
Sbjct: 473 MLGLYK 478
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 92/201 (45%), Gaps = 1/201 (0%)
Query: 106 SPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
S + ++ + +MK D + L +QM+ G L T ++ F Q + A+
Sbjct: 80 SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL 139
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKI 224
+ LG E + + LL+ C+ + V A ++ ++ PN +N I G CK
Sbjct: 140 GKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKS 199
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
++V+ A + M+ G P V++Y+++I C+ +S ++ M ++ P+V T+
Sbjct: 200 KQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTF 259
Query: 285 TIIMCALAKAEKFDEALQVIE 305
++ A K + EA + E
Sbjct: 260 NALIDACVKEGRVSEAEEFYE 280
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%)
Query: 207 IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVY 266
I N T NI ++ +C+ ++ A + +M G P ++++ +++ +C
Sbjct: 112 IPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDAL 171
Query: 267 ELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+ D+M PNVV Y I+ L K+++ D AL ++ R
Sbjct: 172 YMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNR 211
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 109/199 (54%), Gaps = 13/199 (6%)
Query: 110 YDMMVDILGRMKVMDK---LRDLLDQMRCEGSIITLNTIAKV---MRRFVGAGQWADAVR 163
++ ++D R ++D+ + D+++Q + + T NTIA ++R+ A QW
Sbjct: 402 FNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQW----- 456
Query: 164 IFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWC 222
+F ++ G++ +T S L+D CKE VE+A+++++E+ + + PNA T+N+ I+ +C
Sbjct: 457 LFRMMEG-GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYC 515
Query: 223 KIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVV 282
K +++EA M+ G P +Y+++I C N + L EM + N V
Sbjct: 516 KQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSV 575
Query: 283 TYTIIMCALAKAEKFDEAL 301
TYT+++ L+KA K DEA
Sbjct: 576 TYTVMISGLSKAGKSDEAF 594
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 100/199 (50%), Gaps = 3/199 (1%)
Query: 107 PE--SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRI 164
PE +Y+ +++ + + + +L M+ +G + T +M V G+ +DA ++
Sbjct: 257 PEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKL 316
Query: 165 FDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCK 223
FD+++ G+E + L+ C++ +++A ++ EL ++ ++P+++T+ I G CK
Sbjct: 317 FDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCK 376
Query: 224 IRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVT 283
+ + A + EM+ G + ++T+I YC + + + D M+ + +V T
Sbjct: 377 VGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFT 436
Query: 284 YTIIMCALAKAEKFDEALQ 302
I + +++DEA Q
Sbjct: 437 CNTIASCFNRLKRYDEAKQ 455
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 119/263 (45%), Gaps = 4/263 (1%)
Query: 43 LTSKVAKGSSEEEIIRSLCNDQACDAIHLSPNLINILLRRYKDDWKSALGLFKWASLHSN 102
L+ K K S E++ + +H+ +LI+ R K + K A LF +
Sbjct: 303 LSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCR--KGNMKRAFLLFDELT-EKG 359
Query: 103 FQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAV 162
S +Y ++D + ++ M L+++M+ +G IT ++ + G +A
Sbjct: 360 LSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEAS 419
Query: 163 RIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQ-IYLELKQHIAPNAHTFNIFIHGW 221
I+D ++ G + + + N + + + ++A+Q ++ ++ + + ++ I +
Sbjct: 420 MIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVY 479
Query: 222 CKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNV 281
CK VEEA EM G +P I+Y+ +I YC + + +L M+A P+
Sbjct: 480 CKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDS 539
Query: 282 VTYTIIMCALAKAEKFDEALQVI 304
TYT ++ A+ DEA+++
Sbjct: 540 YTYTSLIHGECIADNVDEAMRLF 562
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 1/159 (0%)
Query: 148 VMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQH 206
V R +V G + + +R+FD + GL + S + L K ++ +I+ +
Sbjct: 160 VFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSG 219
Query: 207 IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVY 266
+ ++ I + G C+ VE++ I+E G +P +Y+TII Y +++FS V
Sbjct: 220 VKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVE 279
Query: 267 ELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+L M+ N VTYT++M K K +A ++ +
Sbjct: 280 GVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFD 318
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 110/243 (45%), Gaps = 12/243 (4%)
Query: 60 LCNDQACDAIHLSPNLINILLRRYKDDWKSALGLFKWASL------HSNFQHSPESYDMM 113
L N+ ++++ + N L+ D G+ AS+ FQ + + +
Sbjct: 386 LMNEMQSKGVNITQVVFNTLI-----DGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTI 440
Query: 114 VDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGL 173
R+K D+ + L +M G ++ + ++ + G +A R+F ++ + G+
Sbjct: 441 ASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGV 500
Query: 174 EKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHW 232
+ N + N+++ CK+ +++AR++ ++ + + P+++T+ IHG C V+EA
Sbjct: 501 QPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMR 560
Query: 233 TIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALA 292
EM G ++Y+ +I + + L DEM+ + + + YT ++ ++
Sbjct: 561 LFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSMH 620
Query: 293 KAE 295
E
Sbjct: 621 SPE 623
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 162 VRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHG 220
+ IF + G++ S+ ++++ LC+ VE+++++ E + I P A+T+N I+
Sbjct: 209 LEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINA 268
Query: 221 WCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPN 280
+ K R ++ MK G ++Y+ +++ S +L DEM+ + +
Sbjct: 269 YVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESD 328
Query: 281 VVTYT 285
V YT
Sbjct: 329 VHVYT 333
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 128/305 (41%), Gaps = 72/305 (23%)
Query: 68 AIHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLR 127
+ +P L+ +LR K + L F W + ++H+ E+Y+M + + G K ++R
Sbjct: 639 TVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMR 698
Query: 128 DLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTL 187
L +MR +G +IT +T A ++ ++ G A+R F +++ +GL ++ + L+ L
Sbjct: 699 SLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVL 758
Query: 188 C--KEEFVEQARQIYLEL-KQHIAPNAH-------------------------------- 212
C K VE+A + + E+ + P+
Sbjct: 759 CEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPV 818
Query: 213 --TFNIFIHGWCKIRRVEEA-----------------------HWTIQ------------ 235
++I+I C+I ++EEA H +Q
Sbjct: 819 TVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVN 878
Query: 236 EMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAE 295
MK G +P V Y+++I + E+ KV E +M+ + C P+VVTYT ++C
Sbjct: 879 SMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLG 938
Query: 296 KFDEA 300
K +EA
Sbjct: 939 KVEEA 943
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/243 (18%), Positives = 109/243 (44%), Gaps = 9/243 (3%)
Query: 68 AIHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLR 127
+ P ++ +L+R A+ F W F H Y+ M+ I G + +D +
Sbjct: 150 SFRFEPEIVENVLKRCFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVD 209
Query: 128 DLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTL 187
+L+ +M G + T ++ + A + + +F+ ++ G E + + N+++ +L
Sbjct: 210 ELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSL 269
Query: 188 CKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCV 246
C + A + Y E +++ I T+ + + K +V+ +Q + R C
Sbjct: 270 CIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVD----VVQSIADDMVRICE 325
Query: 247 IS----YSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQ 302
IS + +++ +C + EL+ E++ ++ + + I++ L +A + +AL+
Sbjct: 326 ISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALE 385
Query: 303 VIE 305
+++
Sbjct: 386 IVD 388
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 101/238 (42%), Gaps = 1/238 (0%)
Query: 68 AIHLSPNLINILLRRYKDDWKSALGL-FKWASLHSNFQHSPESYDMMVDILGRMKVMDKL 126
L NI++R + L L F + +Y M++D + + + +D +
Sbjct: 254 GFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVV 313
Query: 127 RDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDT 186
+ + D M I + +++ F +G+ +A+ + +L+ + + + +L+
Sbjct: 314 QSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKG 373
Query: 187 LCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCV 246
LC+ + A +I +K+ +++ + I I G+ + V +A + +K G P V
Sbjct: 374 LCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRV 433
Query: 247 ISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+Y+ I+Q + F K L +EM P+ V T ++ + EA +V
Sbjct: 434 STYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVF 491
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 82/193 (42%), Gaps = 1/193 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y + + L R+ +++ L E S++ T ++ + G A+ + +
Sbjct: 821 AYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSM 880
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRV 227
+ +G + L+ KE+ +E+ + +++ + P+ T+ I G+ + +V
Sbjct: 881 KEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKV 940
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
EEA + M+ G P +YS I C C +LL EM + +P+ + + +
Sbjct: 941 EEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTV 1000
Query: 288 MCALAKAEKFDEA 300
L + K D A
Sbjct: 1001 FYGLNREGKHDLA 1013
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 51/96 (53%)
Query: 209 PNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYEL 268
P H + I + K +++E+ T Q+M+G C P V++Y+ +I Y + + +
Sbjct: 887 PGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNA 946
Query: 269 LDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
M+ + SP+ TY+ + L +A K ++AL+++
Sbjct: 947 FRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLL 982
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 99/179 (55%), Gaps = 1/179 (0%)
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
+L +M I + T + ++ FV G+ +A +++++ T G+ +T + N L+D C
Sbjct: 302 MLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC 361
Query: 189 KEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
KE + +A Q++ L + + P+ T++I I+ +CK +RV++ +E+ G P I
Sbjct: 362 KENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTI 421
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+Y+T++ +C + EL EM ++ P+VVTY I++ L + ++AL++ E+
Sbjct: 422 TYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 480
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 96/193 (49%), Gaps = 1/193 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
++ ++D+ + + + ++L ++M G T ++ F +A ++FD +
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRV 227
+ G E + + ++L+++ CK + V+ +++ E+ + + PN T+N + G+C+ ++
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 436
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
A QEM G P V++Y ++ C+ +K E+ ++MQ + + Y II
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 496
Query: 288 MCALAKAEKFDEA 300
+ + A K D+A
Sbjct: 497 IHGMCNASKVDDA 509
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 97/198 (48%), Gaps = 1/198 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y ++++ + K +D L ++ +G I T ++ F +G+ A +F ++
Sbjct: 387 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 446
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRV 227
+ G+ + + +LLD LC + +A +I+ ++ K + +NI IHG C +V
Sbjct: 447 VSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKV 506
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
++A + G +P V++Y+ +I C + + S+ L +M+ C+P+ TY I+
Sbjct: 507 DDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNIL 566
Query: 288 MCALAKAEKFDEALQVIE 305
+ A ++++IE
Sbjct: 567 IRAHLGGSGLISSVELIE 584
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 5/136 (3%)
Query: 171 LGLEKNTESMNLLLDTLCKEEFVEQARQIY---LELKQHIAPNAHTFNIFIHGWCKIRRV 227
LG E +T + + L++ C E V +A + +E+KQ P+ T + I+G C RV
Sbjct: 134 LGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR--PDLVTVSTLINGLCLKGRV 191
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
EA I M YG +P ++Y ++ C N + +L +M+ ++ +VV Y+I+
Sbjct: 192 SEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIV 251
Query: 288 MCALAKAEKFDEALQV 303
+ +L K FD+AL +
Sbjct: 252 IDSLCKDGSFDDALSL 267
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 79/171 (46%), Gaps = 1/171 (0%)
Query: 123 MDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNL 182
++ ++L +M G ++ T ++ G+ A+ IF+ +Q + N+
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Query: 183 LLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYG 241
++ +C V+ A ++ L + + P+ T+N+ I G CK + EA ++MK G
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Query: 242 CRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALA 292
C P +Y+ +I+ + EL++EM+ S + T +++ L+
Sbjct: 556 CTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS 606
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
Query: 172 GLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEA 230
G+E + +M ++++ C+++ + A + K P+ TF+ ++G+C RV EA
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159
Query: 231 HWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCA 290
+ M RP +++ ST+I C + S+ L+D M P+ VTY ++
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 291 LAKAEKFDEALQVIER 306
L K+ AL + +
Sbjct: 220 LCKSGNSALALDLFRK 235
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 102/198 (51%), Gaps = 1/198 (0%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
Y+ ++D L + K MD +L +M +G + T + ++ G+W+DA R+ D+
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVE 228
+ N + + L+D KE + +A ++Y E+ K+ I P+ T++ I+G+C R++
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
EA + M C P V++YST+I+ +C + + EL EM + N VTYT ++
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 289 CALAKAEKFDEALQVIER 306
+A D A V ++
Sbjct: 441 HGFFQARDCDNAQMVFKQ 458
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
L+DQM G T ++ + ++AV + D + G + + + +++ LC
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 189 KEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
K ++ A + ++ K I + +N I G CK + +++A EM G RP V
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
+YS++I C CN +S LL +M + +PNVVT++ ++ A K K EA
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 91/183 (49%), Gaps = 1/183 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y ++ + K +++ +L +M G + T ++ F A +A +F +
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 459
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRV 227
++G+ N + N+LLD LCK + +A ++ L++ + P+ +T+NI I G CK +V
Sbjct: 460 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKV 519
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
E+ + G P VI+Y+T+I +C + + + LL +M+ PN TY +
Sbjct: 520 EDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTL 579
Query: 288 MCA 290
+ A
Sbjct: 580 IRA 582
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 89/196 (45%), Gaps = 1/196 (0%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
++ ++ + +M + + L +QM+ G L T + + F Q + A+ + +
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVE 228
LG E + +++ LL+ C + + A + ++ + P+ TF IHG +
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
EA + +M GC+P +++Y T++ C + LL +M+ +VV Y I+
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 289 CALAKAEKFDEALQVI 304
L K + D+AL +
Sbjct: 266 DGLCKYKHMDDALNLF 281
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 90/188 (47%), Gaps = 7/188 (3%)
Query: 123 MDKLRDLLDQM---RCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTES 179
+D DL M R SI+ N K++ ++ + + + +QTLG+ + +
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFN---KLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120
Query: 180 MNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMK 238
++ ++ C+ + A + ++ K P+ T + ++G+C +R+ +A + +M
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 239 GYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFD 298
G +P +++T+I S+ L+D+M + C P++VTY ++ L K D
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 299 EALQVIER 306
AL ++++
Sbjct: 241 LALSLLKK 248
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 89/188 (47%), Gaps = 4/188 (2%)
Query: 118 GRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNT 177
G++ +KL D + + + I T +++ + F + +A +F+ + + N
Sbjct: 342 GKLVEAEKLYDEMIKRSIDPDIFTYSSL---INGFCMHDRLDEAKHMFELMISKDCFPNV 398
Query: 178 ESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQE 236
+ + L+ CK + VE+ +++ E+ Q + N T+ IHG+ + R + A ++
Sbjct: 399 VTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 458
Query: 237 MKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEK 296
M G P +++Y+ ++ C +K + + +Q P++ TY I++ + KA K
Sbjct: 459 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 518
Query: 297 FDEALQVI 304
++ ++
Sbjct: 519 VEDGWELF 526
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 66/120 (55%), Gaps = 1/120 (0%)
Query: 156 GQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTF 214
G+ A A+ +F+ LQ +E + + N++++ +CK VE +++ L + ++PN +
Sbjct: 482 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAY 541
Query: 215 NIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQA 274
N I G+C+ EEA +++MK G P +Y+T+I+ + + EL+ EM++
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRS 601
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/185 (18%), Positives = 86/185 (46%), Gaps = 1/185 (0%)
Query: 123 MDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNL 182
+D+ + + + M + + T + +++ F A + + + +F ++ GL NT +
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 183 LLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYG 241
L+ + + A+ ++ ++ + PN T+NI + G CK ++ +A + ++
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 242 CRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEAL 301
P + +Y+ +I+ C +EL + + SPNV+ Y ++ + +EA
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558
Query: 302 QVIER 306
++++
Sbjct: 559 SLLKK 563
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 129/275 (46%), Gaps = 40/275 (14%)
Query: 70 HLSPNLINILLRRYKDDWKSALGLFKWASLH--SNFQHSPESYDMMVDILGRMKVMDKLR 127
+++P+ + L+R KD KS + +F A+ + + H S+ MV L
Sbjct: 13 NITPSQVIKLMRAEKDVEKS-MAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAE 71
Query: 128 DLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIF---------------------- 165
DL+ +M+ E +++ + + + R + + D++R+F
Sbjct: 72 DLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAIL 131
Query: 166 -------------DDLQTLGLEKNTESMNLLLDTLCKEE-FVEQARQIYLEL-KQHIAPN 210
+++ +GL S+N+L+ LC+ + V+ +I+LE+ K+ P+
Sbjct: 132 VEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPD 191
Query: 211 AHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLD 270
++T+ I G C+ R++EA EM C P V++Y+++I C +N + L+
Sbjct: 192 SYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLE 251
Query: 271 EMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
EM+++ PNV TY+ +M L K + +A+++ E
Sbjct: 252 EMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFE 286
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 96/170 (56%), Gaps = 3/170 (1%)
Query: 138 SIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQAR 197
++ +LN + K + R G ++IF ++ G + ++ + L+ LC+ +++A+
Sbjct: 155 TVASLNVLIKALCR--NDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAK 212
Query: 198 QIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCY 256
+++ E+ ++ AP T+ I+G C + V+EA ++EMK G P V +YS+++
Sbjct: 213 KLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGL 272
Query: 257 CNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
C + + EL + M A+ C PN+VTYT ++ L K +K EA+++++R
Sbjct: 273 CKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDR 322
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 4/172 (2%)
Query: 135 CEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVE 194
C+ T T+ + RF G+ +A ++F ++ + L++ LC + V+
Sbjct: 188 CDPDSYTYGTLISGLCRF---GRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVD 244
Query: 195 QARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTII 253
+A + E+K + I PN T++ + G CK R +A + M GCRP +++Y+T+I
Sbjct: 245 EAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLI 304
Query: 254 QCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
C EQ + ELLD M Q P+ Y ++ KF EA ++
Sbjct: 305 TGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLD 356
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 88/179 (49%), Gaps = 1/179 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y ++ L R +D+ + L +M + T+ T ++ G+ +A+R +++
Sbjct: 194 TYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEM 253
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGWCKIRRV 227
++ G+E N + + L+D LCK+ QA +++ + + + PN T+ I G CK +++
Sbjct: 254 KSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKI 313
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTI 286
+EA + M G +P Y +I +C F + LDEM +PN +T+ I
Sbjct: 314 QEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNI 372
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 96/193 (49%), Gaps = 1/193 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
SY ++D + D+ +L +MR G + + ++ + G+ +A+ I ++
Sbjct: 411 SYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREM 470
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRV 227
++G++K+ + N LL K+ ++ ++++ E+K +H+ PN T++ I G+ K
Sbjct: 471 ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLY 530
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
+EA +E K G R V+ YS +I C L+DEM + SPNVVTY I
Sbjct: 531 KEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSI 590
Query: 288 MCALAKAEKFDEA 300
+ A ++ D +
Sbjct: 591 IDAFGRSATMDRS 603
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 109 SYDMMVDILGR----MKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRI 164
+Y+ ++D G+ K + K D + + + IT N++ V R G W A +
Sbjct: 305 TYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSR---GGLWEAARNL 361
Query: 165 FDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHG--- 220
FD++ +E++ S N LLD +CK ++ A +I ++ + I PN +++ I G
Sbjct: 362 FDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAK 421
Query: 221 --------------------------------WCKIRRVEEAHWTIQEMKGYGCRPCVIS 248
+ K+ R EEA ++EM G + V++
Sbjct: 422 AGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVT 481
Query: 249 YSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
Y+ ++ Y + + +V ++ EM+ + PN++TY+ ++ +K + EA+++
Sbjct: 482 YNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 2/220 (0%)
Query: 87 WKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIA 146
W++A LF + + + SY+ ++D + + MD ++L QM + + + + +
Sbjct: 355 WEAARNLFDEMT-NRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 147 KVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ- 205
V+ F AG++ +A+ +F +++ LG+ + S N LL K E+A I E+
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 206 HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKV 265
I + T+N + G+ K + +E EMK P +++YST+I Y + +
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533
Query: 266 YELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
E+ E ++ +VV Y+ ++ AL K A+ +I+
Sbjct: 534 MEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLID 573
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 93/200 (46%), Gaps = 6/200 (3%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEG---SIITLNTIAKVMRRFVGAGQWADAVRIF 165
++ ++ GR + ++ + + M+ G +++T N + + G ++ + F
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGK--GGMEFKQVAKFF 327
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKI 224
D++Q G++ + + N LL + E AR ++ E+ + I + ++N + CK
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG 387
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
+++ A + +M P V+SYST+I + F + L EM+ + + V+Y
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY 447
Query: 285 TIIMCALAKAEKFDEALQVI 304
++ K + +EAL ++
Sbjct: 448 NTLLSIYTKVGRSEEALDIL 467
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 113/252 (44%), Gaps = 36/252 (14%)
Query: 90 ALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVM 149
AL F+W +H +++ M+ +LG + ++ R +L M +G + ++
Sbjct: 133 ALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLI 192
Query: 150 RRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKE---------------EFVE 194
+ AG ++V+IF ++ LG+E+ +S N L + + E VE
Sbjct: 193 ESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVE 252
Query: 195 QARQIY--------LELK-------------QHIAPNAHTFNIFIHGWCKIRRVEEAHWT 233
R Y L L+ + I+P+ TFN I+G+C+ ++++EA
Sbjct: 253 PTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKL 312
Query: 234 IQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAK 293
EMKG P V+SY+T+I+ Y + +EM++ PN TY+ ++ L
Sbjct: 313 FVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCD 372
Query: 294 AEKFDEALQVIE 305
A K EA +++
Sbjct: 373 AGKMVEAKNILK 384
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 102/200 (51%), Gaps = 2/200 (1%)
Query: 108 ESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDD 167
+SY+ + ++ R + ++M EG T +T ++ F + + A+R F+D
Sbjct: 221 KSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFED 280
Query: 168 LQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRR 226
++T G+ + + N +++ C+ + +++A ++++E+K + I P+ ++ I G+ + R
Sbjct: 281 MKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDR 340
Query: 227 VEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSP-NVVTYT 285
V++ +EM+ G P +YST++ C+ + +L M A+ +P + +
Sbjct: 341 VDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFL 400
Query: 286 IIMCALAKAEKFDEALQVIE 305
++ + +KA A +V++
Sbjct: 401 KLLVSQSKAGDMAAATEVLK 420
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 110/241 (45%), Gaps = 36/241 (14%)
Query: 102 NFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADA 161
N + Y +++D L + +D +L ++M +G + T ++ F AG+W D
Sbjct: 258 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDG 317
Query: 162 VRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL------------------ 203
++ D+ + N + ++L+D+ KE + +A +++ E+
Sbjct: 318 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 377
Query: 204 ---KQHIA---------------PNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPC 245
+ H+ PN TFNI I+G+CK R+++ ++M G
Sbjct: 378 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVAD 437
Query: 246 VISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
++Y+T+IQ +C + EL EM ++ PN+VTY I++ L + ++AL++ E
Sbjct: 438 TVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFE 497
Query: 306 R 306
+
Sbjct: 498 K 498
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 96/184 (52%), Gaps = 4/184 (2%)
Query: 118 GRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNT 177
GR+ +L D + +M + +IT+NT+ + +G+ A+A+ + D + G + N
Sbjct: 172 GRVSEALELVDRMVEMGHKPDLITINTL---VNGLCLSGKEAEAMLLIDKMVEYGCQPNA 228
Query: 178 ESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQE 236
+ +L+ +CK A ++ ++++ +I +A ++I I G CK ++ A E
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNE 288
Query: 237 MKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEK 296
M+ G +I+Y+ +I +CN + +LL +M + +PNVVT+++++ + K K
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348
Query: 297 FDEA 300
EA
Sbjct: 349 LREA 352
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 10/219 (4%)
Query: 90 ALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVM 149
A+ LF+ +HS + + + + + K D + L QM +G L T++ ++
Sbjct: 72 AIDLFR-DMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 130
Query: 150 RRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIA- 208
F + A + LG E NT + + L++ LC E V +A LEL +
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA----LELVDRMVE 186
Query: 209 ----PNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSK 264
P+ T N ++G C + EA I +M YGC+P ++Y ++ C +
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 246
Query: 265 VYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
ELL +M+ ++ + V Y+II+ L K D A +
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNL 285
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 106/238 (44%), Gaps = 12/238 (5%)
Query: 71 LSPNLI--NILLRRYKDDWKSALGLFKWASLHSNFQH---SPES--YDMMVDILGRMKVM 123
++PN++ ++L+ + + K L + LH H +P++ Y ++D + +
Sbjct: 329 INPNVVTFSVLIDSFVKEGK----LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 384
Query: 124 DKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLL 183
DK ++D M +G + T ++ + A + D + +F + G+ +T + N L
Sbjct: 385 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 444
Query: 184 LDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGC 242
+ C+ + A++++ E+ + + PN T+ I + G C E+A ++++
Sbjct: 445 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 504
Query: 243 RPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
+ Y+ II CN ++L + + P V TY I++ L K EA
Sbjct: 505 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEA 562
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 104/230 (45%), Gaps = 13/230 (5%)
Query: 64 QACDAIHLSPNL--INILLRRY--KDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGR 119
+ CD PN+ NIL+ Y + L LF+ SL + +Y+ ++
Sbjct: 397 KGCD-----PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV-TYNTLIQGFCE 450
Query: 120 MKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTES 179
+ ++ ++L +M + T ++ G+ A+ IF+ ++ +E +
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510
Query: 180 MNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMK 238
N+++ +C V+ A ++ L + + P T+NI I G CK + EA ++M+
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570
Query: 239 GYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
G P +Y+ +I+ + + + +K +L++E++ C +V TI M
Sbjct: 571 EDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR--CGFSVDASTIKM 618
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 53/104 (50%)
Query: 203 LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNF 262
+K PN TF+ I+G C RV EA + M G +P +I+ +T++ C
Sbjct: 150 IKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKE 209
Query: 263 SKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
++ L+D+M C PN VTY ++ + K+ + A++++ +
Sbjct: 210 AEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRK 253
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 114/248 (45%), Gaps = 31/248 (12%)
Query: 90 ALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVM 149
AL FK + + F+H+P ++++M+ L +D ++ LL QM+ +G + + V+
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 118
Query: 150 RRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IA 208
+ G AV +F ++ G + + + N +LDTL E ++ +Y ++K+
Sbjct: 119 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 178
Query: 209 PNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQC------------- 255
PN T+N+ + CK +V+ A + EM GC P +SY+T+I
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL 238
Query: 256 -----------------YCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFD 298
C E ++ +EL+ EM + SPNV++Y+ ++ L + + +
Sbjct: 239 AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE 298
Query: 299 EALQVIER 306
A + +
Sbjct: 299 LAFSFLTQ 306
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 111/234 (47%), Gaps = 5/234 (2%)
Query: 75 LINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMR 134
LIN L + + D+K A L + + + SY ++++L ++ L QM
Sbjct: 252 LINGLCKEH--DYKGAFELMR-EMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQML 308
Query: 135 CEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL-QTLGLEKNTESMNLLLDTLCKEEFV 193
G + T++ +++ G DA+ +++ + + GL+ N + N L+ C +
Sbjct: 309 KRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNI 368
Query: 194 EQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTI 252
+A ++ +++ +PN T+ I+G+ K ++ A + +M GC P V+ Y+ +
Sbjct: 369 VKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNM 428
Query: 253 IQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
++ C F + L++ M ++C+P+V T+ + L A + D A +V +
Sbjct: 429 VEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 482
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 94/249 (37%), Gaps = 39/249 (15%)
Query: 96 WASLHSNFQHSPE--SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFV 153
W + F P +Y+ +V + K + M G + T ++ F
Sbjct: 339 WNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFA 398
Query: 154 GAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKE-EFVEQARQIYLELKQHIAPNAH 212
G AV I++ + T G N +++ LC+ +F E I + K++ AP+
Sbjct: 399 KRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVP 458
Query: 213 TFNIFIHGWC------------------------------------KIRRVEEAHWTIQE 236
TFN FI G C K R+EEA+ +E
Sbjct: 459 TFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTRE 518
Query: 237 MKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEK 296
+ G +Y+T++ CN +L+ +M SP+ +T +I+ A K K
Sbjct: 519 IFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGK 578
Query: 297 FDEALQVIE 305
+ A Q+++
Sbjct: 579 AERAAQMLD 587
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 94/204 (46%), Gaps = 10/204 (4%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL- 168
Y MV+ L R + L++ M E ++ T ++ AG+ A ++F +
Sbjct: 425 YTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQME 484
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQA----RQIYLELKQHIAPNAHTFNIFIHGWCKI 224
Q N + N LLD L K +E+A R+I++ + + ++ T+N +HG C
Sbjct: 485 QQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFM---RGVEWSSSTYNTLLHGSCNA 541
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQA--QDCSPNVV 282
A + +M G P I+ + II YC + + ++LD + + P+V+
Sbjct: 542 GLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVI 601
Query: 283 TYTIIMCALAKAEKFDEALQVIER 306
+YT ++ L ++ ++ + ++ER
Sbjct: 602 SYTNVIWGLCRSNCREDGVILLER 625
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 119/277 (42%), Gaps = 24/277 (8%)
Query: 27 FRHQEQ--CQSLMRSVDILTSKVAKGSSEEEII---RSLCNDQACDAIHLSPNLINILLR 81
F H E+ C +R+ L + AK S + + + C + + N++ L R
Sbjct: 375 FSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCR 434
Query: 82 RYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDIL---GRMKVMDKL-RDLLDQMRCEG 137
K +K A L + S N S +++ + L GR+ +K+ R + Q RC
Sbjct: 435 HSK--FKEAESLIEIMS-KENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPP 491
Query: 138 SIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQAR 197
+I+T N + + + A + +A + ++ G+E ++ + N LL C A
Sbjct: 492 NIVTYNELLDGLAK---ANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIAL 548
Query: 198 QIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGC-----RPCVISYST 251
Q+ ++ +P+ T N+ I +CK + E A Q + C RP VISY+
Sbjct: 549 QLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAA---QMLDLVSCGRRKWRPDVISYTN 605
Query: 252 IIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
+I C LL+ M + P++ T+++++
Sbjct: 606 VIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLI 642
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 124/269 (46%), Gaps = 16/269 (5%)
Query: 43 LTSKVAKGSSEEEIIRSLCNDQACDAIHLSPNLINILLRRYKDDWKSALGLFKWASLHSN 102
L +V++ SE + + SL D + D H S L+ +D+W+ A FKW
Sbjct: 97 LIRQVSELESEADAMASL-EDSSFDLNHDS---FYSLIWELRDEWRLAFLAFKWGEKRGC 152
Query: 103 FQHSPESYDMMVDILGRMKVMD----KLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQW 158
+S D+M+ +LG + + +RD+ + S T + +M R+ A
Sbjct: 153 --DDQKSCDLMIWVLGNHQKFNIAWCLIRDMFNV-----SKDTRKAMFLMMDRYAAANDT 205
Query: 159 ADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFI 218
+ A+R FD + E+ LL LC+ +E+A + L K+ + FN+ +
Sbjct: 206 SQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKLFPVDVEGFNVIL 265
Query: 219 HGWCKI-RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDC 277
+GWC I V EA +EM Y P SYS +I C+ N L DEM+ +
Sbjct: 266 NGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGL 325
Query: 278 SPNVVTYTIIMCALAKAEKFDEALQVIER 306
+P + Y ++ L + + FDEA++++++
Sbjct: 326 APGIEVYNSLVYVLTREDCFDEAMKLMKK 354
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 86/150 (57%), Gaps = 1/150 (0%)
Query: 155 AGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHT 213
+G +AV + ++++L L + + +L++ LC E+ V +A +++ ++K + I P++ T
Sbjct: 352 SGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSAT 411
Query: 214 FNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQ 273
+N IHG+CK +E+A EM G P +I++ST+I YCN ++ L EM
Sbjct: 412 YNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMT 471
Query: 274 AQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
+ P+VVTYT ++ A K EAL++
Sbjct: 472 IKGIVPDVVTYTALIDAHFKEANMKEALRL 501
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 1/183 (0%)
Query: 125 KLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLL 184
K LLD+M G + + + +A ++F+ ++ G+ N + + ++
Sbjct: 217 KKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMI 276
Query: 185 DTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCR 243
D CK V QA +Y E L + PN F + G+CK R + A M +G
Sbjct: 277 DGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVD 336
Query: 244 PCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
P + Y+ +I +C N + LL EM++ + SP+V TYTI++ L ++ EA ++
Sbjct: 337 PNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRL 396
Query: 304 IER 306
++
Sbjct: 397 FQK 399
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 3/200 (1%)
Query: 107 PESYDMMVDILG--RMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRI 164
P Y + IL R M++ + + M+ G + L T + ++ + G A +
Sbjct: 232 PNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGL 291
Query: 165 FDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCK 223
+ ++ L N L+D CK + AR +++ + K + PN + +N IHG CK
Sbjct: 292 YKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCK 351
Query: 224 IRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVT 283
+ EA + EM+ P V +Y+ +I C E ++ L +M+ + P+ T
Sbjct: 352 SGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSAT 411
Query: 284 YTIIMCALAKAEKFDEALQV 303
Y ++ K ++AL +
Sbjct: 412 YNSLIHGYCKEYNMEQALDL 431
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 1/146 (0%)
Query: 157 QWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFN 215
Q A+A R+F ++ + ++ + N L+ CKE +EQA + E+ + PN TF+
Sbjct: 389 QVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFS 448
Query: 216 IFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQ 275
I G+C +R ++ A EM G P V++Y+ +I + E N + L +M
Sbjct: 449 TLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEA 508
Query: 276 DCSPNVVTYTIIMCALAKAEKFDEAL 301
PN T+ ++ K + A+
Sbjct: 509 GIHPNDHTFACLVDGFWKEGRLSVAI 534
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 3/144 (2%)
Query: 163 RIFDDLQTLGLEK-NTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGW 221
R+F+ L+ + K + +LL+ + E+A + E+K +P++ ++G
Sbjct: 117 RLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMK--CSPDSKACLSILNGL 174
Query: 222 CKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNV 281
+ RR + Q M G P V Y + QC + +SK +LLDEM + PNV
Sbjct: 175 VRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNV 234
Query: 282 VTYTIIMCALAKAEKFDEALQVIE 305
YTI + L + K +EA ++ E
Sbjct: 235 YIYTIYILDLCRDNKMEEAEKMFE 258
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 102/198 (51%), Gaps = 1/198 (0%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
Y+ ++D L K ++ +L +M +G + T ++R G+W+DA R+ D+
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVE 228
+ N + + L+D KE + +A ++Y E+ K+ I P+ T++ I+G+C R++
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
EA + M C P V++Y+T+I+ +C + + EL EM + N VTYT ++
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 289 CALAKAEKFDEALQVIER 306
+A + D A V ++
Sbjct: 439 HGFFQARECDNAQIVFKQ 456
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 97/200 (48%), Gaps = 7/200 (3%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQM---RCEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
+Y ++V+ L + +D LL +M + E ++ NTI + + DA+ +F
Sbjct: 223 TYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVN---DALNLF 279
Query: 166 DDLQTLGLEKNTESMNLLLDTLCK-EEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKI 224
++ G+ N + N L+ LC + + +R + +++ I PN TF+ I + K
Sbjct: 280 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 339
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
++ EA EM P + +YS++I +C + + + M ++DC PNVVTY
Sbjct: 340 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 399
Query: 285 TIIMCALAKAEKFDEALQVI 304
++ KA++ DE +++
Sbjct: 400 NTLIKGFCKAKRVDEGMELF 419
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 85/170 (50%), Gaps = 4/170 (2%)
Query: 132 QMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEE 191
+M + T NT+ + R + ++AV + D + G + + + ++++ LCK
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRH---NRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRG 235
Query: 192 FVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYS 250
++ A + +++Q I P +N I C + V +A EM G RP V++Y+
Sbjct: 236 DIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 295
Query: 251 TIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
++I+C CN +S LL +M + +PNVVT++ ++ A K K EA
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 345
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 1/196 (0%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
+ ++ + +M D + L +QM+ G L T + ++ F Q + A+ + +
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVE 228
LG E + ++N LL+ C + A + ++ + P++ TFN IHG + R
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
EA + M GC+P +++Y ++ C + LL +M+ P VV Y I+
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 289 CALAKAEKFDEALQVI 304
AL + ++AL +
Sbjct: 264 DALCNYKNVNDALNLF 279
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 144 TIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY-LE 202
T + ++ FV G+ +A +++D++ ++ + + + L++ C + +++A+ ++ L
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387
Query: 203 LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNF 262
+ + PN T+N I G+CK +RV+E +EM G ++Y+T+I + +
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447
Query: 263 SKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+ +M + P+++TY+I++ L K + AL V E
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFE 490
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 93/190 (48%), Gaps = 2/190 (1%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+ ++ + K +D+ +L +M G + T ++ F A + +A +F +
Sbjct: 398 TYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQM 457
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRV 227
+ G+ + + ++LLD LC VE A ++ L + + P+ +T+NI I G CK +V
Sbjct: 458 VSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 517
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY-TI 286
E+ + G +P V++Y+T++ +C + + L EM+ + P+ TY T+
Sbjct: 518 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTL 577
Query: 287 IMCALAKAEK 296
I L +K
Sbjct: 578 IRAHLRDGDK 587
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 106/231 (45%), Gaps = 13/231 (5%)
Query: 88 KSALGLFKWASLHSNFQH--------SPESYD---MMVDILGRMKVMDKLRDLLDQMRCE 136
+S LG K + +F H S YD + ++ L +K+ D + +L M
Sbjct: 17 RSLLGKGKCGTAPPSFSHCSFWVRDFSGVRYDYRKISINRLNDLKLDDAV-NLFGDMVKS 75
Query: 137 GSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQA 196
++ +K++ ++ + + + +Q LG+ N + ++L++ C+ + A
Sbjct: 76 RPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLA 135
Query: 197 RQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQC 255
+ ++ K P+ T N ++G+C R+ +A + +M G +P +++T+I
Sbjct: 136 LAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHG 195
Query: 256 YCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
S+ L+D M + C P++VTY I++ L K D AL ++++
Sbjct: 196 LFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKK 246
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 84/170 (49%), Gaps = 4/170 (2%)
Query: 136 EGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQ 195
E I+TLN++ + F + +DAV + + +G + ++ + N L+ L + +
Sbjct: 148 EPDIVTLNSL---LNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASE 204
Query: 196 ARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQ 254
A + + + P+ T+ I ++G CK ++ A +++M+ P V+ Y+TII
Sbjct: 205 AVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIID 264
Query: 255 CYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
CN +N + L EM + PNVVTY ++ L ++ +A +++
Sbjct: 265 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 314
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
Query: 176 NTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTI 234
N + N L+ CK + V++ +++ E+ Q + N T+ IHG+ + R + A
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 235 QEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKA 294
++M G P +++YS ++ CN + + +Q P++ TY I++ + KA
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKA 514
Query: 295 EKFDEA 300
K ++
Sbjct: 515 GKVEDG 520
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 77/152 (50%), Gaps = 1/152 (0%)
Query: 124 DKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLL 183
D + + QM +G + + T + ++ G+ A+ +F+ LQ +E + + N++
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507
Query: 184 LDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGC 242
++ +CK VE ++ L + + PN T+ + G+C+ EEA +EMK G
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567
Query: 243 RPCVISYSTIIQCYCNEQNFSKVYELLDEMQA 274
P +Y+T+I+ + + + + EL+ EM++
Sbjct: 568 LPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 77/167 (46%), Gaps = 4/167 (2%)
Query: 135 CEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVE 194
C +++T NT+ K F A + + + +F ++ GL NT + L+ + +
Sbjct: 392 CFPNVVTYNTLIK---GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECD 448
Query: 195 QARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTII 253
A+ ++ ++ + P+ T++I + G C +VE A + ++ P + +Y+ +I
Sbjct: 449 NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMI 508
Query: 254 QCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
+ C ++L + + PNVVTYT +M + +EA
Sbjct: 509 EGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 555
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 116/231 (50%), Gaps = 33/231 (14%)
Query: 86 DWKSALGLFKWASLHSNFQHSPESYDMMVDIL---GRMKVMDKLRDLLDQMRCEGSIITL 142
D K+AL W S + ++HS SY ++ +L G + V+ K+R L+ I +
Sbjct: 102 DPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLM--------IKSC 153
Query: 143 NTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTE--------SMNLLLDTLCKEEFVE 194
+++ DA+ + D + + ++ E N LL++L + V+
Sbjct: 154 DSVG-------------DALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVD 200
Query: 195 QARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTII 253
+ +Q+Y+E L+ + PN +T+N ++G+CK+ VEEA+ + ++ G P +Y+++I
Sbjct: 201 EMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLI 260
Query: 254 QCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
YC ++ +++ +EM + C N V YT ++ L A + DEA+ +
Sbjct: 261 MGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLF 311
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 118/222 (53%), Gaps = 3/222 (1%)
Query: 84 KDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLN 143
+ D SA +F L + + +Y ++ L + +D+ DL +M+ + T+
Sbjct: 266 RKDLDSAFKVFNEMPL-KGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVR 324
Query: 144 TIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE- 202
T +++ G+ + ++A+ + +++ G++ N + +L+D+LC + E+AR++ +
Sbjct: 325 TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM 384
Query: 203 LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNF 262
L++ + PN T+N I+G+CK +E+A ++ M+ P +Y+ +I+ YC + N
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNV 443
Query: 263 SKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
K +L++M + P+VVTY ++ ++ FD A +++
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 97/198 (48%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y +++D L +K R+LL QM +G + + T ++ + G DAV + + +
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVE 228
++ L NT + N L+ CK + + L++ + P+ T+N I G C+ +
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
A+ + M G P +Y+++I C + + +L D ++ + +PNVV YT ++
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539
Query: 289 CALAKAEKFDEALQVIER 306
KA K DEA ++E+
Sbjct: 540 DGYCKAGKVDEAHLMLEK 557
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 161 AVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIH 219
A ++F+++ G +N + L+ LC +++A +++++K P T+ + I
Sbjct: 272 AFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIK 331
Query: 220 GWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSP 279
C R EA ++EM+ G +P + +Y+ +I C++ F K ELL +M + P
Sbjct: 332 SLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP 391
Query: 280 NVVTYTIIMCALAKAEKFDEALQVIE 305
NV+TY ++ K ++A+ V+E
Sbjct: 392 NVITYNALINGYCKRGMIEDAVDVVE 417
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 5/181 (2%)
Query: 121 KVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESM 180
K M L +L++ + ++T N++ R +G + A R+ + GL + +
Sbjct: 445 KAMGVLNKMLER-KVLPDVVTYNSLIDGQCR---SGNFDSAYRLLSLMNDRGLVPDQWTY 500
Query: 181 NLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKG 239
++D+LCK + VE+A ++ L+Q + PN + I G+CK +V+EAH +++M
Sbjct: 501 TSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS 560
Query: 240 YGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDE 299
C P ++++ +I C + + L ++M P V T TI++ L K FD
Sbjct: 561 KNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDH 620
Query: 300 A 300
A
Sbjct: 621 A 621
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 99/196 (50%), Gaps = 1/196 (0%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
Y+ +++ L R ++D+++ + +M + + T K++ + G +A + +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVE 228
GL+ + + L+ C+ + ++ A +++ E+ + N + IHG C RR++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
EA +MK C P V +Y+ +I+ C + S+ L+ EM+ PN+ TYT+++
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 289 CALAKAEKFDEALQVI 304
+L KF++A +++
Sbjct: 366 DSLCSQCKFEKARELL 381
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 112/276 (40%), Gaps = 42/276 (15%)
Query: 71 LSPNL--INILLRRY-KDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLR 127
LSPN N L++ Y K + A+G+ L +Y+ ++D R D
Sbjct: 424 LSPNTRTYNELIKGYCKSNVHKAMGVLN-KMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 128 DLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTL 187
LL M G + T ++ + + +A +FD L+ G+ N L+D
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 188 CKEEFVEQARQIYLE--LKQHIAPNAHTFNIFIHGWCKIRRVEEA--------------- 230
CK V++A + LE L ++ PN+ TFN IHG C +++EA
Sbjct: 543 CKAGKVDEA-HLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601
Query: 231 --------------------HWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLD 270
+ Q+M G +P +Y+T IQ YC E +++
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMA 661
Query: 271 EMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+M+ SP++ TY+ ++ + + A V++R
Sbjct: 662 KMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR 697
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/216 (18%), Positives = 99/216 (45%), Gaps = 19/216 (8%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
Y ++D + +D+ +L++M + + T ++ G+ +A + + +
Sbjct: 535 YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV 594
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRVE 228
+GL+ + +L+ L K+ + A + + L P+AHT+ FI +C+ R+
Sbjct: 595 KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLL 654
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII- 287
+A + +M+ G P + +YS++I+ Y + + +++L M+ C P+ T+ +
Sbjct: 655 DAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
Query: 288 -----------------MCALAKAEKFDEALQVIER 306
+CA++ +FD ++++E+
Sbjct: 715 KHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEK 750
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/184 (17%), Positives = 79/184 (42%), Gaps = 19/184 (10%)
Query: 141 TLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY 200
T++T ++ R + G + A F + + G + + + + T C+E + A +
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM 660
Query: 201 LELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQ----- 254
+++++ ++P+ T++ I G+ + + A ++ M+ GC P ++ ++I+
Sbjct: 661 AKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEM 720
Query: 255 -------------CYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEAL 301
N F V ELL++M +PN +Y ++ + + A
Sbjct: 721 KYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAE 780
Query: 302 QVIE 305
+V +
Sbjct: 781 KVFD 784
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 100/198 (50%), Gaps = 1/198 (0%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
Y ++D L + + D +L +M +G + T + ++ G+W+DA R+ D+
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVE 228
+ N + + L+D K+ + +A ++Y E+ K+ I PN T++ I+G+C + R+
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
EA ++ M C P V++Y+T+I +C + K EL EM + N VTYT ++
Sbjct: 376 EAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Query: 289 CALAKAEKFDEALQVIER 306
+A D A V ++
Sbjct: 436 HGFFQARDCDNAQMVFKQ 453
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 87/165 (52%), Gaps = 1/165 (0%)
Query: 142 LNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY- 200
L T + ++ FV G+ A ++++++ ++ N + + L++ C + + +A+Q+
Sbjct: 323 LVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE 382
Query: 201 LELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQ 260
L +++ PN T+N I+G+CK +RV++ +EM G ++Y+T+I + +
Sbjct: 383 LMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 442
Query: 261 NFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+ + +M + PN++TY I++ L K K +A+ V E
Sbjct: 443 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFE 487
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 86/178 (48%), Gaps = 1/178 (0%)
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
L+DQM G T ++ + ++AV + D + G + + + +++ LC
Sbjct: 170 LVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLC 229
Query: 189 KEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
K + A + +++ I N ++ I CK R ++A EM+ G RP VI
Sbjct: 230 KRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 289
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+YS++I C CN +S LL +M + +PN+VT++ ++ A K K +A ++ E
Sbjct: 290 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYE 347
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Query: 176 NTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTI 234
N + N L++ CK + V++ +++ E+ Q + N T+ IHG+ + R + A
Sbjct: 392 NVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 451
Query: 235 QEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKA 294
++M G P +++Y+ ++ C +K + + +Q P++ TY I++ + KA
Sbjct: 452 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 511
Query: 295 EK 296
K
Sbjct: 512 GK 513
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 83/178 (46%), Gaps = 1/178 (0%)
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
L+D+M G L T V+ G A+ + + ++ +E N + ++D+LC
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 264
Query: 189 KEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
K + A ++ E++ + + PN T++ I C R +A + +M P ++
Sbjct: 265 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 324
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
++S +I + + K +L +EM + PN+ TY+ ++ ++ EA Q++E
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE 382
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 94/215 (43%), Gaps = 2/215 (0%)
Query: 90 ALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVM 149
A+GLF + F E + ++ + +M D + ++M G L T ++
Sbjct: 62 AIGLFGVMAQSRPFPSIIE-FSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILI 120
Query: 150 RRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIA 208
F + + A+ + + LG E + ++N LL+ C + A + ++ +
Sbjct: 121 NCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYK 180
Query: 209 PNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYEL 268
P+ TF IHG + EA I M GC+P +++Y ++ C + L
Sbjct: 181 PDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNL 240
Query: 269 LDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
L++M+A NVV Y+ ++ +L K D+AL +
Sbjct: 241 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 275
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 83/182 (45%), Gaps = 4/182 (2%)
Query: 126 LRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLD 185
L ++ Q R SII +K++ ++ + + ++ LG+ N + N+L++
Sbjct: 65 LFGVMAQSRPFPSIIEF---SKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILIN 121
Query: 186 TLCK-EEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRP 244
C+ + +K P+ T N ++G+C R+ +A + +M G +P
Sbjct: 122 CFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKP 181
Query: 245 CVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
++++T+I S+ L+D M + C P++VTY ++ L K D AL ++
Sbjct: 182 DTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLL 241
Query: 305 ER 306
+
Sbjct: 242 NK 243
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 100/195 (51%), Gaps = 1/195 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIF-DD 167
+Y+ ++ + +++++ L D+M G + + +M + G+ +A +I +D
Sbjct: 85 TYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHED 144
Query: 168 LQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRV 227
+ GL ++ N+LLD LCK + A +++ LK + P T+NI I+G CK RRV
Sbjct: 145 IHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRV 204
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
W ++E+K G P ++Y+T+++ Y + K +L +M+ + + + +
Sbjct: 205 GSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAV 264
Query: 288 MCALAKAEKFDEALQ 302
+ AL K + +EA +
Sbjct: 265 VSALIKTGRAEEAYE 279
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
Query: 176 NTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTI 234
+T+ +N+ +++LCK +E+A + ++ ++ + P+ T+N I G+ + ++EA+
Sbjct: 12 STKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVT 71
Query: 235 QEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKA 294
+ M+ G P V +Y+++I ++V +L DEM SP++ +Y +M K
Sbjct: 72 RRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKL 131
Query: 295 EKFDEALQVI 304
+ EA +++
Sbjct: 132 GRHGEAFKIL 141
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 95/194 (48%), Gaps = 19/194 (9%)
Query: 108 ESYDMMVDILGRMKVMDKLRDLLDQM--RCEGSIITLNTIAKVM--RRFVGAGQWADAVR 163
++Y++++D L + D +L + R + ++T N + + R VG+ W
Sbjct: 155 DTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRVGSVDW----- 209
Query: 164 IFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIF-----I 218
+ +L+ G N + +L K + +E+ Q++L++K+ +TF+ F +
Sbjct: 210 MMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKE----GYTFDGFANCAVV 265
Query: 219 HGWCKIRRVEEAHWTIQEMKGYGCRPC-VISYSTIIQCYCNEQNFSKVYELLDEMQAQDC 277
K R EEA+ + E+ G R ++SY+T++ Y + N V +LL+E++ +
Sbjct: 266 SALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGL 325
Query: 278 SPNVVTYTIIMCAL 291
P+ T+TII+ L
Sbjct: 326 KPDDYTHTIIVNGL 339
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 81/202 (40%), Gaps = 41/202 (20%)
Query: 139 IITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQ 198
+IT NT+ K RF+G + R ++ G+E + + N L+ K + + Q
Sbjct: 48 VITYNTLIKGYTRFIGIDEAYAVTR---RMREAGIEPDVTTYNSLISGAAKNLMLNRVLQ 104
Query: 199 I----------------------YLELKQH---------------IAPNAHTFNIFIHGW 221
+ Y +L +H + P T+NI +
Sbjct: 105 LFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDAL 164
Query: 222 CKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNV 281
CK + A + +K +P +++Y+ +I C + V ++ E++ +PN
Sbjct: 165 CKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNA 223
Query: 282 VTYTIIMCALAKAEKFDEALQV 303
VTYT ++ K ++ ++ LQ+
Sbjct: 224 VTYTTMLKMYFKTKRIEKGLQL 245
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 96/198 (48%), Gaps = 2/198 (1%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
Y+ ++D L + K MD DL ++M +G + T ++ G+W+DA R+ D+
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL--KQHIAPNAHTFNIFIHGWCKIRRV 227
+ + N L+D KE + +A ++Y E+ +H P+ +N I G+CK +RV
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
EE +EM G ++Y+T+I + ++ + +M + P+++TY I+
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Query: 288 MCALAKAEKFDEALQVIE 305
+ L + AL V E
Sbjct: 433 LDGLCNNGNVETALVVFE 450
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 4/231 (1%)
Query: 79 LLRRYKDDWK--SALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCE 136
L R+ D K A+GLF F E + ++ + +M D + L +QM+
Sbjct: 46 LSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVE-FSKLLSAIAKMNKFDLVISLGEQMQNL 104
Query: 137 GSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQA 196
G L T + + F Q + A+ I + LG + ++N LL+ C + +A
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164
Query: 197 RQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQC 255
+ ++ + P+ TF +HG + + EA ++ M GC+P +++Y +I
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 224
Query: 256 YCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
C LL++M+ +VV Y I+ L K + D+A + +
Sbjct: 225 LCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNK 275
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 100/203 (49%), Gaps = 8/203 (3%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQM---RCEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
+Y +++ L + D +LL++M + E ++ NTI + ++ DA +F
Sbjct: 217 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKY---KHMDDAFDLF 273
Query: 166 DDLQTLGLEKNTESMNLLLDTLCK-EEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKI 224
+ ++T G++ + + N L+ LC + + +R + L+++I P+ FN I + K
Sbjct: 274 NKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKE 333
Query: 225 RRVEEAHWTIQEM-KGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVT 283
++ EA EM K C P V++Y+T+I+ +C + + E+ EM + N VT
Sbjct: 334 GKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 393
Query: 284 YTIIMCALAKAEKFDEALQVIER 306
YT ++ +A D A V ++
Sbjct: 394 YTTLIHGFFQARDCDNAQMVFKQ 416
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
L+DQM G T ++ + ++AV + + + G + + + +++ LC
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 226
Query: 189 KEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
K + A + ++ K I + +N I G CK + +++A +M+ G +P V
Sbjct: 227 KRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 286
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
+Y+ +I C CN +S LL +M ++ +P++V + ++ A K K EA
Sbjct: 287 TYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 84/183 (45%), Gaps = 1/183 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+ ++ + K +++ ++ +M G + T ++ F A +A +F +
Sbjct: 358 AYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 417
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRV 227
+ G+ + + N+LLD LC VE A ++ + K+ + + T+ I CK +V
Sbjct: 418 VSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKV 477
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
E+ + G +P V++Y+T++ +C + + L EM+ PN TY +
Sbjct: 478 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTL 537
Query: 288 MCA 290
+ A
Sbjct: 538 IRA 540
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 76/165 (46%), Gaps = 1/165 (0%)
Query: 124 DKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLL 183
D + + QM +G + T ++ G A+ +F+ +Q ++ + + +
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 184 LDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGC 242
++ LCK VE ++ L + + PN T+ + G+C+ EEA EMK G
Sbjct: 468 IEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGP 527
Query: 243 RPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
P +Y+T+I+ + + + EL+ EM++ + + T+ ++
Sbjct: 528 LPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLV 572
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 120/248 (48%), Gaps = 7/248 (2%)
Query: 63 DQACDAIHLSPNLI--NILLRRYKD--DWKSALGLFKWASLHSNFQHSPESYDMMVDILG 118
D A D + L PN + NIL++ + D DW++A +F L Q S +Y+ ++ L
Sbjct: 175 DGAKD-MRLRPNSVSFNILIKGFLDKCDWEAACKVFD-EMLEMEVQPSVVTYNSLIGFLC 232
Query: 119 RMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTE 178
R M K + LL+ M + T +M+ G++ +A ++ D++ G +
Sbjct: 233 RNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLV 292
Query: 179 SMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEM 237
+ +L+ L K +++A+ + E+K+ I P+ +NI ++ C RV EA+ + EM
Sbjct: 293 NYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEM 352
Query: 238 KGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKF 297
+ GC+P +Y +I +C ++F +L+ M A P T+ ++ L K
Sbjct: 353 QMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNL 412
Query: 298 DEALQVIE 305
D A V+E
Sbjct: 413 DHACFVLE 420
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 94/187 (50%), Gaps = 7/187 (3%)
Query: 118 GRMKVMDKLRDLLDQMR---CEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLE 174
G+ +DK D+ ++ C +I +LNT+ V+ V G+ A FD + + L
Sbjct: 127 GKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVL---VDNGELEKAKSFFDGAKDMRLR 183
Query: 175 KNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWT 233
N+ S N+L+ + E A +++ E L+ + P+ T+N I C+ + +A
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSL 243
Query: 234 IQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAK 293
+++M RP +++ +++ C + +++ +L+ +M+ + C P +V Y I+M L K
Sbjct: 244 LEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGK 303
Query: 294 AEKFDEA 300
+ DEA
Sbjct: 304 RGRIDEA 310
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 100/198 (50%), Gaps = 1/198 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+++ +++ L + M+K ++LD+M G +T K+M+ + G A F L
Sbjct: 626 TFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRL 685
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRV 227
Q GL+ + + LL CK ++ A + E+ ++I N+ +NI I GW + V
Sbjct: 686 QNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDV 745
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
EA IQ+MK G +P + +Y++ I + ++ + ++EM+A PN+ TYT +
Sbjct: 746 WEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTL 805
Query: 288 MCALAKAEKFDEALQVIE 305
+ A+A ++AL E
Sbjct: 806 IKGWARASLPEKALSCYE 823
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 2/222 (0%)
Query: 86 DWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTI 145
D K L +FK F + +Y ++++ ++ + K ++ M+ EG L T
Sbjct: 464 DEKKGLVVFKRLK-ECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTY 522
Query: 146 AKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ 205
+ ++ FV WA+A +F+D+ G++ + N ++ C +++A Q E+++
Sbjct: 523 SMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQK 582
Query: 206 -HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSK 264
P TF IHG+ K + + M+ GC P V +++ +I ++ K
Sbjct: 583 LRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEK 642
Query: 265 VYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
E+LDEM S N TYT IM A +A + R
Sbjct: 643 AVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTR 684
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 93/203 (45%), Gaps = 1/203 (0%)
Query: 104 QHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVR 163
+H+ ++Y MM++ ++K + + M EG + ++ F G G A++
Sbjct: 516 KHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQ 575
Query: 164 IFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWC 222
++Q L T + ++ K + ++ +++ +++ P HTFN I+G
Sbjct: 576 TVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLV 635
Query: 223 KIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVV 282
+ R++E+A + EM G +Y+ I+Q Y + + K +E +Q + ++
Sbjct: 636 EKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF 695
Query: 283 TYTIIMCALAKAEKFDEALQVIE 305
TY ++ A K+ + AL V +
Sbjct: 696 TYEALLKACCKSGRMQSALAVTK 718
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 94/220 (42%), Gaps = 6/220 (2%)
Query: 85 DDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNT 144
D+W++ + F+ S S + + +MV GR M + R+ ++MR G T
Sbjct: 292 DNWQAVISAFEKISKPSRTE-----FGLMVKFYGRRGDMHRARETFERMRARGITPTSRI 346
Query: 145 IAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK 204
++ + +A+ ++ G+E + + ++++ K E A + E K
Sbjct: 347 YTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAK 406
Query: 205 Q-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFS 263
+ H NA + I+ C+ +E A ++EM+ G + Y T++ Y +
Sbjct: 407 RIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEK 466
Query: 264 KVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
K + ++ +P VVTY ++ K K +AL+V
Sbjct: 467 KGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEV 506
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 98/199 (49%), Gaps = 5/199 (2%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCE--GSIITLNTIAKVMRRFVGAGQWADAVRIFDD 167
Y M+D G V D+ + L+ R + G T+ T ++ + G+ + A+ +
Sbjct: 452 YHTMMD--GYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRV 509
Query: 168 LQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRR 226
++ G++ N ++ +++++ K + A ++ ++ K+ + P+ +N I +C +
Sbjct: 510 MKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGN 569
Query: 227 VEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTI 286
++ A T++EM+ RP ++ II Y + + E+ D M+ C P V T+
Sbjct: 570 MDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNG 629
Query: 287 IMCALAKAEKFDEALQVIE 305
++ L + + ++A+++++
Sbjct: 630 LINGLVEKRQMEKAVEILD 648
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 80/184 (43%), Gaps = 1/184 (0%)
Query: 123 MDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNL 182
M++ L+ +M EG + +M + + +F L+ G +
Sbjct: 430 MERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGC 489
Query: 183 LLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYG 241
L++ K + +A ++ +K+ + N T+++ I+G+ K++ A ++M G
Sbjct: 490 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 549
Query: 242 CRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEAL 301
+P VI Y+ II +C N + + + EMQ P T+ I+ AK+ +L
Sbjct: 550 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL 609
Query: 302 QVIE 305
+V +
Sbjct: 610 EVFD 613
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 96/197 (48%), Gaps = 2/197 (1%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
++++++ L R + +L+ M G + T VM+ ++ G A+RI + +
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM 250
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH--IAPNAHTFNIFIHGWCKIRR 226
G + S+N+++ CKE VE A E+ P+ +TFN ++G CK
Sbjct: 251 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH 310
Query: 227 VEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTI 286
V+ A + M G P V +Y+++I C + E+LD+M +DCSPN VTY
Sbjct: 311 VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNT 370
Query: 287 IMCALAKAEKFDEALQV 303
++ L K + +EA ++
Sbjct: 371 LISTLCKENQVEEATEL 387
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 1/219 (0%)
Query: 88 KSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAK 147
+ AL + S F +++ +V+ L + + +++D M EG + T
Sbjct: 276 EDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNS 335
Query: 148 VMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQH 206
V+ G+ +AV + D + T NT + N L+ TLCKE VE+A ++ L +
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
Query: 207 IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVY 266
I P+ TFN I G C R A +EM+ GC P +Y+ +I C++ +
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455
Query: 267 ELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+L +M+ C+ +V+TY ++ KA K EA ++ +
Sbjct: 456 NMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFD 494
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEG---SIITLNTIAKVMRRFVGAGQWADAVRIF 165
+Y+M++D L +D+ ++L QM G S+IT NT+ + F A + +A IF
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL---IDGFCKANKTREAEEIF 493
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKI 224
D+++ G+ +N+ + N L+D LCK VE A Q+ ++ + P+ +T+N + +C+
Sbjct: 494 DEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRG 553
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
+++A +Q M GC P +++Y T+I C +LL +Q + + Y
Sbjct: 554 GDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAY 613
Query: 285 TIIMCALAKAEKFDEALQVI 304
++ L + K EA+ +
Sbjct: 614 NPVIQGLFRKRKTTEAINLF 633
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 94/178 (52%), Gaps = 1/178 (0%)
Query: 128 DLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTL 187
+L ++MR +G T ++ G+ +A+ + ++ G ++ + N L+D
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480
Query: 188 CKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCV 246
CK +A +I+ E++ H ++ N+ T+N I G CK RRVE+A + +M G +P
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540
Query: 247 ISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+Y++++ +C + K +++ M + C P++VTY ++ L KA + + A +++
Sbjct: 541 YTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL 598
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 88/167 (52%), Gaps = 4/167 (2%)
Query: 141 TLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY 200
T NT+ + + AG A+ I D + G + + + N ++ LCK V++A ++
Sbjct: 297 TFNTLVNGLCK---AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVL 353
Query: 201 LEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNE 259
++ + +PN T+N I CK +VEEA + + G P V +++++IQ C
Sbjct: 354 DQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLT 413
Query: 260 QNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+N EL +EM+++ C P+ TY +++ +L K DEAL ++++
Sbjct: 414 RNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 460
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 106/232 (45%), Gaps = 11/232 (4%)
Query: 80 LRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQM---RCE 136
LR DD +AL LF AS NF P Y+ ++ LGR D ++ +L+ M RCE
Sbjct: 57 LRSQPDD-SAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCE 115
Query: 137 GSIITLNTIAKVMRRFVGAGQWADAVRIFDD--LQTLGLEKNTESMNLLLDTLCKEEFVE 194
T + + +F + D + D + GL+ +T N +L+ L ++
Sbjct: 116 MGTSTFLILIESYAQF----ELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLK 171
Query: 195 QARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTII 253
+ ++ I P+ TFN+ I C+ ++ A +++M YG P +++T++
Sbjct: 172 LVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVM 231
Query: 254 QCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
Q Y E + + ++M CS + V+ +I+ K + ++AL I+
Sbjct: 232 QGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQ 283
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 76/146 (52%), Gaps = 1/146 (0%)
Query: 161 AVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIH 219
A+ +F+++++ G E + + N+L+D+LC + +++A + +++ A + T+N I
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478
Query: 220 GWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSP 279
G+CK + EA EM+ +G ++Y+T+I C + +L+D+M + P
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538
Query: 280 NVVTYTIIMCALAKAEKFDEALQVIE 305
+ TY ++ + +A +++
Sbjct: 539 DKYTYNSLLTHFCRGGDIKKAADIVQ 564
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 107/220 (48%), Gaps = 2/220 (0%)
Query: 89 SALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKV 148
+++ LF W + ++HS + Y +++ LG + LL QM+ EG + + +
Sbjct: 93 TSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISI 152
Query: 149 MRRFVGAGQWADAVRIFDDLQTL-GLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQH 206
MR + AG R+ +++ + E +S N++L+ L + A ++ + L +
Sbjct: 153 MRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRK 212
Query: 207 IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVY 266
I P TF + + +C + ++ A +++M +GC P + Y T+I ++
Sbjct: 213 IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL 272
Query: 267 ELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+LL+EM C P+ T+ ++ L K ++ +EA +++ R
Sbjct: 273 QLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNR 312
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 101/195 (51%), Gaps = 6/195 (3%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y +++ L ++ +D +DL ++ + I+ NT+ + FV G+ DA + D+
Sbjct: 324 TYGYLMNGLCKIGRVDAAKDLFYRIP-KPEIVIFNTL---IHGFVTHGRLDDAKAVLSDM 379
Query: 169 QT-LGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRR 226
T G+ + + N L+ KE V A ++ +++ + PN +++ I + G+CK+ +
Sbjct: 380 VTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGK 439
Query: 227 VEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTI 286
++EA+ + EM G +P + ++ +I +C E + E+ EM + C P+V T+
Sbjct: 440 IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 499
Query: 287 IMCALAKAEKFDEAL 301
++ L + ++ AL
Sbjct: 500 LISGLCEVDEIKHAL 514
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 93/180 (51%), Gaps = 1/180 (0%)
Query: 128 DLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTL 187
++L MR +G + + ++ F G+ +A + +++ GL+ NT N L+
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 188 CKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCV 246
CKE + +A +I+ E+ ++ P+ +TFN I G C++ ++ A W +++M G
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529
Query: 247 ISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
++Y+T+I + + +L++EM Q + +TY ++ L +A + D+A + E+
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEK 589
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 94/191 (49%), Gaps = 1/191 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+ +++ R + + R L+++M +GS + T +++ AG+ A +F+ +
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRV 227
G + S N+L++ LC+ VE+A + E+ + P+ TFN I+G C+ R+
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
E+ ++++ G P ++++T++ C LLDE PN T++I+
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSIL 710
Query: 288 MCALAKAEKFD 298
+ ++ E D
Sbjct: 711 LQSIIPQETLD 721
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 83/167 (49%), Gaps = 1/167 (0%)
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
LL M EG + T ++ F+ G+ +A ++ +++ G + + N L+ LC
Sbjct: 516 LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLC 575
Query: 189 KEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
+ V++AR ++ + L+ AP+ + NI I+G C+ VEEA +EM G P ++
Sbjct: 576 RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 635
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKA 294
+++++I C + ++QA+ P+ VT+ +M L K
Sbjct: 636 TFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKG 682
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 73/147 (49%), Gaps = 1/147 (0%)
Query: 161 AVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAP-NAHTFNIFIH 219
A+ + D+ + G+ NT + N L++ + +++AR++ E+ +P + T+N I
Sbjct: 513 ALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIK 572
Query: 220 GWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSP 279
G C+ V++A ++M G P IS + +I C + E EM + +P
Sbjct: 573 GLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTP 632
Query: 280 NVVTYTIIMCALAKAEKFDEALQVIER 306
++VT+ ++ L +A + ++ L + +
Sbjct: 633 DIVTFNSLINGLCRAGRIEDGLTMFRK 659
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 95/187 (50%), Gaps = 8/187 (4%)
Query: 128 DLLD-------QMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESM 180
DLLD +M G ++ ++ R AG++ A + ++ G +T +
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 181 NLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKG 239
+ +L+ LC +E A ++ E+K+ + + +T+ I + +CK +E+A EM+
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 240 YGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDE 299
GC P V++Y+ +I Y + S EL + M ++ C PN+VTY+ ++ KA + ++
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606
Query: 300 ALQVIER 306
A Q+ ER
Sbjct: 607 ACQIFER 613
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 84/164 (51%), Gaps = 1/164 (0%)
Query: 144 TIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL 203
T ++ F + + +A ++ D + G E N + L+D LCK +++A+++ E+
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700
Query: 204 KQHIAP-NAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNF 262
+H P +T++ I + K++R + A + +M C P V+ Y+ +I C
Sbjct: 701 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 760
Query: 263 SKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+ Y+L+ M+ + C PNVVTYT ++ K + L+++ER
Sbjct: 761 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLER 804
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 104/249 (41%), Gaps = 52/249 (20%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y +MVD + ++++ R ++MR G + T ++ ++ A + + A +F+ +
Sbjct: 520 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM 579
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIY-------------LELKQHI----APNA 211
+ G N + + L+D CK VE+A QI+ + KQ+ PN
Sbjct: 580 LSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNV 639
Query: 212 HTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYC-------------- 257
T+ + G+CK RVEEA + M GC P I Y +I C
Sbjct: 640 VTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTE 699
Query: 258 -NEQNFSKVY--------------------ELLDEMQAQDCSPNVVTYTIIMCALAKAEK 296
+E F ++L +M C+PNVV YT ++ L K K
Sbjct: 700 MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 759
Query: 297 FDEALQVIE 305
DEA ++++
Sbjct: 760 TDEAYKLMQ 768
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 93/203 (45%), Gaps = 4/203 (1%)
Query: 89 SALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKV 148
+ + F WA ++H+ Y+ +VD++ R + L Q+R + + + +
Sbjct: 147 AVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVL 206
Query: 149 MRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHI 207
+R+ G ++ A+ L+ + + N L+ K + ++ A I+ E+ ++
Sbjct: 207 VRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANL 266
Query: 208 APNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYE 267
+ T F + CK+ + EA T+ E + + P + Y+ +I C F + +
Sbjct: 267 RMDGFTLRCFAYSLCKVGKWREA-LTLVETENF--VPDTVFYTKLISGLCEASLFEEAMD 323
Query: 268 LLDEMQAQDCSPNVVTYTIIMCA 290
L+ M+A C PNVVTY+ ++C
Sbjct: 324 FLNRMRATSCLPNVVTYSTLLCG 346
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 1/198 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y ++D + +++ R LLD M EG ++ G+ +A + ++
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRV 227
G + + L+D K + + A ++ + L+ APN + I G CK+ +
Sbjct: 701 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 760
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
+EA+ +Q M+ GC+P V++Y+ +I + ELL+ M ++ +PN VTY ++
Sbjct: 761 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820
Query: 288 MCALAKAEKFDEALQVIE 305
+ K D A ++E
Sbjct: 821 IDHCCKNGALDVAHNLLE 838
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 81/187 (43%), Gaps = 7/187 (3%)
Query: 121 KVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESM 180
K + + + +L+ M EG + ++ + +G + A ++ + G
Sbjct: 351 KQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVY 410
Query: 181 NLLLDTLCKE------EFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWT 233
N+L+ ++C + + ++ A + Y E L + N + F C + E+A
Sbjct: 411 NILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSV 470
Query: 234 IQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAK 293
I+EM G G P +YS ++ CN + L +EM+ +V TYTI++ + K
Sbjct: 471 IREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCK 530
Query: 294 AEKFDEA 300
A ++A
Sbjct: 531 AGLIEQA 537
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 97/230 (42%), Gaps = 34/230 (14%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
YD ++D L ++ +D+ +++ +M G TL T + ++ R+ + A ++ +
Sbjct: 677 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVE 228
N ++D LCK ++A ++ +++ PN T+ I G+ I ++E
Sbjct: 737 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 796
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYC----------------------NEQNFSKVY 266
++ M G P ++Y +I C + + KV
Sbjct: 797 TCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVI 856
Query: 267 E-----------LLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
E LLDE+ D +P + Y +++ L KA++ + AL+++E
Sbjct: 857 EGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLE 906
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 117/247 (47%), Gaps = 13/247 (5%)
Query: 70 HLSPN--LINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLR 127
H++PN LI L + ++ALG +W +SNF H+ E+ VD GR K +
Sbjct: 104 HITPNPDLILQTLNLSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGML 163
Query: 128 DLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQT-LGLEKNTESMNLLLDT 186
+++ + + I T+ + R V AG+ F+ ++ GL+++ ES+ L++
Sbjct: 164 EIISKYK---GIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKK 220
Query: 187 LCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCV 246
LC++ A ++ I P+ + ++ I GWC +++EA EM G
Sbjct: 221 LCEKGHASIAEKMVKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGT 280
Query: 247 ISYSTIIQCYC----NEQNF---SKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDE 299
+Y+ ++ C C + F +V ++L EM+ + N T+ +++ L K + +E
Sbjct: 281 KAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEE 340
Query: 300 ALQVIER 306
A+ + R
Sbjct: 341 AMTLFGR 347
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 155 AGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCK-----EEFVEQAR--QIYLELKQHI 207
A + +A R+ ++ G E T++ N++LD +CK + F Q ++ LE++
Sbjct: 258 AEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRG 317
Query: 208 AP-NAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVY 266
P N TFN+ I+ CKIRR EEA M +GC+P +Y +I+ +
Sbjct: 318 VPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGD 377
Query: 267 ELLDEMQAQDCSP--NVVTYTIIMCALAKAEKFDEALQVIE 305
E++D+M++ N Y + L E+ + A+ V +
Sbjct: 378 EMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFK 418
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 101/198 (51%), Gaps = 1/198 (0%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
Y ++D L K ++ +L +M +G + T ++R G+W+DA R+ D+
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVE 228
+ N + + L+D KE + +A ++Y E+ K+ I P+ T++ I+G+C R++
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
EA + M C P V++Y+T+I+ +C + + EL EM + N VTY ++
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 289 CALAKAEKFDEALQVIER 306
L +A D A ++ ++
Sbjct: 438 QGLFQAGDCDMAQKIFKK 455
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 88/163 (53%), Gaps = 1/163 (0%)
Query: 144 TIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY-LE 202
T + ++ FV G+ +A +++D++ ++ + + + L++ C + +++A+ ++ L
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 203 LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNF 262
+ + PN T+N I G+CK +RVEE +EM G ++Y+T+IQ +
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446
Query: 263 SKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
++ +M + P+++TY+I++ L K K ++AL V E
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 489
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 93/190 (48%), Gaps = 2/190 (1%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+ ++ + K +++ +L +M G + T +++ AG A +IF +
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRV 227
+ G+ + + ++LLD LCK +E+A ++ L K + P+ +T+NI I G CK +V
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 516
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY-TI 286
E+ + G +P VI Y+T+I +C + + L EM+ PN TY T+
Sbjct: 517 EDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTL 576
Query: 287 IMCALAKAEK 296
I L +K
Sbjct: 577 IRARLRDGDK 586
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 1/148 (0%)
Query: 157 QWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFN 215
Q A+ + + LG E + +++ LL+ C + + +A + ++ PN TFN
Sbjct: 130 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFN 189
Query: 216 IFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQ 275
IHG + EA I M GC+P + +Y T++ C + LL +M+
Sbjct: 190 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG 249
Query: 276 DCSPNVVTYTIIMCALAKAEKFDEALQV 303
+VV YT I+ AL + ++AL +
Sbjct: 250 KIEADVVIYTTIIDALCNYKNVNDALNL 277
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 81/167 (48%), Gaps = 4/167 (2%)
Query: 135 CEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVE 194
C +++T NT+ K F A + + + +F ++ GL NT + N L+ L + +
Sbjct: 391 CFPNVVTYNTLIK---GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 195 QARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTII 253
A++I+ ++ + P+ T++I + G CK ++E+A + ++ P + +Y+ +I
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 254 QCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
+ C ++L + + PNV+ YT ++ + +EA
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 99/209 (47%), Gaps = 12/209 (5%)
Query: 106 SPESYDMMVDILGRMKVMD-KLRDLLD------QMRCEGSIITLNTIAKVMRRFVGAGQW 158
S SYD + L R ++D KL D +D Q R SI+ N K++ ++
Sbjct: 41 SAASYDYR-EKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFN---KLLSAIAKMNKF 96
Query: 159 ADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIF 217
+ + + +Q L + + S N+L++ C+ + A + ++ K P+ T +
Sbjct: 97 DLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSL 156
Query: 218 IHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDC 277
++G+C +R+ EA + +M +P ++++T+I S+ L+D M A+ C
Sbjct: 157 LNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGC 216
Query: 278 SPNVVTYTIIMCALAKAEKFDEALQVIER 306
P++ TY ++ L K D AL ++++
Sbjct: 217 QPDLFTYGTVVNGLCKRGDIDLALSLLKK 245
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+ ++ L + D + + +M +G + T + ++ G+ A+ +F+ L
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRV 227
Q +E + + N++++ +CK VE ++ L + + PN + I G+C+
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 551
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQA 274
EEA +EMK G P +Y+T+I+ + + + EL+ EM++
Sbjct: 552 EEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRS 598
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 118/239 (49%), Gaps = 4/239 (1%)
Query: 71 LSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLL 130
L+PN + + KD L ++ S ++Q + Y +M++ G+ K+ D++ +++
Sbjct: 60 LAPNEVLKIFDNVKDP-SFLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVM 118
Query: 131 DQMRCEGSIITLNTIAKVMRRFVG--AGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
++ E + R G AG+ A+ I + G +++S N +L+ L
Sbjct: 119 RTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLV 178
Query: 189 KEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
+ ++ +I++ K + +A NI I G C+ +E A + E RP V+
Sbjct: 179 SAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVM 238
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
++S +I+ +CN+ F + ++LL+ M+ + P+ +T+ I++ L K + +E + ++ER
Sbjct: 239 TFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLER 297
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 83/167 (49%), Gaps = 2/167 (1%)
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
LLD+ + S + T + ++R F G++ +A ++ + ++ +E +T + N+L+ L
Sbjct: 224 LLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLR 283
Query: 189 KEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
K+ VE+ + +K + PN T+ ++G +R EA + +M +G RP +
Sbjct: 284 KKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFL 343
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVT-YTIIMCALAK 293
SY ++ C ++ ++ +L +M P + + ++ C ++K
Sbjct: 344 SYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSK 390
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 88/187 (47%), Gaps = 1/187 (0%)
Query: 106 SPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
S +S++ ++++L K+ D++ + G I + +++ +G A+++
Sbjct: 166 SSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLL 225
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKI 224
D+ N + + L+ C + E+A ++ + K+ I P+ TFNI I G K
Sbjct: 226 DEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKK 285
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
RVEE ++ MK GC P +Y ++ +++ + E++ +M + P+ ++Y
Sbjct: 286 GRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSY 345
Query: 285 TIIMCAL 291
++ L
Sbjct: 346 KKMVLGL 352
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 1/198 (0%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
Y ++D L + + +D +L +M +G + T + ++ G+W+DA R+ D+
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVE 228
+ N + N L+D KE + +A +++ E+ Q I PN T+N I+G+C R++
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
EA M C P V++Y+T+I +C + EL +M + N VTYT ++
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Query: 289 CALAKAEKFDEALQVIER 306
+A D A V ++
Sbjct: 423 HGFFQASDCDNAQMVFKQ 440
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 128/268 (47%), Gaps = 25/268 (9%)
Query: 43 LTSKVAKGSSEEEI-IRSLCNDQACDAIHLSPNLINILLRRYKDDWKSALGLFKWASLHS 101
L +K+ KG E ++ I S D C H+ + +N+ D+ +F ++SL S
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVD-DALNLFTEM--DNKGIRPDVFTYSSLIS 283
Query: 102 ---NFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQW 158
N+ ++ ++ D+L R + +++T N++ + F G+
Sbjct: 284 CLCNYGRWSDASRLLSDMLER--------------KINPNVVTFNSL---IDAFAKEGKL 326
Query: 159 ADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY-LELKQHIAPNAHTFNIF 217
+A ++FD++ ++ N + N L++ C + +++A+QI+ L + + P+ T+N
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386
Query: 218 IHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDC 277
I+G+CK ++V + ++M G ++Y+T+I + + + +M +
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446
Query: 278 SPNVVTYTIIMCALAKAEKFDEALQVIE 305
PN++TY ++ L K K ++A+ V E
Sbjct: 447 HPNIMTYNTLLDGLCKNGKLEKAMVVFE 474
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 86/178 (48%), Gaps = 3/178 (1%)
Query: 121 KVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESM 180
KV+D + +L M G + T ++ F A +A +F + + G+ N +
Sbjct: 395 KVVDGM-ELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 181 NLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKG 239
N LLD LCK +E+A ++ L K + P+ +T+NI G CK +VE+ +
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513
Query: 240 YGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY-TIIMCALAKAEK 296
G +P VI+Y+T+I +C + + Y L +M+ P+ TY T+I L +K
Sbjct: 514 KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDK 571
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 1/178 (0%)
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
L+DQM G T ++ + ++AV + + + G + + + +++ LC
Sbjct: 157 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 216
Query: 189 KEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
K + A + ++ K I + ++ I CK R V++A EM G RP V
Sbjct: 217 KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+YS++I C CN +S LL +M + +PNVVT+ ++ A AK K EA ++ +
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 89/185 (48%), Gaps = 1/185 (0%)
Query: 123 MDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNL 182
+D+ DL +M ++ +K++ ++ + + ++ LG+ N + N+
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 183 LLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYG 241
+++ LC+ + A I ++ K P+ T N ++G+C R+ EA + +M G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 242 CRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEAL 301
+P ++++T++ S+ L++ M + C P++VTY ++ L K + D AL
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 302 QVIER 306
++ +
Sbjct: 226 NLLNK 230
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 84/168 (50%), Gaps = 7/168 (4%)
Query: 124 DKLRDLLDQMRCEG---SIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESM 180
D + + QM +G +I+T NT+ + G+ A+ +F+ LQ +E + +
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTL---LDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTY 488
Query: 181 NLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKG 239
N++ + +CK VE ++ L + + P+ +N I G+CK EEA+ +MK
Sbjct: 489 NIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE 548
Query: 240 YGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
G P +Y+T+I+ + + + + EL+ EM++ + + TY ++
Sbjct: 549 DGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 596
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 74/167 (44%), Gaps = 4/167 (2%)
Query: 135 CEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVE 194
C ++T NT+ + F A + D + +F D+ GL NT + L+ + +
Sbjct: 376 CLPDVVTYNTL---INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432
Query: 195 QARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTII 253
A+ ++ ++ + PN T+N + G CK ++E+A + ++ P + +Y+ +
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMS 492
Query: 254 QCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
+ C ++L + + P+V+ Y ++ K +EA
Sbjct: 493 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA 539
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 140/283 (49%), Gaps = 19/283 (6%)
Query: 36 LMRSVDILTSKVAKGSSEEE----IIRSLCNDQACDAIHLSPNLINILLRRYK--DDWKS 89
L ++ IL VA + ++E + +SL + D + + ++ +++++ Y
Sbjct: 95 LYKTAQILAEDVAAKTLDDEYASLVFKSL--QETYDLCYSTSSVFDLVVKSYSRLSLIDK 152
Query: 90 ALGLFKWASLHSNFQHSPESYDMMVDILGRMK-----VMDKLRDLLDQMRCEGSIITLNT 144
AL + A H F SY+ ++D R K + +++L+ + ++ T N
Sbjct: 153 ALSIVHLAQAHG-FMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES-QVSPNVFTYNI 210
Query: 145 IAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK 204
+ +R F AG A+ +FD ++T G N + N L+D CK ++ ++ +
Sbjct: 211 L---IRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMA 267
Query: 205 -QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFS 263
+ + PN ++N+ I+G C+ R++E + + EM G ++Y+T+I+ YC E NF
Sbjct: 268 LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH 327
Query: 264 KVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+ + EM +P+V+TYT ++ ++ KA + A++ +++
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 103/197 (52%), Gaps = 1/197 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y +VD + M++ +L +M G ++ T ++ G+ DA+ + +D+
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRV 227
+ GL + S + +L C+ V++A ++ E+ ++ I P+ T++ I G+C+ RR
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
+EA +EM G P +Y+ +I YC E + K +L +EM + P+VVTY+++
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 561
Query: 288 MCALAKAEKFDEALQVI 304
+ L K + EA +++
Sbjct: 562 INGLNKQSRTREAKRLL 578
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 124/257 (48%), Gaps = 19/257 (7%)
Query: 63 DQACDAIHLS------PNLI--NILLR---RYKDDWKSALGLFKWASLHSNFQHSPESYD 111
D+A +HL+ P ++ N +L R K + A +FK L S + +Y+
Sbjct: 151 DKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM-LESQVSPNVFTYN 209
Query: 112 MMVD---ILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+++ G + V L D ++ C +++T NT+ + + + D ++ +
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTL---IDGYCKLRKIDDGFKLLRSM 266
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRV 227
GLE N S N++++ LC+E +++ + E+ ++ + + T+N I G+CK
Sbjct: 267 ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNF 326
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
+A EM +G P VI+Y+++I C N ++ E LD+M+ + PN TYT +
Sbjct: 327 HQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTL 386
Query: 288 MCALAKAEKFDEALQVI 304
+ ++ +EA +V+
Sbjct: 387 VDGFSQKGYMNEAYRVL 403
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 101/196 (51%), Gaps = 1/196 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
SY+++++ L R M ++ +L +M G + T +++ + G + A+ + ++
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRV 227
GL + + L+ ++CK + +A + +++ + + PN T+ + G+ + +
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
EA+ ++EM G P V++Y+ +I +C +L++M+ + SP+VV+Y+ +
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Query: 288 MCALAKAEKFDEALQV 303
+ ++ DEAL+V
Sbjct: 457 LSGFCRSYDVDEALRV 472
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 85/169 (50%), Gaps = 4/169 (2%)
Query: 138 SIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQAR 197
S+IT ++ M + AG A+ D ++ GL N + L+D ++ ++ +A
Sbjct: 344 SVITYTSLIHSMCK---AGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400
Query: 198 QIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCY 256
++ E+ + +P+ T+N I+G C ++E+A +++MK G P V+SYST++ +
Sbjct: 401 RVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGF 460
Query: 257 CNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
C + + + EM + P+ +TY+ ++ + + EA + E
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE 509
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 113/243 (46%), Gaps = 12/243 (4%)
Query: 71 LSPNLI--NILLRRY--KDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKL 126
+SPN+ NIL+R + + AL LF + +Y+ ++D +++ +D
Sbjct: 201 VSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVV-TYNTLIDGYCKLRKIDDG 259
Query: 127 RDLLDQMRCEG---SIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLL 183
LL M +G ++I+ N + + R G+ + + ++ G + + N L
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCR---EGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 184 LDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGC 242
+ CKE QA ++ E+ +H + P+ T+ IH CK + A + +M+ G
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 243 RPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQ 302
P +Y+T++ + + ++ Y +L EM SP+VVTY ++ K ++A+
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 303 VIE 305
V+E
Sbjct: 437 VLE 439
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 91/149 (61%), Gaps = 2/149 (1%)
Query: 160 DAVRIFDDLQTL-GLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIF 217
+AV +F+D+ + G+ + + N++++ C+ VE+A++I +K++ PN + ++
Sbjct: 250 EAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSAL 309
Query: 218 IHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDC 277
++G+CK+ +++EA T E+K G + + Y+T++ C+C + +LL EM+A C
Sbjct: 310 MNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRC 369
Query: 278 SPNVVTYTIIMCALAKAEKFDEALQVIER 306
+ +TY +I+ L+ + +EALQ++++
Sbjct: 370 RADTLTYNVILRGLSSEGRSEEALQMLDQ 398
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 114/232 (49%), Gaps = 6/232 (2%)
Query: 79 LLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGS 138
L++R +D + L +F AS F H+ +Y +++D L R K + +L QM+ E
Sbjct: 62 LMKRERDP-QGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETC 120
Query: 139 IITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLG-LEKNTESMNLLLDTLCKEEFVEQAR 197
+ +MR F + + +F+ +Q + ++ + +++ L+ L V +R
Sbjct: 121 RFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSR 180
Query: 198 QIYLELKQHIA--PNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCR-PCVISYSTIIQ 254
++ L K ++ PN FNI + CK + A ++EMK G P I+YST++
Sbjct: 181 KLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMD 240
Query: 255 CYCNEQNFSKVYELLDEMQAQD-CSPNVVTYTIIMCALAKAEKFDEALQVIE 305
C + EL ++M +++ SP+ VT+ +++ +A + + A ++++
Sbjct: 241 CLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILD 292
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 96/218 (44%), Gaps = 1/218 (0%)
Query: 88 KSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAK 147
K A+ LF+ P ++++M++ R +++ + +LD M+ G + +
Sbjct: 249 KEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSA 308
Query: 148 VMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QH 206
+M F G+ +A + FD+++ GL+ +T L++ C+ ++A ++ E+K
Sbjct: 309 LMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASR 368
Query: 207 IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVY 266
+ T+N+ + G R EEA + + G SY I+ C K
Sbjct: 369 CRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAV 428
Query: 267 ELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+ L M + P+ T+ ++ L ++ + ++V+
Sbjct: 429 KFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVL 466
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 128/278 (46%), Gaps = 42/278 (15%)
Query: 69 IHLSPNLINILLR----RYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMD 124
I LSPN ++ +L+ R K D A F W+ + H+ E Y +VD+L K +D
Sbjct: 112 IKLSPNFVSFVLKSDEIREKPDI--AWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVD 169
Query: 125 KLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLL 184
++R + +++ +T++ +++ F G + + ++ ++ G+E + N L+
Sbjct: 170 RIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLM 229
Query: 185 DTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCR 243
+ L FV+ A +++ ++ I P+ T+N I G+CK + ++A +++M+ G
Sbjct: 230 NGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHE 289
Query: 244 PCVISYSTIIQ-CY----------------------------------CNEQNFSKVYEL 268
I+Y T+IQ CY C E ++ Y +
Sbjct: 290 ADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTV 349
Query: 269 LDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+ M + PNV YT+++ AK+ ++A++++ R
Sbjct: 350 FENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHR 387
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 101/214 (47%), Gaps = 8/214 (3%)
Query: 93 LFKWASLHSN-FQHSPESYDMMVDILGRMKVMD---KLRDLLDQMRCEGSIITLNTIAKV 148
L+ W + N + + +Y+ +++ L +D ++ ++++ R + I+T NT+
Sbjct: 207 LWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTM--- 263
Query: 149 MRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHI 207
++ + AGQ A+ D++T G E + + ++ + +Y E+ ++ I
Sbjct: 264 IKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGI 323
Query: 208 APNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYE 267
H F++ I G CK ++ E + + M G +P V Y+ +I Y +
Sbjct: 324 QVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIR 383
Query: 268 LLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEAL 301
LL M + P+VVTY++++ L K + +EAL
Sbjct: 384 LLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEAL 417
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 83/186 (44%), Gaps = 5/186 (2%)
Query: 121 KVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESM 180
K M+KLRD M G T +++ + V ++ ++ G++ +
Sbjct: 275 KAMEKLRD----METRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAF 330
Query: 181 NLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKG 239
+L++ LCKE + + ++ + ++ PN + + I G+ K VE+A + M
Sbjct: 331 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID 390
Query: 240 YGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDE 299
G +P V++YS ++ C + + + + N + Y+ ++ L KA + DE
Sbjct: 391 EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDE 450
Query: 300 ALQVIE 305
A ++ E
Sbjct: 451 AERLFE 456
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 80/179 (44%), Gaps = 1/179 (0%)
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
L +M +G + + + V+ G+ + +F+++ G + N +L+D
Sbjct: 314 LYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYA 373
Query: 189 KEEFVEQA-RQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
K VE A R ++ + + P+ T+++ ++G CK RVEEA + G +
Sbjct: 374 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSM 433
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
YS++I + L +EM + C+ + Y ++ A K K DEA+ + +R
Sbjct: 434 FYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKR 492
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 112/243 (46%), Gaps = 42/243 (17%)
Query: 102 NFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEG---SIITLNTIAKVMRRFVGAGQW 158
N + +Y ++D L R +D L +M +G S++T N++ +R AG+W
Sbjct: 223 NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSL---VRGLCKAGKW 279
Query: 159 ADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIF 217
D + D+ + + N + N+LLD KE +++A ++Y E+ + I+PN T+N
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 339
Query: 218 IHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQ----------NFSK--- 264
+ G+C R+ EA+ + M C P +++++++I+ YC + N SK
Sbjct: 340 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 399
Query: 265 ----------------------VYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQ 302
EL EM + P+V+TY I++ L K ++AL+
Sbjct: 400 VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALE 459
Query: 303 VIE 305
+ E
Sbjct: 460 IFE 462
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 96/180 (53%), Gaps = 7/180 (3%)
Query: 128 DLLDQM---RCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLL 184
DLL +M + + T +TI + R G A+ +F +++T G++ + + N L+
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCR---DGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 185 DTLCKE-EFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCR 243
LCK ++ + A + + + I PN TFN+ + + K +++EA+ +EM G
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 244 PCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
P +I+Y+T++ YC + S+ +LD M CSP++VT+T ++ ++ D+ ++V
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 86/200 (43%), Gaps = 41/200 (20%)
Query: 138 SIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQAR 197
++IT N + V FV G+ +A ++ ++ T G+ N + N L+D C + + +A
Sbjct: 297 NVITFNVLLDV---FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 198 QIYLEL-------------------------------------KQHIAPNAHTFNIFIHG 220
+ L+L K+ + NA T++I + G
Sbjct: 354 NM-LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 412
Query: 221 WCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPN 280
+C+ +++ A QEM +G P V++Y ++ C+ K E+ +++Q
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472
Query: 281 VVTYTIIMCALAKAEKFDEA 300
+V YT I+ + K K ++A
Sbjct: 473 IVMYTTIIEGMCKGGKVEDA 492
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 91/181 (50%), Gaps = 7/181 (3%)
Query: 129 LLDQM---RCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLD 185
L+D+M C+ ++T N+I + R +G + A+ + ++ ++ + + + ++D
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICR---SGDTSLALDLLRKMEERNVKADVFTYSTIID 236
Query: 186 TLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRP 244
+LC++ ++ A ++ E++ + I + T+N + G CK + + +++M P
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP 296
Query: 245 CVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
VI+++ ++ + E + EL EM + SPN++TY +M + EA ++
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 305 E 305
+
Sbjct: 357 D 357
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 90/180 (50%), Gaps = 4/180 (2%)
Query: 118 GRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNT 177
G++K+ + +L +M G + + T ++ G+ A+ IF+DLQ ++
Sbjct: 417 GKIKLAE---ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473
Query: 178 ESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQE 236
+++ +CK VE A ++ L + + PN T+ + I G CK + EA+ +++
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533
Query: 237 MKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEK 296
M+ G P +Y+T+I+ + + + + +L++EM++ S + + +++ L A K
Sbjct: 534 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK 593
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 83/170 (48%), Gaps = 1/170 (0%)
Query: 137 GSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQA 196
G + T + +++ F +G+ A +F ++ + G+ + + +LLD LC +E+A
Sbjct: 398 GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 457
Query: 197 RQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQC 255
+I+ +L K + + I G CK +VE+A + G +P V++Y+ +I
Sbjct: 458 LEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG 517
Query: 256 YCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
C + + S+ LL +M+ +PN TY ++ A + + ++IE
Sbjct: 518 LCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIE 567
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 5/141 (3%)
Query: 168 LQTLGLEKNTESMNLLLDTLC---KEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKI 224
L+ G+ N ++N++++ C K F ++L P+ TFN I G
Sbjct: 114 LELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYE--PDTTTFNTLIKGLFLE 171
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
+V EA + M GC+P V++Y++I+ C + S +LL +M+ ++ +V TY
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231
Query: 285 TIIMCALAKAEKFDEALQVIE 305
+ I+ +L + D A+ + +
Sbjct: 232 STIIDSLCRDGCIDAAISLFK 252
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 12/130 (9%)
Query: 177 TESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQE 236
T+ NL+LD CK+ LEL IA N +T NI I+ +C+ + A+ + +
Sbjct: 101 TKQFNLVLD-FCKQ----------LEL-NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGK 148
Query: 237 MKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEK 296
+ G P +++T+I+ E S+ L+D M C P+VVTY I+ + ++
Sbjct: 149 VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGD 208
Query: 297 FDEALQVIER 306
AL ++ +
Sbjct: 209 TSLALDLLRK 218
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 98/198 (49%), Gaps = 1/198 (0%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
Y ++D L + + D +L +M +G + T + ++ +W+DA R+ D+
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVE 228
+ N + N L+D KE + +A ++Y E+ K+ I P+ T++ I+G+C R++
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
EA + M C P V++Y+T+I +C + + EL EM + N VTYT ++
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 289 CALAKAEKFDEALQVIER 306
+A D A V ++
Sbjct: 443 HGFFQARDCDNAQMVFKQ 460
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 103/200 (51%), Gaps = 7/200 (3%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQM---RCEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
+Y ++V+ L + +D +LL++M + E +++ +T+ + ++ DA+ +F
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYR---HEDDALNLF 283
Query: 166 DDLQTLGLEKNTESMNLLLDTLCK-EEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKI 224
+++ G+ N + + L+ LC E + + +R + +++ I PN TFN I + K
Sbjct: 284 TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKE 343
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
++ EA EM P + +YS++I +C + + + M ++DC PNVVTY
Sbjct: 344 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403
Query: 285 TIIMCALAKAEKFDEALQVI 304
++ KA++ DE +++
Sbjct: 404 NTLINGFCKAKRIDEGVELF 423
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 96/181 (53%), Gaps = 5/181 (2%)
Query: 126 LRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLD 185
L D++++ + +++T N + FV G+ +A +++D++ ++ + + + L++
Sbjct: 318 LSDMIER-KINPNVVTFNALIDA---FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 373
Query: 186 TLCKEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRP 244
C + +++A+ ++ L + + PN T+N I+G+CK +R++E +EM G
Sbjct: 374 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG 433
Query: 245 CVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
++Y+T+I + ++ + +M + PN++TY ++ L K K ++A+ V
Sbjct: 434 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 493
Query: 305 E 305
E
Sbjct: 494 E 494
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 1/173 (0%)
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
L+DQM G T ++ + ++AV + D + G + N + ++++ LC
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 189 KEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
K ++ A + +++ I N ++ I CK R ++A EM+ G RP VI
Sbjct: 237 KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
+YS++I C CN + +S LL +M + +PNVVT+ ++ A K K EA
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 102/220 (46%), Gaps = 10/220 (4%)
Query: 90 ALGLF----KWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTI 145
A+GLF K L S F+ ++ ++ + +MK D + L ++M+ G L T
Sbjct: 69 AIGLFGGMVKSRPLPSIFE-----FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTY 123
Query: 146 AKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-K 204
++ F Q + A+ + + LG E + +++ LL+ C + + A + ++ +
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 205 QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSK 264
P+ TF IHG + EA + M GC+P +++Y ++ C +
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 243
Query: 265 VYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+ LL++M+A NVV Y+ ++ +L K D+AL +
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 283
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 74/147 (50%), Gaps = 1/147 (0%)
Query: 161 AVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIH 219
+ + + +Q LG+ N + N+L++ C+ + A + ++ K P+ T + ++
Sbjct: 104 VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 220 GWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSP 279
G+C +R+ +A + +M G RP I+++T+I S+ L+D M + C P
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223
Query: 280 NVVTYTIIMCALAKAEKFDEALQVIER 306
N+VTY +++ L K D A ++ +
Sbjct: 224 NLVTYGVVVNGLCKRGDIDLAFNLLNK 250
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 1/176 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+ +++ + K +D+ +L +M G + T ++ F A +A +F +
Sbjct: 402 TYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 461
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRV 227
+ G+ N + N LLD LCK +E+A ++ L + + P +T+NI I G CK +V
Sbjct: 462 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 521
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVT 283
E+ + G +P VI Y+T+I +C + + L +M+ P+ T
Sbjct: 522 EDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 93/196 (47%), Gaps = 7/196 (3%)
Query: 109 SYDMMVDIL---GRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
+++ ++D G++ +KL D + + + I T +++ + F + +A +F
Sbjct: 332 TFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL---INGFCMHDRLDEAKHMF 388
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKI 224
+ + + N + N L++ CK + +++ +++ E+ Q + N T+ IHG+ +
Sbjct: 389 ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQA 448
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
R + A ++M G P +++Y+T++ C K + + +Q P + TY
Sbjct: 449 RDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 508
Query: 285 TIIMCALAKAEKFDEA 300
I++ + KA K ++
Sbjct: 509 NIMIEGMCKAGKVEDG 524
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 95/202 (47%), Gaps = 1/202 (0%)
Query: 104 QHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVR 163
H+ +Y+++++ R + LL +M G ++ T++ ++ + + +DAV
Sbjct: 117 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176
Query: 164 IFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWC 222
+ D + +G +T + L+ L +A + + Q PN T+ + ++G C
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 223 KIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVV 282
K ++ A + +M+ V+ YST+I C ++ L EM+ + PNV+
Sbjct: 237 KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296
Query: 283 TYTIIMCALAKAEKFDEALQVI 304
TY+ ++ L E++ +A +++
Sbjct: 297 TYSSLISCLCNYERWSDASRLL 318
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 79/174 (45%), Gaps = 4/174 (2%)
Query: 128 DLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTL 187
+L+ C +++T NT+ + F A + + V +F ++ GL NT + L+
Sbjct: 389 ELMISKDCFPNVVTYNTL---INGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445
Query: 188 CKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCV 246
+ + A+ ++ ++ + PN T+N + G CK ++E+A + ++ P +
Sbjct: 446 FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 505
Query: 247 ISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
+Y+ +I+ C ++L + + P+V+ Y ++ + +EA
Sbjct: 506 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEA 559
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 10/198 (5%)
Query: 101 SNFQHSPESYDMMVDILGRMKV---------MDKLRDLLDQMRCEGSIITLNTIAKVMRR 151
S F + S D+ D+L + M + L +M C+G T +++
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 152 FVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPN 210
+ AG DA R+ + + G N + L+D LCKE ++ A ++ E+ K + PN
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 211 AHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLD 270
T+N ++G CK +EEA + E + G ++Y+T++ YC K E+L
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 271 EMQAQDCSPNVVTYTIIM 288
EM + P +VT+ ++M
Sbjct: 551 EMLGKGLQPTIVTFNVLM 568
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 103/216 (47%), Gaps = 5/216 (2%)
Query: 91 LGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMR 150
+G F+ A L+++ +Y ++D + MDK +++L +M +G T+ T +M
Sbjct: 514 VGEFEAAGLNAD----TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 151 RFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAP 209
F G D ++ + + G+ N + N L+ C ++ A IY ++ + + P
Sbjct: 570 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP 629
Query: 210 NAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELL 269
+ T+ + G CK R ++EA + QEMKG G V +YS +I+ + + F + E+
Sbjct: 630 DGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689
Query: 270 DEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
D+M+ + + + + K ++ D + I+
Sbjct: 690 DQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPID 725
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 144 TIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL 203
T ++ F G +A ++F ++ GLE ++ + L++ CK ++ A +++ +
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 204 KQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNF 262
Q +PN T+ I G CK ++ A+ + EM G +P + +Y++I+ C N
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 507
Query: 263 SKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+ +L+ E +A + + VTYT +M A K+ + D+A ++++
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 96/199 (48%), Gaps = 1/199 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+ +V+ L + +++ L+ + G T +M + +G+ A I ++
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGWCKIRRV 227
GL+ + N+L++ C +E ++ L + IAPNA TFN + +C +
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
+ A ++M G P +Y +++ +C +N + + L EM+ + S +V TY+++
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672
Query: 288 MCALAKAEKFDEALQVIER 306
+ K +KF EA +V ++
Sbjct: 673 IKGFLKRKKFLEAREVFDQ 691
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 100/238 (42%), Gaps = 38/238 (15%)
Query: 105 HSPE--SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAV 162
++P+ SY +V+ R +DK+ L++ M+ +G ++ + A+A
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 163 RIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGW 221
F ++ G+ +T L+D CK + A + + E+ + I P+ T+ I G+
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 222 CKIRRVEEAHWTIQEM----------------KGY-------------------GCRPCV 246
C+I + EA EM GY GC P V
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 247 ISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
++Y+T+I C E + ELL EM PN+ TY I+ L K+ +EA++++
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 86/161 (53%), Gaps = 13/161 (8%)
Query: 153 VGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEF-VEQARQIYLELKQ-HIAPN 210
V G +A R+F+ + GL + +S N+ L L K+ + A ++ E + + N
Sbjct: 186 VDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWN 245
Query: 211 AHTFNIFIHGWCKIRRVEEAH--WTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYEL 268
++NI IH C++ R++EAH + E+KGY P VISYST++ YC KV++L
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGY--TPDVISYSTVVNGYCRFGELDKVWKL 303
Query: 269 LDEMQAQDCSPNVVTYTII------MCALAKAEK-FDEALQ 302
++ M+ + PN Y I +C LA+AE+ F E ++
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR 344
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 118/279 (42%), Gaps = 52/279 (18%)
Query: 71 LSPNLINILLRRY-KDDWKSALGLFKWASLHSNFQHSPE--------SYDMMVDI---LG 118
LS + N+ L R KD +K+A + F+ PE SY++++ LG
Sbjct: 208 LSVDSCNVYLTRLSKDCYKTATAIIV-------FREFPEVGVCWNVASYNIVIHFVCQLG 260
Query: 119 RMKVMDKLRDLLDQMRCEGSIITLNTIA----------------KVMRR----------- 151
R+K L L++ +I+ +T+ +VM+R
Sbjct: 261 RIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYG 320
Query: 152 -FVGAG----QWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQ 205
+G + A+A F ++ G+ +T L+D CK + A + + E+ +
Sbjct: 321 SIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR 380
Query: 206 HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKV 265
I P+ T+ I G+C+I + EA EM G P ++++ +I YC +
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 266 YELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+ + + M CSPNVVTYT ++ L K D A +++
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 10/198 (5%)
Query: 101 SNFQHSPESYDMMVDILGRMKV---------MDKLRDLLDQMRCEGSIITLNTIAKVMRR 151
S F + S D+ D+L + M + L +M C+G T +++
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 152 FVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPN 210
+ AG DA R+ + + G N + L+D LCKE ++ A ++ E+ K + PN
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 211 AHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLD 270
T+N ++G CK +EEA + E + G ++Y+T++ YC K E+L
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 271 EMQAQDCSPNVVTYTIIM 288
EM + P +VT+ ++M
Sbjct: 551 EMLGKGLQPTIVTFNVLM 568
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 103/216 (47%), Gaps = 5/216 (2%)
Query: 91 LGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMR 150
+G F+ A L+++ +Y ++D + MDK +++L +M +G T+ T +M
Sbjct: 514 VGEFEAAGLNAD----TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 151 RFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAP 209
F G D ++ + + G+ N + N L+ C ++ A IY ++ + + P
Sbjct: 570 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP 629
Query: 210 NAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELL 269
+ T+ + G CK R ++EA + QEMKG G V +YS +I+ + + F + E+
Sbjct: 630 DGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689
Query: 270 DEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
D+M+ + + + + K ++ D + I+
Sbjct: 690 DQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPID 725
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 144 TIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL 203
T ++ F G +A ++F ++ GLE ++ + L++ CK ++ A +++ +
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 204 KQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNF 262
Q +PN T+ I G CK ++ A+ + EM G +P + +Y++I+ C N
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 507
Query: 263 SKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+ +L+ E +A + + VTYT +M A K+ + D+A ++++
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 96/199 (48%), Gaps = 1/199 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+ +V+ L + +++ L+ + G T +M + +G+ A I ++
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGWCKIRRV 227
GL+ + N+L++ C +E ++ L + IAPNA TFN + +C +
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
+ A ++M G P +Y +++ +C +N + + L EM+ + S +V TY+++
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672
Query: 288 MCALAKAEKFDEALQVIER 306
+ K +KF EA +V ++
Sbjct: 673 IKGFLKRKKFLEAREVFDQ 691
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 100/238 (42%), Gaps = 38/238 (15%)
Query: 105 HSPE--SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAV 162
++P+ SY +V+ R +DK+ L++ M+ +G ++ + A+A
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 163 RIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGW 221
F ++ G+ +T L+D CK + A + + E+ + I P+ T+ I G+
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 222 CKIRRVEEAHWTIQEM----------------KGY-------------------GCRPCV 246
C+I + EA EM GY GC P V
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 247 ISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
++Y+T+I C E + ELL EM PN+ TY I+ L K+ +EA++++
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 86/161 (53%), Gaps = 13/161 (8%)
Query: 153 VGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEF-VEQARQIYLELKQ-HIAPN 210
V G +A R+F+ + GL + +S N+ L L K+ + A ++ E + + N
Sbjct: 186 VDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWN 245
Query: 211 AHTFNIFIHGWCKIRRVEEAH--WTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYEL 268
++NI IH C++ R++EAH + E+KGY P VISYST++ YC KV++L
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGY--TPDVISYSTVVNGYCRFGELDKVWKL 303
Query: 269 LDEMQAQDCSPNVVTYTII------MCALAKAEK-FDEALQ 302
++ M+ + PN Y I +C LA+AE+ F E ++
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR 344
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 118/279 (42%), Gaps = 52/279 (18%)
Query: 71 LSPNLINILLRRY-KDDWKSALGLFKWASLHSNFQHSPE--------SYDMMVDI---LG 118
LS + N+ L R KD +K+A + F+ PE SY++++ LG
Sbjct: 208 LSVDSCNVYLTRLSKDCYKTATAIIV-------FREFPEVGVCWNVASYNIVIHFVCQLG 260
Query: 119 RMKVMDKLRDLLDQMRCEGSIITLNTIA----------------KVMRR----------- 151
R+K L L++ +I+ +T+ +VM+R
Sbjct: 261 RIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYG 320
Query: 152 -FVGAG----QWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQ 205
+G + A+A F ++ G+ +T L+D CK + A + + E+ +
Sbjct: 321 SIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR 380
Query: 206 HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKV 265
I P+ T+ I G+C+I + EA EM G P ++++ +I YC +
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 266 YELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+ + + M CSPNVVTYT ++ L K D A +++
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 133/303 (43%), Gaps = 34/303 (11%)
Query: 14 FSRLAIASCGARGFRHQEQCQSL-MRSVDILTSKVAKGS-----SEEEIIRSLCNDQACD 67
F L I S R +C + M+S D S + K S S EE+ R L
Sbjct: 40 FHALKIGSRKKHWRRKSMRCSVVSMKSSDFSGSMIRKSSKPDLSSSEEVTRGL------- 92
Query: 68 AIHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDIL---GRMKVMD 124
+ D S+ FK + + N H+ E+ + M++ L G+++ M
Sbjct: 93 --------------KSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMA 138
Query: 125 KLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLL 184
+ DL+ + + T TI K + G Q A+R ++ G N S N L+
Sbjct: 139 YVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALR---KMREFGFVLNAYSYNGLI 195
Query: 185 DTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCR 243
L K F +A ++Y + + P+ T++ + G K R ++ ++EM+ G +
Sbjct: 196 HLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLK 255
Query: 244 PCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
P V +++ I+ ++ YE+L M + C P+VVTYT+++ AL A K D A +V
Sbjct: 256 PNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEV 315
Query: 304 IER 306
E+
Sbjct: 316 FEK 318
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 104/214 (48%), Gaps = 4/214 (1%)
Query: 96 WASLHSNFQHSPE--SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFV 153
W+ + + H P+ ++ ++VD L + + D LD MR +G + L+T ++ +
Sbjct: 351 WSEMEKD-GHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLL 409
Query: 154 GAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAH 212
+ DA+ +F ++++LG++ + + +D K A + + ++K + IAPN
Sbjct: 410 RVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIV 469
Query: 213 TFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEM 272
N ++ K R EA +K G P ++Y+ +++CY + +LL EM
Sbjct: 470 ACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529
Query: 273 QAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
C P+V+ ++ L KA++ DEA ++ R
Sbjct: 530 MENGCEPDVIVVNSLINTLYKADRVDEAWKMFMR 563
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 1/198 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+ ++ L R+ +D +L M G T T + + +G A+ F+ +
Sbjct: 400 TYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKM 459
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRV 227
+T G+ N + N L +L K +A+QI+ LK + P++ T+N+ + + K+ +
Sbjct: 460 KTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEI 519
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
+EA + EM GC P VI +++I + +++ M+ P VVTY +
Sbjct: 520 DEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTL 579
Query: 288 MCALAKAEKFDEALQVIE 305
+ L K K EA+++ E
Sbjct: 580 LAGLGKNGKIQEAIELFE 597
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 83/159 (52%), Gaps = 1/159 (0%)
Query: 144 TIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL 203
T +M+ + G+ +A+++ ++ G E + +N L++TL K + V++A ++++ +
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
Query: 204 KQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNF 262
K+ + P T+N + G K +++EA + M GC P I+++T+ C C
Sbjct: 565 KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEV 624
Query: 263 SKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEAL 301
+ ++L +M C P+V TY I+ L K + EA+
Sbjct: 625 TLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAM 663
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 8/198 (4%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQM---RCEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
+Y+ ++D G+ +D+L +L +M CE + IT N V+ V AG DA+ ++
Sbjct: 822 TYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNI---VISGLVKAGNVDDALDLY 878
Query: 166 DDLQT-LGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCK 223
DL + + L+D L K + +A+Q++ + + PN +NI I+G+ K
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 224 IRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVT 283
+ A + M G RP + +YS ++ C C + E++ +P+VV
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVC 998
Query: 284 YTIIMCALAKAEKFDEAL 301
Y +I+ L K+ + +EAL
Sbjct: 999 YNLIINGLGKSHRLEEAL 1016
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 115/244 (47%), Gaps = 22/244 (9%)
Query: 81 RRYKDDWKSALGLFKWASLHSNFQHSPE---------------SYDMMVDILGRMKVMDK 125
R K D + L +FK S+ + +P SY+ ++ +L + + +
Sbjct: 147 RIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTE 206
Query: 126 LRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWAD---AVRIFDDLQTLGLEKNTESMNL 182
++ +M EG +L T + +M VG G+ D + + +++TLGL+ N + +
Sbjct: 207 AMEVYRRMILEGFRPSLQTYSSLM---VGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTI 263
Query: 183 LLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYG 241
+ L + + +A +I + + P+ T+ + I C R+++ A ++MK
Sbjct: 264 CIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGR 323
Query: 242 CRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEAL 301
+P ++Y T++ + + ++ V + EM+ P+VVT+TI++ AL KA F EA
Sbjct: 324 HKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAF 383
Query: 302 QVIE 305
++
Sbjct: 384 DTLD 387
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 90/197 (45%), Gaps = 1/197 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y +++D L + +D +++ ++M+ T ++ RF + + ++
Sbjct: 295 TYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEM 354
Query: 169 QTLGLEKNTESMNLLLDTLCKE-EFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRV 227
+ G + + +L+D LCK F E + + Q I PN HT+N I G ++ R+
Sbjct: 355 EKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRL 414
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
++A M+ G +P +Y I Y + E ++M+ + +PN+V
Sbjct: 415 DDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNAS 474
Query: 288 MCALAKAEKFDEALQVI 304
+ +LAKA + EA Q+
Sbjct: 475 LYSLAKAGRDREAKQIF 491
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Query: 188 CKEEFVEQARQIYLELKQHIA--PNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPC 245
CK V AR ++ + + + P T+N+ I G + +E A ++K GC P
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD 819
Query: 246 VISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
V +Y+ ++ Y +++EL EM +C N +T+ I++ L KA D+AL +
Sbjct: 820 VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL 877
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 114/240 (47%), Gaps = 10/240 (4%)
Query: 69 IHLSPNLINILLRRYKDDWKSALGLFKWASLHS-NFQHSPESYDMMVDILGRMKVMDKLR 127
+H LI LLR ++ D AL LF ++ S + + +Y + +D G+
Sbjct: 398 LHTYNTLICGLLRVHRLD--DALELF--GNMESLGVKPTAYTYIVFIDYYGKSGDSVSAL 453
Query: 128 DLLDQMRCEGSIITLNTIA--KVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLD 185
+ ++M+ +G I N +A + AG+ +A +IF L+ +GL ++ + N+++
Sbjct: 454 ETFEKMKTKG--IAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMK 511
Query: 186 TLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRP 244
K +++A ++ E+ ++ P+ N I+ K RV+EA MK +P
Sbjct: 512 CYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 571
Query: 245 CVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
V++Y+T++ + EL + M + C PN +T+ + L K ++ AL+++
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 631
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 2/177 (1%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
Y+++++ G+ D L +M EG L T + ++ G+ + + F +L+
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELK 988
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK--QHIAPNAHTFNIFIHGWCKIRRV 227
GL + NL+++ L K +E+A ++ E+K + I P+ +T+N I V
Sbjct: 989 ESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMV 1048
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
EEA E++ G P V +++ +I+ Y Y + M SPN TY
Sbjct: 1049 EEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 98/214 (45%), Gaps = 4/214 (1%)
Query: 96 WASLHSNFQHSPE--SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFV 153
+ L S+ SP +Y ++D L + + + + L + M G ++ F
Sbjct: 878 YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFG 937
Query: 154 GAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAH 212
AG+ A +F + G+ + ++ ++L+D LC V++ + ELK+ + P+
Sbjct: 938 KAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVV 997
Query: 213 TFNIFIHGWCKIRRVEEAHWTIQEMK-GYGCRPCVISYSTIIQCYCNEQNFSKVYELLDE 271
+N+ I+G K R+EEA EMK G P + +Y+++I + ++ +E
Sbjct: 998 CYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNE 1057
Query: 272 MQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+Q PNV T+ ++ + + K + A V +
Sbjct: 1058 IQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQ 1091
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 105/260 (40%), Gaps = 49/260 (18%)
Query: 52 SEEEIIRSLCNDQACDAIHLSPNLINILLRRYK---DDWKSALGLFKWASLHSNFQHSPE 108
SE + +C D D+I L+ I+ RY ++ A LF+ + Q
Sbjct: 736 SERLVANGICRDG--DSI-----LVPII--RYSCKHNNVSGARTLFEKFTKDLGVQPKLP 786
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y++++ L +++ +D+ Q++ G I + T ++ + +G+ + ++ ++
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL--KQHIAPNAHTFNIFIHGWCKIRR 226
T E NT + N+++ L K V+ A +Y +L + +P A T+ I G K R
Sbjct: 847 STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 906
Query: 227 VEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTI 286
+ EA + M YGCR PN Y I
Sbjct: 907 LYEAKQLFEGMLDYGCR-----------------------------------PNCAIYNI 931
Query: 287 IMCALAKAEKFDEALQVIER 306
++ KA + D A + +R
Sbjct: 932 LINGFGKAGEADAACALFKR 951
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 8/180 (4%)
Query: 130 LDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCK 189
+ +M+ + +++T NT+ + + G+ +A+ +F+ + G NT + N L D LCK
Sbjct: 564 MKEMKLKPTVVTYNTLLAGLGK---NGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCK 620
Query: 190 EEFVEQA-RQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVIS 248
+ V A + ++ + P+ T+N I G K +V+EA +MK P ++
Sbjct: 621 NDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVT 679
Query: 249 YSTIIQCYCNEQNFSKVYELLDEM--QAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
T++ Y+++ D N+ +I LA+A D A+ ER
Sbjct: 680 LCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEA-GIDNAVSFSER 738
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 103/201 (51%), Gaps = 7/201 (3%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEG---SIITLNTIAKVMRRFVGAGQWADAVRIFD 166
++ ++D L + + ++ DL +M +G +++T N++ + + G+W+DA R+
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY---GRWSDASRLLS 317
Query: 167 DLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIR 225
++ + N + N L+D KE + +A +++ E+ Q I P+ T+N+ I+G+C
Sbjct: 318 NMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHN 377
Query: 226 RVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYT 285
R++EA + M C P + +Y+T+I +C + EL EM + N VTYT
Sbjct: 378 RLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYT 437
Query: 286 IIMCALAKAEKFDEALQVIER 306
I+ +A D A V ++
Sbjct: 438 TIIQGFFQAGDCDSAQMVFKQ 458
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 102/201 (50%), Gaps = 7/201 (3%)
Query: 109 SYDMMVDIL---GRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
+Y+ +++ L GR +L + + + +++T N + + F G+ +A ++
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNAL---IDAFFKEGKLVEAEKLH 351
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGWCKI 224
+++ ++ +T + NLL++ C +++A+Q++ + + PN T+N I+G+CK
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKC 411
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
+RVE+ +EM G ++Y+TIIQ + + + +M + +++TY
Sbjct: 412 KRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTY 471
Query: 285 TIIMCALAKAEKFDEALQVIE 305
+I++ L K D AL + +
Sbjct: 472 SILLHGLCSYGKLDTALVIFK 492
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
L+DQM G T ++ + ++AV + D + G + + + +++ LC
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 189 KEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
K ++ A + +++ I N FN I CK R VE A EM+ G RP V+
Sbjct: 235 KRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVV 294
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
+Y+++I C CN +S LL M + +PNVVT+ ++ A K K EA
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA 347
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 1/178 (0%)
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
L+DQM G L T V+ G A+ + + ++ ++ N N ++D+LC
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC 269
Query: 189 KEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
K VE A ++ E++ + I PN T+N I+ C R +A + M P V+
Sbjct: 270 KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+++ +I + E + +L +EM + P+ +TY +++ + DEA Q+ +
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFK 387
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 90/196 (45%), Gaps = 1/196 (0%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
++ ++ + +M + + L +QM+ G L T + + F Q + A+ + +
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVE 228
LG E + +++ LL+ C + + A + ++ + P+ TF IHG +
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
EA + +M GC+P +++Y T++ C + LL++M+A NVV + I+
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 289 CALAKAEKFDEALQVI 304
+L K + A+ +
Sbjct: 266 DSLCKYRHVEVAVDLF 281
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 89/188 (47%), Gaps = 7/188 (3%)
Query: 123 MDKLRDLLDQM---RCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTES 179
+D DL M R SI+ N K++ ++ + + + +QTLG+ + +
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFN---KLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120
Query: 180 MNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMK 238
++ ++ C+ + A + ++ K P+ T + ++G+C +R+ +A + +M
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 239 GYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFD 298
G +P +++T+I S+ L+D+M + C P++VTY ++ L K D
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 299 EALQVIER 306
AL ++ +
Sbjct: 241 LALNLLNK 248
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 86/184 (46%), Gaps = 4/184 (2%)
Query: 108 ESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDD 167
++Y+ +++ + K ++ +L +M G + T +++ F AG A +F
Sbjct: 399 QTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQ 458
Query: 168 LQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRR 226
+ + + + + ++LL LC ++ A I+ L K + N +N I G CK +
Sbjct: 459 MVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGK 518
Query: 227 VEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTI 286
V EA W + +P V++Y+T+I C+++ + +L +M+ PN TY
Sbjct: 519 VGEA-WDL--FCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNT 575
Query: 287 IMCA 290
++ A
Sbjct: 576 LIRA 579
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
Query: 156 GQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFN 215
G+ A+ IF LQ +E N N +++ +CK V +A ++ L I P+ T+N
Sbjct: 482 GKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS--IKPDVVTYN 539
Query: 216 IFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQ 275
I G C R ++EA ++MK G P +Y+T+I+ + + + EL+ EM++
Sbjct: 540 TMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSS 599
Query: 276 DCSPNVVTYTII 287
+ T +++
Sbjct: 600 GFVGDASTISLV 611
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 124/297 (41%), Gaps = 36/297 (12%)
Query: 27 FRHQEQCQSLMRSVDILTSKVAKG-----SSEEEIIRSLCN-DQACDAIHL--------- 71
+RH E +VD+ T KG + +I LCN + DA L
Sbjct: 271 YRHVEV------AVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI 324
Query: 72 SPNLI--NILLRRYKDDWKSALGLFKWASLHSN-FQHS--PES--YDMMVDILGRMKVMD 124
+PN++ N L+ + + K L + LH Q S P++ Y+++++ +D
Sbjct: 325 NPNVVTFNALIDAFFKEGK----LVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 125 KLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLL 184
+ + + M + + + T ++ F + D V +F ++ GL NT + ++
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 185 DTLCKEEFVEQARQIYLELKQHIAP-NAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCR 243
+ + A+ ++ ++ + P + T++I +HG C +++ A + ++
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME 500
Query: 244 PCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
+ Y+T+I+ C KV E D + P+VVTY ++ L EA
Sbjct: 501 LNIFIYNTMIEGMCKA---GKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEA 554
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 138/301 (45%), Gaps = 11/301 (3%)
Query: 12 SLFSRLAIASCGARGFRHQEQCQSLMRSVDILTSKVAKGSSEEEIIRSLCNDQACDAIHL 71
SL SRL S R Q S +R + +++ + +L + A + L
Sbjct: 4 SLISRLVSPS-----LRSQPSKISALRFLTTVSAAERLYGQLQGCTSNLEKELASANVQL 58
Query: 72 SPNLINILLRR-YKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLL 130
+ IN +LRR + ++S L F WA S+ +HS Y DIL D ++ ++
Sbjct: 59 DSSCINEVLRRCDPNQFQSGLRFFIWAGTLSSHRHSAYMYTKACDILKIRAKPDLIKYVI 118
Query: 131 DQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKE 190
+ R E + + T+ V+ A +A+ + + +T + NL++ +
Sbjct: 119 ESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADK 178
Query: 191 EFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISY 249
+ A + E+ + P+ T+ I+G+C ++++A +EM + C ++Y
Sbjct: 179 GDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTY 238
Query: 250 STIIQCYCNEQNFSKVYELLDEMQAQD----CSPNVVTYTIIMCALAKAEKFDEALQVIE 305
S I++ C + + ELL EM+ +D SPN VTYT+++ A + + +EAL V++
Sbjct: 239 SRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLD 298
Query: 306 R 306
R
Sbjct: 299 R 299
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 111/237 (46%), Gaps = 28/237 (11%)
Query: 64 QACD--AIHLSPNLINILLRRYKDD--------WKSALGLFKWASLHSN----FQHSPE- 108
+ACD I P+LI ++ Y+ + + L L A+L + PE
Sbjct: 100 KACDILKIRAKPDLIKYVIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEF 159
Query: 109 -------SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADA 161
+Y++++ + ++ L+ +M C G + T ++ + AG+ DA
Sbjct: 160 NVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDA 219
Query: 162 VRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-----IAPNAHTFNI 216
R+ ++ N+ + + +L+ +CK +E+A ++ E+++ I+PNA T+ +
Sbjct: 220 WRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTL 279
Query: 217 FIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYC-NEQNFSKVYELLDEM 272
I +C+ RRVEEA + M GC P ++ +IQ N+++ + +L+D++
Sbjct: 280 VIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKL 336
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 98/197 (49%), Gaps = 7/197 (3%)
Query: 113 MVDILGRMKVMDKLRDLLDQM---RCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
++D LG++ +D + ++M C + I ++ ++ F G+ D +I+ D+
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSL---IKNFFNHGRKEDGHKIYKDMI 509
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVE 228
+ + +N +D + K E+ R ++ E+K + P+A +++I IHG K
Sbjct: 510 NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFAN 569
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
E + MK GC +Y+ +I +C +K Y+LL+EM+ + P VVTY ++
Sbjct: 570 ETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVI 629
Query: 289 CALAKAEKFDEALQVIE 305
LAK ++ DEA + E
Sbjct: 630 DGLAKIDRLDEAYMLFE 646
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 1/205 (0%)
Query: 102 NFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADA 161
F+ + +Y ++D L ++ +D+ L ++ + + + + + ++ F G+ +A
Sbjct: 617 GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEA 676
Query: 162 VRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHG 220
I ++L GL N + N LLD L K E + +A + +K+ PN T+ I I+G
Sbjct: 677 YLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILING 736
Query: 221 WCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPN 280
CK+R+ +A QEM+ G +P ISY+T+I N ++ L D +A P+
Sbjct: 737 LCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPD 796
Query: 281 VVTYTIIMCALAKAEKFDEALQVIE 305
Y ++ L+ + +A + E
Sbjct: 797 SACYNAMIEGLSNGNRAMDAFSLFE 821
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 98/199 (49%), Gaps = 1/199 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y++++D + ++K LL++M+ +G T+ T V+ + +A +F++
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRV 227
++ +E N + L+D K +++A I EL Q + PN +T+N + K +
Sbjct: 649 KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEI 708
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
EA Q MK C P ++Y +I C + F+K + EMQ Q P+ ++YT +
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768
Query: 288 MCALAKAEKFDEALQVIER 306
+ LAKA EA + +R
Sbjct: 769 ISGLAKAGNIAEAGALFDR 787
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 102/204 (50%), Gaps = 1/204 (0%)
Query: 103 FQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAV 162
F+ + +Y ++ + D + L QM+ G T++ ++R F G+ A+
Sbjct: 164 FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSAL 223
Query: 163 RIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGW 221
+ D++++ L+ + N+ +D+ K V+ A + + E++ + + P+ T+ I
Sbjct: 224 SLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVL 283
Query: 222 CKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNV 281
CK R++EA + ++ PC +Y+T+I Y + F + Y LL+ +A+ P+V
Sbjct: 284 CKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSV 343
Query: 282 VTYTIIMCALAKAEKFDEALQVIE 305
+ Y I+ L K K DEAL+V E
Sbjct: 344 IAYNCILTCLRKMGKVDEALKVFE 367
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 121/293 (41%), Gaps = 44/293 (15%)
Query: 50 GSSEEEIIRSLCNDQACDAIHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPES 109
G S E + +L + P + +LRR KD A+ F+W + H PES
Sbjct: 49 GPSAENTLSAL-------SFKPQPEFVIGVLRRLKD-VNRAIEYFRWYERRTELPHCPES 100
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNT-------------------IAKVMR 150
Y+ ++ ++ R + D L +L +M G ++NT + ++MR
Sbjct: 101 YNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMR 160
Query: 151 RF------------VGAGQWAD----AVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVE 194
+F +GA + + +F +Q LG E L+ KE V+
Sbjct: 161 KFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVD 220
Query: 195 QARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTII 253
A + E+K + + +N+ I + K+ +V+ A E++ G +P ++Y+++I
Sbjct: 221 SALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMI 280
Query: 254 QCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
C + E+ + ++ P Y ++ A KFDEA ++ER
Sbjct: 281 GVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 89/180 (49%), Gaps = 5/180 (2%)
Query: 127 RDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDT 186
+D+++Q C + LNT M + AG+ +F++++ + S ++L+
Sbjct: 506 KDMINQ-NCSPDLQLLNTYMDCMFK---AGEPEKGRAMFEEIKARRFVPDARSYSILIHG 561
Query: 187 LCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPC 245
L K F + +++ +K Q + +NI I G+CK +V +A+ ++EMK G P
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621
Query: 246 VISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
V++Y ++I + Y L +E +++ NVV Y+ ++ K + DEA ++E
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILE 681
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 105/200 (52%), Gaps = 6/200 (3%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGS--IITLNTIAKVMRRFVGAGQWADAVRIFD 166
+Y+ ++ L +M +D+ + ++M+ + + + T N + ++ R AG+ A + D
Sbjct: 345 AYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCR---AGKLDTAFELRD 401
Query: 167 DLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHI-APNAHTFNIFIHGWCKIR 225
+Q GL N ++N+++D LCK + +++A ++ E+ + P+ TF I G K+
Sbjct: 402 SMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVG 461
Query: 226 RVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYT 285
RV++A+ ++M CR I Y+++I+ + N +++ +M Q+CSP++
Sbjct: 462 RVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLN 521
Query: 286 IIMCALAKAEKFDEALQVIE 305
M + KA + ++ + E
Sbjct: 522 TYMDCMFKAGEPEKGRAMFE 541
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 96/198 (48%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y M+ +L + +D+ ++ + + + ++ + AG++ +A + +
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVE 228
+ G + + N +L L K V++A +++ E+K+ APN T+NI I C+ +++
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLD 394
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
A M+ G P V + + ++ C Q + + +EM + C+P+ +T+ ++
Sbjct: 395 TAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLI 454
Query: 289 CALAKAEKFDEALQVIER 306
L K + D+A +V E+
Sbjct: 455 DGLGKVGRVDDAYKVYEK 472
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 92/184 (50%), Gaps = 8/184 (4%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSI---ITLNTIAKVMRRFVGAGQWADAVRIF 165
+Y+ M+ G D+ LL++ R +GSI I N I +R+ G+ +A+++F
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKM---GKVDEALKVF 366
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKI 224
++++ N + N+L+D LC+ ++ A ++ + K + PN T NI + CK
Sbjct: 367 EEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKS 425
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
++++EA +EM C P I++ ++I Y++ ++M DC N + Y
Sbjct: 426 QKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVY 485
Query: 285 TIIM 288
T ++
Sbjct: 486 TSLI 489
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 100/206 (48%), Gaps = 1/206 (0%)
Query: 102 NFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADA 161
F+ Y+ ++D ++ +++ +L D+M +G T ++ +G+W+DA
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 162 VRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHG 220
R+ D+ + N + ++D KE +A ++Y E+ + + P+ T+N I+G
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
Query: 221 WCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPN 280
C RV+EA + M GC P V++Y+T+I +C + + +L EM + +
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348
Query: 281 VVTYTIIMCALAKAEKFDEALQVIER 306
+TY I+ +A + D A ++ R
Sbjct: 349 TITYNTIIQGYFQAGRPDAAQEIFSR 374
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 88/163 (53%), Gaps = 4/163 (2%)
Query: 144 TIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY-LE 202
T V+ FV G++++A+++++++ ++ + + N L++ LC V++A+Q+ L
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Query: 203 LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNF 262
+ + P+ T+N I+G+CK +RV+E +EM G I+Y+TIIQ Y
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365
Query: 263 SKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
E+ M D PN+ TY+I++ L + ++AL + E
Sbjct: 366 DAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFE 405
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 92/206 (44%), Gaps = 28/206 (13%)
Query: 108 ESYDMMVDILGRMKVMDKLRDLLDQM-------RCEGSIITLNTIAKVMRRFVGAGQWAD 160
++YD+++ + M+V DL RC +I L+ + K+M+
Sbjct: 83 KNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMK---------- 132
Query: 161 AVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIH 219
G E + +++ L++ C+ V A + ++++ P+ +N I
Sbjct: 133 ----------FGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID 182
Query: 220 GWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSP 279
G CKI V +A M+ G R ++Y++++ C +S L+ +M +D P
Sbjct: 183 GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 242
Query: 280 NVVTYTIIMCALAKAEKFDEALQVIE 305
NV+T+T ++ K KF EA+++ E
Sbjct: 243 NVITFTAVIDVFVKEGKFSEAMKLYE 268
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 88/175 (50%), Gaps = 10/175 (5%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSI---ITLNTIAKVMRRFVGAGQWADAVRIF 165
+Y+ +++ + K +D+ L +M G + IT NTI ++ + AG+ A IF
Sbjct: 316 TYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI---IQGYFQAGRPDAAQEIF 372
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKI 224
+ + N + ++LL LC VE+A ++ + K I + T+NI IHG CKI
Sbjct: 373 SRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKI 429
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSP 279
VE+A + + G +P V+SY+T+I +C ++ + K L +MQ P
Sbjct: 430 GNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 93/192 (48%), Gaps = 2/192 (1%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+ +++ L +D+ + +LD M +G + + T ++ F + + + ++F ++
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVE 228
GL +T + N ++ + + A++I+ + PN T++I ++G C RVE
Sbjct: 341 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR--PNIRTYSILLYGLCMNWRVE 398
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
+A + M+ + +Y+ +I C N ++L + + P+VV+YT ++
Sbjct: 399 KALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI 458
Query: 289 CALAKAEKFDEA 300
+ ++D++
Sbjct: 459 SGFCRKRQWDKS 470
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 96/204 (47%), Gaps = 3/204 (1%)
Query: 102 NFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADA 161
N + S +Y+++++ + M++ R MR G +T + ++ + G + DA
Sbjct: 268 NIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDA 327
Query: 162 VRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGW 221
+ D++ G+ T + N+ + LC ++ AR++ L AP+ ++N +HG+
Sbjct: 328 WGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAREL---LSSMAAPDVVSYNTLMHGY 384
Query: 222 CKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNV 281
K+ + EA +++ P +++Y+T+I C N L +EM Q P+V
Sbjct: 385 IKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDV 444
Query: 282 VTYTIIMCALAKAEKFDEALQVIE 305
+TYT ++ K A +V +
Sbjct: 445 ITYTTLVKGFVKNGNLSMATEVYD 468
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 85/168 (50%), Gaps = 4/168 (2%)
Query: 138 SIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQAR 197
S+ N + KV+R + A +++ + G+ + N +LD+ K +E+
Sbjct: 202 SVRNCNIVLKVLR---DSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVD 258
Query: 198 QIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCY 256
+I+LE+K ++I + T+NI I+G+ K ++EEA +M+ G S++ +I+ Y
Sbjct: 259 KIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGY 318
Query: 257 CNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
C + F + + DEM P TY I +CAL + D+A +++
Sbjct: 319 CKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELL 366
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 97/199 (48%), Gaps = 8/199 (4%)
Query: 109 SYDMMVDIL---GRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
+Y+ ++D L G ++ +L++ + +IT T+ K FV G + A ++
Sbjct: 411 TYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVK---GFVKNGNLSMATEVY 467
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL--KQHIAPNAHTFNIFIHGWCK 223
D++ G++ + + + ++A +++ E+ H AP+ +N+ I G CK
Sbjct: 468 DEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCK 527
Query: 224 IRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVT 283
+ + +A +++ G P ++Y+T+I+ Y F L DEM + P+V+T
Sbjct: 528 VGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVIT 587
Query: 284 YTIIMCALAKAEKFDEALQ 302
Y +++ AKA + ++A Q
Sbjct: 588 YFVLIYGHAKAGRLEQAFQ 606
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 5/203 (2%)
Query: 99 LHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQW 158
+ F S + ++++ +L ++M+K + + M G + T+ T ++ AG
Sbjct: 195 IRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDL 254
Query: 159 ADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIF 217
+I+ +++ +E + + N+L++ K +E+AR+ + ++++ A ++FN
Sbjct: 255 ERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPL 314
Query: 218 IHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDC 277
I G+CK ++A EM G P +Y+ I C+ ELL M A
Sbjct: 315 IEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA--- 371
Query: 278 SPNVVTYTIIMCALAKAEKFDEA 300
P+VV+Y +M K KF EA
Sbjct: 372 -PDVVSYNTLMHGYIKMGKFVEA 393
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 194 EQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTI 252
+ AR +Y E L++ + P+ T+ + I+G K R+E+A EMK G RP V++++ +
Sbjct: 567 KMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNAL 626
Query: 253 IQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
+ C N + Y L +M+ + PN +YT+++ EK++E +++
Sbjct: 627 LYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKL 677
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 102/206 (49%), Gaps = 4/206 (1%)
Query: 104 QHSPE--SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADA 161
H+P+ Y++ +D L ++ + K + ++ G + T V+R ++ GQ+ A
Sbjct: 510 HHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMA 569
Query: 162 VRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHG 220
++D++ L + + +L+ K +EQA Q E+K+ + PN T N ++G
Sbjct: 570 RNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYG 629
Query: 221 WCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPN 280
CK ++EA+ + +M+ G P SY+ +I C+ + + +V +L EM ++ P+
Sbjct: 630 MCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPD 689
Query: 281 VVTYTIIMCALAKAEKFDEALQVIER 306
T+ + L K + E ++ +ER
Sbjct: 690 GYTHRALFKHLEKDHESRE-VEFLER 714
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 121/275 (44%), Gaps = 43/275 (15%)
Query: 71 LSPNLINILLRRY--KDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRD 128
LS N ++ + + + DW+ +L LFK+ + + Y +M+ +LGR ++DK +
Sbjct: 103 LSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLE 162
Query: 129 LLDQMRCEG--------------------------------------SIITLNTIAKVMR 150
+ D+M +G SI+T NT+
Sbjct: 163 VFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACA 222
Query: 151 RFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAP 209
R G W + +F +++ G++ + + N LL ++A ++ + I P
Sbjct: 223 R--GGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVP 280
Query: 210 NAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELL 269
+ T++ + + K+RR+E+ + EM G P + SY+ +++ Y + + +
Sbjct: 281 DLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVF 340
Query: 270 DEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+MQA C+PN TY++++ ++ ++D+ Q+
Sbjct: 341 HQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLF 375
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 94/194 (48%), Gaps = 1/194 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y +V+ G+++ ++K+ DLL +M GS+ + + ++ + +G +A+ +F +
Sbjct: 284 TYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 343
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRV 227
Q G N + ++LL+ + + RQ++LE+K + P+A T+NI I + +
Sbjct: 344 QAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYF 403
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
+E +M P + +Y II ++L M A D P+ YT +
Sbjct: 404 KEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGV 463
Query: 288 MCALAKAEKFDEAL 301
+ A +A ++EAL
Sbjct: 464 IEAFGQAALYEEAL 477
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 106/232 (45%), Gaps = 4/232 (1%)
Query: 77 NILLRRYKDD--WKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMR 134
NIL+ + + +K + LF + N + E+Y+ ++ G+ + + R +L M
Sbjct: 391 NILIEVFGEGGYFKEVVTLFH-DMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMT 449
Query: 135 CEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVE 194
+ + V+ F A + +A+ F+ + +G + E+ + LL + + V+
Sbjct: 450 ANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVK 509
Query: 195 QARQIYLELKQHIAP-NAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTII 253
++ I L P N TFN I + + + EEA T +M+ C P + ++
Sbjct: 510 ESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVL 569
Query: 254 QCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
Y + + E +EM+A D P+++ Y +++ K E++D+ +++E
Sbjct: 570 SVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLE 621
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 113/252 (44%), Gaps = 3/252 (1%)
Query: 55 EIIRSLCNDQACDAIHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMV 114
E++ + N++ +I +IN R DW+ LGLF H Q +Y+ ++
Sbjct: 197 ELLDRMKNEKISPSILTYNTVINACARG-GLDWEGLLGLFAEMR-HEGIQPDIVTYNTLL 254
Query: 115 DILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLE 174
+ D+ + M G + L T + ++ F + + ++ + G
Sbjct: 255 SACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSL 314
Query: 175 KNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWT 233
+ S N+LL+ K +++A ++ +++ PNA+T+++ ++ + + R ++
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Query: 234 IQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAK 293
EMK P +Y+ +I+ + F +V L +M ++ P++ TY I+ A K
Sbjct: 375 FLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGK 434
Query: 294 AEKFDEALQVIE 305
++A ++++
Sbjct: 435 GGLHEDARKILQ 446
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 77/174 (44%), Gaps = 1/174 (0%)
Query: 106 SPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
S ++Y +++ G+ + ++ + M GS ++ T ++ F G ++ I
Sbjct: 456 SSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAIL 515
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKI 224
L G+ +N ++ N ++ + E+A + Y+++ K P+ T + +
Sbjct: 516 SRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFA 575
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCS 278
R V+E +EMK P ++ Y ++ Y + + V ELL+EM + S
Sbjct: 576 RLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVS 629
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 103/216 (47%), Gaps = 2/216 (0%)
Query: 86 DWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTI 145
D +SAL L ++ + Y+ ++D L + ++L +M +G + T
Sbjct: 56 DTESALNLLSKME-ETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITY 114
Query: 146 AKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LK 204
+ ++ F +G+W DA ++ D+ + + + + L++ L KE V +A +IY + L+
Sbjct: 115 SGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLR 174
Query: 205 QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSK 264
+ I P T+N I G+CK R+ +A + M C P V+++ST+I YC +
Sbjct: 175 RGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDN 234
Query: 265 VYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
E+ EM + N VTYT ++ + D A
Sbjct: 235 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAA 270
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 99/203 (48%), Gaps = 9/203 (4%)
Query: 105 HSPESYDMMVDILGRMKVMDKLRDLLDQM---RCEGSIITLNTIAKVMRRFVGAGQWADA 161
H P Y +++ L +M + +LL +M + ++ N I + R G A
Sbjct: 41 HQP--YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAI---IDRLCKDGHHIHA 95
Query: 162 VRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHG 220
+F ++ G+ + + + ++D+ C+ A Q+ ++ ++ I P+ TF+ I+
Sbjct: 96 QNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINA 155
Query: 221 WCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPN 280
K +V EA +M G P I+Y+++I +C + + +LD M ++ CSP+
Sbjct: 156 LVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPD 215
Query: 281 VVTYTIIMCALAKAEKFDEALQV 303
VVT++ ++ KA++ D +++
Sbjct: 216 VVTFSTLINGYCKAKRVDNGMEI 238
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 144 TIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL 203
T + ++ V G+ ++A I+ D+ G+ T + N ++D CK++ + A+++ +
Sbjct: 148 TFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSM 207
Query: 204 -KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNF 262
+ +P+ TF+ I+G+CK +RV+ EM G ++Y+T+I +C +
Sbjct: 208 ASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDL 267
Query: 263 SKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+LL+ M + +PN +T+ ++ +L ++ +A ++E
Sbjct: 268 DAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILE 310
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/176 (19%), Positives = 85/176 (48%), Gaps = 3/176 (1%)
Query: 104 QHSPE--SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADA 161
Q +P+ ++ +++ L + + + ++ M G T T ++ F + DA
Sbjct: 141 QINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDA 200
Query: 162 VRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHG 220
R+ D + + + + + L++ CK + V+ +I+ E+ ++ I N T+ IHG
Sbjct: 201 KRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 260
Query: 221 WCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQD 276
+C++ ++ A + M G P I++ +++ C+++ K + +L+++Q +
Sbjct: 261 FCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSE 316
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 97/193 (50%), Gaps = 1/193 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y +++D L + + D + L+ +M G I + G A +FD +
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGM 373
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRV 227
GL ++ L++ C+E+ V Q ++ +E+K+ +I + +T+ + G C +
Sbjct: 374 IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL 433
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
+ A+ ++EM GCRP V+ Y+T+I+ + F +L EM+ Q +P++ Y +
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493
Query: 288 MCALAKAEKFDEA 300
+ L+KA++ DEA
Sbjct: 494 IIGLSKAKRMDEA 506
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 79/151 (52%), Gaps = 1/151 (0%)
Query: 156 GQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTF 214
G+ +A + + G+ + ++ +L++ L K + V+ A +I+ E++ + IAP+ ++
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630
Query: 215 NIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQA 274
+ I+G+ K+ +++A EM G P VI Y+ ++ +C K ELLDEM
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
Query: 275 QDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+ PN VTY I+ K+ EA ++ +
Sbjct: 691 KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 8/174 (4%)
Query: 127 RDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDT 186
R ++DQ G + T +M + DA IF +++ G+ + S +L++
Sbjct: 581 RSMVDQ----GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636
Query: 187 LCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPC 245
K +++A I+ E+ ++ + PN +N+ + G+C+ +E+A + EM G P
Sbjct: 637 FSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Query: 246 VISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM---CALAKAEK 296
++Y TII YC + ++ + L DEM+ + P+ YT ++ C L E+
Sbjct: 697 AVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 750
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 13/204 (6%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
Y+M++ R ++K ++LLD+M +G T ++ + +G A+A R+FD+++
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEE 229
GL ++ L+D C+ VE+A I+ K+ A + FN I+ K + E
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTEL 784
Query: 230 AHWTIQE-MKG----YGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
+ M G +G +P ++Y+ +I C E N EL +MQ + P V+TY
Sbjct: 785 KTEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 285 TIIMCALAKAEK-------FDEAL 301
T ++ K + FDEA+
Sbjct: 844 TSLLNGYDKMGRRAEMFPVFDEAI 867
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 102/199 (51%), Gaps = 3/199 (1%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVR-IFDD 167
+YD+++D L ++K ++ + LL +M G + +T + ++ + G+ ADA + + +
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLL-KGRNADAAKGLVHE 337
Query: 168 LQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRR 226
+ + G+ + + + KE +E+A+ ++ + + P A + I G+C+ +
Sbjct: 338 MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397
Query: 227 VEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTI 286
V + + + EMK +Y T+++ C+ + Y ++ EM A C PNVV YT
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 457
Query: 287 IMCALAKAEKFDEALQVIE 305
++ + +F +A++V++
Sbjct: 458 LIKTFLQNSRFGDAMRVLK 476
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 96/204 (47%), Gaps = 1/204 (0%)
Query: 102 NFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADA 161
N SP +Y +V + +D +++ +M G + +++ F+ ++ DA
Sbjct: 412 NIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDA 471
Query: 162 VRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHG 220
+R+ +++ G+ + N L+ L K + +++AR +E+ ++ + PNA T+ FI G
Sbjct: 472 MRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531
Query: 221 WCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPN 280
+ + A ++EM+ G P + + +I YC + + M Q +
Sbjct: 532 YIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGD 591
Query: 281 VVTYTIIMCALAKAEKFDEALQVI 304
TYT++M L K +K D+A ++
Sbjct: 592 AKTYTVLMNGLFKNDKVDDAEEIF 615
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 92/200 (46%), Gaps = 2/200 (1%)
Query: 108 ESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDD 167
++Y ++++ L + +D ++ +MR +G + + ++ F G A IFD+
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 168 LQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRR 226
+ GL N N+LL C+ +E+A+++ E+ + + PNA T+ I G+CK
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 227 VEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTI 286
+ EA EMK G P Y+T++ C + + + + C+ + +
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKGCASSTAPFNA 771
Query: 287 IMCALAKAEKFDEALQVIER 306
++ + K K + +V+ R
Sbjct: 772 LINWVFKFGKTELKTEVLNR 791
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 70/138 (50%), Gaps = 6/138 (4%)
Query: 174 EKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHW 232
+ N + N+++D LCKE +E A++++ +++ ++ P T+ ++G+ K+ R E
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 233 TIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQD-----CSPNVVTYTII 287
E G P I YS II + E +K L+D+M A++ C ++ T +
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRAL 921
Query: 288 MCALAKAEKFDEALQVIE 305
+ AK + + A +V+E
Sbjct: 922 LSGFAKVGEMEVAEKVME 939
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 113/254 (44%), Gaps = 19/254 (7%)
Query: 70 HLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDL 129
HL + +L + + D+ +L F WA + HS E++ +++ L + + +
Sbjct: 78 HLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESI 137
Query: 130 LDQMRCEGSI------------------ITLNTIAKVMRRFVGAGQWADAVRIFDDLQTL 171
L + G + T + + F ++ +A F ++
Sbjct: 138 LRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDY 197
Query: 172 GLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEA 230
G ES N + +L + V+ A + Y E+++ I+PN +T N+ + G+C+ ++++
Sbjct: 198 GFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKG 257
Query: 231 HWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCA 290
+Q+M+ G R +SY+T+I +C + S +L + M PNVVT+ ++
Sbjct: 258 IELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHG 317
Query: 291 LAKAEKFDEALQVI 304
+A K EA +V
Sbjct: 318 FCRAMKLQEASKVF 331
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 127/283 (44%), Gaps = 28/283 (9%)
Query: 45 SKVAKGSSEEEIIRSLCNDQACDAIHLSPNLINILLRRYKD-DWKSAL--GLFKWASLHS 101
+K K S E I+R + + D L + + LL Y++ D + LFK +
Sbjct: 126 TKNRKFKSAESILRDVLVNGGVD---LPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLK 182
Query: 102 NFQHSPESYDMMVD----------------ILGRMKVMDKLRDLLDQMRCEGSIITLN-- 143
F+++ +++ M D +LG+ +V LR + RC+ I+ N
Sbjct: 183 KFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCK---ISPNPY 239
Query: 144 TIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY-LE 202
T+ VM + +G+ + + D++ LG S N L+ C++ + A ++ +
Sbjct: 240 TLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMM 299
Query: 203 LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNF 262
K + PN TFN IHG+C+ +++EA EMK P ++Y+T+I Y + +
Sbjct: 300 GKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDH 359
Query: 263 SKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+ ++M +++TY ++ L K K +A Q ++
Sbjct: 360 EMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVK 402
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 91/181 (50%), Gaps = 4/181 (2%)
Query: 125 KLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLL 184
KL++++ + + +++T NT+ + F A + +A ++F +++ + + NT + N L+
Sbjct: 294 KLKNMMGKSGLQPNVVTFNTL---IHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 185 DTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCR 243
+ ++ E A + Y ++ I + T+N I G CK + +A ++E+
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 244 PCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
P ++S +I C +N + +EL M C PN T+ +++ A + E FD A QV
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQV 470
Query: 304 I 304
+
Sbjct: 471 L 471
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 10/139 (7%)
Query: 138 SIITLNTIAKVMRRFVGAGQWAD---AVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVE 194
+ +T NT+ G Q D A R ++D+ G++++ + N L+ LCK+
Sbjct: 342 NTVTYNTLIN------GYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTR 395
Query: 195 QARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTII 253
+A Q EL K+++ PN+ TF+ I G C + + + M GC P +++ ++
Sbjct: 396 KAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLV 455
Query: 254 QCYCNEQNFSKVYELLDEM 272
+C ++F ++L EM
Sbjct: 456 SAFCRNEDFDGASQVLREM 474
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 113/254 (44%), Gaps = 19/254 (7%)
Query: 70 HLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDL 129
HL + +L + + D+ +L F WA + HS E++ +++ L + + +
Sbjct: 78 HLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESI 137
Query: 130 LDQMRCEGSI------------------ITLNTIAKVMRRFVGAGQWADAVRIFDDLQTL 171
L + G + T + + F ++ +A F ++
Sbjct: 138 LRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDY 197
Query: 172 GLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEA 230
G ES N + +L + V+ A + Y E+++ I+PN +T N+ + G+C+ ++++
Sbjct: 198 GFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKG 257
Query: 231 HWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCA 290
+Q+M+ G R +SY+T+I +C + S +L + M PNVVT+ ++
Sbjct: 258 IELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHG 317
Query: 291 LAKAEKFDEALQVI 304
+A K EA +V
Sbjct: 318 FCRAMKLQEASKVF 331
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 127/283 (44%), Gaps = 28/283 (9%)
Query: 45 SKVAKGSSEEEIIRSLCNDQACDAIHLSPNLINILLRRYKD-DWKSAL--GLFKWASLHS 101
+K K S E I+R + + D L + + LL Y++ D + LFK +
Sbjct: 126 TKNRKFKSAESILRDVLVNGGVD---LPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLK 182
Query: 102 NFQHSPESYDMMVD----------------ILGRMKVMDKLRDLLDQMRCEGSIITLN-- 143
F+++ +++ M D +LG+ +V LR + RC+ I+ N
Sbjct: 183 KFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCK---ISPNPY 239
Query: 144 TIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY-LE 202
T+ VM + +G+ + + D++ LG S N L+ C++ + A ++ +
Sbjct: 240 TLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMM 299
Query: 203 LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNF 262
K + PN TFN IHG+C+ +++EA EMK P ++Y+T+I Y + +
Sbjct: 300 GKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDH 359
Query: 263 SKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+ ++M +++TY ++ L K K +A Q ++
Sbjct: 360 EMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVK 402
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 91/181 (50%), Gaps = 4/181 (2%)
Query: 125 KLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLL 184
KL++++ + + +++T NT+ + F A + +A ++F +++ + + NT + N L+
Sbjct: 294 KLKNMMGKSGLQPNVVTFNTL---IHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 185 DTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCR 243
+ ++ E A + Y ++ I + T+N I G CK + +A ++E+
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 244 PCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
P ++S +I C +N + +EL M C PN T+ +++ A + E FD A QV
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQV 470
Query: 304 I 304
+
Sbjct: 471 L 471
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 10/139 (7%)
Query: 138 SIITLNTIAKVMRRFVGAGQWAD---AVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVE 194
+ +T NT+ G Q D A R ++D+ G++++ + N L+ LCK+
Sbjct: 342 NTVTYNTLIN------GYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTR 395
Query: 195 QARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTII 253
+A Q EL K+++ PN+ TF+ I G C + + + M GC P +++ ++
Sbjct: 396 KAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLV 455
Query: 254 QCYCNEQNFSKVYELLDEM 272
+C ++F ++L EM
Sbjct: 456 SAFCRNEDFDGASQVLREM 474
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 106/210 (50%), Gaps = 7/210 (3%)
Query: 99 LHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEG---SIITLNTIAKVMRRFVGA 155
+ S ++ + Y+ ++D L + ++ +LL++M +G ++T NT+ + +
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTL---LTGLCYS 224
Query: 156 GQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTF 214
G+W+DA R+ D+ + + + L+D K+ +++A+++Y E+ Q + PN T+
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 215 NIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQA 274
N I+G C R+ +A T M GC P V++Y+T+I +C + + +L M
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 275 QDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+ + ++ TY ++ + K AL +
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIF 374
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 81/172 (47%), Gaps = 4/172 (2%)
Query: 136 EGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC-KEEFVE 194
E +++ NT+ + + G+ A+ + ++++ GL + + N LL LC + +
Sbjct: 173 EPNVVVYNTLIDGLCK---NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 195 QARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQ 254
AR + +K+ I P+ TF I + K ++EA +EM P ++Y++II
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 255 CYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
C + D M ++ C PNVVTY ++ K DE +++ +R
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 68/138 (49%), Gaps = 1/138 (0%)
Query: 168 LQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRR 226
++ G+ + S +L+ C+ + A + ++ K P+ TF +HG+C + R
Sbjct: 97 MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNR 156
Query: 227 VEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTI 286
+ +A + M G P V+ Y+T+I C + ELL+EM+ + +VVTY
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216
Query: 287 IMCALAKAEKFDEALQVI 304
++ L + ++ +A +++
Sbjct: 217 LLTGLCYSGRWSDAARML 234
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 1/141 (0%)
Query: 161 AVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQ-IYLELKQHIAPNAHTFNIFIH 219
A+ + + LG E + + LL C + A + L +K PN +N I
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLID 184
Query: 220 GWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSP 279
G CK + A + EM+ G V++Y+T++ C +S +L +M + +P
Sbjct: 185 GLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP 244
Query: 280 NVVTYTIIMCALAKAEKFDEA 300
+VVT+T ++ K DEA
Sbjct: 245 DVVTFTALIDVFVKQGNLDEA 265
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 93/212 (43%), Gaps = 7/212 (3%)
Query: 99 LHSNFQHSPESYDMMVDIL---GRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGA 155
+ S+ + +Y+ +++ L GR+ K DL+ C +++T NT+ +F
Sbjct: 273 IQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKF--- 329
Query: 156 GQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYL-ELKQHIAPNAHTF 214
+ +++F + G + + N L+ C+ + A I+ + + + P+ T
Sbjct: 330 RMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITH 389
Query: 215 NIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQA 274
I +HG C +E A +M+ +++Y+ +I C K +EL +
Sbjct: 390 CILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPV 449
Query: 275 QDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+ P+ TYTI++ L K EA ++I R
Sbjct: 450 EGVKPDARTYTIMILGLCKNGPRREADELIRR 481
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 1/175 (0%)
Query: 127 RDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDT 186
++L +M +G + T ++ F +G+W+DA ++ + + + + + L++
Sbjct: 30 QNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINA 89
Query: 187 LCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPC 245
KE V +A +IY E L+ I P T+N I G+CK RV++A + M GC P
Sbjct: 90 FVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPD 149
Query: 246 VISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
V+++ST+I YC + E+ EM + N VTYT ++ + D A
Sbjct: 150 VVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAA 204
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 81/158 (51%), Gaps = 1/158 (0%)
Query: 148 VMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQH 206
++ R G +A +F ++ G+ N + N ++D+ C A Q+ + ++
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 207 IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVY 266
I P+ TF+ I+ + K R+V EA +EM + P I+Y+++I +C +
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135
Query: 267 ELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+LD M ++ CSP+VVT++ ++ KA++ D +++
Sbjct: 136 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 173
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 101/201 (50%), Gaps = 7/201 (3%)
Query: 109 SYDMMVDIL---GRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
+Y+ M+D GR D+L + + + I+T + + + FV + ++A I+
Sbjct: 47 TYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSAL---INAFVKERKVSEAEEIY 103
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKI 224
++ + T + N ++D CK++ V+ A+++ + + +P+ TF+ I+G+CK
Sbjct: 104 KEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKA 163
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
+RV+ EM G ++Y+T+I +C + +LL+EM + +P+ +T+
Sbjct: 164 KRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITF 223
Query: 285 TIIMCALAKAEKFDEALQVIE 305
++ L ++ +A ++E
Sbjct: 224 HCMLAGLCSKKELRKAFAILE 244
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 138 SIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQAR 197
+ IT N++ + F + DA R+ D + + G + + + L++ CK + V+
Sbjct: 114 TTITYNSM---IDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 170
Query: 198 QIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCY 256
+I+ E+ ++ I N T+ IHG+C++ ++ A + EM G P I++ ++
Sbjct: 171 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 230
Query: 257 CNEQNFSKVYELLDEMQ 273
C+++ K + +L+++Q
Sbjct: 231 CSKKELRKAFAILEDLQ 247
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 111/222 (50%), Gaps = 11/222 (4%)
Query: 86 DWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTI 145
D ++AL W S NF+H+ SY +V +L ++ ++ + +I+ + +
Sbjct: 39 DPQTALSFSDWISRIPNFKHNVTSYASLVTLLCSQEIPYEVPKI--------TILMIKSC 90
Query: 146 AKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LK 204
V R + + +R D + + + + N LL +L + VE+ +++Y E L+
Sbjct: 91 NSV-RDALFVVDFCRTMRKGDSFE-IKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLE 148
Query: 205 QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSK 264
++P+ +TFN ++G+CK+ V EA + + GC P +Y++ I +C +
Sbjct: 149 DLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDA 208
Query: 265 VYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+++ EM C N V+YT ++ L +A+K DEAL ++ +
Sbjct: 209 AFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVK 250
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 86/174 (49%), Gaps = 4/174 (2%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
SY ++ L K +D+ LL +M+ + + T ++ G+GQ ++A+ +F +
Sbjct: 227 SYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQM 286
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE--LKQHIAPNAHTFNIFIHGWCKIRR 226
G++ + +L+ + C + +++A + LE L+ + PN T+N I G+CK +
Sbjct: 287 SESGIKPDDCMYTVLIQSFCSGDTLDEASGL-LEHMLENGLMPNVITYNALIKGFCK-KN 344
Query: 227 VEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPN 280
V +A + +M P +I+Y+T+I C+ N Y LL M+ PN
Sbjct: 345 VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 98/215 (45%), Gaps = 7/215 (3%)
Query: 95 KWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMR---CEGSIITLNTIAKVMRR 151
K S ++ +P+ Y+ ++ L R ++++++ L +M I T NT+ +
Sbjct: 108 KGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTL---VNG 164
Query: 152 FVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPN 210
+ G +A + L G + + + + C+ + V+ A +++ E+ Q+ N
Sbjct: 165 YCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRN 224
Query: 211 AHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLD 270
++ I+G + ++++EA + +MK C P V +Y+ +I C S+ L
Sbjct: 225 EVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFK 284
Query: 271 EMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+M P+ YT+++ + + DEA ++E
Sbjct: 285 QMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLE 319
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 66/130 (50%), Gaps = 2/130 (1%)
Query: 176 NTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTI 234
N + +L+D LC +A ++ ++ + I P+ + + I +C ++EA +
Sbjct: 259 NVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLL 318
Query: 235 QEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKA 294
+ M G P VI+Y+ +I+ +C ++N K LL +M Q+ P+++TY ++ +
Sbjct: 319 EHMLENGLMPNVITYNALIKGFC-KKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSS 377
Query: 295 EKFDEALQVI 304
D A +++
Sbjct: 378 GNLDSAYRLL 387
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 2/153 (1%)
Query: 156 GQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL--KQHIAPNAHT 213
G A + +++ G + N + L+D LCK + E+A +++L+L PN HT
Sbjct: 301 GSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHT 360
Query: 214 FNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQ 273
+ I G+CK ++ A MK G P V +Y+T+I +C +F + YEL++ M
Sbjct: 361 YTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMG 420
Query: 274 AQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+ PN+ TY + +L K + EA +++ +
Sbjct: 421 DEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNK 453
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 87/198 (43%), Gaps = 1/198 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y +++ + + +L++ M EG + + T + + +A + +
Sbjct: 395 TYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKA 454
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRV 227
+ GLE + + +L+ CK+ + QA + + K + NI I +C+ +++
Sbjct: 455 FSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKM 514
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
+E+ Q + G P +Y+++I CYC E + + M+ C P+ TY +
Sbjct: 515 KESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSL 574
Query: 288 MCALAKAEKFDEALQVIE 305
+ L K DEA ++ E
Sbjct: 575 ISGLCKKSMVDEACKLYE 592
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 51/251 (20%)
Query: 90 ALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVM 149
AL F WA F+H Y + D L + K ++ MRC ++
Sbjct: 110 ALCFFYWAVGFEKFRHFMRLYLVTADSLLANGNLQKAHEV---MRC------------ML 154
Query: 150 RRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIA 208
R F G+ +AV + D+Q GL ++ +MN +L+ + +E A ++ E+ + +
Sbjct: 155 RNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVV 214
Query: 209 PNAHTFNIFIHG------------W-----------------------CKIRRVEEAHWT 233
P++ ++ + + G W C+ V A W
Sbjct: 215 PDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWY 274
Query: 234 IQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAK 293
++M G +P +I+++++I C + + + +E+L+EM PNV T+T ++ L K
Sbjct: 275 FRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCK 334
Query: 294 AEKFDEALQVI 304
++A ++
Sbjct: 335 RGWTEKAFRLF 345
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 102 NFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADA 161
F+ + ++ ++D L + + + ++L++M G + T ++ G A
Sbjct: 282 GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKA 341
Query: 162 VRIFDDL-QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIH 219
R+F L ++ + N + ++ CKE+ + +A ++ +K Q + PN +T+ I+
Sbjct: 342 FRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 401
Query: 220 GWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSP 279
G CK A+ + M G P + +Y+ I C + + YELL++ +
Sbjct: 402 GHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEA 461
Query: 280 NVVTYTIIMCALAKAEKFDEAL 301
+ VTYTI++ K ++AL
Sbjct: 462 DGVTYTILIQEQCKQNDINQAL 483
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 90/205 (43%), Gaps = 4/205 (1%)
Query: 106 SPESYDM--MVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVR 163
+P S M +++I + +++ ++ D+M G + ++ ++ G+ +A R
Sbjct: 179 TPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADR 238
Query: 164 IFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWC 222
+ G + + L+L LC+ V +A + ++ PN F I G C
Sbjct: 239 WLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLC 298
Query: 223 KIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDC-SPNV 281
K +++A ++EM G +P V +++ +I C K + L ++ D PNV
Sbjct: 299 KKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNV 358
Query: 282 VTYTIIMCALAKAEKFDEALQVIER 306
TYT ++ K +K + A + R
Sbjct: 359 HTYTSMIGGYCKEDKLNRAEMLFSR 383
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 112/262 (42%), Gaps = 46/262 (17%)
Query: 86 DWKSALG---LFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITL 142
D KSA G F+WAS F HS +Y + L + D + LLD+M +
Sbjct: 52 DQKSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPD 111
Query: 143 NTI-AKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY- 200
+ I ++R F A + + D + G++ + + N +LD L KE+ ++ AR+ +
Sbjct: 112 DAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKED-IDIAREFFT 170
Query: 201 ---------------------LELKQHI---------------APNAHTFNIFIHGWCKI 224
L L I APNA +N +H CK
Sbjct: 171 RKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKN 230
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
+V A + EMK P ++++ +I YCNEQ + LL++ + P+VVT
Sbjct: 231 GKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTV 286
Query: 285 TIIMCALAKAEKFDEALQVIER 306
T +M L + EAL+V+ER
Sbjct: 287 TKVMEVLCNEGRVSEALEVLER 308
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 116/245 (47%), Gaps = 14/245 (5%)
Query: 63 DQACDAIHLSPN-LINILLRRYKDDWKSALGLFKWASLHSNFQHSP--ESYDMMVDILGR 119
D+ D+I L P+ I + + R + + L S F P + ++ ++D+L +
Sbjct: 100 DEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVK 159
Query: 120 MKVMDKLRDLLD-QMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTE 178
+ D R+ +M G + T +M+ + D ++ ++T G+ N
Sbjct: 160 EDI-DIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAV 218
Query: 179 SMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMK 238
N LL LCK V +AR + E+K+ PN TFNI I +C +++ ++ +++
Sbjct: 219 VYNTLLHALCKNGKVGRARSLMSEMKE---PNDVTFNILISAYCNEQKLIQSMVLLEKCF 275
Query: 239 GYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM---CALAK-- 293
G P V++ + +++ CNE S+ E+L+ ++++ +VV ++ CAL K
Sbjct: 276 SLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMR 335
Query: 294 -AEKF 297
A++F
Sbjct: 336 VAQRF 340
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/216 (18%), Positives = 96/216 (44%), Gaps = 9/216 (4%)
Query: 94 FKWASLHSNFQHSPES--YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRR 151
FK + +P + Y+ ++ L + + + R L+ +M+ E + +T N + +
Sbjct: 202 FKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK-EPNDVTFNIL---ISA 257
Query: 152 FVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNA 211
+ + ++ + + +LG + ++ +++ LC E V +A ++ LE +
Sbjct: 258 YCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEV-LERVESKGGKV 316
Query: 212 HTF--NIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELL 269
N + G+C + ++ A EM+ G P V +Y+ +I YC+ +
Sbjct: 317 DVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTF 376
Query: 270 DEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
++M+ N T+ ++ L+ + D+ L+++E
Sbjct: 377 NDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILE 412
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 100/198 (50%), Gaps = 1/198 (0%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
++ ++D L + + +D +L +M +G + T + ++ G+W+DA ++ D+
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVE 228
+ N + N L+D KE +A ++Y ++ K+ I P+ T+N ++G+C R++
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
+A + M C P V++Y+T+I+ +C + EL EM + + VTYT ++
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 289 CALAKAEKFDEALQVIER 306
L D A +V ++
Sbjct: 443 QGLFHDGDCDNAQKVFKQ 460
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 138/285 (48%), Gaps = 17/285 (5%)
Query: 30 QEQCQSLMRSVDILTSKVAKGSSEEEIIRSLCNDQACDAIHLSPNLINILLR-----RYK 84
Q CQ + + ++ + + K + ++ +L N I + N ++ R+
Sbjct: 218 QRGCQPNLVTYGVVVNGLCK-RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 276
Query: 85 DDWKSALGLFKWASLHSNFQHSPESYDMMVDIL---GRMKVMDKLRDLLDQMRCEGSIIT 141
DD AL LFK + + +Y ++ L GR +L + + + +++T
Sbjct: 277 DD---ALNLFKEMETKG-IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 332
Query: 142 LNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY- 200
N + + FV G++ +A +++DD+ ++ + + N L++ C + +++A+Q++
Sbjct: 333 FNAL---IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 389
Query: 201 LELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQ 260
+ + P+ T+N I G+CK +RVE+ +EM G ++Y+T+IQ ++
Sbjct: 390 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 449
Query: 261 NFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+ ++ +M + P+++TY+I++ L K ++AL+V +
Sbjct: 450 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 494
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 1/173 (0%)
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
L+DQM G T ++ + ++AV + D + G + N + ++++ LC
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 189 KEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
K + A + +++ I + FN I CK R V++A +EM+ G RP V+
Sbjct: 237 KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 296
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
+YS++I C C+ +S +LL +M + +PN+VT+ ++ A K KF EA
Sbjct: 297 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 349
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 1/178 (0%)
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
L+D+M G L T V+ G A+ + + ++ +E + N ++D+LC
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLC 271
Query: 189 KEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
K V+ A ++ E++ + I PN T++ I C R +A + +M P ++
Sbjct: 272 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 331
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+++ +I + E F + +L D+M + P++ TY ++ ++ D+A Q+ E
Sbjct: 332 TFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 389
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 104/230 (45%), Gaps = 4/230 (1%)
Query: 79 LLRRYKDDWK--SALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCE 136
+LR D K A+GLF + S S ++ ++ + +MK D + L ++M+
Sbjct: 56 ILRNGLHDMKLDDAIGLF-GGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 114
Query: 137 GSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQA 196
+ L T ++ F Q + A+ + + LG E + +++ LL+ C + + A
Sbjct: 115 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 197 RQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQC 255
+ ++ + P+ TF IHG + EA + M GC+P +++Y ++
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 256 YCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
C + LL++M+A +VV + I+ +L K D+AL + +
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 284
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 92/190 (48%), Gaps = 2/190 (1%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+ ++ + K ++ +L +M G + T +++ G +A ++F +
Sbjct: 402 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 461
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRV 227
+ G+ + + ++LLD LC +E+A +++ + K I + + + I G CK +V
Sbjct: 462 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 521
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY-TI 286
++ + G +P V++Y+T+I C+++ + Y LL +M+ PN TY T+
Sbjct: 522 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTL 581
Query: 287 IMCALAKAEK 296
I L +K
Sbjct: 582 IRAHLRDGDK 591
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 82/170 (48%), Gaps = 4/170 (2%)
Query: 138 SIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQAR 197
SI+ N K++ ++ + + + +Q L + + N+L++ C+ + A
Sbjct: 84 SIVEFN---KLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLAL 140
Query: 198 QIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCY 256
+ ++ K P+ T + ++G+C +R+ +A + +M G RP I+++T+I
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 257 CNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
S+ L+D M + C PN+VTY +++ L K D AL ++ +
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNK 250
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 76/152 (50%), Gaps = 1/152 (0%)
Query: 124 DKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLL 183
D + + QM +G + T + ++ G+ A+ +FD +Q ++ + +
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 184 LDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGC 242
++ +CK V+ ++ L + + PN T+N I G C R ++EA+ +++MK G
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 571
Query: 243 RPCVISYSTIIQCYCNEQNFSKVYELLDEMQA 274
P +Y+T+I+ + + + + EL+ EM++
Sbjct: 572 LPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Query: 144 TIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL 203
T + ++ F + DAV + ++ +G++++ +L+DTLCK V A ++ +
Sbjct: 15 TASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRM 74
Query: 204 K-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNF 262
K + I+PN T++ I G CK R+ +A + EM P VI++S +I Y
Sbjct: 75 KDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKL 134
Query: 263 SKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
SKV + M PNV TY+ ++ L + DEA+++++
Sbjct: 135 SKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLD 177
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 94/193 (48%), Gaps = 1/193 (0%)
Query: 112 MMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTL 171
+++D L + +++ ++L +M+ G + T + ++ +G+ ADA R ++ +
Sbjct: 53 ILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSK 112
Query: 172 GLEKNTESMNLLLDTLCKEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGWCKIRRVEEA 230
+ N + + L+D K + + +Y + ++ I PN T++ I+G C RV+EA
Sbjct: 113 KINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEA 172
Query: 231 HWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCA 290
+ M GC P V++YST+ + +LLD+M + + N V+ ++
Sbjct: 173 IKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKG 232
Query: 291 LAKAEKFDEALQV 303
+A K D AL V
Sbjct: 233 YFQAGKIDLALGV 245
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 84/177 (47%), Gaps = 4/177 (2%)
Query: 125 KLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLL 184
K+ DL+ C +++T +T+A F + + D +++ DD+ G+ NT S N L+
Sbjct: 174 KMLDLMISKGCTPNVVTYSTLAN---GFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLI 230
Query: 185 DTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCR 243
+ ++ A ++ + + + PN ++NI + G VE+A + M+
Sbjct: 231 KGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRND 290
Query: 244 PCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
+I+Y+ +I C + Y+L +++ + P+ YTI++ L +A EA
Sbjct: 291 LDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA 347
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 51/98 (52%)
Query: 203 LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNF 262
+K I P+ T + ++G+C +++A + +M+ G + V+ + +I C +
Sbjct: 5 MKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLV 64
Query: 263 SKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
E+L M+ + SPNVVTY+ ++ L K+ + +A
Sbjct: 65 VPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADA 102
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 4/168 (2%)
Query: 140 ITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQI 199
+T NT+ + +G+W DA R+ D+ ++ N L+DT KE + +AR +
Sbjct: 220 VTYNTLISGLS---NSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNL 276
Query: 200 YLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCN 258
Y E+ ++ + PN T+N I+G+C + +A + M GC P V++Y+T+I +C
Sbjct: 277 YKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCK 336
Query: 259 EQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+ +L EM Q + TY ++ +A K + A +V R
Sbjct: 337 SKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 384
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 93/192 (48%), Gaps = 1/192 (0%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
+ ++D + + + R+L +M + + T ++ F G DA +FD +
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVE 228
+ G + + N L+ CK + VE +++ E+ Q + +A T+N IHG+C+ ++
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
A M G P +++Y+ ++ C CN K +++++Q + +++TY II+
Sbjct: 377 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 436
Query: 289 CALAKAEKFDEA 300
L + +K EA
Sbjct: 437 QGLCRTDKLKEA 448
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 4/149 (2%)
Query: 138 SIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQAR 197
SI+TL ++ + F ++ +AV + D + G N N +++ LCK + A
Sbjct: 148 SIVTLGSL---LNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNAL 204
Query: 198 QIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCY 256
+++ + K+ I +A T+N I G R +A +++M P VI ++ +I +
Sbjct: 205 EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 264
Query: 257 CNEQNFSKVYELLDEMQAQDCSPNVVTYT 285
E N + L EM + PNV TY
Sbjct: 265 VKEGNLLEARNLYKEMIRRSVVPNVFTYN 293
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 83/174 (47%), Gaps = 4/174 (2%)
Query: 132 QMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEE 191
Q R SI+ + V+ + ++ + ++ ++ LG+ + S +L+ C+
Sbjct: 72 QSRPIPSIVDFTRVLTVIAKM---NKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCS 128
Query: 192 FVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYS 250
+ A + ++ K P+ T ++G+C+ R +EA + M G+G P V+ Y+
Sbjct: 129 RLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYN 188
Query: 251 TIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
T+I C ++ + E+ M+ + + VTY ++ L+ + ++ +A +++
Sbjct: 189 TVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 75/152 (49%), Gaps = 1/152 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+ ++ + K ++ L +M +G + T ++ + AG+ A ++F+ +
Sbjct: 326 TYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM 385
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRV 227
G+ + + N+LLD LC +E+A + +L K + + T+NI I G C+ ++
Sbjct: 386 VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKL 445
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNE 259
+EA + + G +P I+Y T+I C +
Sbjct: 446 KEAWCLFRSLTRKGVKPDAIAYITMISGLCRK 477
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
Query: 168 LQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRR 226
+ LG + ++ LL+ C+ ++A + + PN +N I+G CK R
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 227 VEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTI 286
+ A M+ G R ++Y+T+I N ++ LL +M + PNV+ +T
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259
Query: 287 IMCALAKAEKFDEA 300
++ K EA
Sbjct: 260 LIDTFVKEGNLLEA 273
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 120/243 (49%), Gaps = 8/243 (3%)
Query: 71 LSPNLINILLRRYKDDWKSALGLFKWAS-LHSNFQHSPESYDMMVDILGRMKVMDKLRDL 129
L+P+L++ +L++ K+ +AL LF+ A ++ H+ Y M+DILG+ + +++ +
Sbjct: 10 LTPSLLSQILKKQKNP-VTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYV 68
Query: 130 LDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCK 189
+++M+ + + A V+R F AG+ DA+ +F L + S + LL + K
Sbjct: 69 IERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVK 128
Query: 190 EEFVEQARQIYLE--LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
E +E A I+ + + N+ + C++ R + A QEM GC P
Sbjct: 129 ESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRD 188
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEM----QAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
SY +++ +C E + LL M + ++V Y I++ AL A + D+A+++
Sbjct: 189 SYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEI 248
Query: 304 IER 306
+ +
Sbjct: 249 LGK 251
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 111/260 (42%), Gaps = 18/260 (6%)
Query: 49 KGSSEEEIIRSLCNDQACDAIHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPE 108
KGS E+ ++ + D CDA + + I IL + + K+ K H H
Sbjct: 220 KGSGEDIVVYRILLDALCDAGEVD-DAIEILGKILRKGLKAP----KRCYHHIEAGHWES 274
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
S + + ++++ LL + G+I L++ + + G+ + + +
Sbjct: 275 SSEGI----------ERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAM 324
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE--LKQHIAPNAHTFNIFIHGWCKIRR 226
++ G E + LC+ +++A + + ++ H P +N+ I G C +
Sbjct: 325 RSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGK 384
Query: 227 VEEAHWTIQEM-KGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYT 285
EA +++M K C +Y T++ C + F + ++++EM + P V TY
Sbjct: 385 SMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYH 444
Query: 286 IIMCALAKAEKFDEALQVIE 305
+++ L ++ EA+ +E
Sbjct: 445 MMIKGLCDMDRRYEAVMWLE 464
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 120/243 (49%), Gaps = 8/243 (3%)
Query: 71 LSPNLINILLRRYKDDWKSALGLFKWAS-LHSNFQHSPESYDMMVDILGRMKVMDKLRDL 129
L+P+L++ +L++ K+ +AL LF+ A ++ H+ Y M+DILG+ + +++ +
Sbjct: 10 LTPSLLSQILKKQKNP-VTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYV 68
Query: 130 LDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCK 189
+++M+ + + A V+R F AG+ DA+ +F L + S + LL + K
Sbjct: 69 IERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVK 128
Query: 190 EEFVEQARQIYLE--LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
E +E A I+ + + N+ + C++ R + A QEM GC P
Sbjct: 129 ESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRD 188
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEM----QAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
SY +++ +C E + LL M + ++V Y I++ AL A + D+A+++
Sbjct: 189 SYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEI 248
Query: 304 IER 306
+ +
Sbjct: 249 LGK 251
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 111/260 (42%), Gaps = 18/260 (6%)
Query: 49 KGSSEEEIIRSLCNDQACDAIHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPE 108
KGS E+ ++ + D CDA + + I IL + + K+ K H H
Sbjct: 220 KGSGEDIVVYRILLDALCDAGEVD-DAIEILGKILRKGLKAP----KRCYHHIEAGHWES 274
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
S + + ++++ LL + G+I L++ + + G+ + + +
Sbjct: 275 SSEGI----------ERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAM 324
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE--LKQHIAPNAHTFNIFIHGWCKIRR 226
++ G E + LC+ +++A + + ++ H P +N+ I G C +
Sbjct: 325 RSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGK 384
Query: 227 VEEAHWTIQEM-KGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYT 285
EA +++M K C +Y T++ C + F + ++++EM + P V TY
Sbjct: 385 SMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYH 444
Query: 286 IIMCALAKAEKFDEALQVIE 305
+++ L ++ EA+ +E
Sbjct: 445 MMIKGLCDMDRRYEAVMWLE 464
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 96/186 (51%), Gaps = 4/186 (2%)
Query: 121 KVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESM 180
+ M ++L +++ ++T NT+ K + R G D + IF++L+ G E + S
Sbjct: 175 EAMKTFKELPEKLGITPDLVTYNTMIKALCR---KGSMDDILSIFEELEKNGFEPDLISF 231
Query: 181 NLLLDTLCKEE-FVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKG 239
N LL+ + E FVE R L ++++PN ++N + G + ++ +A I MK
Sbjct: 232 NTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKT 291
Query: 240 YGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDE 299
G P V +Y+ +I Y + N +V + +EM+ + +P+ VTY +++ L K D
Sbjct: 292 EGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDR 351
Query: 300 ALQVIE 305
A++V E
Sbjct: 352 AVEVSE 357
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 105/238 (44%), Gaps = 13/238 (5%)
Query: 76 INILLRRYKDDWKSALGLFKWASLHSNFQHSPE--SYDMMVDILGRMKVMDKLRDLLDQM 133
N LL Y + K + + L +P+ +Y+ M+ L R MD + + +++
Sbjct: 160 FNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEEL 219
Query: 134 RCEG---SIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCK- 189
G +I+ NT+ + F + + RI+D +++ L N S N + L +
Sbjct: 220 EKNGFEPDLISFNTL---LEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRN 276
Query: 190 EEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISY 249
++F + I + + I+P+ HT+N I + +EE EMK G P ++Y
Sbjct: 277 KKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTY 336
Query: 250 STIIQCYCNEQNFSKVYELLDEMQAQD--CSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+I C + + + E+ +E PN+ Y ++ L A K DEA Q+++
Sbjct: 337 CMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNM--YKPVVERLMGAGKIDEATQLVK 392
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 103/203 (50%), Gaps = 5/203 (2%)
Query: 106 SPE--SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLN-TIAKVMRRFVGAGQWADAV 162
SP+ +Y +++ L ++ D L D+M C+ I+ + T ++ G +A
Sbjct: 395 SPDLVAYSIVIHGLCKLGKFDMALWLYDEM-CDKRILPNSRTHGALLLGLCQKGMLLEAR 453
Query: 163 RIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGW 221
+ D L + G + N+++D K +E+A +++ + ++ I P+ TFN I+G+
Sbjct: 454 SLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGY 513
Query: 222 CKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNV 281
CK + + EA + +K YG P V+SY+T++ Y N N + EL EM+A+ P
Sbjct: 514 CKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTN 573
Query: 282 VTYTIIMCALAKAEKFDEALQVI 304
VTY++I L + K + V+
Sbjct: 574 VTYSVIFKGLCRGWKHENCNHVL 596
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 97/205 (47%), Gaps = 8/205 (3%)
Query: 102 NFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADA 161
N S +SY+ +L + DK+ D+ +++ + +T + V+ + DA
Sbjct: 154 NLNVSTQSYN---SVLYHFRETDKMWDVYKEIKDKNE----HTYSTVVDGLCRQQKLEDA 206
Query: 162 VRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHG 220
V + + + S N ++ CK FV+ A+ + LK + P+ ++ NI I+G
Sbjct: 207 VLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILING 266
Query: 221 WCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPN 280
C + + EA +M +G P ++Y+ + + + S +E++ +M + SP+
Sbjct: 267 LCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPD 326
Query: 281 VVTYTIIMCALAKAEKFDEALQVIE 305
V+TYTI++C + D L +++
Sbjct: 327 VITYTILLCGQCQLGNIDMGLVLLK 351
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 100/236 (42%), Gaps = 49/236 (20%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCE------GSIITLNTIAKVMRRFVGAGQWADAV 162
+Y +VD L R + KL D + +R S+++ N+I M + G A
Sbjct: 189 TYSTVVDGLCRQQ---KLEDAVLFLRTSEWKDIGPSVVSFNSI---MSGYCKLGFVDMAK 242
Query: 163 RIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGW 221
F + GL + S N+L++ LC + +A ++ ++ +H + P++ T+NI G+
Sbjct: 243 SFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGF 302
Query: 222 CKIRRVEEAHWTIQEMKGYGCRPCVISYS------------------------------T 251
+ + A I++M G P VI+Y+ +
Sbjct: 303 HLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNS 362
Query: 252 IIQC------YCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEAL 301
II C C + L ++M+A SP++V Y+I++ L K KFD AL
Sbjct: 363 IIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 418
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 36/174 (20%)
Query: 155 AGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHT 213
G+ +A+ +F+ ++ GL + + ++++ LCK + A +Y E+ + I PN+ T
Sbjct: 376 TGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRT 435
Query: 214 -----------------------------------FNIFIHGWCKIRRVEEAHWTIQEMK 238
+NI I G+ K +EEA + +
Sbjct: 436 HGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVI 495
Query: 239 GYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALA 292
G P V +++++I YC QN ++ ++LD ++ +P+VV+YT +M A A
Sbjct: 496 ETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 549
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 74/144 (51%), Gaps = 2/144 (1%)
Query: 164 IFDDLQTLGLEKNTE-SMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGW 221
+ D+ + G E N+ +++L LCK +++A ++ ++K ++P+ ++I IHG
Sbjct: 349 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGL 408
Query: 222 CKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNV 281
CK+ + + A W EM P ++ ++ C + + LLD + + + ++
Sbjct: 409 CKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDI 468
Query: 282 VTYTIIMCALAKAEKFDEALQVIE 305
V Y I++ AK+ +EAL++ +
Sbjct: 469 VLYNIVIDGYAKSGCIEEALELFK 492
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 96/212 (45%), Gaps = 19/212 (8%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
Y++++D + +++ +L + G ++ T ++ + A+A +I D ++
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKI---- 224
GL + S L+D + ++ E+K + I P T+++ G C+
Sbjct: 531 LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHE 590
Query: 225 --------RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQD 276
R E+ +++M+ G P I+Y+TIIQ C ++ S + L+ M++++
Sbjct: 591 NCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRN 650
Query: 277 CSPNVVTYTIIMCALA------KAEKFDEALQ 302
+ TY I++ +L KA+ F +LQ
Sbjct: 651 LDASSATYNILIDSLCVYGYIRKADSFIYSLQ 682
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 103/203 (50%), Gaps = 5/203 (2%)
Query: 106 SPE--SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLN-TIAKVMRRFVGAGQWADAV 162
SP+ +Y +++ L ++ D L D+M C+ I+ + T ++ G +A
Sbjct: 395 SPDLVAYSIVIHGLCKLGKFDMALWLYDEM-CDKRILPNSRTHGALLLGLCQKGMLLEAR 453
Query: 163 RIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGW 221
+ D L + G + N+++D K +E+A +++ + ++ I P+ TFN I+G+
Sbjct: 454 SLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGY 513
Query: 222 CKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNV 281
CK + + EA + +K YG P V+SY+T++ Y N N + EL EM+A+ P
Sbjct: 514 CKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTN 573
Query: 282 VTYTIIMCALAKAEKFDEALQVI 304
VTY++I L + K + V+
Sbjct: 574 VTYSVIFKGLCRGWKHENCNHVL 596
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 97/205 (47%), Gaps = 8/205 (3%)
Query: 102 NFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADA 161
N S +SY+ +L + DK+ D+ +++ + +T + V+ + DA
Sbjct: 154 NLNVSTQSYN---SVLYHFRETDKMWDVYKEIKDKNE----HTYSTVVDGLCRQQKLEDA 206
Query: 162 VRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHG 220
V + + + S N ++ CK FV+ A+ + LK + P+ ++ NI I+G
Sbjct: 207 VLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILING 266
Query: 221 WCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPN 280
C + + EA +M +G P ++Y+ + + + S +E++ +M + SP+
Sbjct: 267 LCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPD 326
Query: 281 VVTYTIIMCALAKAEKFDEALQVIE 305
V+TYTI++C + D L +++
Sbjct: 327 VITYTILLCGQCQLGNIDMGLVLLK 351
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 100/236 (42%), Gaps = 49/236 (20%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCE------GSIITLNTIAKVMRRFVGAGQWADAV 162
+Y +VD L R + KL D + +R S+++ N+I M + G A
Sbjct: 189 TYSTVVDGLCRQQ---KLEDAVLFLRTSEWKDIGPSVVSFNSI---MSGYCKLGFVDMAK 242
Query: 163 RIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGW 221
F + GL + S N+L++ LC + +A ++ ++ +H + P++ T+NI G+
Sbjct: 243 SFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGF 302
Query: 222 CKIRRVEEAHWTIQEMKGYGCRPCVISYS------------------------------T 251
+ + A I++M G P VI+Y+ +
Sbjct: 303 HLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNS 362
Query: 252 IIQC------YCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEAL 301
II C C + L ++M+A SP++V Y+I++ L K KFD AL
Sbjct: 363 IIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 418
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 36/174 (20%)
Query: 155 AGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHT 213
G+ +A+ +F+ ++ GL + + ++++ LCK + A +Y E+ + I PN+ T
Sbjct: 376 TGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRT 435
Query: 214 -----------------------------------FNIFIHGWCKIRRVEEAHWTIQEMK 238
+NI I G+ K +EEA + +
Sbjct: 436 HGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVI 495
Query: 239 GYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALA 292
G P V +++++I YC QN ++ ++LD ++ +P+VV+YT +M A A
Sbjct: 496 ETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 549
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 74/144 (51%), Gaps = 2/144 (1%)
Query: 164 IFDDLQTLGLEKNTE-SMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGW 221
+ D+ + G E N+ +++L LCK +++A ++ ++K ++P+ ++I IHG
Sbjct: 349 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGL 408
Query: 222 CKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNV 281
CK+ + + A W EM P ++ ++ C + + LLD + + + ++
Sbjct: 409 CKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDI 468
Query: 282 VTYTIIMCALAKAEKFDEALQVIE 305
V Y I++ AK+ +EAL++ +
Sbjct: 469 VLYNIVIDGYAKSGCIEEALELFK 492
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 96/212 (45%), Gaps = 19/212 (8%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
Y++++D + +++ +L + G ++ T ++ + A+A +I D ++
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKI---- 224
GL + S L+D + ++ E+K + I P T+++ G C+
Sbjct: 531 LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHE 590
Query: 225 --------RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQD 276
R E+ +++M+ G P I+Y+TIIQ C ++ S + L+ M++++
Sbjct: 591 NCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRN 650
Query: 277 CSPNVVTYTIIMCALA------KAEKFDEALQ 302
+ TY I++ +L KA+ F +LQ
Sbjct: 651 LDASSATYNILIDSLCVYGYIRKADSFIYSLQ 682
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 105/215 (48%), Gaps = 1/215 (0%)
Query: 90 ALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVM 149
ALG F+ A + +Y +V L ++ +D++RDL+ ++ EG + +
Sbjct: 190 ALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWI 249
Query: 150 RRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIA 208
+ G DA+ ++ G+ ++ S ++L+D L KE VE+A + ++ K+ +
Sbjct: 250 HGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVE 309
Query: 209 PNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYEL 268
PN T+ I G CK+ ++EEA + G Y T+I C + N ++ + +
Sbjct: 310 PNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSM 369
Query: 269 LDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
L +M+ + P+++TY ++ L A + EA +V
Sbjct: 370 LGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV 404
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 80/164 (48%), Gaps = 3/164 (1%)
Query: 140 ITLNTIA--KVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEE-FVEQA 196
+TLNTI ++ G +A+R+FD L+ +GL + + +L+D LCKE F++
Sbjct: 686 VTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAE 745
Query: 197 RQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCY 256
+ + + + + PN +N + G+CK+ + E+A + P + S++I+ Y
Sbjct: 746 KLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGY 805
Query: 257 CNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
C + + + + E + ++ S + + ++ + +EA
Sbjct: 806 CKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEA 849
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 92/193 (47%), Gaps = 6/193 (3%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
SY +++D L + +++ LL +M EG L T ++R G+ +A +F+ +
Sbjct: 279 SYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRI 338
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRV 227
++G+E + L+D +C++ + +A + +++Q I P+ T+N I+G C RV
Sbjct: 339 LSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRV 398
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
EA + + G VI+YST++ Y QN V E+ ++V I+
Sbjct: 399 SEADEVSKGVVG-----DVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNIL 453
Query: 288 MCALAKAEKFDEA 300
+ A + EA
Sbjct: 454 LKAFLLMGAYGEA 466
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 181 NLLLDTLCKEEFVEQARQI-YLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKG 239
++++ LCKE F+ +A + + + N T+N I+G C+ + EA ++
Sbjct: 659 TIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLEN 718
Query: 240 YGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDE 299
G P ++Y +I C E F +LLD M ++ PN++ Y I+ K + ++
Sbjct: 719 IGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTED 778
Query: 300 ALQVIER 306
A++V+ R
Sbjct: 779 AMRVVSR 785
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 2/163 (1%)
Query: 146 AKVMRRFVGAGQWADAVRIFDDLQTLG-LEKNTESMNLLLDTLCKEEFVEQARQIYLELK 204
+ V+ F G+ A+ F+ G L N + L+ LC+ V++ R + L+
Sbjct: 175 SAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLE 234
Query: 205 -QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFS 263
+ + ++ +IHG+ K + +A +EM G V+SYS +I E N
Sbjct: 235 DEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVE 294
Query: 264 KVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+ LL +M + PN++TYT I+ L K K +EA + R
Sbjct: 295 EALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNR 337
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 1/145 (0%)
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
L D + G + + T ++ G + DA ++ D + + GL N N ++D C
Sbjct: 712 LFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYC 771
Query: 189 KEEFVEQA-RQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
K E A R + ++ + P+A T + I G+CK +EEA E K
Sbjct: 772 KLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFF 831
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEM 272
+ +I+ +C + + LL EM
Sbjct: 832 GFLFLIKGFCTKGRMEEARGLLREM 856
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 1/133 (0%)
Query: 172 GLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEA 230
G+ NT + N L++ LC++ + +A +++ L+ + P+ T+ I I CK +A
Sbjct: 685 GVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDA 744
Query: 231 HWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCA 290
+ M G P +I Y++I+ YC ++ +P+ T + ++
Sbjct: 745 EKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKG 804
Query: 291 LAKAEKFDEALQV 303
K +EAL V
Sbjct: 805 YCKKGDMEEALSV 817
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 81/153 (52%), Gaps = 1/153 (0%)
Query: 155 AGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHT 213
G+ +A + D + G + +T + +L+ LC +++A ++ E+ + PN HT
Sbjct: 279 VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHT 338
Query: 214 FNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQ 273
+ + I G C+ ++EEA+ ++M P VI+Y+ +I YC + +ELL M+
Sbjct: 339 YTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVME 398
Query: 274 AQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+ C PNV T+ +M L + K +A+ +++R
Sbjct: 399 KRACKPNVRTFNELMEGLCRVGKPYKAVHLLKR 431
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 84/171 (49%), Gaps = 2/171 (1%)
Query: 132 QMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEE 191
+M +G ++ + ++ G A + +G ++ LL C+
Sbjct: 185 RMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGL 244
Query: 192 FVEQARQIYLELKQHI--APNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISY 249
+ A +++ + + + APN+ +++I IHG C++ R+EEA +M GC+P +Y
Sbjct: 245 NLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTY 304
Query: 250 STIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
+ +I+ C+ K + L DEM + C PNV TYT+++ L + K +EA
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEA 355
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 106/220 (48%), Gaps = 1/220 (0%)
Query: 86 DWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTI 145
+ + AL +F S + SY +++ L + +++ L DQM +G + T
Sbjct: 245 NLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTY 304
Query: 146 AKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-K 204
+++ G A +FD++ G + N + +L+D LC++ +E+A + ++ K
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK 364
Query: 205 QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSK 264
I P+ T+N I+G+CK RV A + M+ C+P V +++ +++ C K
Sbjct: 365 DRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYK 424
Query: 265 VYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
LL M SP++V+Y +++ L + + A +++
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLL 464
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 98/237 (41%), Gaps = 38/237 (16%)
Query: 106 SPE--SYDMMVDILGRMKVMDKLRDLLDQMRC---EGSIITLNTI---------AKVMRR 151
SP+ SY++++D L R M+ LL M C E +T I A V
Sbjct: 438 SPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASA 497
Query: 152 FVG-----------------------AGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
F+G G+ DA+ I + L + + S+N++LD L
Sbjct: 498 FLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLS 557
Query: 189 KEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
K V++ + ++ K + P+ T+ + G + + + ++ MK GC P V
Sbjct: 558 KGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVY 617
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
Y+ II C + +LL MQ SPN VTYT+++ K D AL+ +
Sbjct: 618 PYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETV 674
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 107/269 (39%), Gaps = 42/269 (15%)
Query: 70 HLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDIL---GRMKV---- 122
H++PN+ + ++ + D + F W HS++ P + ++ ++ G +V
Sbjct: 66 HMNPNVASQVISLQRSDNDICVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSGLYRVAHAV 125
Query: 123 --------------MDKLRDLLDQMR----------CEGSIITLNTIAKVMRRFVGAGQW 158
M KL D++R C S+ L ++AK+ F+
Sbjct: 126 IVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSL--LMSLAKLDLGFL----- 178
Query: 159 ADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIF 217
A + ++ G +++ LCK + E A + LK ++H
Sbjct: 179 --AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSL 236
Query: 218 IHGWCKIRRVEEAHWTIQEM-KGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQD 276
+ G+C+ + +A M K C P +SYS +I C + + L D+M +
Sbjct: 237 LLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKG 296
Query: 277 CSPNVVTYTIIMCALAKAEKFDEALQVIE 305
C P+ TYT+++ AL D+A + +
Sbjct: 297 CQPSTRTYTVLIKALCDRGLIDKAFNLFD 325
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 90/201 (44%), Gaps = 7/201 (3%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQM---RCEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
+Y +++D L R +++ + +M R S+IT N + + + G+ A +
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNAL---INGYCKDGRVVPAFELL 394
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKI 224
++ + N + N L++ LC+ +A + L ++P+ ++N+ I G C+
Sbjct: 395 TVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCRE 454
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
+ A+ + M + P ++++ II +C + L M + S + VT
Sbjct: 455 GHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTG 514
Query: 285 TIIMCALAKAEKFDEALQVIE 305
T ++ + K K +AL ++E
Sbjct: 515 TTLIDGVCKVGKTRDALFILE 535
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 70/127 (55%), Gaps = 4/127 (3%)
Query: 183 LLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYG 241
L+ L KE +Y E+ ++ I PN TFN+ I+ CK ++ +A +++MK YG
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 242 CRPCVISYSTIIQCYCNEQNFSKVYE---LLDEMQAQDCSPNVVTYTIIMCALAKAEKFD 298
C P V+SY+T+I YC K+Y+ +L EM D SPN+ T+ I++ K +
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 299 EALQVIE 305
+++V +
Sbjct: 314 GSMKVFK 320
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 116/247 (46%), Gaps = 11/247 (4%)
Query: 66 CDAIHLSPNLINILLRRYKDDWKSALGL--FKWASLHSNFQHSPESYDMMVDIL--GRMK 121
CD + ++ + ++L+ Y ++ + LG FK + + + +M+ +L R
Sbjct: 146 CDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSA 205
Query: 122 VMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMN 181
++ + + + + + ++ T N + + + G+ A + +D++ G N S N
Sbjct: 206 DVEYVYKEMIRRKIQPNVFTFNVVINALCK---TGKMNKARDVMEDMKVYGCSPNVVSYN 262
Query: 182 LLLDTLCK---EEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEM 237
L+D CK + +A + E+ ++ ++PN TFNI I G+ K + + +EM
Sbjct: 263 TLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM 322
Query: 238 KGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKF 297
+P VISY+++I CN S+ + D+M + PN++TY ++ K +
Sbjct: 323 LDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDML 382
Query: 298 DEALQVI 304
EAL +
Sbjct: 383 KEALDMF 389
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 95/175 (54%), Gaps = 9/175 (5%)
Query: 115 DILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLE 174
++ G MKV +++LDQ + ++I+ N++ + G+ ++A+ + D + + G++
Sbjct: 311 NLPGSMKV---FKEMLDQ-DVKPNVISYNSL---INGLCNGGKISEAISMRDKMVSAGVQ 363
Query: 175 KNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWT 233
N + N L++ CK + +++A ++ +K Q P +N+ I +CK+ ++++
Sbjct: 364 PNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFAL 423
Query: 234 IQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
+EM+ G P V +Y+ +I C N +L D++ ++ P++VT+ I+M
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILM 477
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/193 (18%), Positives = 98/193 (50%), Gaps = 1/193 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+ +++ + ++ + D+ ++ +G++ T ++ + G+ D + +++
Sbjct: 368 TYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVE 228
+ G+ + + N L+ LC+ +E A++++ +L P+ TF+I + G+C+
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESR 487
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQ-DCSPNVVTYTII 287
+A ++EM G +P ++Y+ +++ YC E N + +M+ + NV +Y ++
Sbjct: 488 KAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVL 547
Query: 288 MCALAKAEKFDEA 300
+ ++ K ++A
Sbjct: 548 LQGYSQKGKLEDA 560
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/237 (18%), Positives = 102/237 (43%), Gaps = 39/237 (16%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMR---CEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
+++++++ L + M+K RD+++ M+ C ++++ NT+ + G G+ A +
Sbjct: 225 TFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVL 284
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL---------------------- 203
++ + N + N+L+D K++ + + +++ E+
Sbjct: 285 KEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNG 344
Query: 204 --------------KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISY 249
+ PN T+N I+G+CK ++EA +KG G P Y
Sbjct: 345 GKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMY 404
Query: 250 STIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+ +I YC + L +EM+ + P+V TY ++ L + + A ++ ++
Sbjct: 405 NMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ 461
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 113/252 (44%), Gaps = 18/252 (7%)
Query: 52 SEEEIIRSLCND-QACDAIHL---------SPNLI--NILLRRY--KDDWKSALGLFKWA 97
S +I LCN + +AI + PNLI N L+ + D K AL +F
Sbjct: 333 SYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSV 392
Query: 98 SLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQ 157
+ Y+M++D ++ +D L ++M EG + + T ++ G
Sbjct: 393 KGQGAVP-TTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN 451
Query: 158 WADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNI 216
A ++FD L + GL + + ++L++ C++ +A + E+ K + P T+NI
Sbjct: 452 IEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNI 510
Query: 217 FIHGWCKIRRVEEA-HWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQ 275
+ G+CK ++ A + Q K R V SY+ ++Q Y + LL+EM +
Sbjct: 511 VMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570
Query: 276 DCSPNVVTYTII 287
PN +TY I+
Sbjct: 571 GLVPNRITYEIV 582
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 104/203 (51%), Gaps = 3/203 (1%)
Query: 106 SPE--SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVR 163
SP+ +Y +++D + R +L +M ++++ F G+W +
Sbjct: 371 SPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQ 430
Query: 164 IFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWC 222
+ +++++G++ + + N+++DT K ++ A + L + I P+ T+N I C
Sbjct: 431 VLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHC 490
Query: 223 KIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVV 282
K R A + M+ GC PC +Y+ +I Y +++ + + LL +M++Q PNVV
Sbjct: 491 KHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVV 550
Query: 283 TYTIIMCALAKAEKFDEALQVIE 305
T+T ++ K+ +F++A++ +E
Sbjct: 551 THTTLVDVYGKSGRFNDAIECLE 573
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 96/184 (52%), Gaps = 1/184 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y++M++ G + D ++ LL +M+ +G + + T ++ + +G++ DA+ +++
Sbjct: 516 TYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEM 575
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGWCKIRRV 227
+++GL+ ++ N L++ + EQA + + + P+ N I+ + + RR
Sbjct: 576 KSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRD 635
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
EA +Q MK G +P V++Y+T+++ F KV + +EM C P+ +++
Sbjct: 636 AEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSML 695
Query: 288 MCAL 291
AL
Sbjct: 696 RSAL 699
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 91/194 (46%), Gaps = 3/194 (1%)
Query: 116 ILGRMKVMD--KLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGL 173
I+G K D K LL + G T+ ++ +G+ +A +F++L+ G+
Sbjct: 276 IMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGI 335
Query: 174 EKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHW 232
+ T + N LL K ++ A + E+ K+ ++P+ HT+++ I + R E A
Sbjct: 336 KPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARI 395
Query: 233 TIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALA 292
++EM+ +P +S ++ + + + K +++L EM++ P+ Y +++
Sbjct: 396 VLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFG 455
Query: 293 KAEKFDEALQVIER 306
K D A+ +R
Sbjct: 456 KFNCLDHAMTTFDR 469
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 92/207 (44%), Gaps = 3/207 (1%)
Query: 102 NFQHSPESYDMMVDILGRMKVMDK--LRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWA 159
+Q +Y +++ L R +D L L ++ + + + + ++ F +G +
Sbjct: 227 GYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPS 286
Query: 160 DAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFI 218
A+++ Q GL T ++ ++ L +A ++ EL+Q I P +N +
Sbjct: 287 KALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALL 346
Query: 219 HGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCS 278
G+ K +++A + EM+ G P +YS +I Y N + +L EM+A D
Sbjct: 347 KGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQ 406
Query: 279 PNVVTYTIIMCALAKAEKFDEALQVIE 305
PN ++ ++ ++ + QV++
Sbjct: 407 PNSFVFSRLLAGFRDRGEWQKTFQVLK 433
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 103/193 (53%), Gaps = 1/193 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
++++++++L +K L+ +M G T+ T V+ + G++ A+ + D +
Sbjct: 235 TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 294
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRV 227
++ G++ + + N+L+ LC+ + + + ++ K+ I PN T+N I+G+ +V
Sbjct: 295 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 354
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
A + EM +G P ++++ +I + +E NF + ++ M+A+ +P+ V+Y ++
Sbjct: 355 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVL 414
Query: 288 MCALAKAEKFDEA 300
+ L K +FD A
Sbjct: 415 LDGLCKNAEFDLA 427
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 88 KSALGLFKWASLHSNFQ--HSPESYDMMVDILGRMKVMDKLRDLLDQMRCE--------G 137
K AL KW + H + + IL R ++ D R +L ++ G
Sbjct: 91 KLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFG 150
Query: 138 SIITLNTIAK--------VMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCK 189
+++T + ++R ++ G D++ IF + G + + N +L ++ K
Sbjct: 151 ALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVK 210
Query: 190 E-EFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVIS 248
E V + LK+ I P+ TFNI I+ C E++ + +Q+M+ G P +++
Sbjct: 211 SGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVT 270
Query: 249 YSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
Y+T++ YC + F ELLD M+++ +V TY +++ L ++ + +
Sbjct: 271 YNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKG 322
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 85/178 (47%), Gaps = 1/178 (0%)
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
LL++M G T ++ + G + +A+++F ++ GL + S +LLD LC
Sbjct: 360 LLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 419
Query: 189 KEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
K + AR Y+ +K++ + T+ I G CK ++EA + EM G P ++
Sbjct: 420 KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIV 479
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+YS +I +C F E++ + SPN + Y+ ++ + EA+++ E
Sbjct: 480 TYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 537
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 9/204 (4%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y M+D L + +D+ LL++M +G + T + ++ F G++ A I +
Sbjct: 445 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 504
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIY--LELKQHIAPNAHTFNIFIHGWCKIRR 226
+GL N + L+ C+ +++A +IY + L+ H + TFN+ + CK +
Sbjct: 505 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGH-TRDHFTFNVLVTSLCKAGK 563
Query: 227 VEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTI 286
V EA ++ M G P +S+ +I Y N K + + DEM P TY
Sbjct: 564 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 623
Query: 287 IMCALAK------AEKFDEALQVI 304
++ L K AEKF ++L +
Sbjct: 624 LLKGLCKGGHLREAEKFLKSLHAV 647
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 7/202 (3%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMR---CEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
+Y+M++ L R + K LL MR + +T NT+ + F G+ A ++
Sbjct: 305 TYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL---INGFSNEGKVLIASQLL 361
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKE-EFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKI 224
+++ + GL N + N L+D E F E + Y+ + + P+ ++ + + G CK
Sbjct: 362 NEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKN 421
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
+ A MK G I+Y+ +I C + LL+EM P++VTY
Sbjct: 422 AEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTY 481
Query: 285 TIIMCALAKAEKFDEALQVIER 306
+ ++ K +F A +++ R
Sbjct: 482 SALINGFCKVGRFKTAKEIVCR 503
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 97/216 (44%), Gaps = 4/216 (1%)
Query: 94 FKWASLHSNFQ---HSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMR 150
F + +L + ++ +P YD+++ + R ++ ++ M G ++ T ++
Sbjct: 147 FVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILG 206
Query: 151 RFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAP 209
V +G+ ++ + + + N+L++ LC E E++ + ++ K AP
Sbjct: 207 SVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAP 266
Query: 210 NAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELL 269
T+N +H +CK R + A + MK G V +Y+ +I C +K Y LL
Sbjct: 267 TIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLL 326
Query: 270 DEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+M+ + PN VTY ++ + K A Q++
Sbjct: 327 RDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLN 362
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 112/243 (46%), Gaps = 18/243 (7%)
Query: 72 SPNLINILLRRYKDDW--KSALGLFKWASLHSNFQHSPESYDMMVDILGRM-------KV 122
+P++ +IL+R Y + + +L +F+ L+ +P Y ILG + V
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYG---FNPSVYTCNA-ILGSVVKSGEDVSV 217
Query: 123 MDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNL 182
L+++L + C + T N + V+ G + + + ++ G + N
Sbjct: 218 WSFLKEMLKRKICP-DVATFNILINVL---CAEGSFEKSSYLMQKMEKSGYAPTIVTYNT 273
Query: 183 LLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYG 241
+L CK+ + A ++ +K + + + T+N+ IH C+ R+ + + +++M+
Sbjct: 274 VLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRM 333
Query: 242 CRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEAL 301
P ++Y+T+I + NE +LL+EM + SPN VT+ ++ F EAL
Sbjct: 334 IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEAL 393
Query: 302 QVI 304
++
Sbjct: 394 KMF 396
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 110/262 (41%), Gaps = 29/262 (11%)
Query: 46 KVAKGSSEEEIIRSLCNDQACDAIHLSPNLINI--LLRRYKDDWKSALGLFKWASLHSNF 103
K K + EE +R + +D + PN ++ L+ Y + + L F +
Sbjct: 560 KAGKVAEAEEFMRCMTSDG------ILPNTVSFDCLINGYGNSGE-GLKAFSVFDEMTKV 612
Query: 104 QHSPE--SYDMMVDIL---GRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQW 158
H P +Y ++ L G ++ +K L + + NT+ M + +G
Sbjct: 613 GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCK---SGNL 669
Query: 159 ADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEE-------FVEQARQIYLELKQHIAPNA 211
A AV +F ++ + ++ + L+ LC++ F ++A E + ++ PN
Sbjct: 670 AKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEA-----EARGNVLPNK 724
Query: 212 HTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDE 271
+ F+ G K + + + ++M G P +++ + +I Y K +LL E
Sbjct: 725 VMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPE 784
Query: 272 MQAQDCSPNVVTYTIIMCALAK 293
M Q+ PN+ TY I++ +K
Sbjct: 785 MGNQNGGPNLTTYNILLHGYSK 806
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 69/150 (46%), Gaps = 1/150 (0%)
Query: 156 GQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTF 214
G +A+RI++ + G ++ + N+L+ +LCK V +A + + I PN +F
Sbjct: 527 GCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSF 586
Query: 215 NIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQA 274
+ I+G+ +A EM G P +Y ++++ C + + + L + A
Sbjct: 587 DCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHA 646
Query: 275 QDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+ + V Y ++ A+ K+ +A+ +
Sbjct: 647 VPAAVDTVMYNTLLTAMCKSGNLAKAVSLF 676
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 126/294 (42%), Gaps = 26/294 (8%)
Query: 26 GFRHQEQCQSLMRSVDILT--------SKVAKGSSEEEIIRSLCNDQACDAIHLSPNLI- 76
G +EQ +L + DI+T S++ K +++ + N PNL
Sbjct: 743 GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNG------GPNLTT 796
Query: 77 -NILLRRY--KDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQM 133
NILL Y + D ++ L++ L+ + +++ I +++ +L
Sbjct: 797 YNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGIC-ESNMLEIGLKILKAF 855
Query: 134 RCEGSIITLNTIAKVMRRFVGAGQ--WA-DAVRIFDDLQTLGLEKNTESMNLLLDTLCKE 190
C G + T ++ + G+ WA D V++ + +LG+ + ++ + ++ L +
Sbjct: 856 ICRGVEVDRYTFNMLISKCCANGEINWAFDLVKV---MTSLGISLDKDTCDAMVSVLNRN 912
Query: 191 EFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISY 249
+++R + E+ KQ I+P + + I+G C++ ++ A +EM + P ++
Sbjct: 913 HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 972
Query: 250 STIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
S +++ + LL M P + ++T +M K EAL++
Sbjct: 973 SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALEL 1026
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 96/196 (48%), Gaps = 1/196 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
SY++++ L +D+ + M +G T + G A+ + ++
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEV 420
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRV 227
++ G + + ++D LCK++ +E+A + E+ +H + N+H N I G + R+
Sbjct: 421 ESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRL 480
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
EA + ++EM GCRP V+SY+ +I C F + + EM P++ TY+I+
Sbjct: 481 GEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSIL 540
Query: 288 MCALAKAEKFDEALQV 303
+C L + K D AL++
Sbjct: 541 LCGLCRDRKIDLALEL 556
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 109/243 (44%), Gaps = 13/243 (5%)
Query: 71 LSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLL 130
LSP + LL+ K+ ++A LF A+ H + HS Y ++ L ++++ + ++
Sbjct: 8 LSPKHVLKLLKSEKNP-RAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIV 66
Query: 131 DQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL-QTLGLEKNTESMNLLLDTLCK 189
+ +R + + V++ + A+ +F + + G E S N LL+
Sbjct: 67 ELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNA--- 123
Query: 190 EEFVEQARQIYLEL------KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCR 243
FVE + + +E +APN T+N+ I CK + E+A + M G +
Sbjct: 124 --FVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFK 181
Query: 244 PCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
P V SYST+I EL DEM + +P+V Y I++ K + A+++
Sbjct: 182 PDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMEL 241
Query: 304 IER 306
+R
Sbjct: 242 WDR 244
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 114/296 (38%), Gaps = 72/296 (24%)
Query: 77 NILLRRY--KDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMR 134
NIL+ + + D K+A+ L+ S+ + +++++M+ L + +D + ++M+
Sbjct: 223 NILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMK 282
Query: 135 CEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVE 194
L T + ++ AG A +F++L + + N +L C+ ++
Sbjct: 283 QNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIK 342
Query: 195 QARQIYLELKQHIAPNAHTFN-----------------------------------IFIH 219
++ +++ ++ + N ++N IFIH
Sbjct: 343 ESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIH 402
Query: 220 GWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYEL----------- 268
G C V +A +QE++ G V +Y++II C C ++ + L
Sbjct: 403 GLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVEL 462
Query: 269 ------------------------LDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
L EM C P VV+Y I++C L KA KF EA
Sbjct: 463 NSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEA 518
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 99/230 (43%), Gaps = 2/230 (0%)
Query: 77 NILLRRYKDDWKSALGLFKWASLHS-NFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRC 135
NIL++ ++ K W + + + +Y + + L ++K ++ ++
Sbjct: 363 NILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVES 422
Query: 136 EGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQ 195
G + + A ++ + +A + ++ G+E N+ N L+ L ++ + +
Sbjct: 423 SGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGE 482
Query: 196 ARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQ 254
A E+ K P ++NI I G CK + EA ++EM G +P + +YS ++
Sbjct: 483 ASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLC 542
Query: 255 CYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
C ++ EL + +V+ + I++ L K D+A+ V+
Sbjct: 543 GLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVM 592
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/138 (19%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Query: 155 AGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHT 213
AG++ +A ++ G + + ++ ++LL LC++ ++ A +++ + L+ + +
Sbjct: 512 AGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMM 571
Query: 214 FNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQ 273
NI IHG C + ++++A + M+ C +++Y+T+++ + + ++ + M
Sbjct: 572 HNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMY 631
Query: 274 AQDCSPNVVTYTIIMCAL 291
P++++Y IM L
Sbjct: 632 KMGLQPDIISYNTIMKGL 649
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 115/285 (40%), Gaps = 72/285 (25%)
Query: 93 LFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRF 152
+F +AS NF+HS S+ +++ LGR + + + D+L + R G +T +++ +
Sbjct: 70 IFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVY 129
Query: 153 VGA------------------------------------GQWADAVRIFDDLQTLGLEKN 176
A G A +F + G+ N
Sbjct: 130 AEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPN 189
Query: 177 TESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQ 235
T S NLL+ C + + A Q++ + L++ + P+ ++ I I G+C+ +V A +
Sbjct: 190 TRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLD 249
Query: 236 EM--KGY---------------------------------GCRPCVISYSTIIQCYCNEQ 260
+M KG+ GC P ++ Y+T+I +C E
Sbjct: 250 DMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCRED 309
Query: 261 NFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
++LD+M + CSPN V+Y ++ L FDE + +E
Sbjct: 310 RAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLE 354
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 109/233 (46%), Gaps = 2/233 (0%)
Query: 74 NLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQM 133
N I +L ++ + A LFK + LH ++ SY++++ + L +M
Sbjct: 158 NRILDVLVSHRGYLQKAFELFKSSRLHGVMPNT-RSYNLLMQAFCLNDDLSIAYQLFGKM 216
Query: 134 RCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFV 193
+ +++ +++ F GQ A+ + DD+ G + S LL++LC++ +
Sbjct: 217 LERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQL 276
Query: 194 EQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTI 252
+A ++ +K + P+ +N I G+C+ R +A + +M GC P +SY T+
Sbjct: 277 REAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTL 336
Query: 253 IQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
I C++ F + + L+EM ++ SP+ ++ K +EA V+E
Sbjct: 337 IGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVE 389
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 86/163 (52%), Gaps = 1/163 (0%)
Query: 144 TIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY-LE 202
T + ++ FV G+ +A +++D++ ++ + + + L++ C + +++A+Q++
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387
Query: 203 LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNF 262
+ +H P+ T+N I G+CK +RVEE +EM G ++Y+ +IQ +
Sbjct: 388 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 447
Query: 263 SKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
E+ EM + PN++TY ++ L K K ++A+ V E
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 490
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 91/176 (51%), Gaps = 7/176 (3%)
Query: 129 LLDQMRCEG---SIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLD 185
L+DQM G + +T NT+ + + ++A+ + D + G + + + ++++
Sbjct: 173 LVDQMFVTGYQPNTVTFNTL---IHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 229
Query: 186 TLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRP 244
LCK + A + +++Q + P +N I G CK + +++A +EM+ G RP
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 289
Query: 245 CVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
V++YS++I C CN +S LL +M + +P+V T++ ++ A K K EA
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 7/200 (3%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
+ ++ + +M D + L +QM+ G T + ++ F Q A+ + +
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQA----RQIYLELKQHIAPNAHTFNIFIHGWCKIR 225
LG E N +++ LL+ C + + +A Q+++ Q PN TFN IHG
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ---PNTVTFNTLIHGLFLHN 200
Query: 226 RVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYT 285
+ EA I M GC+P +++Y ++ C + + LL++M+ P V+ Y
Sbjct: 201 KASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYN 260
Query: 286 IIMCALAKAEKFDEALQVIE 305
I+ L K + D+AL + +
Sbjct: 261 TIIDGLCKYKHMDDALNLFK 280
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 101/200 (50%), Gaps = 7/200 (3%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQM---RCEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
+Y ++V+ L + D +LL++M + E ++ NTI + ++ DA+ +F
Sbjct: 223 TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKY---KHMDDALNLF 279
Query: 166 DDLQTLGLEKNTESMNLLLDTLCK-EEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKI 224
+++T G+ N + + L+ LC + + +R + +++ I P+ TF+ I + K
Sbjct: 280 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 339
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
++ EA EM P +++YS++I +C + ++ + M ++ C P+VVTY
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 399
Query: 285 TIIMCALAKAEKFDEALQVI 304
++ K ++ +E ++V
Sbjct: 400 NTLIKGFCKYKRVEEGMEVF 419
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 89/183 (48%), Gaps = 1/183 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+ ++ + K +++ ++ +M G + T +++ AG A IF ++
Sbjct: 398 TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 457
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRV 227
+ G+ N + N LLD LCK +E+A ++ L + + P +T+NI I G CK +V
Sbjct: 458 VSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 517
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
E+ + G +P V++Y+T+I +C + + + L EM+ PN Y +
Sbjct: 518 EDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTL 577
Query: 288 MCA 290
+ A
Sbjct: 578 IRA 580
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 1/178 (0%)
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
L+D+M +G L T V+ G A + + ++ LE N ++D LC
Sbjct: 208 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 267
Query: 189 KEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
K + ++ A ++ E++ + I PN T++ I C R +A + +M P V
Sbjct: 268 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 327
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
++S +I + E + +L DEM + P++VTY+ ++ ++ DEA Q+ E
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 81/163 (49%), Gaps = 1/163 (0%)
Query: 145 IAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL- 203
+K++ ++ + + + +Q LG+ N + ++L++ C+ + A + ++
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 204 KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFS 263
K PN T + ++G+C +R+ EA + +M G +P ++++T+I S
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 264 KVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+ L+D M A+ C P++VTY +++ L K D A ++ +
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNK 246
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 88/184 (47%), Gaps = 4/184 (2%)
Query: 118 GRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNT 177
G++ +KL D + + + SI+T +++ + F + +A ++F+ + + +
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSL---INGFCMHDRLDEAKQMFEFMVSKHCFPDV 396
Query: 178 ESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQE 236
+ N L+ CK + VE+ +++ E+ Q + N T+NI I G + + A +E
Sbjct: 397 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 456
Query: 237 MKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEK 296
M G P +++Y+T++ C K + + +Q P + TY I++ + KA K
Sbjct: 457 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Query: 297 FDEA 300
++
Sbjct: 517 VEDG 520
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 78/167 (46%), Gaps = 4/167 (2%)
Query: 135 CEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVE 194
C ++T NT+ K F + + + +F ++ GL NT + N+L+ L + +
Sbjct: 392 CFPDVVTYNTLIK---GFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 448
Query: 195 QARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTII 253
A++I+ E+ + PN T+N + G CK ++E+A + ++ P + +Y+ +I
Sbjct: 449 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 508
Query: 254 QCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
+ C ++L + + P+VV Y ++ + +EA
Sbjct: 509 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 80/167 (47%), Gaps = 1/167 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y++++ L + D +++ +M +G + T ++ G+ A+ +F+ L
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRV 227
Q +E + N++++ +CK VE ++ L + + P+ +N I G+C+
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQA 274
EEA +EMK G P Y+T+I+ + + EL+ EM++
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 599
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 105/198 (53%), Gaps = 1/198 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+ +++ +M +D +LD+MR + T ++ G+ A+++ + L
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRV 227
+ + + +L++ E V++A ++ E L + + P+ T+N I G CK V
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
+ A ++ ++ GC P VISY+ +++ N+ + + +L+ +M ++ C PNVVTY+I+
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 288 MCALAKAEKFDEALQVIE 305
+ L + K +EA+ +++
Sbjct: 340 ITTLCRDGKIEEAMNLLK 357
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 127/266 (47%), Gaps = 18/266 (6%)
Query: 56 IIRSLCNDQACD-AIHLSPNL-----------INILLRRYKDDWKSALGLFKWASLHSNF 103
IIR +C + D A + NL NILLR + K G + S
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE- 327
Query: 104 QHSPE--SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADA 161
+ P +Y +++ L R +++ +LL M+ +G + ++ F G+ A
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387
Query: 162 VRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFN-IFIH 219
+ + + + G + + N +L TLCK +QA +I+ +L + +PN+ ++N +F
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447
Query: 220 GWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSP 279
W ++ H I EM G P I+Y+++I C C E + +ELL +M++ + P
Sbjct: 448 LWSSGDKIRALHM-ILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHP 506
Query: 280 NVVTYTIIMCALAKAEKFDEALQVIE 305
+VVTY I++ KA + ++A+ V+E
Sbjct: 507 SVVTYNIVLLGFCKAHRIEDAINVLE 532
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 1/209 (0%)
Query: 99 LHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQW 158
L N Q + +Y ++++ +D+ L+D+M G + T ++R G
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 159 ADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIF 217
A + +L+ G E + S N+LL L + E+ ++ ++ + PN T++I
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 218 IHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDC 277
I C+ ++EEA ++ MK G P SY +I +C E E L+ M + C
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399
Query: 278 SPNVVTYTIIMCALAKAEKFDEALQVIER 306
P++V Y ++ L K K D+AL++ +
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGK 428
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 79/148 (53%), Gaps = 1/148 (0%)
Query: 160 DAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFI 218
DA R+ D +++ +T + N+++ +LC ++ A ++ +L + P T+ I I
Sbjct: 176 DATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILI 235
Query: 219 HGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCS 278
V+EA + EM G +P + +Y+TII+ C E + +E++ ++ + C
Sbjct: 236 EATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCE 295
Query: 279 PNVVTYTIIMCALAKAEKFDEALQVIER 306
P+V++Y I++ AL K++E +++ +
Sbjct: 296 PDVISYNILLRALLNQGKWEEGEKLMTK 323
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 1/196 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
SYD ++ R +D + L+ M +G + + V+ G+ A+ IF L
Sbjct: 370 SYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRV 227
+G N+ S N + L +A + LE+ + I P+ T+N I C+ V
Sbjct: 430 GEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMV 489
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
+EA + +M+ P V++Y+ ++ +C +L+ M C PN TYT++
Sbjct: 490 DEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVL 549
Query: 288 MCALAKAEKFDEALQV 303
+ + A EA+++
Sbjct: 550 IEGIGFAGYRAEAMEL 565
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 79/159 (49%)
Query: 147 KVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH 206
K+ R +G + +++ + + + G + L+ + +A ++ L++
Sbjct: 94 KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKF 153
Query: 207 IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVY 266
P+ +N I+G+CK+ R+++A + M+ P ++Y+ +I C+
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 267 ELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
++L+++ + +C P V+TYTI++ A DEAL++++
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMD 252
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 71/138 (51%), Gaps = 2/138 (1%)
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVE 228
Q+LG ++T+ + + + ++E + +++ P+ I G+ +R +
Sbjct: 83 QSLGF-RDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIP 141
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
+A ++ ++ +G +P V +Y+ +I +C +LD M+++D SP+ VTY I++
Sbjct: 142 KAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMI 200
Query: 289 CALAKAEKFDEALQVIER 306
+L K D AL+V+ +
Sbjct: 201 GSLCSRGKLDLALKVLNQ 218
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 103/198 (52%), Gaps = 1/198 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
SY+ ++ K ++K +L ++M+ G +L T ++ F AG+ +A+ ++
Sbjct: 179 SYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM 238
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRV 227
+ +GLE + L+ C +++ + ++ E L++ +P A T+N I G+CK+ ++
Sbjct: 239 KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQL 298
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
+EA + M G RP V +Y+ +I C + +LL+ M +D PN VTY II
Sbjct: 299 KEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNII 358
Query: 288 MCALAKAEKFDEALQVIE 305
+ L K +A++++E
Sbjct: 359 INKLCKDGLVADAVEIVE 376
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 11/190 (5%)
Query: 123 MDKLRDLLDQMRCEGS---IITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTES 179
+D+ + L D++ G IT NT+ +R F GQ +A IF+ + G+ N +
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTL---IRGFCKLGQLKEASEIFEFMIERGVRPNVYT 319
Query: 180 MNLLLDTLCKEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMK 238
L+D LC ++A Q+ L +++ PNA T+NI I+ CK V +A ++ MK
Sbjct: 320 YTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMK 379
Query: 239 GYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCS---PNVVTYTIIMCALAKAE 295
RP I+Y+ ++ C + + + +LL + +D S P+V++Y ++ L K
Sbjct: 380 KRRTRPDNITYNILLGGLCAKGDLDEASKLL-YLMLKDSSYTDPDVISYNALIHGLCKEN 438
Query: 296 KFDEALQVIE 305
+ +AL + +
Sbjct: 439 RLHQALDIYD 448
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 92/197 (46%), Gaps = 1/197 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
++ +++D + MD+ L +M+ G L ++R F G+ +FD++
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGWCKIRRV 227
G + N L+ CK +++A +I+ +++ + PN +T+ I G C + +
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT 333
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
+EA + M P ++Y+ II C + + E+++ M+ + P+ +TY I+
Sbjct: 334 KEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNIL 393
Query: 288 MCALAKAEKFDEALQVI 304
+ L DEA +++
Sbjct: 394 LGGLCAKGDLDEASKLL 410
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 60/107 (56%)
Query: 199 IYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCN 258
+ L LK+ A N + NI + G C+ +A ++EM+ P V SY+T+I+ +C
Sbjct: 130 LALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCE 189
Query: 259 EQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+ K EL +EM+ CS ++VT+ I++ A KA K DEA+ ++
Sbjct: 190 GKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLK 236
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 94/207 (45%), Gaps = 1/207 (0%)
Query: 99 LHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQW 158
L F + ++++++ L R K LL +MR + + + V+R F +
Sbjct: 134 LKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKEL 193
Query: 159 ADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIF 217
A+ + ++++ G + + +L+D CK +++A E+K + + +
Sbjct: 194 EKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSL 253
Query: 218 IHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDC 277
I G+C ++ E+ G PC I+Y+T+I+ +C + E+ + M +
Sbjct: 254 IRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313
Query: 278 SPNVVTYTIIMCALAKAEKFDEALQVI 304
PNV TYT ++ L K EALQ++
Sbjct: 314 RPNVYTYTGLIDGLCGVGKTKEALQLL 340
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 76/153 (49%), Gaps = 3/153 (1%)
Query: 154 GAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY-LELKQHIAPNAH 212
G G+ +A+++ + + E N + N++++ LCK+ V A +I L K+ P+
Sbjct: 329 GVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI 388
Query: 213 TFNIFIHGWCKIRRVEEAHWTIQEM--KGYGCRPCVISYSTIIQCYCNEQNFSKVYELLD 270
T+NI + G C ++EA + M P VISY+ +I C E + ++ D
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYD 448
Query: 271 EMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
+ + + + VT I++ + KA ++A+++
Sbjct: 449 LLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL 481
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
Query: 179 SMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEM 237
+ N+LL++ K V +A +++ ++ I N+ T+ I G+CK + A + +M
Sbjct: 461 TTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM 520
Query: 238 KGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKF 297
+ +P V Y+ ++ C E + + + L +EMQ + P+VV++ I++ KA
Sbjct: 521 RVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDI 580
Query: 298 DEA 300
A
Sbjct: 581 KSA 583
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 80/180 (44%), Gaps = 4/180 (2%)
Query: 128 DLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTL 187
DLL + G +T N + + + AG A+ ++ + + +N+++ ++D
Sbjct: 448 DLLVEKLGAGDRVTTNIL---LNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGF 504
Query: 188 CKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCV 246
CK + A+ + +++ + P+ +N + CK +++A +EM+ P V
Sbjct: 505 CKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDV 564
Query: 247 ISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+S++ +I + LL M SP++ TY+ ++ K DEA+ ++
Sbjct: 565 VSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDK 624
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 102 NFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEG--SIITLNTIAKVMRRFVGAGQWA 159
F + ++++++D+ G+ K+ K+ +L + G +I+ NTI + +
Sbjct: 694 GFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMS 753
Query: 160 DAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIA-PNAHTFNIFI 218
A++ ++Q G + E+ N LLD K++ +E+ R I +K+ + P+ +T+NI I
Sbjct: 754 SAIK---NMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMI 810
Query: 219 HGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCS 278
+ + + ++E ++E+K G P + SY+T+I+ Y + L+ EM+ ++
Sbjct: 811 NIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNII 870
Query: 279 PNVVTYTIIMCALAKAEKFDEALQ 302
P+ VTYT ++ AL + ++F EA++
Sbjct: 871 PDKVTYTNLVTALRRNDEFLEAIK 894
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 65/141 (46%)
Query: 165 FDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKI 224
F+++ G NT + N+LLD K + ++ +++L K+H + ++N I + K
Sbjct: 687 FEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKN 746
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
+ I+ M+ G + +Y+T++ Y ++ K +L M+ P+ TY
Sbjct: 747 KDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTY 806
Query: 285 TIIMCALAKAEKFDEALQVIE 305
I++ + DE V++
Sbjct: 807 NIMINIYGEQGWIDEVADVLK 827
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 97/229 (42%), Gaps = 4/229 (1%)
Query: 73 PNL--INILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLL 130
PN+ I +L+ Y+ +W F ++ + +Y M+ I R+++ DK +++
Sbjct: 243 PNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYDKAEEVI 302
Query: 131 DQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKE 190
D M+ + + L ++ + G+ A I ++ G N + N L+ K
Sbjct: 303 DLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKI 362
Query: 191 EFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISY 249
+E A+ ++ L + P+ ++ I GW + EEA QE+K G +P +
Sbjct: 363 FKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNL 422
Query: 250 STIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFD 298
T+I + + +++M C + + II+ A K K D
Sbjct: 423 FTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSIL-GIILQAYEKVGKID 470
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/222 (18%), Positives = 92/222 (41%), Gaps = 7/222 (3%)
Query: 89 SALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQM----RCEGSIITLNT 144
+A+ F W + + +Y +++ +LGR + D+ DL+ ++ + S NT
Sbjct: 156 NAIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNT 215
Query: 145 IAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK 204
+ + G A + F + G+ N ++ +L+ K VE+A + ++
Sbjct: 216 VIYACTK---KGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMR 272
Query: 205 QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSK 264
+ ++ I + ++R ++A I MK R + ++ ++ Y +
Sbjct: 273 KFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMEL 332
Query: 265 VYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+L M+A SPN++ Y ++ K K + A + R
Sbjct: 333 AESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHR 374
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 108/238 (45%), Gaps = 8/238 (3%)
Query: 71 LSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDIL---GRMKVMDKLR 127
++P+++ +L+ +D A F WA ++H +Y+ L G + D+L
Sbjct: 123 VTPSIVAEVLK-LGNDAAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLP 181
Query: 128 DLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTL 187
+L+D +G + ++R + +++ ++ G + N ++D L
Sbjct: 182 ELMDS---QGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDAL 238
Query: 188 CKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCV 246
K + + A +Y + K+ + + TF I + G CK R+EE +Q M+ C+P V
Sbjct: 239 VKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDV 298
Query: 247 ISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+Y+ +I+ +E N + DEM+ + P+V+ Y ++ L K + + ++
Sbjct: 299 FAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELF 356
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 105/225 (46%), Gaps = 13/225 (5%)
Query: 92 GLFKWA-SLHSNFQHS---PESYDMMVDILGRMKV--MDKLRDLLDQMR---CEGSIITL 142
G F A +++ +F+ ES M+ + G K ++++ ++L +MR C+ +
Sbjct: 242 GYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAY 301
Query: 143 NTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE 202
+ K + V G ++R++D+++ ++ + + L+ LCK+ VE+ ++++E
Sbjct: 302 TAMIKTL---VSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFME 358
Query: 203 LK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQN 261
+K + I + + + I G+ +V A +++ G + Y+ +I+ C+
Sbjct: 359 MKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQ 418
Query: 262 FSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
K Y+L ++ P+ T + IM A + + V+ER
Sbjct: 419 VDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLER 463
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 98/179 (54%), Gaps = 1/179 (0%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
Y+ + LG++K + + DL ++M+ +G + T ++ F G+ +A+ IF++L+
Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELE 504
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVE 228
+ + S N L++ L K V++A + E+++ + P+ T++ + + K RVE
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVE 564
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
A+ +EM GC+P +++Y+ ++ C ++ +L +M+ Q +P+ +TYT++
Sbjct: 565 MAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 115/257 (44%), Gaps = 43/257 (16%)
Query: 90 ALGLFKW-ASLHSNFQHSPESYDMMVDILGRMKV---MDKLRDLLDQM---RCEGSIITL 142
A+ FK SL Q+ P Y+ ++ IL R + D++R +LD M G+I T+
Sbjct: 115 AVEFFKLVPSLCPYSQNDPFLYNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTV 174
Query: 143 NTIAK-----------------------------VMRRFVGAGQWADAVRIFDDLQTLGL 173
N + +++ ++ + ++ A ++ +++ G
Sbjct: 175 NILIGFFGNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGH 234
Query: 174 EKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHW 232
+ + + N+LLD L K+E +A Q++ ++K+ H + +T+ I I +I + +EA
Sbjct: 235 KLDIFAYNMLLDALAKDE---KACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVG 291
Query: 233 TIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTI---IMC 289
EM G V+ Y+T++Q + K ++ M C PN TY++ ++
Sbjct: 292 LFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLV 351
Query: 290 ALAKAEKFDEALQVIER 306
A + + D +++ +R
Sbjct: 352 AEGQLVRLDGVVEISKR 368
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 99/234 (42%), Gaps = 41/234 (17%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIA-KVMRRFVGAGQWAD-AVRIFD 166
+Y +M+ +GR+ D+ L ++M EG +TLN + + + + G+ D A+++F
Sbjct: 272 TYTIMIRTMGRIGKCDEAVGLFNEMITEG--LTLNVVGYNTLMQVLAKGKMVDKAIQVFS 329
Query: 167 DLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRR 226
+ G N + +LLL+ L E + + + K+++ +++ + K+
Sbjct: 330 RMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSY--LVRTLSKLGH 387
Query: 227 VEEAH------WTIQ---EMKGY--------------------------GCRPCVISYST 251
V EAH W+ E Y G + Y+T
Sbjct: 388 VSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNT 447
Query: 252 IIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+ + S +++L ++M+ SP++ TY I++ + + + DEA+ + E
Sbjct: 448 VFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFE 501
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 100/181 (55%), Gaps = 5/181 (2%)
Query: 126 LRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLD 185
L D++++ + +++T N + + FV G++ +A ++ DD+ ++ + + N L++
Sbjct: 243 LSDMIEK-KINPNLVTFNAL---IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLIN 298
Query: 186 TLCKEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRP 244
C + +++A+Q++ + + P+ T+N I G+CK +RVE+ +EM G
Sbjct: 299 GFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 358
Query: 245 CVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
++Y+T+IQ ++ + ++ +M + P+++TY+I++ L K ++AL+V
Sbjct: 359 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 418
Query: 305 E 305
+
Sbjct: 419 D 419
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 98/198 (49%), Gaps = 1/198 (0%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
++ ++D L + + +D +L +M +G + T + ++ G+W+DA ++ D+
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 170 TLGLEKNTESMNLLLDTLCKE-EFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVE 228
+ N + N L+D KE +FVE + +K+ I P+ T+N I+G+C R++
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
+A + M C P + +Y+T+I+ +C + EL EM + + VTYT ++
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 289 CALAKAEKFDEALQVIER 306
L D A +V ++
Sbjct: 368 QGLFHDGDCDNAQKVFKQ 385
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 88/173 (50%), Gaps = 1/173 (0%)
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
L+DQM G T ++ + ++AV + D + G + N + ++++ LC
Sbjct: 102 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 161
Query: 189 KEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
K ++ A + +++ I + FN I CK R V++A +EM+ G RP V+
Sbjct: 162 KRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 221
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
+YS++I C C+ +S +LL +M + +PN+VT+ ++ A K KF EA
Sbjct: 222 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 74/147 (50%), Gaps = 1/147 (0%)
Query: 161 AVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIH 219
+ + + +Q LG+ N + N+L++ C+ + A + ++ K P+ T + ++
Sbjct: 29 VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 88
Query: 220 GWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSP 279
G+C +R+ +A + +M G RP I+++T+I S+ L+D M + C P
Sbjct: 89 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 148
Query: 280 NVVTYTIIMCALAKAEKFDEALQVIER 306
N+VTY +++ L K D A ++ +
Sbjct: 149 NLVTYGVVVNGLCKRGDIDLAFNLLNK 175
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 92/197 (46%), Gaps = 1/197 (0%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
++ ++ + +MK D + L ++M+ G L T ++ F Q + A+ + +
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVE 228
LG E + +++ LL+ C + + A + ++ + P+ TF IHG +
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
EA + M GC+P +++Y ++ C + + LL++M+A +VV + I+
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 289 CALAKAEKFDEALQVIE 305
+L K D+AL + +
Sbjct: 193 DSLCKYRHVDDALNLFK 209
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 83/178 (46%), Gaps = 1/178 (0%)
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
L+D+M G L T V+ G A + + ++ +E + N ++D+LC
Sbjct: 137 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 196
Query: 189 KEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
K V+ A ++ E++ + I PN T++ I C R +A + +M P ++
Sbjct: 197 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 256
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+++ +I + E F + +L D+M + P++ TY ++ ++ D+A Q+ E
Sbjct: 257 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 314
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 93/191 (48%), Gaps = 2/191 (1%)
Query: 108 ESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDD 167
++Y+ ++ + K ++ +L +M G + T +++ G +A ++F
Sbjct: 326 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385
Query: 168 LQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRR 226
+ + G+ + + ++LLD LC +E+A +++ + K I + + + I G CK +
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 445
Query: 227 VEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY-T 285
V++ + G +P V++Y+T+I C+++ + Y LL +M+ P+ TY T
Sbjct: 446 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNT 505
Query: 286 IIMCALAKAEK 296
+I L +K
Sbjct: 506 LIRAHLRDGDK 516
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 76/152 (50%), Gaps = 1/152 (0%)
Query: 124 DKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLL 183
D + + QM +G + T + ++ G+ A+ +FD +Q ++ + +
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Query: 184 LDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGC 242
++ +CK V+ ++ L + + PN T+N I G C R ++EA+ +++MK G
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 496
Query: 243 RPCVISYSTIIQCYCNEQNFSKVYELLDEMQA 274
P +Y+T+I+ + + + + EL+ EM++
Sbjct: 497 LPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 97/199 (48%), Gaps = 3/199 (1%)
Query: 105 HSPE--SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAV 162
+ P+ +Y+ ++D L + K ++ D ++ +G + T ++ + +W+DA
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 163 RIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGW 221
R+ D+ + N + + LLD K V +A++++ E+ + I P+ T++ I+G
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 222 CKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNV 281
C R++EA+ M GC V+SY+T+I +C + +L EM + N
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 282 VTYTIIMCALAKAEKFDEA 300
VTY ++ +A D+A
Sbjct: 366 VTYNTLIQGFFQAGDVDKA 384
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 1/163 (0%)
Query: 144 TIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL 203
TI ++ F + +DAV + D + +G + + + N ++D+LCK + V A + E+
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI 216
Query: 204 -KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNF 262
++ I PN T+ ++G C R +A + +M P VI+YS ++ +
Sbjct: 217 ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKV 276
Query: 263 SKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+ EL +EM P++VTY+ ++ L ++ DEA Q+ +
Sbjct: 277 LEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD 319
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 90/169 (53%), Gaps = 3/169 (1%)
Query: 140 ITLNTI--AKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQAR 197
IT N I + ++ FV G+ +A +F+++ + ++ + + + L++ LC + +++A
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN 315
Query: 198 QIY-LELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCY 256
Q++ L + + + ++N I+G+CK +RVE+ +EM G ++Y+T+IQ +
Sbjct: 316 QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF 375
Query: 257 CNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+ K E +M SP++ TY I++ L + ++AL + E
Sbjct: 376 FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 1/197 (0%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
++ ++ + ++K D + L +M G L T V+ F Q + A+ I +
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVE 228
LG E + ++ L++ C+ V A + ++ + P+ +N I CK +RV
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
+A +E++ G RP V++Y+ ++ CN +S LL +M + +PNV+TY+ ++
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 289 CALAKAEKFDEALQVIE 305
A K K EA ++ E
Sbjct: 268 DAFVKNGKVLEAKELFE 284
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 74/142 (52%), Gaps = 1/142 (0%)
Query: 160 DAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFI 218
+A ++FD + + G + S N L++ CK + VE +++ E+ Q + N T+N I
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372
Query: 219 HGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCS 278
G+ + V++A +M +G P + +Y+ ++ C+ K + ++MQ ++
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 432
Query: 279 PNVVTYTIIMCALAKAEKFDEA 300
++VTYT ++ + K K +EA
Sbjct: 433 LDIVTYTTVIRGMCKTGKVEEA 454
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 88/174 (50%), Gaps = 4/174 (2%)
Query: 119 RMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTE 178
R+ +++ DL+ C +++ NT+ + F A + D +++F ++ GL NT
Sbjct: 310 RIDEANQMFDLMVSKGCLADVVSYNTL---INGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 179 SMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEM 237
+ N L+ + V++A++ + ++ I+P+ T+NI + G C +E+A ++M
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Query: 238 KGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCAL 291
+ +++Y+T+I+ C + + L + + P++VTYT +M L
Sbjct: 427 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 160 DAVRIFDDLQTLGLEKNTESMNLLLDTLCKEE-FVEQARQIYLELKQHIAPNAHTFNIFI 218
DA F +++ G+ N + L++ LC + + AR + +K+ I PN T++ +
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 219 HGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCS 278
+ K +V EA +EM P +++YS++I C + ++ D M ++ C
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 279 PNVVTYTIIMCALAKAEKFDEALQV 303
+VV+Y ++ KA++ ++ +++
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKL 352
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 1/173 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
SY+ +++ + K ++ L +M G + T +++ F AG A F +
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRV 227
G+ + + N+LL LC +E+A I+ ++ K+ + + T+ I G CK +V
Sbjct: 392 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 451
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPN 280
EEA + G +P +++Y+T++ C + +V L +M+ + N
Sbjct: 452 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 504
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 96/198 (48%), Gaps = 2/198 (1%)
Query: 109 SYDMMVDILGRM-KVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDD 167
+Y++++D+ G+M + K+ +LD+MR +G T + V+ G +A F +
Sbjct: 247 TYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAE 306
Query: 168 LQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAP-NAHTFNIFIHGWCKIRR 226
L++ G E T + N LL K +A + E++++ P ++ T+N + + +
Sbjct: 307 LKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGF 366
Query: 227 VEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTI 286
+EA I+ M G P I+Y+T+I Y + +L M+ C PN TY
Sbjct: 367 SKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNA 426
Query: 287 IMCALAKAEKFDEALQVI 304
++ L K + +E ++++
Sbjct: 427 VLSLLGKKSRSNEMIKML 444
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 114/258 (44%), Gaps = 40/258 (15%)
Query: 87 WKSALGLFKWASLHSN---FQHSPESYDMMVDILGR-------MKVMDKLR--------- 127
W+ A+ LF+W L SN + + ++ V ILGR K++DK+
Sbjct: 152 WERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVR 211
Query: 128 -------------------DLLDQMRCEGSIITLNTIAKVMRRFVGAGQ-WADAVRIFDD 167
DL ++M+ G TL T ++ F G+ W + + D+
Sbjct: 212 AYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDE 271
Query: 168 LQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRR 226
+++ GL+ + + + +L +E + +A++ + ELK P T+N + + K
Sbjct: 272 MRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGV 331
Query: 227 VEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTI 286
EA ++EM+ C ++Y+ ++ Y + +++ M + PN +TYT
Sbjct: 332 YTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTT 391
Query: 287 IMCALAKAEKFDEALQVI 304
++ A KA K DEAL++
Sbjct: 392 VIDAYGKAGKEDEALKLF 409
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 149/345 (43%), Gaps = 68/345 (19%)
Query: 19 IASCGARG--------FRHQEQC---------QSLMRSVDILTSKVAKGSSEEEIIRSLC 61
+A CG +G FR + C +L+ + S+V E+ R+
Sbjct: 463 LALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGF 522
Query: 62 NDQACDAIHLSPNLINILLRRYKDDWKSALGLFKWASLHS-NFQHSPESYDMMV------ 114
N AC + + L+N L R K DW+S + + + S F+ + SY +M+
Sbjct: 523 N--ACVTTYNA--LLNALAR--KGDWRSGENVI--SDMKSKGFKPTETSYSLMLQCYAKG 574
Query: 115 -DILGRMKVMDKLRD-------------LLDQMRCE---GS---------------IITL 142
+ LG ++ +++++ LL +C GS ++
Sbjct: 575 GNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIF 634
Query: 143 NTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE 202
N++ + R + A I + ++ GL + + N L+D + +A +I
Sbjct: 635 NSMLSIFTR---NNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKT 691
Query: 203 L-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQN 261
L K + P+ ++N I G+C+ ++EA + EM G RPC+ +Y+T + Y
Sbjct: 692 LEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGM 751
Query: 262 FSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
F+++ ++++ M DC PN +T+ +++ +A K+ EA+ + +
Sbjct: 752 FAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSK 796
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 79/168 (47%), Gaps = 1/168 (0%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
++ M+ I R + D+ +L+ +R +G L T +M +V G+ A I L+
Sbjct: 634 FNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLE 693
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVE 228
L+ + S N ++ C+ +++A ++ E+ + I P T+N F+ G+ +
Sbjct: 694 KSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFA 753
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQD 276
E I+ M CRP +++ ++ YC +S+ + + +++ D
Sbjct: 754 EIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFD 801
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/191 (18%), Positives = 84/191 (43%), Gaps = 3/191 (1%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y ++D G+ D+ L M+ G + T V+ + + +++ D+
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQ-ARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRR 226
++ G N + N +L LC + +++ +++ E+K P+ TFN I + +
Sbjct: 448 KSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGS 506
Query: 227 VEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTI 286
+A EM G CV +Y+ ++ + ++ ++ +M+++ P +Y++
Sbjct: 507 EVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSL 566
Query: 287 IMCALAKAEKF 297
++ AK +
Sbjct: 567 MLQCYAKGGNY 577
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 118/260 (45%), Gaps = 29/260 (11%)
Query: 69 IHLSPNLINILLRRYKDDWKSALGLFKWASLH-SNFQHSPESYDMMVDIL---------- 117
I L+P + +L R ++D H NF+H+ S M+ IL
Sbjct: 74 IRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQ 133
Query: 118 ------------GRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
R+++++ L S+ L ++R +V A + +A F
Sbjct: 134 SCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDL-----LIRTYVQARKLREAHEAF 188
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKI 224
L++ G + ++ N L+ +L + +VE A +Y E+ + + N +T NI ++ CK
Sbjct: 189 TLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKD 248
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
++E+ + +++ G P +++Y+T+I Y ++ + +EL++ M + SP V TY
Sbjct: 249 GKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTY 308
Query: 285 TIIMCALAKAEKFDEALQVI 304
++ L K K++ A +V
Sbjct: 309 NTVINGLCKHGKYERAKEVF 328
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 98/196 (50%), Gaps = 3/196 (1%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVM-RRFVGAGQWADAVRIFDDL 168
+ M+ + R +DK + ++ E +I N I ++ + + G + A+ + +++
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVK-EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEM 436
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRV 227
G + + N +L LCK + + +A +++ E+ + + P+++T I I G CK+ +
Sbjct: 437 LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNL 496
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
+ A Q+MK R V++Y+T++ + + E+ +M +++ P ++Y+I+
Sbjct: 497 QNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSIL 556
Query: 288 MCALAKAEKFDEALQV 303
+ AL EA +V
Sbjct: 557 VNALCSKGHLAEAFRV 572
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 127/299 (42%), Gaps = 10/299 (3%)
Query: 12 SLFSRLAIASCGARGFRHQEQCQSLMRSVDILTSKVAKGSSEEEIIR--------SLCND 63
S+F L AR R + +L+RS S A + ++R + +
Sbjct: 166 SVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQE 225
Query: 64 QACDAIHLSPNLINILLRRY-KDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKV 122
+ + ++ +NI++ KD +G F +Y+ ++ +
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 123 MDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNL 182
M++ +L++ M +G + T V+ G++ A +F ++ GL ++ +
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 183 LLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYG 241
LL CK+ V + +++ +++ + + P+ F+ + + + +++A +K G
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 242 CRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
P + Y+ +IQ YC + S L +EM Q C+ +VVTY I+ L K + EA
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 464
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 93/189 (49%), Gaps = 4/189 (2%)
Query: 96 WASLHSN-FQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVG 154
WA + S +P SY ++V+ L + + + D+M + T+ +++ +
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCR 597
Query: 155 AGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH---IAPNA 211
+G +D + + + G + S N L+ +EE + +A + ++++ + P+
Sbjct: 598 SGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDV 657
Query: 212 HTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDE 271
T+N +HG+C+ +++EA +++M G P +Y+ +I + ++ N ++ + + DE
Sbjct: 658 FTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDE 717
Query: 272 MQAQDCSPN 280
M + SP+
Sbjct: 718 MLQRGFSPD 726
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/240 (17%), Positives = 103/240 (42%), Gaps = 36/240 (15%)
Query: 98 SLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQ 157
S SN + +D+++ + + + + + +R +G ++++ ++ V G
Sbjct: 156 STFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGW 215
Query: 158 WADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVE---------QARQIYLELKQH-- 206
A ++ ++ G+ N ++N++++ LCK+ +E Q + +Y ++ +
Sbjct: 216 VELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNT 275
Query: 207 -------------------------IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYG 241
+P +T+N I+G CK + E A EM G
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
Query: 242 CRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEAL 301
P +Y +++ C + + + ++ +M+++D P++V ++ +M ++ D+AL
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 74/152 (48%), Gaps = 1/152 (0%)
Query: 156 GQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTF 214
G +A+ +F ++ + + + N LLD K ++ A++I+ ++ + I P ++
Sbjct: 494 GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISY 553
Query: 215 NIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQA 274
+I ++ C + EA EM +P V+ +++I+ YC N S L++M +
Sbjct: 554 SILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMIS 613
Query: 275 QDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+ P+ ++Y ++ + E +A ++++
Sbjct: 614 EGFVPDCISYNTLIYGFVREENMSKAFGLVKK 645
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/204 (17%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+ ++D G++ +D +++ M + + T + + ++ G A+A R++D++
Sbjct: 517 TYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEM 576
Query: 169 QTLGLEKNTESMNLLLDTLCK-------EEFVEQARQIYLELKQHIAPNAHTFNIFIHGW 221
+ ++ N ++ C+ E F+E+ + + P+ ++N I+G+
Sbjct: 577 ISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM------ISEGFVPDCISYNTLIYGF 630
Query: 222 CKIRRVEEAHWTIQEMK--GYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSP 279
+ + +A +++M+ G P V +Y++I+ +C + + +L +M + +P
Sbjct: 631 VREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNP 690
Query: 280 NVVTYTIIMCALAKAEKFDEALQV 303
+ TYT ++ + EA ++
Sbjct: 691 DRSTYTCMINGFVSQDNLTEAFRI 714
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 103/233 (44%), Gaps = 36/233 (15%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
Y +++D L + +D +L ++M +G + ++R F AG+W D ++ D+
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 170 T-----------------------------------LGLEKNTESMNLLLDTLCKEEFVE 194
G+ +T + L+D CKE ++
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 195 QARQIY-LELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTII 253
+A + L + + PN TFNI I+G+CK +++ ++M G ++Y+T+I
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 254 QCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
Q +C EL EM ++ P++V+Y I++ L + ++AL++ E+
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 75/158 (47%), Gaps = 1/158 (0%)
Query: 144 TIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL 203
T ++ F Q A + D + + G N + N+L++ CK ++ +++ ++
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 204 K-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNF 262
+ + + T+N I G+C++ ++E A QEM RP ++SY ++ C+
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEP 473
Query: 263 SKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
K E+ ++++ ++ Y II+ + A K D+A
Sbjct: 474 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 86/174 (49%), Gaps = 1/174 (0%)
Query: 128 DLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTL 187
+L+D+M G TL T+ ++ G+ +DAV + D + G + N + +L +
Sbjct: 163 ELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVM 222
Query: 188 CKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCV 246
CK A ++ ++++ I +A ++I I G CK ++ A EM+ G + +
Sbjct: 223 CKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 282
Query: 247 ISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
I Y+T+I+ +C + +LL +M + +P+VV ++ ++ K K EA
Sbjct: 283 IIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 89/198 (44%), Gaps = 3/198 (1%)
Query: 106 SPES--YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVR 163
SP++ Y ++D + +DK +LD M +G + T ++ + A D +
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE 408
Query: 164 IFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWC 222
+F + G+ +T + N L+ C+ +E A++++ E+ + + P+ ++ I + G C
Sbjct: 409 LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468
Query: 223 KIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVV 282
E+A ++++ + Y+ II CN ++L + + P+V
Sbjct: 469 DNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVK 528
Query: 283 TYTIIMCALAKAEKFDEA 300
TY I++ L K EA
Sbjct: 529 TYNIMIGGLCKKGSLSEA 546
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 9/199 (4%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
+ + ++ R K D + DL QM +G L T++ ++ + + A +
Sbjct: 75 FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKII 134
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAH-----TFNIFIHGWCKI 224
LG E +T + + L++ LC E V +A LEL + H T N ++G C
Sbjct: 135 KLGYEPDTVTFSTLINGLCLEGRVSEA----LELVDRMVEMGHKPTLITLNALVNGLCLN 190
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
+V +A I M G +P ++Y +++ C + ELL +M+ + + V Y
Sbjct: 191 GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKY 250
Query: 285 TIIMCALAKAEKFDEALQV 303
+II+ L K D A +
Sbjct: 251 SIIIDGLCKDGSLDNAFNL 269
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 107/231 (46%), Gaps = 12/231 (5%)
Query: 72 SPNL--INILLRRY--KDDWKSALGLFKWASLHSNFQHSPESYDMMVDI---LGRMKVMD 124
PN+ NIL+ Y + L LF+ SL + +Y+ ++ LG+++V
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV-TYNTLIQGFCELGKLEVAK 442
Query: 125 KLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLL 184
+L + R I++ + + G+ A+ IF+ ++ +E + N+++
Sbjct: 443 ELFQEMVSRRVRPDIVSYKIL---LDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499
Query: 185 DTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCR 243
+C V+ A ++ L + + P+ T+NI I G CK + EA ++M+ G
Sbjct: 500 HGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHS 559
Query: 244 PCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKA 294
P +Y+ +I+ + E + +K +L++E++ S + T +++ L+
Sbjct: 560 PNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDG 610
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 12/144 (8%)
Query: 163 RIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWC 222
R+ D + + T+ +L+LD LCK+ +ELK IA N +T +I I+ C
Sbjct: 71 RLIDFSRLFSVVARTKQYDLVLD-LCKQ----------MELK-GIAHNLYTLSIMINCCC 118
Query: 223 KIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVV 282
+ R++ A + ++ G P +++ST+I C E S+ EL+D M P ++
Sbjct: 119 RCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLI 178
Query: 283 TYTIIMCALAKAEKFDEALQVIER 306
T ++ L K +A+ +I+R
Sbjct: 179 TLNALVNGLCLNGKVSDAVLLIDR 202
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%)
Query: 203 LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNF 262
+K P+ TF+ I+G C RV EA + M G +P +I+ + ++ C
Sbjct: 134 IKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKV 193
Query: 263 SKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
S L+D M PN VTY ++ + K+ + A++++ +
Sbjct: 194 SDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK 237
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 135/296 (45%), Gaps = 35/296 (11%)
Query: 30 QEQCQSLMRS--VDILTSKVAKGSSEEEIIRSLCNDQACDAIHLSPNLINILLRRYKDDW 87
Q C ++++ +IL KV G + I + ++ + + + P+L W
Sbjct: 15 QSICATVLKGNWKNILKHKVDSGLLKSAITTQVISELSLFSGYGGPSL----------SW 64
Query: 88 KSALGLFKWASLHSNFQHSPESYDMMVDILGRMK-------VMDKL--RDLLDQMRCEGS 138
F W + +HS +S M+ IL + K ++DKL R+LL S
Sbjct: 65 ----SFFIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRS 120
Query: 139 II---------TLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCK 189
++ + + +M + AG D++ +F+ +++ GL+ + ++ +LL++L K
Sbjct: 121 LVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVK 180
Query: 190 EEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVIS 248
+ + +I+ ++ K + N H +N+ +H K E+A + EM+ G P + +
Sbjct: 181 QRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFT 240
Query: 249 YSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
Y+T+I YC + + + D M+ +PN+VTY + ++ + EA ++
Sbjct: 241 YNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLF 296
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 94/197 (47%), Gaps = 6/197 (3%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEG---SIITLNTIAKVMRRFVGAGQWADAVRIFD 166
Y+++V + +K LL +M +G I T NT+ V + +A+ + D
Sbjct: 206 YNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISV---YCKKSMHFEALSVQD 262
Query: 167 DLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRR 226
++ G+ N + N + +E + +A +++ E+K + N T+ I G+C++
Sbjct: 263 RMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMND 322
Query: 227 VEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTI 286
++EA + M+ G P V++Y++I++ C + + LL EM + P+ +T
Sbjct: 323 IDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNT 382
Query: 287 IMCALAKAEKFDEALQV 303
++ A K E A++V
Sbjct: 383 LINAYCKIEDMVSAVKV 399
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 94/190 (49%), Gaps = 2/190 (1%)
Query: 112 MMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTL 171
++++ L + ++ D + + +M G + ++ ++ +G A ++ +++
Sbjct: 173 VLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEK 232
Query: 172 GLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEA 230
G+ + + N L+ CK+ +A + +++ +APN T+N FIHG+ + R+ EA
Sbjct: 233 GVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREA 292
Query: 231 HWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCA 290
+E+K ++Y+T+I YC + + L + M+++ SP VVTY I+
Sbjct: 293 TRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRK 351
Query: 291 LAKAEKFDEA 300
L + + EA
Sbjct: 352 LCEDGRIREA 361
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 98/201 (48%), Gaps = 7/201 (3%)
Query: 109 SYDMMVDILGRMKVMD---KLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
+Y ++D RM +D +LR++++ ++T N+I +R+ G+ +A R+
Sbjct: 309 TYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSI---LRKLCEDGRIREANRLL 365
Query: 166 DDLQTLGLEKNTESMNLLLDTLCK-EEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKI 224
++ +E + + N L++ CK E+ V + ++ + + +++ IHG+CK+
Sbjct: 366 TEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKV 425
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
+E A + M G P +YS ++ + N+ ++ +LL+E + + +V Y
Sbjct: 426 LELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALY 485
Query: 285 TIIMCALAKAEKFDEALQVIE 305
++ + K E+ D A + E
Sbjct: 486 RGLIRRICKLEQVDYAKVLFE 506
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 91/181 (50%), Gaps = 5/181 (2%)
Query: 126 LRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLD 185
LRD++ + R E ++IT + FV G+ +A +++ + + + + + L++
Sbjct: 246 LRDMMKR-RIEPNVITFTALIDA---FVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301
Query: 186 TLCKEEFVEQARQI-YLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRP 244
LC +++ARQ+ YL + PN + IHG+CK +RVE+ EM G
Sbjct: 302 GLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA 361
Query: 245 CVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
I+Y+ +IQ YC E+ ++M ++ P++ TY +++ L K ++AL +
Sbjct: 362 NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIF 421
Query: 305 E 305
E
Sbjct: 422 E 422
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 101/220 (45%), Gaps = 2/220 (0%)
Query: 88 KSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAK 147
+ A+ LF L F+ + +Y ++ L + + ++ +L +QM GS + T
Sbjct: 170 EDAIALFDQI-LGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228
Query: 148 VMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY-LELKQH 206
++ G+W DA + D+ +E N + L+D K + +A+++Y + ++
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS 288
Query: 207 IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVY 266
+ P+ T+ I+G C ++EA M+ GC P + Y+T+I +C +
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348
Query: 267 ELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
++ EM + N +TYT+++ + D A +V +
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 92/188 (48%), Gaps = 14/188 (7%)
Query: 114 VDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGL 173
+D+ RM L ++D R L+ IAK+ R + + +F+ +Q LG+
Sbjct: 68 LDLFTRMVHSRPLPSIIDFTR------LLSVIAKMNR-------YDVVISLFEQMQILGI 114
Query: 174 EKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHW 232
+ N+++ +C +A ++ K P+ TF ++G+C R+E+A
Sbjct: 115 PPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIA 174
Query: 233 TIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALA 292
++ G G +P V++Y+T+I+C C ++ + EL ++M PNVVTY ++ L
Sbjct: 175 LFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLC 234
Query: 293 KAEKFDEA 300
+ ++ +A
Sbjct: 235 EIGRWGDA 242
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 91/215 (42%), Gaps = 2/215 (0%)
Query: 87 WKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIA 146
+ AL LF +HS S + ++ ++ +M D + L +QM+ G L T
Sbjct: 64 FNDALDLFT-RMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 147 KVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQ 205
VM + Q A + LG E + + LL+ C +E A ++ + L
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 206 HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKV 265
PN T+ I CK R + A +M G RP V++Y+ ++ C +
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 266 YELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
LL +M + PNV+T+T ++ A K K EA
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEA 277
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 1/177 (0%)
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
L +M G L T ++ + + DA+ +FD + +G + N + L+ LC
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199
Query: 189 KEEFVEQARQIYLELKQHIA-PNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
K + A +++ ++ + + PN T+N + G C+I R +A W +++M P VI
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+++ +I + + EL + M P+V TY ++ L DEA Q+
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF 316
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 88/193 (45%), Gaps = 1/193 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y +++ L ++D+ R + M G ++ F + + D ++IF ++
Sbjct: 295 TYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEM 354
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAP-NAHTFNIFIHGWCKIRRV 227
G+ NT + +L+ C + A++++ ++ AP + T+N+ + G C +V
Sbjct: 355 SQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKV 414
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
E+A + M+ +++Y+ IIQ C ++L + ++ PNV+TYT +
Sbjct: 415 EKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTM 474
Query: 288 MCALAKAEKFDEA 300
+ + EA
Sbjct: 475 ISGFCRRGLIHEA 487
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 2/165 (1%)
Query: 121 KVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESM 180
+V D ++ + +M +G + T +++ + G+ A +F+ + + + +
Sbjct: 343 RVEDGMK-IFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTY 401
Query: 181 NLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKG 239
N+LLD LC VE+A I+ + K+ + N T+ I I G CK+ +VE+A +
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS 461
Query: 240 YGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
G +P VI+Y+T+I +C + L +M+ PN Y
Sbjct: 462 KGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 86/169 (50%), Gaps = 4/169 (2%)
Query: 138 SIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQAR 197
++I NT+ K + G +A ++ +++ GL ++ N+L++ LCK V A
Sbjct: 390 NVILYNTLIKGLSN---QGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD 446
Query: 198 Q-IYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCY 256
+ + + + P+ TFNI IHG+ ++E A + M G P V +Y++++
Sbjct: 447 GLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGL 506
Query: 257 CNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
C F V E M + C+PN+ T+ I++ +L + K DEAL ++E
Sbjct: 507 CKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLE 555
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 111/238 (46%), Gaps = 3/238 (1%)
Query: 71 LSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLL 130
L P + +++ KD K AL +F F+H+ +Y +++ LG + + ++L
Sbjct: 5 LLPKHVTAVIKCQKDPMK-ALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVL 63
Query: 131 DQMRCE-GSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCK 189
MR G+ + M+ + G+ +AV +F+ + E S N ++ L
Sbjct: 64 VDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVD 123
Query: 190 EEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVIS 248
+ +QA ++Y+ ++ + I P+ ++F I + +CK R A + M GC V++
Sbjct: 124 SGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVA 183
Query: 249 YSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
Y T++ + E ++ YEL +M A S + T+ ++ L K E +++++
Sbjct: 184 YCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDK 241
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 96/198 (48%), Gaps = 8/198 (4%)
Query: 108 ESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDD 167
++++++V+ L +M + L+ M +G + T ++ + + +A+ I D
Sbjct: 427 QTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDV 486
Query: 168 LQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRR 226
+ G++ + + N LL+ LCK E + Y + ++ APN TFNI + C+ R+
Sbjct: 487 MLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRK 546
Query: 227 VEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEM-QAQDCSPNVVTYT 285
++EA ++EMK P +++ T+I +C + Y L +M +A S + TY
Sbjct: 547 LDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYN 606
Query: 286 IIMCALAKAEKFDEALQV 303
II+ A F E L V
Sbjct: 607 IIIHA------FTEKLNV 618
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 103/225 (45%), Gaps = 2/225 (0%)
Query: 83 YKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITL 142
++ + AL LF A L + + Y+ ++ L ++ + L ++M +G I +
Sbjct: 368 HEGETNRALALFNEA-LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEV 426
Query: 143 NTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY-L 201
T ++ G +DA + + + G + + N+L+ + +E A +I +
Sbjct: 427 QTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDV 486
Query: 202 ELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQN 261
L + P+ +T+N ++G CK + E+ T + M GC P + +++ +++ C +
Sbjct: 487 MLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRK 546
Query: 262 FSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+ LL+EM+ + +P+ VT+ ++ K D A + +
Sbjct: 547 LDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRK 591
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 3/177 (1%)
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
LLD++ G + L T ++ G+ AVR+ L G + + + N L+ LC
Sbjct: 238 LLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLC 297
Query: 189 KEEFVEQARQIYLE--LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCV 246
K ++A ++YL + + + P+++T+N I G+CK V+ A + + G P
Sbjct: 298 KNSKFQEA-EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQ 356
Query: 247 ISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
+Y ++I C+E ++ L +E + PNV+ Y ++ L+ EA Q+
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQL 413
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 1/167 (0%)
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
LL+ M +G + + V+ F A+ +F + G+ + N LL LC
Sbjct: 168 LLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLC 227
Query: 189 KEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
K+ V++ ++ + +K+ + PN T+N+FI G C+ ++ A + + G +P VI
Sbjct: 228 KKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVI 287
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKA 294
+Y+ +I C F + L +M + P+ TY ++ K
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKG 334
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 172 GLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEA 230
GLE ++ + N L+ CK V+ A +I + + P+ T+ I G C A
Sbjct: 316 GLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRA 375
Query: 231 HWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCA 290
E G G +P VI Y+T+I+ N+ + +L +EM + P V T+ I++
Sbjct: 376 LALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNG 435
Query: 291 LAK 293
L K
Sbjct: 436 LCK 438
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/187 (19%), Positives = 88/187 (47%), Gaps = 6/187 (3%)
Query: 122 VMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMN 181
VM+ + ++++ C ++ T N + + + R+ + +A+ + ++++ + + +
Sbjct: 515 VMETYKTMVEK-GCAPNLFTFNILLESLCRYR---KLDEALGLLEEMKNKSVNPDAVTFG 570
Query: 182 LLLDTLCKEEFVEQARQIYLELKQ--HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKG 239
L+D CK ++ A ++ ++++ ++ + T+NI IH + + V A QEM
Sbjct: 571 TLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVD 630
Query: 240 YGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDE 299
P +Y ++ +C N + Y+ L EM P++ T ++ L ++ E
Sbjct: 631 RCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYE 690
Query: 300 ALQVIER 306
A +I R
Sbjct: 691 AAGIIHR 697
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/189 (19%), Positives = 85/189 (44%), Gaps = 5/189 (2%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+++++++ L R + +D+ LL++M+ + T ++ F G A +F +
Sbjct: 533 TFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
Query: 169 Q-TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRR 226
+ + +T + N+++ ++ V A +++ E+ + P+ +T+ + + G+CK
Sbjct: 593 EEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGN 652
Query: 227 VEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTI 286
V + + EM G P + + +I C C E + ++ M + P V
Sbjct: 653 VNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN--- 709
Query: 287 IMCALAKAE 295
+C + K E
Sbjct: 710 TICDVDKKE 718
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 102/198 (51%), Gaps = 1/198 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y +V+ L + + L+++M G T ++R G +++ + L
Sbjct: 143 AYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERL 202
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRV 227
GL N + + LL+ KE ++A ++ E+ + PN ++N+ + G+CK R
Sbjct: 203 MQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRT 262
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
++A +E+ G + V+SY+ +++C C + + + LL EM D +P+VVTY I+
Sbjct: 263 DDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNIL 322
Query: 288 MCALAKAEKFDEALQVIE 305
+ +LA + ++ALQV++
Sbjct: 323 INSLAFHGRTEQALQVLK 340
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 3/200 (1%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y +++ + + D+ LLD++ +G L + ++ F G+ DA+ +F +L
Sbjct: 213 TYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFREL 272
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRV 227
G + N S N+LL LC + E+A + E+ AP+ T+NI I+ R
Sbjct: 273 PAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRT 332
Query: 228 EEAHWTIQEM-KG-YGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYT 285
E+A ++EM KG + R SY+ +I C E V + LDEM + C PN TY
Sbjct: 333 EQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYN 392
Query: 286 IIMCALAKAEKFDEALQVIE 305
I K EA +I+
Sbjct: 393 AIGSLCEHNSKVQEAFYIIQ 412
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 76/151 (50%), Gaps = 1/151 (0%)
Query: 155 AGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAP-NAHT 213
A + A+R+ + + + G+ + + L++ LCK V A Q+ +++ H P N T
Sbjct: 119 ANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVT 178
Query: 214 FNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQ 273
+N + G C + + ++ ++ + G P +YS +++ E+ + +LLDE+
Sbjct: 179 YNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEII 238
Query: 274 AQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+ PN+V+Y +++ K + D+A+ +
Sbjct: 239 VKGGEPNLVSYNVLLTGFCKEGRTDDAMALF 269
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 74/148 (50%), Gaps = 1/148 (0%)
Query: 159 ADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQA-RQIYLELKQHIAPNAHTFNIF 217
+D+ + L T G + N LL LCK +++A R I L + I P+A +
Sbjct: 88 SDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYL 147
Query: 218 IHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDC 277
++ CK V A +++M+ +G ++Y+ +++ C + ++ + ++ + +
Sbjct: 148 VNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGL 207
Query: 278 SPNVVTYTIIMCALAKAEKFDEALQVIE 305
+PN TY+ ++ A K DEA+++++
Sbjct: 208 APNAFTYSFLLEAAYKERGTDEAVKLLD 235
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 1/160 (0%)
Query: 148 VMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-H 206
V+ R+ +A+ D + GL+ N ++L+L CK + +A + + E + +
Sbjct: 324 VIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMN 383
Query: 207 IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVY 266
I + +N+ K+ RVEEA +QEMK G P VI+Y+T+I YC +
Sbjct: 384 IFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDAL 443
Query: 267 ELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+L+DEM SP+++TY +++ LA+ +E L++ ER
Sbjct: 444 DLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYER 483
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 85/173 (49%), Gaps = 1/173 (0%)
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
LD+M +G + ++ +++ + +A+ F + + + + + N+ D L
Sbjct: 340 FLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALS 399
Query: 189 KEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
K VE+A ++ E+K + I P+ + I G+C +V +A I EM G G P +I
Sbjct: 400 KLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLI 459
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
+Y+ ++ + +V E+ + M+A+ PN VT ++I+ L A K EA
Sbjct: 460 TYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEA 512
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 183 LLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYG 241
L +LC E ++E+A + ++ + + P I +CK+ V EA M G
Sbjct: 562 LFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERG 621
Query: 242 CRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
P + +Y+ +I YC K L ++M+ + P+VVTYT+++
Sbjct: 622 LIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLL 668
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 183 LLDTLCKEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYG 241
++ CK V +A+ ++ +++ + P+ T+ I IH +C++ +++A ++MK G
Sbjct: 597 MIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRG 656
Query: 242 CRPCVISYSTIIQCYC-------------NEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
+P V++Y+ ++ Y E K E+L E A +VV YT+++
Sbjct: 657 IKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLI 716
Query: 289 CALAKAEKFDEALQVIER 306
K ++A ++ +R
Sbjct: 717 DRQCKMNNLEQAAELFDR 734
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 78/159 (49%), Gaps = 5/159 (3%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
Y++ D L ++ +++ +LL +M+ G + + ++ + G+ DA+ + D++
Sbjct: 391 YNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMI 450
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVE 228
G+ + + N+L+ L + E+ +IY +K + PNA T ++ I G C R+V+
Sbjct: 451 GNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVK 510
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYE 267
EA ++ + C + ++ ++ YC K Y+
Sbjct: 511 EAEDFFSSLE----QKCPENKASFVKGYCEAGLSKKAYK 545
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 93/220 (42%), Gaps = 42/220 (19%)
Query: 121 KVMDKLRDLLDQMRCEG---SIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNT 177
KV+D L DL+D+M G +IT N + + R G + + I++ ++ G + N
Sbjct: 438 KVVDAL-DLIDEMIGNGMSPDLITYNVLVSGLAR---NGHEEEVLEIYERMKAEGPKPNA 493
Query: 178 ESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCK-------------- 223
+ +++++ LC V++A + L+Q N +F + G+C+
Sbjct: 494 VTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASF---VKGYCEAGLSKKAYKAFVRL 550
Query: 224 ---IRR---------------VEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKV 265
+R+ +E+AH +++M Y P +I +C N +
Sbjct: 551 EYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREA 610
Query: 266 YELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
L D M + P++ TYTI++ + + +A + E
Sbjct: 611 QVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFE 650
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 84/198 (42%), Gaps = 18/198 (9%)
Query: 123 MDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNL 182
++K D+L +M + K++ F +A +FD + GL + + +
Sbjct: 572 LEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTI 631
Query: 183 LLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWT-------- 233
++ T C+ +++A ++ ++KQ I P+ T+ + + + K+ E H T
Sbjct: 632 MIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLD--PEHHETCSVQGEVG 689
Query: 234 -------IQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTI 286
++E G V+ Y+ +I C N + EL D M P++V YT
Sbjct: 690 KRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTT 749
Query: 287 IMCALAKAEKFDEALQVI 304
++ + + D A+ ++
Sbjct: 750 LISSYFRKGYIDMAVTLV 767
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 108/202 (53%), Gaps = 7/202 (3%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMR---CEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
+Y+ ++D R ++ ++++ +M+ + +++T+NTI M R G AV F
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNM---AVVFF 464
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKI 224
D++ G++ N + L+ C VE+A Y + L+ +P+A + I G C++
Sbjct: 465 MDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
RR +A ++++K G +++Y+ +I +C++ N KVYE+L +M+ + P+ +TY
Sbjct: 525 RRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITY 584
Query: 285 TIIMCALAKAEKFDEALQVIER 306
++ K + F+ +++E+
Sbjct: 585 NTLISFFGKHKDFESVERMMEQ 606
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 98/195 (50%), Gaps = 10/195 (5%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGS---IITLNTIAKVMRRFVGAGQWADAV-RI 164
+Y+M++ + +K+ ++L M EG IT NT+ F G + ++V R+
Sbjct: 548 AYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLIS----FFGKHKDFESVERM 603
Query: 165 FDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH--IAPNAHTFNIFIHGWC 222
+ ++ GL+ + ++D C +++A +++ ++ H + PN +NI I+ +
Sbjct: 604 MEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFS 663
Query: 223 KIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVV 282
K+ +A +EMK RP V +Y+ + +C + + +L+DEM Q C PN +
Sbjct: 664 KLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQI 723
Query: 283 TYTIIMCALAKAEKF 297
T I+M L+ +++
Sbjct: 724 TMEILMERLSGSDEL 738
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 102/205 (49%), Gaps = 25/205 (12%)
Query: 110 YDMMVDILGRMKVMDKLRDL---LDQMRCEGSIITL----NTIAKVMRRFVGAGQWADAV 162
++ ++ LGR + ++ DL +D+++ ++TL NT+ K R +A+
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRR-------VDEAL 349
Query: 163 RIFDDLQTLG------LEKNTESMNLLLDTLCKEEFVEQARQ--IYLELKQHIAPNAHTF 214
+F+ ++ ++ ++ N L+D LCK +++A + + ++L++ PNA T+
Sbjct: 350 EVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTY 409
Query: 215 NIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQA 274
N I G+C+ ++E A + MK +P V++ +TI+ C + +M+
Sbjct: 410 NCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEK 469
Query: 275 QDCSPNVVTYTIIM---CALAKAEK 296
+ NVVTY ++ C+++ EK
Sbjct: 470 EGVKGNVVTYMTLIHACCSVSNVEK 494
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Query: 160 DAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFI 218
DA+R+ + L+ G + + N+L+ C + E+ ++ ++ K+ P++ T+N I
Sbjct: 529 DAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLI 588
Query: 219 HGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQD-C 277
+ K + E +++M+ G P V +Y +I YC+ + +L +M
Sbjct: 589 SFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKV 648
Query: 278 SPNVVTYTIIMCALAKAEKFDEALQVIE 305
+PN V Y I++ A +K F +AL + E
Sbjct: 649 NPNTVIYNILINAFSKLGNFGQALSLKE 676
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 108/202 (53%), Gaps = 7/202 (3%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMR---CEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
+Y+ ++D R ++ ++++ +M+ + +++T+NTI M R G AV F
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNM---AVVFF 464
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKI 224
D++ G++ N + L+ C VE+A Y + L+ +P+A + I G C++
Sbjct: 465 MDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
RR +A ++++K G +++Y+ +I +C++ N KVYE+L +M+ + P+ +TY
Sbjct: 525 RRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITY 584
Query: 285 TIIMCALAKAEKFDEALQVIER 306
++ K + F+ +++E+
Sbjct: 585 NTLISFFGKHKDFESVERMMEQ 606
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 98/195 (50%), Gaps = 10/195 (5%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGS---IITLNTIAKVMRRFVGAGQWADAV-RI 164
+Y+M++ + +K+ ++L M EG IT NT+ F G + ++V R+
Sbjct: 548 AYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLIS----FFGKHKDFESVERM 603
Query: 165 FDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH--IAPNAHTFNIFIHGWC 222
+ ++ GL+ + ++D C +++A +++ ++ H + PN +NI I+ +
Sbjct: 604 MEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFS 663
Query: 223 KIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVV 282
K+ +A +EMK RP V +Y+ + +C + + +L+DEM Q C PN +
Sbjct: 664 KLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQI 723
Query: 283 TYTIIMCALAKAEKF 297
T I+M L+ +++
Sbjct: 724 TMEILMERLSGSDEL 738
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 139/283 (49%), Gaps = 37/283 (13%)
Query: 39 SVDILTSKVAKGS--SEEEIIRSLCNDQACDAIHLSPNLINILLRRYKDDW-KSALGLFK 95
+ DI+ +V KG +EE+II +L + + + SPN ++ L R+ K+A
Sbjct: 224 TADIVLHEVWKGRLLTEEKII-ALISRFSSHGV--SPN--SVWLTRFISSLCKNARANAA 278
Query: 96 WASLHSNFQH-SP---ESYDMMVDILGRMKVMDKLRDL---LDQMRCEGSIITL----NT 144
W L ++ +P ++ ++ LGR + ++ DL +D+++ ++TL NT
Sbjct: 279 WDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINT 338
Query: 145 IAKVMRRFVGAGQWADAVRIFDDLQTLG------LEKNTESMNLLLDTLCKEEFVEQARQ 198
+ K R +A+ +F+ ++ ++ ++ N L+D LCK +++A +
Sbjct: 339 LCKSRR-------VDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEE 391
Query: 199 --IYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCY 256
+ ++L++ APNA T+N I G+C+ ++E A + MK +P V++ +TI+
Sbjct: 392 LLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGM 451
Query: 257 CNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM---CALAKAEK 296
C + +M+ + NVVTY ++ C+++ EK
Sbjct: 452 CRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Query: 160 DAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFI 218
DA+R+ + L+ G + + N+L+ C + E+ ++ ++ K+ P++ T+N I
Sbjct: 529 DAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLI 588
Query: 219 HGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQD-C 277
+ K + E +++M+ G P V +Y +I YC+ + +L +M
Sbjct: 589 SFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKV 648
Query: 278 SPNVVTYTIIMCALAKAEKFDEALQVIE 305
+PN V Y I++ A +K F +AL + E
Sbjct: 649 NPNTVIYNILINAFSKLGNFGQALSLKE 676
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 108/202 (53%), Gaps = 7/202 (3%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMR---CEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
+Y+ ++D R ++ ++++ +M+ + +++T+NTI M R G AV F
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNM---AVVFF 464
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKI 224
D++ G++ N + L+ C VE+A Y + L+ +P+A + I G C++
Sbjct: 465 MDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
RR +A ++++K G +++Y+ +I +C++ N KVYE+L +M+ + P+ +TY
Sbjct: 525 RRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITY 584
Query: 285 TIIMCALAKAEKFDEALQVIER 306
++ K + F+ +++E+
Sbjct: 585 NTLISFFGKHKDFESVERMMEQ 606
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 102/205 (49%), Gaps = 25/205 (12%)
Query: 110 YDMMVDILGRMKVMDKLRDL---LDQMRCEGSIITL----NTIAKVMRRFVGAGQWADAV 162
++ ++ LGR + ++ DL +D+++ ++TL NT+ K R +A+
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRR-------VDEAL 349
Query: 163 RIFDDLQTLG------LEKNTESMNLLLDTLCKEEFVEQARQ--IYLELKQHIAPNAHTF 214
+F+ ++ ++ ++ N L+D LCK +++A + + ++L++ PNA T+
Sbjct: 350 EVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTY 409
Query: 215 NIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQA 274
N I G+C+ ++E A + MK +P V++ +TI+ C + +M+
Sbjct: 410 NCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEK 469
Query: 275 QDCSPNVVTYTIIM---CALAKAEK 296
+ NVVTY ++ C+++ EK
Sbjct: 470 EGVKGNVVTYMTLIHACCSVSNVEK 494
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Query: 160 DAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFI 218
DA+R+ + L+ G + + N+L+ C + E+ ++ ++ K+ P++ T+N I
Sbjct: 529 DAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLI 588
Query: 219 HGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQD-C 277
+ K + E +++M+ G P V +Y +I YC+ + +L +M
Sbjct: 589 SFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKV 648
Query: 278 SPNVVTYTIIMCALAKAEKFDEALQVIE 305
+PN V Y I++ A +K F +AL + E
Sbjct: 649 NPNTVIYNILINAFSKLGNFGQALSLKE 676
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 84/170 (49%), Gaps = 10/170 (5%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGS---IITLNTIAKVMRRFVGAGQWADAV-RI 164
+Y+M++ + +K+ ++L M EG IT NT+ F G + ++V R+
Sbjct: 548 AYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLIS----FFGKHKDFESVERM 603
Query: 165 FDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH--IAPNAHTFNIFIHGWC 222
+ ++ GL+ + ++D C +++A +++ ++ H + PN +NI I+ +
Sbjct: 604 MEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFS 663
Query: 223 KIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEM 272
K+ +A +EMK RP V +Y+ + +C + + +L+DEM
Sbjct: 664 KLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEM 713
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 108/234 (46%), Gaps = 44/234 (18%)
Query: 99 LHSNFQHSPESYDMMVDIL-------GRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRR 151
LH N SP + DI G+ V ++ + +++ + +++T NT+ + R
Sbjct: 119 LHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVR 178
Query: 152 FVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQA--------------- 196
+ + + A +FDD+ +G+ N ++ N+L++ C E +E A
Sbjct: 179 YPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNP 238
Query: 197 ---------------------RQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTI 234
+++ L++K++ + PN T+N ++G+CK+ ++EA +
Sbjct: 239 DNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIV 298
Query: 235 QEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
+ MK P + +Y+ +I CN + + EL+D M++ P+VVTY ++
Sbjct: 299 ELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLI 352
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 117/256 (45%), Gaps = 32/256 (12%)
Query: 56 IIRSLCNDQACDAIHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVD 115
I+ +LC ++ D H NL+N +R F +Y ++
Sbjct: 457 ILDALCKERKLDEAH---NLLNSAHKR-------------------GFIVDEVTYGTLIM 494
Query: 116 ILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEK 175
R + ++K ++ D+M+ T++T ++ G+ A+ FD+L GL
Sbjct: 495 GFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLP 554
Query: 176 NTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEA---- 230
+ + N ++ CKE VE+A + Y E +K P+ +T NI ++G CK E+A
Sbjct: 555 DDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFF 614
Query: 231 HWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCA 290
+ I+E + ++Y+T+I +C ++ + Y+LL EM+ + P+ TY +
Sbjct: 615 NTLIEERE-----VDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISL 669
Query: 291 LAKAEKFDEALQVIER 306
L + K E +++++
Sbjct: 670 LMEDGKLSETDELLKK 685
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 39/220 (17%)
Query: 119 RMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTE 178
R V K+++L+D I+T +T+ K ++ G + A+ + ++ G++ NT
Sbjct: 396 REAVTRKVKELVDMHGFSPDIVTYHTLIKA---YLKVGDLSGALEMMREMGQKGIKMNTI 452
Query: 179 SMNLLLDTLCKE-----------------------------------EFVEQARQIYLEL 203
++N +LD LCKE E VE+A +++ E+
Sbjct: 453 TLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEM 512
Query: 204 KQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNF 262
K+ I P TFN I G C + E A E+ G P ++++II YC E
Sbjct: 513 KKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRV 572
Query: 263 SKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQ 302
K +E +E P+ T I++ L K ++AL
Sbjct: 573 EKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALN 612
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 125/284 (44%), Gaps = 43/284 (15%)
Query: 58 RSLCNDQACDAIHLSPNLINILLRRY--KDDWKSALGLFKWASLHSNFQHSPE--SYDMM 113
R + +D + L+ N+L+ Y + + ALG+ + + S F+ +P+ +Y+ +
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLE--RMVSEFKVNPDNVTYNTI 246
Query: 114 VDILGRMKVMDKLRDLLDQMRCEGSI---ITLNT----------------IAKVMRR--- 151
+ + + + L++LL M+ G + +T N I ++M++
Sbjct: 247 LKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNV 306
Query: 152 -------------FVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQ 198
AG + + + D +++L L+ + + N L+D + +AR+
Sbjct: 307 LPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARK 366
Query: 199 IYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKG-YGCRPCVISYSTIIQCY 256
+ +++ + N T NI + CK + E ++E+ +G P +++Y T+I+ Y
Sbjct: 367 LMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAY 426
Query: 257 CNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
+ S E++ EM + N +T I+ AL K K DEA
Sbjct: 427 LKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEA 470
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 97/200 (48%), Gaps = 8/200 (4%)
Query: 109 SYDMMVDIL---GRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
+Y+++++ L G M+ +L D + ++ + ++T NT+ G +A ++
Sbjct: 312 TYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFEL---GLSLEARKLM 368
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL--KQHIAPNAHTFNIFIHGWCK 223
+ ++ G++ N + N+ L LCKEE E + EL +P+ T++ I + K
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428
Query: 224 IRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVT 283
+ + A ++EM G + I+ +TI+ C E+ + + LL+ + + VT
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488
Query: 284 YTIIMCALAKAEKFDEALQV 303
Y ++ + EK ++AL++
Sbjct: 489 YGTLIMGFFREEKVEKALEM 508
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 123/297 (41%), Gaps = 78/297 (26%)
Query: 69 IHLSPNLI--NILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVM--- 123
+ L PNL+ N LL +GL ++ S S + E +D MV I + V
Sbjct: 160 LKLKPNLLTCNTLL----------IGLVRYPSSFS-ISSAREVFDDMVKIGVSLNVQTFN 208
Query: 124 ---------DKLRD---LLDQMRCEGSI----ITLNTIAKVMRRFVGAGQWADAVRIFDD 167
KL D +L++M E + +T NTI K M + G+ +D + D
Sbjct: 209 VLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSK---KGRLSDLKELLLD 265
Query: 168 LQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRR 226
++ GL N + N L+ CK +++A QI +KQ ++ P+ T+NI I+G C
Sbjct: 266 MKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGS 325
Query: 227 VEEAHWTIQEMKGYGCRPCVISYSTIIQ-CY----------------------------- 256
+ E + MK +P V++Y+T+I C+
Sbjct: 326 MREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNI 385
Query: 257 -----CNEQN----FSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
C E+ KV EL+D SP++VTY ++ A K AL+++
Sbjct: 386 SLKWLCKEEKREAVTRKVKELVD---MHGFSPDIVTYHTLIKAYLKVGDLSGALEMM 439
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 68/146 (46%)
Query: 130 LDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCK 189
D++ G + +T ++ + G+ A +++ + + + N+LL+ LCK
Sbjct: 544 FDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCK 603
Query: 190 EEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISY 249
E E+A + L + + T+N I +CK ++++EA+ + EM+ G P +Y
Sbjct: 604 EGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTY 663
Query: 250 STIIQCYCNEQNFSKVYELLDEMQAQ 275
++ I + S+ ELL + +
Sbjct: 664 NSFISLLMEDGKLSETDELLKKFSGK 689
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 55/305 (18%)
Query: 56 IIRSLCNDQACDAIH----------LSPN--LINILLRRYKDDWKSALGLFKWASLHSNF 103
+IR+LC+ DA PN IL+R Y + GL ++ S F
Sbjct: 153 LIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMES-F 211
Query: 104 QHSPES--YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADA 161
P Y+ +V R D ++++MR EG + + T + G+ DA
Sbjct: 212 GVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDA 271
Query: 162 VRIFDDLQT---LGLEK-NTESMNLLLDTLCKEEFVEQARQIYLELKQH----------- 206
RIF D++ LGL + N+ + NL+L CK +E A+ ++ ++++
Sbjct: 272 SRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNI 331
Query: 207 -------------------------IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYG 241
I P+ +++NI + G CK+ + +A + MK G
Sbjct: 332 WLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNG 391
Query: 242 CRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEAL 301
P ++Y ++ YC+ LL EM +C PN T I++ +L K + EA
Sbjct: 392 VCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAE 451
Query: 302 QVIER 306
+++ +
Sbjct: 452 ELLRK 456
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 89/179 (49%), Gaps = 4/179 (2%)
Query: 128 DLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTL 187
D L + C +IT +T+ + AG++A+A +F ++ L+ ++ + N+ +
Sbjct: 513 DSLIENNCLPDLITYSTL---LNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHF 569
Query: 188 CKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCV 246
CK+ + A ++ ++ K+ + T+N I G ++ E H + EMK G P +
Sbjct: 570 CKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNI 629
Query: 247 ISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+Y+T IQ C + LLDEM ++ +PNV ++ ++ A K FD A +V E
Sbjct: 630 CTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFE 688
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 101/198 (51%), Gaps = 1/198 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y++M+ ++ +++ + L + +R + +L + ++ V G++ +A + +
Sbjct: 293 TYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQM 352
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRV 227
G+ + S N+L+D LCK + A+ I +K++ + P+A T+ +HG+C + +V
Sbjct: 353 TDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKV 412
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
+ A +QEM C P + + ++ S+ ELL +M + + VT II
Sbjct: 413 DAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNII 472
Query: 288 MCALAKAEKFDEALQVIE 305
+ L + + D+A+++++
Sbjct: 473 VDGLCGSGELDKAIEIVK 490
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 74/142 (52%), Gaps = 1/142 (0%)
Query: 164 IFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWC 222
++ D+ G+ T + NLL+ LC V+ AR+++ E+ + PN TF I + G+C
Sbjct: 134 LYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYC 193
Query: 223 KIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVV 282
K ++ + M+ +G P + Y+TI+ +C E +++++M+ + P++V
Sbjct: 194 KAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIV 253
Query: 283 TYTIIMCALAKAEKFDEALQVI 304
T+ + AL K K +A ++
Sbjct: 254 TFNSRISALCKEGKVLDASRIF 275
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 110/225 (48%), Gaps = 26/225 (11%)
Query: 107 PESY--DMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRI 164
P +Y ++++ L +M + + +LL +M +G + T ++ G+G+ A+ I
Sbjct: 429 PNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEI 488
Query: 165 FDDLQTLG-------------------LEKN----TESMNLLLDTLCKEEFVEQARQIYL 201
++ G +E N + + LL+ LCK +A+ ++
Sbjct: 489 VKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFA 548
Query: 202 EL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQ 260
E+ + + P++ +NIFIH +CK ++ A +++M+ GC + +Y+++I +
Sbjct: 549 EMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKN 608
Query: 261 NFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+++ L+DEM+ + SPN+ TY + L + EK ++A +++
Sbjct: 609 QIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLD 653
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
Query: 181 NLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKG 239
NLLL++ KE VE +Y ++ IAP +TFN+ I C V+ A EM
Sbjct: 116 NLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPE 175
Query: 240 YGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDE 299
GC+P ++ +++ YC K ELL+ M++ PN V Y I+ + + + D+
Sbjct: 176 KGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDD 235
Query: 300 ALQVIER 306
+ +++E+
Sbjct: 236 SEKMVEK 242
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 100/209 (47%), Gaps = 9/209 (4%)
Query: 106 SPESY--DMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVR 163
+P++Y ++++ L +D R+L D+M +G T ++R + AG +
Sbjct: 144 APQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLE 203
Query: 164 IFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWC 222
+ + +++ G+ N N ++ + C+E + + ++ ++++ + P+ TFN I C
Sbjct: 204 LLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALC 263
Query: 223 KIRRVEEAHWTIQEMK-----GYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDC 277
K +V +A +M+ G RP I+Y+ +++ +C L + ++ D
Sbjct: 264 KEGKVLDASRIFSDMELDEYLGL-PRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDD 322
Query: 278 SPNVVTYTIIMCALAKAEKFDEALQVIER 306
++ +Y I + L + KF EA V+++
Sbjct: 323 LASLQSYNIWLQGLVRHGKFIEAETVLKQ 351
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%)
Query: 209 PNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYEL 268
P+ + +N+ + K RRVE W ++M G P +++ +I+ C+ EL
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 269 LDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
DEM + C PN T+ I++ KA D+ L+++
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELL 205
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 85/165 (51%), Gaps = 1/165 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
SY +++ R K L ++MR +G ++ + T +++ F+ G + A ++ D +
Sbjct: 327 SYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQM 386
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRV 227
LGL + +LD LCK V++A ++ ++ +H I P+A ++N I G C+ RV
Sbjct: 387 TELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRV 446
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEM 272
EA ++MKG C P +++ II + S Y++ D+M
Sbjct: 447 TEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQM 491
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 123/259 (47%), Gaps = 17/259 (6%)
Query: 53 EEEIIRSLCNDQACDAIHLSPNLI--NILLRRYKDD--WKSALGLFKWASLHSNFQHSPE 108
+ E ++S + C+ P+L+ N+LL Y D+ K A G+ + S Q
Sbjct: 238 KAEALKSYMSKIGCE-----PDLVTYNVLLNYYYDNNMLKRAEGVMA-EMVRSGIQLDAY 291
Query: 109 SYDMMVDILGRMKVMDKLRD-LLDQMRCEG--SIITLNTIAKVMRRFVGAGQWADAVRIF 165
SY+ ++ R+ DK + ++ +M G +++ +T+ + F A A R+F
Sbjct: 292 SYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTL---IETFCRASNTRKAYRLF 348
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKI 224
++++ G+ N + L+ +E A+++ ++ + ++P+ + + CK
Sbjct: 349 EEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKS 408
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
V++A+ +M + P ISY+++I C ++ +L ++M+ ++C P+ +T+
Sbjct: 409 GNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTF 468
Query: 285 TIIMCALAKAEKFDEALQV 303
I+ L + +K A +V
Sbjct: 469 KFIIGGLIRGKKLSAAYKV 487
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 89/191 (46%), Gaps = 10/191 (5%)
Query: 118 GRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNT 177
GR++ + L+ + ++ CE ++T N + + + A + ++ G++ +
Sbjct: 234 GRIEKAEALKSYMSKIGCEPDLVTYNVL---LNYYYDNNMLKRAEGVMAEMVRSGIQLDA 290
Query: 178 ESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAH----TFNIFIHGWCKIRRVEEAHWT 233
S N LL C+ V + Y + + + P +++ I +C+ +A+
Sbjct: 291 YSYNQLLKRHCR---VSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRL 347
Query: 234 IQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAK 293
+EM+ G V++Y+++I+ + E N S +LLD+M SP+ + YT I+ L K
Sbjct: 348 FEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCK 407
Query: 294 AEKFDEALQVI 304
+ D+A V
Sbjct: 408 SGNVDKAYGVF 418
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 74/153 (48%), Gaps = 1/153 (0%)
Query: 152 FVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPN 210
V +G +AV++FD+++ + N + L +E E A IY ++K +
Sbjct: 19 LVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLI 78
Query: 211 AHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLD 270
T++ FI G CK+++ + + +M+ G P + +++ + C E +
Sbjct: 79 PFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFF 138
Query: 271 EMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
M + P+VV+YTI++ L +A K +A+++
Sbjct: 139 CMVQRGREPDVVSYTILINGLFRAGKVTDAVEI 171
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 77/145 (53%), Gaps = 5/145 (3%)
Query: 152 FVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPN 210
F AG+ A + + +G E + + N+LL+ +++A + E+ + I +
Sbjct: 230 FCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLD 289
Query: 211 AHTFNIFIHGWCKIRRVEEAH-WTIQEMKGYGCRPC-VISYSTIIQCYCNEQNFSKVYEL 268
A+++N + C++ ++ + + ++EM+ G C V+SYST+I+ +C N K Y L
Sbjct: 290 AYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF--CDVVSYSTLIETFCRASNTRKAYRL 347
Query: 269 LDEMQAQDCSPNVVTYTIIMCALAK 293
+EM+ + NVVTYT ++ A +
Sbjct: 348 FEEMRQKGMVMNVVTYTSLIKAFLR 372
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 179 SMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEM 237
S + L++T C+ +A +++ E++Q + N T+ I + + A + +M
Sbjct: 327 SYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQM 386
Query: 238 KGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKF 297
G P I Y+TI+ C N K Y + ++M + +P+ ++Y ++ L ++ +
Sbjct: 387 TELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRV 446
Query: 298 DEALQVIE 305
EA+++ E
Sbjct: 447 TEAIKLFE 454
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 155 AGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE--LKQHIAPNAH 212
AG+ DAV I++ + G+ + ++ L+ LC V+ A ++ E + +
Sbjct: 162 AGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTV 221
Query: 213 TFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEM 272
+N I G+CK R+E+A M GC P +++Y+ ++ Y + + ++ EM
Sbjct: 222 VYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEM 281
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 121/251 (48%), Gaps = 4/251 (1%)
Query: 57 IRSLCNDQACDAIHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDI 116
++ + D+ + L NLI L R D+ A+ +F S +Y+ M+++
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIE--LSRRLCDYSKAISIFSRLK-RSGITPDLVAYNSMINV 269
Query: 117 LGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKN 176
G+ K+ + R L+ +M G + + + ++ +V ++ +A+ +F +++ + +
Sbjct: 270 YGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALD 329
Query: 177 TESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQ 235
+ N+++D + + V++A +++ L K I PN ++N + + + EA +
Sbjct: 330 LTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFR 389
Query: 236 EMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAE 295
M+ V++Y+T+I+ Y K L+ EMQ++ PN +TY+ I+ KA
Sbjct: 390 LMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAG 449
Query: 296 KFDEALQVIER 306
K D A + ++
Sbjct: 450 KLDRAATLFQK 460
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 11/198 (5%)
Query: 111 DMMVDILGRM---KVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDD 167
++M+D+ G++ K D+L L +M E ++++ NTI +V + A + +A+ +F
Sbjct: 334 NIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRV---YGEAELFGEAIHLFRL 390
Query: 168 LQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRR 226
+Q +E+N + N ++ K E+A + E++ I PNA T++ I W K +
Sbjct: 391 MQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGK 450
Query: 227 VEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTI 286
++ A Q+++ G + Y T+I Y LL E++ D P TI
Sbjct: 451 LDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITI 510
Query: 287 IMCALAKAEKFDEALQVI 304
LAKA + +EA V
Sbjct: 511 ----LAKAGRTEEATWVF 524
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 107/237 (45%), Gaps = 14/237 (5%)
Query: 71 LSPNLI--NILLRRYKDD--WKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKL 126
+ PN++ N +LR Y + + A+ LF+ + + + +Y+ M+ I G+ +K
Sbjct: 361 IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQ-RKDIEQNVVTYNTMIKIYGKTMEHEKA 419
Query: 127 RDLLDQMRCEG---SIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLL 183
+L+ +M+ G + IT +TI + + AG+ A +F L++ G+E + +
Sbjct: 420 TNLVQEMQSRGIEPNAITYSTIISIWGK---AGKLDRAATLFQKLRSSGVEIDQVLYQTM 476
Query: 184 LDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCR 243
+ + + A+++ ELK P+ I K R EEA W ++ G
Sbjct: 477 IVAYERVGLMGHAKRLLHELK---LPDNIPRETAITILAKAGRTEEATWVFRQAFESGEV 533
Query: 244 PCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
+ + +I Y Q + V E+ ++M+ P+ +++ A K +F++A
Sbjct: 534 KDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKA 590
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 104/282 (36%), Gaps = 78/282 (27%)
Query: 98 SLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEG----SIITLNTIAKVMRRFV 153
SL S ++ S MV +L R + LLD + E S+ N V+R +
Sbjct: 110 SLLSTYKDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNV---VLRNVL 166
Query: 154 GAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKE----------------------- 190
A Q+ A +FD+++ L + + + L+ + KE
Sbjct: 167 RAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLV 226
Query: 191 ---EFVEQARQ---------IYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEM 237
+E +R+ I+ LK+ I P+ +N I+ + K + EA I+EM
Sbjct: 227 LYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEM 286
Query: 238 KGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCS------------------- 278
G P +SYST++ Y F + + EM+ +C+
Sbjct: 287 NEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMV 346
Query: 279 ----------------PNVVTYTIIMCALAKAEKFDEALQVI 304
PNVV+Y I+ +AE F EA+ +
Sbjct: 347 KEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLF 388
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 114/257 (44%), Gaps = 13/257 (5%)
Query: 58 RSLCNDQACDAIHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPE--SYDMMVD 115
+S +C + L+N+L+ R + A +FK + H P SY ++
Sbjct: 34 KSCVEGSSCRTVRSRTKLMNVLIERGRPH--EAQTVFK---TLAETGHRPSLISYTTLLA 88
Query: 116 ILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEK 175
+ K + ++ ++ G+ + V+ F +G DAV+ ++ LGL
Sbjct: 89 AMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNP 148
Query: 176 NTESMNLLLDTLC---KEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAH 231
T + N L+ K E + + LE + PN TFN+ + WCK ++VEEA
Sbjct: 149 TTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAW 208
Query: 232 WTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKV-YELLDEM-QAQDCSPNVVTYTIIMC 289
+++M+ G RP ++Y+TI CY + + E++++M + PN T I++
Sbjct: 209 EVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVG 268
Query: 290 ALAKAEKFDEALQVIER 306
+ + + L+ + R
Sbjct: 269 GYCREGRVRDGLRFVRR 285
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 88/196 (44%), Gaps = 12/196 (6%)
Query: 116 ILGRMKVMDKLRDLLDQM-------RCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
I G ++VMD RD +D++ + +IT +T VM + AG A ++F ++
Sbjct: 302 INGFVEVMD--RDGIDEVLTLMKECNVKADVITYST---VMNAWSSAGYMEKAAQVFKEM 356
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVE 228
G++ + + ++L + + ++A ++ L PN F I GWC ++
Sbjct: 357 VKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMD 416
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
+A +M +G P + ++ T++ Y + K E+L M+ P T+ ++
Sbjct: 417 DAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLA 476
Query: 289 CALAKAEKFDEALQVI 304
A A DE+ + I
Sbjct: 477 EAWRVAGLTDESNKAI 492
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 99/198 (50%), Gaps = 26/198 (13%)
Query: 121 KVMDKLRDL--LDQMRCEGSIITLNTI----AKVMRRFVGAGQWADAVRIFDDLQTLGLE 174
+V D LR + + +MR E +++ N++ +VM R D + D++ TL E
Sbjct: 275 RVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDR--------DGI---DEVLTLMKE 323
Query: 175 KNTE----SMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEE 229
N + + + +++ ++E+A Q++ E+ K + P+AH ++I G+ + + ++
Sbjct: 324 CNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKK 383
Query: 230 AHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMC 289
A ++ + RP V+ ++T+I +C+ + + ++M SPN+ T+ +M
Sbjct: 384 AEELLETLI-VESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMW 442
Query: 290 ALAKAE---KFDEALQVI 304
+ + K +E LQ++
Sbjct: 443 GYLEVKQPWKAEEVLQMM 460
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 99/219 (45%), Gaps = 8/219 (3%)
Query: 93 LFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSI---ITLNTIAKVM 149
L K L N S +Y+ ++ G ++ +LLD M EG++ + T ++
Sbjct: 138 LLKMKELGLNPTTS--TYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLV 195
Query: 150 RRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE---LKQH 206
+ + + +A + ++ G+ +T + N + ++ +A +E +K+
Sbjct: 196 QAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEK 255
Query: 207 IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVY 266
PN T I + G+C+ RV + ++ MK ++ ++++I + + +
Sbjct: 256 AKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGID 315
Query: 267 ELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
E+L M+ + +V+TY+ +M A + A ++A QV +
Sbjct: 316 EVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFK 354
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 114/257 (44%), Gaps = 13/257 (5%)
Query: 58 RSLCNDQACDAIHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPE--SYDMMVD 115
+S +C + L+N+L+ R + A +FK + H P SY ++
Sbjct: 34 KSCVEGSSCRTVRSRTKLMNVLIERGRPH--EAQTVFK---TLAETGHRPSLISYTTLLA 88
Query: 116 ILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEK 175
+ K + ++ ++ G+ + V+ F +G DAV+ ++ LGL
Sbjct: 89 AMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNP 148
Query: 176 NTESMNLLLDTLC---KEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAH 231
T + N L+ K E + + LE + PN TFN+ + WCK ++VEEA
Sbjct: 149 TTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAW 208
Query: 232 WTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKV-YELLDEM-QAQDCSPNVVTYTIIMC 289
+++M+ G RP ++Y+TI CY + + E++++M + PN T I++
Sbjct: 209 EVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVG 268
Query: 290 ALAKAEKFDEALQVIER 306
+ + + L+ + R
Sbjct: 269 GYCREGRVRDGLRFVRR 285
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 90/196 (45%), Gaps = 3/196 (1%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
S++ V+++G K+ ++ L+ + + +IT +T VM + AG A ++F ++
Sbjct: 325 SFNEEVELVGNQKMKVQVLTLMKECNVKADVITYST---VMNAWSSAGYMEKAAQVFKEM 381
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVE 228
G++ + + ++L + + ++A ++ L PN F I GWC ++
Sbjct: 382 VKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMD 441
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
+A +M +G P + ++ T++ Y + K E+L M+ P T+ ++
Sbjct: 442 DAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLA 501
Query: 289 CALAKAEKFDEALQVI 304
A A DE+ + I
Sbjct: 502 EAWRVAGLTDESNKAI 517
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 97/193 (50%), Gaps = 13/193 (6%)
Query: 116 ILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEK 175
I G ++VMD RD +D++ +++ N +++ G V++ ++ ++
Sbjct: 302 INGFVEVMD--RDGIDEVTLTLLLMSFNEEVELV------GNQKMKVQVLTLMKECNVKA 353
Query: 176 NTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTI 234
+ + + +++ ++E+A Q++ E+ K + P+AH ++I G+ + + ++A +
Sbjct: 354 DVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELL 413
Query: 235 QEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKA 294
+ + RP V+ ++T+I +C+ + + ++M SPN+ T+ +M +
Sbjct: 414 ETLI-VESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEV 472
Query: 295 E---KFDEALQVI 304
+ K +E LQ++
Sbjct: 473 KQPWKAEEVLQMM 485
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 93/189 (49%), Gaps = 4/189 (2%)
Query: 118 GRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNT 177
GR + D L + + + + +IT N + FV G++ DA +++++ + + N
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDA---FVKEGKFLDAEELYNEMIRMSIAPNI 282
Query: 178 ESMNLLLDTLCKEEFVEQARQI-YLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQE 236
+ L++ C E V++ARQ+ YL + P+ + I+G+CK ++V++A E
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342
Query: 237 MKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEK 296
M G I+Y+T+IQ + + E+ M ++ PN+ TY +++ L K
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGK 402
Query: 297 FDEALQVIE 305
+AL + E
Sbjct: 403 VKKALMIFE 411
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 91/196 (46%), Gaps = 1/196 (0%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
Y ++D L + ++ L DQM G + ++ +G+W DA + +
Sbjct: 180 YTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMT 239
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVE 228
++ + + N L+D KE A ++Y E+ + IAPN T+ I+G+C V+
Sbjct: 240 KRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVD 299
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
EA M+ GC P V++Y+++I +C + ++ EM + + N +TYT ++
Sbjct: 300 EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359
Query: 289 CALAKAEKFDEALQVI 304
+ K + A +V
Sbjct: 360 QGFGQVGKPNVAQEVF 375
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 81/166 (48%), Gaps = 20/166 (12%)
Query: 142 LNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYL 201
LN IAK M++F + + D LQ +G+ + + NLL++ C Q+ Q YL
Sbjct: 79 LNVIAK-MKKF------DVVINLCDHLQIMGVSHDLYTCNLLMNCFC------QSSQPYL 125
Query: 202 E-------LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQ 254
+K P+ TF I+G+C R+EEA + +M G +P V+ Y+TII
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 255 CYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
C + + L D+M+ P+VV YT ++ L + ++ +A
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 99/227 (43%), Gaps = 9/227 (3%)
Query: 83 YKDDWKSALGLFKWASLHSNFQHSPES--------YDMMVDILGRMKVMDKLRDLLDQMR 134
Y++ ++ L ++ F H ES + +++++ +MK D + +L D ++
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 135 CEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVE 194
G L T +M F + Q A + LG E + + L++ C +E
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 195 QARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTII 253
+A + ++ + I P+ + I CK V A +M+ YG RP V+ Y++++
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 254 QCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
CN + LL M + P+V+T+ ++ A K KF +A
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDA 266
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%), Gaps = 13/200 (6%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIA--KVMRRFVGAGQWADAVRIFD 166
+Y +++ + K +D + +M +G +T NTI +++ F G+ A +F
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKG--LTGNTITYTTLIQGFGQVGKPNVAQEVFS 376
Query: 167 DLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH----IAPNAHTFNIFIHGWC 222
+ + G+ N + N+LL LC V++A I+ ++++ +APN T+N+ +HG C
Sbjct: 377 HMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLC 436
Query: 223 KIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVV 282
++E+A ++M+ +I+Y+ IIQ C L + ++ PNVV
Sbjct: 437 YNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVV 496
Query: 283 TYTIIMCALAKAEKFDEALQ 302
TYT ++ L F E L+
Sbjct: 497 TYTTMISGL-----FREGLK 511
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 8/228 (3%)
Query: 83 YKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEG-SIIT 141
Y +DW+ AL F W S F+H+ E+++ ++DILG+ + L+++M S+
Sbjct: 57 YSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPN 116
Query: 142 LNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYL 201
T V +R+V A +A+ +D L L T N L+D LC+ + V +A ++
Sbjct: 117 HVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYN-LVDALCEHKHVVEAEELCF 175
Query: 202 ELKQHIA-----PNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCY 256
K I N N+ + GW K+ + ++M G + SYS +
Sbjct: 176 G-KNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIM 234
Query: 257 CNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
C K +L EM+++ +VV Y ++ A+ ++ + ++V
Sbjct: 235 CKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVF 282
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 4/160 (2%)
Query: 148 VMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QH 206
++R + G W + + T G+ K+ S ++ +D +CK +A ++Y E+K +
Sbjct: 195 ILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRR 254
Query: 207 IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVY 266
+ + +N I + VE +EM+ GC P V +++TII+ C + Y
Sbjct: 255 MKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAY 314
Query: 267 ELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+LDEM + C P+ +TY MC ++ EK E L + R
Sbjct: 315 RMLDEMPKRGCQPDSITY---MCLFSRLEKPSEILSLFGR 351
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 109/238 (45%), Gaps = 1/238 (0%)
Query: 69 IHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRD 128
I + +++ LLR + S LF SL S SY ++ +L K++ + D
Sbjct: 71 IETARGVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLNESKMISEAAD 130
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
L +R EG + +++ ++ V Q+ + +F ++ + +
Sbjct: 131 LFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAV 190
Query: 189 KEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
K V + +++ +K I P+ +N+ I G CK +R+ +A EM P +I
Sbjct: 191 KLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLI 250
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+Y+T+I YC N K +++ + M+A P+++T+ ++ L KA ++A V++
Sbjct: 251 TYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLK 308
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 108/234 (46%), Gaps = 37/234 (15%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+++ ++ L + +++ ++L +M+ G + T + + + + A+ +++
Sbjct: 286 TFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETA 345
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGWCK---- 223
G++ N + ++LL+ LCKE +E+A +I E+ + + PN +N I G+C+
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405
Query: 224 -------------------------IRR------VEEAHWTIQEMKGYGCRPCVISYSTI 252
IRR +E A + +MK G P V +Y+ +
Sbjct: 406 VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNIL 465
Query: 253 IQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
I Y + F K +++L EM+ PNVV+Y ++ L K K EA Q+++R
Sbjct: 466 IGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA-QIVKR 518
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 6/202 (2%)
Query: 106 SPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
S E+Y++++ GR DK D+L +M G++ + + ++ + +A +
Sbjct: 458 SVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 517
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKI 224
D++ G+ N+L+D C + +E A + E LK+ I N T+N I G
Sbjct: 518 RDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMT 577
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
++ EA + E+ G +P V +Y+++I Y N + L +EM+ P + TY
Sbjct: 578 GKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTY 637
Query: 285 TIIMCALAKAEKFDEALQVIER 306
+++ K E +++ ER
Sbjct: 638 HLLISLCTK-----EGIELTER 654
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 82/175 (46%), Gaps = 7/175 (4%)
Query: 125 KLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLL 184
K+R+ + E S+IT NT+ K + + AG DA + +++ LG + + ++L
Sbjct: 270 KVRERMKADHIEPSLITFNTLLKGLFK---AGMVEDAENVLKEMKDLGFVPDAFTFSILF 326
Query: 185 DTLCKEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCR 243
D E E A +Y + + NA+T +I ++ CK ++E+A + G
Sbjct: 327 DGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLV 386
Query: 244 PCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM---CALAKAE 295
P + Y+T+I YC + + ++ M+ Q P+ + Y ++ C L + E
Sbjct: 387 PNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEME 441
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 96/212 (45%), Gaps = 7/212 (3%)
Query: 99 LHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQM---RCEGSIITLNTIAKVMRRFVGA 155
L S+F+ S Y + ++ + K +L ++M R S+ N + + +
Sbjct: 171 LESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCK---G 227
Query: 156 GQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTF 214
+ DA ++FD++ L + + N L+D CK E++ ++ +K HI P+ TF
Sbjct: 228 KRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITF 287
Query: 215 NIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQA 274
N + G K VE+A ++EMK G P ++S + Y + + + +
Sbjct: 288 NTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVD 347
Query: 275 QDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
N T +I++ AL K K ++A +++ R
Sbjct: 348 SGVKMNAYTCSILLNALCKEGKIEKAEEILGR 379
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 109/230 (47%), Gaps = 4/230 (1%)
Query: 76 INILLRRYKDDWKS--ALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQM 133
+IL Y + K+ ALG+++ A + S + + + ++++ L + ++K ++L +
Sbjct: 322 FSILFDGYSSNEKAEAALGVYETA-VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGRE 380
Query: 134 RCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFV 193
+G + ++ + G A + ++ G++ + + N L+ C+ +
Sbjct: 381 MAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEM 440
Query: 194 EQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTI 252
E A + ++K + ++P+ T+NI I G+ + ++ ++EM+ G P V+SY T+
Sbjct: 441 ENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTL 500
Query: 253 IQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQ 302
I C C + + +M+ + SP V Y +++ K ++A +
Sbjct: 501 INCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFR 550
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 85/179 (47%), Gaps = 4/179 (2%)
Query: 117 LGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKN 176
LG M+ +K +++M+ +G ++ T ++ + ++ I +++ G N
Sbjct: 437 LGEMENAEKE---VNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPN 493
Query: 177 TESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQ 235
S L++ LCK + +A+ + +++ + ++P +N+ I G C ++E+A +
Sbjct: 494 VVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSK 553
Query: 236 EMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKA 294
EM G +++Y+T+I S+ +LL E+ + P+V TY ++ A
Sbjct: 554 EMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFA 612
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 88/180 (48%), Gaps = 3/180 (1%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+ ++D L + + DLL ++ +G + T ++ + AG + +++++
Sbjct: 566 TYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEM 625
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVE 228
+ G++ ++ +LL+ +LC +E +E +++ E+ + P+ +N +H + +E
Sbjct: 626 KRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEM--SLKPDLLVYNGVLHCYAVHGDME 682
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
+A ++M +Y+++I +V L+DEM A++ P TY II+
Sbjct: 683 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 1/208 (0%)
Query: 99 LHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQW 158
L F +Y++++ R+ D+L LLD+M +G L T ++ +
Sbjct: 249 LEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKP 308
Query: 159 ADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIF 217
A+ + + ++ +G+E L+D L + +E + E +K P+ + +
Sbjct: 309 LAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVM 368
Query: 218 IHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDC 277
I G+ +E+A +EM G P V +Y+++I+ +C F + LL EM+++ C
Sbjct: 369 ITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGC 428
Query: 278 SPNVVTYTIIMCALAKAEKFDEALQVIE 305
+PN V Y+ ++ L A K EA +V++
Sbjct: 429 NPNFVVYSTLVNNLKNAGKVLEAHEVVK 456
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 1/165 (0%)
Query: 141 TLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY 200
T N +M+ F G++ R+ D++ G + NLL+ T + + +
Sbjct: 151 TANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQF 210
Query: 201 LELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNE 259
++ K + P H++N +H +++ + W ++M G P V++Y+ ++
Sbjct: 211 IKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRL 270
Query: 260 QNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
++Y LLDEM SP++ TY I++ LA K AL ++
Sbjct: 271 GKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLL 315
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 114/240 (47%), Gaps = 12/240 (5%)
Query: 71 LSPNLINILLRRYKDDWKSALGLFKWASLHSN---FQHSPESYDMMVDILGRMKVMDKLR 127
LS N + +L+ ++ AL F W + +QHS +Y+ + +L R + +
Sbjct: 224 LSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFW 283
Query: 128 DLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTL 187
++D+M+ G + L+T KV R+F + A+ V++++ + + + + +LLL L
Sbjct: 284 SVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYL 343
Query: 188 CKE-----EFVEQARQIYLELKQHIAPNAHTFNIFIH-GWCKIRRVEEAHWTIQEMKGYG 241
+ V + + Y + ++ + IH + R +EA + M+ G
Sbjct: 344 SGSPNPDLDLVFRVSRKYESTGKSLSKAVYDG---IHRSLTSVGRFDEAEEITKAMRNAG 400
Query: 242 CRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEAL 301
P I+YS ++ C + + +LD+M+AQ C P++ T+TI++ K + D+AL
Sbjct: 401 YEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKAL 460
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 1/198 (0%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
Y+ ++D L ++ D+L M+ G + T ++ R +G W + RI D+
Sbjct: 187 YNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMM 246
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVE 228
+G+ + + + L+D KE + +A++ Y E+ Q + PN T+N I+G C ++
Sbjct: 247 RMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLD 306
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
EA + + G P ++Y+T+I YC + ++L M + TY +
Sbjct: 307 EAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLY 366
Query: 289 CALAKAEKFDEALQVIER 306
+A KF A +V+ R
Sbjct: 367 QGYCQAGKFSAAEKVLGR 384
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 99/227 (43%), Gaps = 12/227 (5%)
Query: 85 DDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNT 144
+ +++ + LF+ + H S+ ++D R + L +M G ++ T
Sbjct: 93 NKYEAVISLFRHLEM-LGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVT 151
Query: 145 IAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK 204
++ F ++ +A+ + D + LG E N N ++D+LC++ V A + +K
Sbjct: 152 FGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMK 211
Query: 205 Q-HIAPNAHTFNIFIHGWCKIRRVEEAHWTI-----QEMKGYGCRPCVISYSTIIQCYCN 258
+ I P+ T+N I R W + +M G P VI++S +I Y
Sbjct: 212 KMGIRPDVVTYNSLI-----TRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGK 266
Query: 259 EQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
E + + +EM + +PN+VTY ++ L DEA +V+
Sbjct: 267 EGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLN 313
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 93/201 (46%), Gaps = 9/201 (4%)
Query: 106 SPE--SYDMMVDILGRMKVMDKLRDLLDQM---RCEGSIITLNTIAKVMRRFVGAGQWAD 160
SP+ ++ ++D+ G+ + + + ++M +I+T N++ + G +
Sbjct: 251 SPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL---INGLCIHGLLDE 307
Query: 161 AVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIH 219
A ++ + L + G N + N L++ CK + V+ +I + + + + T+N
Sbjct: 308 AKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQ 367
Query: 220 GWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSP 279
G+C+ + A + M G P + +++ ++ C+ K L+++Q
Sbjct: 368 GYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVV 427
Query: 280 NVVTYTIIMCALAKAEKFDEA 300
++TY II+ L KA+K ++A
Sbjct: 428 GIITYNIIIKGLCKADKVEDA 448
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 90/193 (46%), Gaps = 1/193 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+ +++ L ++D+ + +L+ + +G T ++ + A + D ++I +
Sbjct: 291 TYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVM 350
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRV 227
G++ +T + N L C+ A ++ + + P+ +TFNI + G C ++
Sbjct: 351 SRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKI 410
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
+A +++++ +I+Y+ II+ C + L + + SP+V+TY +
Sbjct: 411 GKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITM 470
Query: 288 MCALAKAEKFDEA 300
M L + + EA
Sbjct: 471 MIGLRRKRLWREA 483
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 4/142 (2%)
Query: 136 EGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQ 195
+G T NT+ + + AG+++ A ++ + + G+ + + N+LLD LC + +
Sbjct: 356 DGDTFTYNTL---YQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGK 412
Query: 196 ARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQ 254
A +L K T+NI I G CK +VE+A + + G P VI+Y T++
Sbjct: 413 ALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMI 472
Query: 255 CYCNEQNFSKVYELLDEMQAQD 276
++ + + +EL +MQ +D
Sbjct: 473 GLRRKRLWREAHELYRKMQKED 494
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 72/150 (48%), Gaps = 1/150 (0%)
Query: 157 QWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFN 215
++ DA+ +F D+ + + LL + K E ++ L+ I+ + ++F
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 216 IFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQ 275
I +C+ R+ A + +M G P ++++ +++ +C+ F + L+D++
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 276 DCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
PNVV Y I+ +L + + + AL V++
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLK 208
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 96/199 (48%), Gaps = 7/199 (3%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEG---SIITLNTIAKVMRRFVGAGQWADAVRIF 165
+Y ++V+++ R + ++L+ M EG I+T N++ R G + +
Sbjct: 246 TYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCR---RGNLEEVASVI 302
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGWCKI 224
+ + GLE NT + N LL +LC E+ ++ +I + + P T+NI I+G CK
Sbjct: 303 QHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKA 362
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
R + A +M C P +++Y+T++ E ELL ++ C P ++TY
Sbjct: 363 RLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITY 422
Query: 285 TIIMCALAKAEKFDEALQV 303
++ LAK +AL++
Sbjct: 423 NSVIDGLAKKGLMKKALEL 441
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 100/205 (48%), Gaps = 23/205 (11%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQM---RCEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
+Y+++++ L + +++ + D QM +C I+T NT+ M + G DA+ +
Sbjct: 351 TYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSK---EGMVDDAIEL- 406
Query: 166 DDLQTLGLEKNT------ESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFI 218
LGL KNT + N ++D L K+ +++A ++Y + L I P+ T I
Sbjct: 407 -----LGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLI 461
Query: 219 HGWCKIRRVEEAHWTIQEM--KGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQD 276
+G+C+ VEEA ++E +G G R +Y +IQ C ++ E+++ M
Sbjct: 462 YGFCRANLVEEAGQVLKETSNRGNGIRGS--TYRLVIQGLCKKKEIEMAIEVVEIMLTGG 519
Query: 277 CSPNVVTYTIIMCALAKAEKFDEAL 301
C P+ YT I+ + + EA+
Sbjct: 520 CKPDETIYTAIVKGVEEMGMGSEAV 544
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 83/174 (47%), Gaps = 4/174 (2%)
Query: 132 QMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEE 191
Q C +IT + +++ R+ G+ A A+ + +D+ G + + N L++ C+
Sbjct: 237 QNGCPPFMITYTVLVELVCRYCGS---ARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRG 293
Query: 192 FVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYS 250
+E+ + + H + N T+N +H C +E + M P VI+Y+
Sbjct: 294 NLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYN 353
Query: 251 TIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+I C + S+ + +M Q C P++VTY ++ A++K D+A++++
Sbjct: 354 ILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELL 407
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 92/213 (43%), Gaps = 2/213 (0%)
Query: 93 LFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRF 152
L + + H+ H P S +V L R+ +DK +L M G + T ++
Sbjct: 126 LVEVMARHNQVPHFP-SCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNL 184
Query: 153 VGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNA 211
G A+ + +D+ G + + N ++ + EQA + + + L+ P
Sbjct: 185 CKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFM 244
Query: 212 HTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDE 271
T+ + + C+ A +++M GC P +++Y++++ C N +V ++
Sbjct: 245 ITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQH 304
Query: 272 MQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+ + N VTY ++ +L E +DE +++
Sbjct: 305 ILSHGLELNTVTYNTLLHSLCSHEYWDEVEEIL 337
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 73/161 (45%), Gaps = 1/161 (0%)
Query: 146 AKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK- 204
+ ++R Q A+ I + G +T + N+++ LCK+ + A + ++
Sbjct: 143 SNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSL 202
Query: 205 QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSK 264
P+ T+N I E+A ++ GC P +I+Y+ +++ C ++
Sbjct: 203 SGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSAR 262
Query: 265 VYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
E+L++M + C P++VTY ++ + +E VI+
Sbjct: 263 AIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQ 303
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 99/241 (41%), Gaps = 28/241 (11%)
Query: 86 DWKSALGLFK--------------------WASLHSNFQHSPESYDMMVDILGRMKVMDK 125
DWK +GL K A S F H Y + ++ R+K M +
Sbjct: 35 DWKQEIGLKKDVFFRCHGLLSSVCIDNVNDHAERSSEFHH----YGVGTNLRARVKPMKQ 90
Query: 126 LRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLD 185
D E T N +++ G+ DA ++ + + + S + L+
Sbjct: 91 FGLSSDGPITENDEETNN---EILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVR 147
Query: 186 TLCKEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRP 244
L + + +++A I + + P+ T+N+ I CK + A +++M G P
Sbjct: 148 GLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPP 207
Query: 245 CVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
VI+Y+T+I+C + N + + C P ++TYT+++ + + A++V+
Sbjct: 208 DVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVL 267
Query: 305 E 305
E
Sbjct: 268 E 268
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 1/161 (0%)
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
+ D G N +++ + A ++++ R + GL + S N ++D LC
Sbjct: 377 IFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLC 436
Query: 189 KEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
K +E A E++ + I+PN TFN F+ G+ V++ H ++++ +G +P VI
Sbjct: 437 KARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVI 496
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
++S II C C + ++ EM PN +TY I++
Sbjct: 497 TFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILI 537
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 4/202 (1%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
SY+ ++D L + + ++ L +M+ G L T + + G + + L
Sbjct: 427 SYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKL 486
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRV 227
G + + + +L+++ LC+ + ++ A + E L+ I PN T+NI I C
Sbjct: 487 LVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDT 546
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
+ + +MK G P + +Y+ IQ +C + K ELL M P+ TY+ +
Sbjct: 547 DRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTL 606
Query: 288 MCALAKAEKFDEALQV---IER 306
+ AL+++ + EA ++ IER
Sbjct: 607 IKALSESGRESEAREMFSSIER 628
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 88/169 (52%), Gaps = 7/169 (4%)
Query: 123 MDKLRDLLDQMRCEG---SIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTES 179
+ K+ +L+++ G +IT + I + R A + DA F ++ G+E N +
Sbjct: 476 VKKVHGVLEKLLVHGFKPDVITFSLIINCLCR---AKEIKDAFDCFKEMLEWGIEPNEIT 532
Query: 180 MNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMK 238
N+L+ + C +++ +++ ++K++ ++P+ + +N I +CK+R+V++A ++ M
Sbjct: 533 YNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTML 592
Query: 239 GYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
G +P +YST+I+ S+ E+ ++ C P+ T ++
Sbjct: 593 RIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLV 641
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Query: 164 IFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIA----PNAHTFNIFIH 219
+F + LG++ +T N ++D L K ++ A YL+ +Q + P+ T+NI IH
Sbjct: 167 VFAQISFLGMKPSTRLYNAVIDALVKSNSLDLA---YLKFQQMRSDGCKPDRFTYNILIH 223
Query: 220 GWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSP 279
G CK V+EA +++M+ G RP V +Y+ +I + + + L+ M+ + +P
Sbjct: 224 GVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNP 283
Query: 280 NVVT 283
N T
Sbjct: 284 NEAT 287
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%)
Query: 207 IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVY 266
+ P+ +N I K ++ A+ Q+M+ GC+P +Y+ +I C + +
Sbjct: 176 MKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAI 235
Query: 267 ELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
L+ +M+ + PNV TYTI++ A + DEAL+ +E
Sbjct: 236 RLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLE 274
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 85/181 (46%), Gaps = 4/181 (2%)
Query: 130 LDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCK 189
L QM +G + ++ + V+ A + +A ++Q G+ N + N L
Sbjct: 413 LKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSV 472
Query: 190 EEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVIS 248
V++ + +L H P+ TF++ I+ C+ + +++A +EM +G P I+
Sbjct: 473 RGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEIT 532
Query: 249 YSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM---CALAKAEKFDEALQVIE 305
Y+ +I+ C+ + + +L +M+ SP++ Y + C + K +K +E L+ +
Sbjct: 533 YNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTML 592
Query: 306 R 306
R
Sbjct: 593 R 593
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 99/202 (49%), Gaps = 5/202 (2%)
Query: 107 PESYDMMVDILGRMKVMDKLRDLL---DQMRCEGSIITLNTIAKVMRRFVGAGQWADAVR 163
P++Y + I G M+K+ + + D + G + + T + ++ A + +
Sbjct: 573 PDNYTYSILICGLFN-MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 164 IFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWC 222
FD++ + ++ NT N L+ C+ + A ++ ++K + I+PN+ T+ I G
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 223 KIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVV 282
I RVEEA +EM+ G P V Y+ +I Y KV LL EM +++ PN +
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 283 TYTIIMCALAKAEKFDEALQVI 304
TYT+++ A+ EA +++
Sbjct: 752 TYTVMIGGYARDGNVTEASRLL 773
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 97/199 (48%), Gaps = 18/199 (9%)
Query: 108 ESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDD 167
E++ + +ILGR VMD+ ++ NT+ + G + +A D+
Sbjct: 523 EAFRIQKEILGRGCVMDR--------------VSYNTL---ISGCCGKKKLDEAFMFLDE 565
Query: 168 LQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRR 226
+ GL+ + + ++L+ L VE+A Q + + K++ + P+ +T+++ I G CK R
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 625
Query: 227 VEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTI 286
EE EM +P + Y+ +I+ YC S EL ++M+ + SPN TYT
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685
Query: 287 IMCALAKAEKFDEALQVIE 305
++ ++ + +EA + E
Sbjct: 686 LIKGMSIISRVEEAKLLFE 704
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 101/229 (44%), Gaps = 36/229 (15%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
Y+ ++D ++K ++ D M +G +T +T +++ + GQ +A R+ ++
Sbjct: 368 YNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML 427
Query: 170 TLGLEKNTES-----------------------------------MNLLLDTLCKEEFVE 194
++G N S + L+ LCK
Sbjct: 428 SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHS 487
Query: 195 QARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTII 253
+A +++ + L + + T N +HG C+ +++EA +E+ G GC +SY+T+I
Sbjct: 488 KALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI 547
Query: 254 QCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQ 302
C ++ + + LDEM + P+ TY+I++C L K +EA+Q
Sbjct: 548 SGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ 596
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 99/197 (50%), Gaps = 5/197 (2%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIA--KVMRRFVGAGQWADAVRIFD 166
+Y +M+D + + ++ ++ D+M + + NT+ ++R + +G+ + A+ + +
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKN--VQPNTVVYNHLIRAYCRSGRLSMALELRE 669
Query: 167 DLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIR 225
D++ G+ N+ + L+ + VE+A+ ++ E++ + + PN + I G+ K+
Sbjct: 670 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 729
Query: 226 RVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYT 285
++ + ++EM P I+Y+ +I Y + N ++ LL+EM+ + P+ +TY
Sbjct: 730 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYK 789
Query: 286 IIMCALAKAEKFDEALQ 302
+ K EA +
Sbjct: 790 EFIYGYLKQGGVLEAFK 806
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 83/177 (46%), Gaps = 2/177 (1%)
Query: 128 DLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTL 187
D+ + +G + T ++ V A ++ FD + G+ + ++
Sbjct: 212 DVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAF 270
Query: 188 CKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCV 246
CK VE+A +++ ++++ +APN TFN I G R +EA ++M G P +
Sbjct: 271 CKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTL 330
Query: 247 ISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
I+YS +++ + Y +L EM + PNV+ Y ++ + +A ++A+++
Sbjct: 331 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 387
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 77/145 (53%)
Query: 161 AVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHG 220
A+ +F L G+ + + N+LL +L + ++ + + + + ++P+ + F I+
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINA 269
Query: 221 WCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPN 280
+CK +VEEA +M+ G P V++++T+I + + + ++M + P
Sbjct: 270 FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 329
Query: 281 VVTYTIIMCALAKAEKFDEALQVIE 305
++TY+I++ L +A++ +A V++
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLK 354
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 86/210 (40%), Gaps = 44/210 (20%)
Query: 135 CEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC-----K 189
C+G + + F G+ +AV++F ++ G+ N + N ++D L
Sbjct: 253 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 312
Query: 190 EEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI-- 247
E F+ + + + ++ + P T++I + G + +R+ +A++ ++EM G P VI
Sbjct: 313 EAFMFKEKMV----ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 368
Query: 248 ---------------------------------SYSTIIQCYCNEQNFSKVYELLDEMQA 274
+Y+T+I+ YC LL EM +
Sbjct: 369 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428
Query: 275 QDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+ N ++T ++C L FD AL+ +
Sbjct: 429 IGFNVNQGSFTSVICLLCSHLMFDSALRFV 458
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 90/196 (45%), Gaps = 1/196 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+++ ++D LG D+ ++M G TL T + +++ A + DA + ++
Sbjct: 297 TFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEM 356
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGWCKIRRV 227
G N N L+D+ + + +A +I L + + ++ + T+N I G+CK +
Sbjct: 357 TKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQA 416
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
+ A ++EM G S++++I C+ F + EM ++ SP T +
Sbjct: 417 DNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTL 476
Query: 288 MCALAKAEKFDEALQV 303
+ L K K +AL++
Sbjct: 477 ISGLCKHGKHSKALEL 492
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 99/202 (49%), Gaps = 5/202 (2%)
Query: 107 PESYDMMVDILGRMKVMDKLRDLL---DQMRCEGSIITLNTIAKVMRRFVGAGQWADAVR 163
P++Y + I G M+K+ + + D + G + + T + ++ A + +
Sbjct: 573 PDNYTYSILICGLFN-MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 164 IFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWC 222
FD++ + ++ NT N L+ C+ + A ++ ++K + I+PN+ T+ I G
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 223 KIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVV 282
I RVEEA +EM+ G P V Y+ +I Y KV LL EM +++ PN +
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 283 TYTIIMCALAKAEKFDEALQVI 304
TYT+++ A+ EA +++
Sbjct: 752 TYTVMIGGYARDGNVTEASRLL 773
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 97/199 (48%), Gaps = 18/199 (9%)
Query: 108 ESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDD 167
E++ + +ILGR VMD+ ++ NT+ + G + +A D+
Sbjct: 523 EAFRIQKEILGRGCVMDR--------------VSYNTL---ISGCCGKKKLDEAFMFLDE 565
Query: 168 LQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRR 226
+ GL+ + + ++L+ L VE+A Q + + K++ + P+ +T+++ I G CK R
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 625
Query: 227 VEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTI 286
EE EM +P + Y+ +I+ YC S EL ++M+ + SPN TYT
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685
Query: 287 IMCALAKAEKFDEALQVIE 305
++ ++ + +EA + E
Sbjct: 686 LIKGMSIISRVEEAKLLFE 704
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 101/229 (44%), Gaps = 36/229 (15%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
Y+ ++D ++K ++ D M +G +T +T +++ + GQ +A R+ ++
Sbjct: 368 YNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML 427
Query: 170 TLGLEKNTES-----------------------------------MNLLLDTLCKEEFVE 194
++G N S + L+ LCK
Sbjct: 428 SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHS 487
Query: 195 QARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTII 253
+A +++ + L + + T N +HG C+ +++EA +E+ G GC +SY+T+I
Sbjct: 488 KALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI 547
Query: 254 QCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQ 302
C ++ + + LDEM + P+ TY+I++C L K +EA+Q
Sbjct: 548 SGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ 596
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 99/197 (50%), Gaps = 5/197 (2%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIA--KVMRRFVGAGQWADAVRIFD 166
+Y +M+D + + ++ ++ D+M + + NT+ ++R + +G+ + A+ + +
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKN--VQPNTVVYNHLIRAYCRSGRLSMALELRE 669
Query: 167 DLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIR 225
D++ G+ N+ + L+ + VE+A+ ++ E++ + + PN + I G+ K+
Sbjct: 670 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 729
Query: 226 RVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYT 285
++ + ++EM P I+Y+ +I Y + N ++ LL+EM+ + P+ +TY
Sbjct: 730 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYK 789
Query: 286 IIMCALAKAEKFDEALQ 302
+ K EA +
Sbjct: 790 EFIYGYLKQGGVLEAFK 806
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 83/177 (46%), Gaps = 2/177 (1%)
Query: 128 DLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTL 187
D+ + +G + T ++ V A ++ FD + G+ + ++
Sbjct: 212 DVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAF 270
Query: 188 CKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCV 246
CK VE+A +++ ++++ +APN TFN I G R +EA ++M G P +
Sbjct: 271 CKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTL 330
Query: 247 ISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
I+YS +++ + Y +L EM + PNV+ Y ++ + +A ++A+++
Sbjct: 331 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 387
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 77/145 (53%)
Query: 161 AVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHG 220
A+ +F L G+ + + N+LL +L + ++ + + + + ++P+ + F I+
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINA 269
Query: 221 WCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPN 280
+CK +VEEA +M+ G P V++++T+I + + + ++M + P
Sbjct: 270 FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 329
Query: 281 VVTYTIIMCALAKAEKFDEALQVIE 305
++TY+I++ L +A++ +A V++
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLK 354
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 86/210 (40%), Gaps = 44/210 (20%)
Query: 135 CEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC-----K 189
C+G + + F G+ +AV++F ++ G+ N + N ++D L
Sbjct: 253 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 312
Query: 190 EEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI-- 247
E F+ + + + ++ + P T++I + G + +R+ +A++ ++EM G P VI
Sbjct: 313 EAFMFKEKMV----ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 368
Query: 248 ---------------------------------SYSTIIQCYCNEQNFSKVYELLDEMQA 274
+Y+T+I+ YC LL EM +
Sbjct: 369 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428
Query: 275 QDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+ N ++T ++C L FD AL+ +
Sbjct: 429 IGFNVNQGSFTSVICLLCSHLMFDSALRFV 458
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 90/196 (45%), Gaps = 1/196 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+++ ++D LG D+ ++M G TL T + +++ A + DA + ++
Sbjct: 297 TFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEM 356
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGWCKIRRV 227
G N N L+D+ + + +A +I L + + ++ + T+N I G+CK +
Sbjct: 357 TKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQA 416
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
+ A ++EM G S++++I C+ F + EM ++ SP T +
Sbjct: 417 DNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTL 476
Query: 288 MCALAKAEKFDEALQV 303
+ L K K +AL++
Sbjct: 477 ISGLCKHGKHSKALEL 492
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 133/299 (44%), Gaps = 9/299 (3%)
Query: 4 LYSRKCCCSLFSRLAIASCGARGFRHQEQCQSLMRSVDILTSKVAKGSSEEEII----RS 59
L R SL+S L I + RH + L +S D +K ++ ++ R
Sbjct: 3 LLRRYSGGSLYSILPIRASIESTIRHFNSLEPL-QSSDSTPTKGDYFAAINHVVNIVRRE 61
Query: 60 LCNDQACDAIHL--SPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDIL 117
+ +++ +++ L + + +LR +L F WA + ++ + Y+ + L
Sbjct: 62 IHPERSLNSLRLPVTSEFVFRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSL 121
Query: 118 GRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL-QTLGLEKN 176
K + + +L QM+ I+ T+ ++ ++ G AV +F+ + +TLG ++
Sbjct: 122 ASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQT 181
Query: 177 TESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQ 235
+ N LL LC + A + + ++ + P+ T+ I ++GWC +++EA +
Sbjct: 182 VDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLD 241
Query: 236 EMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKA 294
EM G P +I+ N E++ +M P++ T+ I++ A++K+
Sbjct: 242 EMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKS 300
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 95/247 (38%), Gaps = 36/247 (14%)
Query: 90 ALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVM 149
A+ LF Q + + Y+ ++ L +K+ L+ +M +G T A ++
Sbjct: 165 AVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILV 224
Query: 150 RRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIA 208
+ AG+ +A D++ G +LL++ L ++E A+++ ++ K
Sbjct: 225 NGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFV 284
Query: 209 PNAHTFNIFIH---------------------GWC--------------KIRRVEEAHWT 233
P+ TFNI I G C KI +++EA
Sbjct: 285 PDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRL 344
Query: 234 IQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAK 293
+ G +P Y+ II+ C F + +M+ + PN YT+++ +
Sbjct: 345 LNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGR 404
Query: 294 AEKFDEA 300
KF +A
Sbjct: 405 GGKFVDA 411
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 87/176 (49%), Gaps = 1/176 (0%)
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
+ +++ +G + TL T ++ F G + + R+ +++ GL + +N ++D
Sbjct: 262 VFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKY 321
Query: 189 KEEF-VEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
+ + V+ A I + P+ T+NI I+ CK + E A + E G P +
Sbjct: 322 RHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNL 381
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
SY+ +IQ YC + + +LL +M + C P++VTY I++ L + D+A+ +
Sbjct: 382 SYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNM 437
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 97/191 (50%), Gaps = 3/191 (1%)
Query: 106 SPES--YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVR 163
SP++ Y+M++ L + + L +M + A ++ F+ +G + +A +
Sbjct: 447 SPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARK 506
Query: 164 IFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWC 222
+F G++ + N ++ C+ +++A + ++H+ P+ T++ I G+
Sbjct: 507 VFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYV 566
Query: 223 KIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVV 282
K + + A + M+ C+P V++Y+++I +C + +F E EMQ +D PNVV
Sbjct: 567 KQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVV 626
Query: 283 TYTIIMCALAK 293
TYT ++ +LAK
Sbjct: 627 TYTTLIRSLAK 637
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 98/216 (45%), Gaps = 4/216 (1%)
Query: 86 DWKSALGLFKWASLHSNFQHSPESY--DMMVDILGRMKVMDKLRDLLDQMRCEGSIITLN 143
D + + LF W S + + + +L R ++ +++ D+L +R E +T
Sbjct: 76 DVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHE 135
Query: 144 TIAKVMRRFVGAGQWADAVRIFDDLQTL-GLEKNTESMNLLLDTLCKEEFVEQARQIYLE 202
++ V+ + +G + AV I+D + L + + N LL L K + AR++Y E
Sbjct: 136 ALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDE 195
Query: 203 L-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQN 261
+ + + + ++ I + G C +VE I+ G GC P ++ Y+TII YC +
Sbjct: 196 MCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGD 255
Query: 262 FSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKF 297
Y + E++ + P + T+ ++ K F
Sbjct: 256 IENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDF 291
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 102/254 (40%), Gaps = 47/254 (18%)
Query: 77 NILLRRYKDDWKS--ALGLFKWAS----LHSNFQHSPESYDMMVDILGRMKVMDKLRDLL 130
NIL+ R + K A+G AS + +N ++P ++ + K D LL
Sbjct: 349 NILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAP-----LIQAYCKSKEYDIASKLL 403
Query: 131 DQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKE 190
QM G + T ++ V +G DAV + L G+ + N+L+ LCK
Sbjct: 404 LQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKT 463
Query: 191 EFVEQARQIYLE-LKQHIAPNAHTF----------------------------------- 214
A+ ++ E L ++I P+A+ +
Sbjct: 464 GRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHH 523
Query: 215 NIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQA 274
N I G+C+ ++EA + M P +YSTII Y +Q+ + ++ M+
Sbjct: 524 NAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEK 583
Query: 275 QDCSPNVVTYTIIM 288
C PNVVTYT ++
Sbjct: 584 NKCKPNVVTYTSLI 597
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 88/199 (44%), Gaps = 18/199 (9%)
Query: 118 GRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNT 177
G+++V KL + C +I+ NTI + + G +A +F +L+ G
Sbjct: 219 GKVEVGRKLIEGRWGKGCIPNIVFYNTI---IGGYCKLGDIENAYLVFKELKLKGFMPTL 275
Query: 178 ESMNLLLDTLCKE-EFVEQARQIYLELKQHIAPNAHTFNIFI-----HGWCKIRRVEEAH 231
E+ +++ CKE +FV R + ++ + + N I HG+ K+ E
Sbjct: 276 ETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGY-KVDPAESIG 334
Query: 232 WTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCAL 291
W I C+P V +Y+ +I C E LDE + PN ++Y ++ A
Sbjct: 335 WIIAN----DCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAY 390
Query: 292 AKAEKFDEA----LQVIER 306
K++++D A LQ+ ER
Sbjct: 391 CKSKEYDIASKLLLQMAER 409
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 124/259 (47%), Gaps = 18/259 (6%)
Query: 63 DQACDAIHLSP--NLINILLRRYKDDW--KSALGLFKWA--SLHSNFQHSPESYDMMVDI 116
++ + + +SP NL+ ++ K++ + L F W+ SL S+ H E ++ ++ +
Sbjct: 55 EENLNQVSVSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSL-HDKE-FNYVLRV 112
Query: 117 LGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKN 176
L K ++ LL +R E + T + V V G+ DA+ IF L ++
Sbjct: 113 LAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQD 172
Query: 177 TESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNA-HTFNIFIHGWCKIRRVEEAHWTIQ 235
++ ++ LC V++A + K I+ N + + GW R V+EA IQ
Sbjct: 173 GFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQ 232
Query: 236 EMKGYGCRPCVISYSTIIQCYCNEQNFSK-----VYELLD---EMQAQDCSPNVVTYTII 287
+MK G P + +++++ C C E+N ++ V E L+ EM++ P ++Y I+
Sbjct: 233 DMKSAGITPDLFCFNSLLTCLC-ERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNIL 291
Query: 288 MCALAKAEKFDEALQVIER 306
+ L + + E+ Q++E+
Sbjct: 292 LSCLGRTRRVRESCQILEQ 310
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 8/155 (5%)
Query: 160 DAVRIFDDLQTLGLEKNTESMNLLLDTLCKEE-------FVEQARQIYLELKQH-IAPNA 211
+A R+ D+++ G+ + N LL LC+ V +A I LE++ + I P +
Sbjct: 226 EARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTS 285
Query: 212 HTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDE 271
++NI + + RRV E+ +++MK GC P SY +++ F K +++DE
Sbjct: 286 MSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDE 345
Query: 272 MQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
M + P Y ++ L E+ + ALQ+ E+
Sbjct: 346 MIERGFRPERKFYYDLIGVLCGVERVNFALQLFEK 380
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 104/210 (49%), Gaps = 4/210 (1%)
Query: 95 KWASLHSNFQHSPESYDM--MVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRF 152
+W S+F P++ M M+D GR +D L D+ R E I T + ++R +
Sbjct: 231 EWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIY 290
Query: 153 VGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNA 211
+G + + I+++++ LG++ N N L+D++ + + QA+ IY +L PN
Sbjct: 291 GVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNW 350
Query: 212 HTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDE 271
T+ + + + R ++A +EMK G VI Y+T++ + + + +E+ +
Sbjct: 351 STYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQD 410
Query: 272 MQA-QDCSPNVVTYTIIMCALAKAEKFDEA 300
M+ + C P+ T++ ++ A + + EA
Sbjct: 411 MKNCETCDPDSWTFSSLITVYACSGRVSEA 440
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 81/173 (46%), Gaps = 2/173 (1%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
Y+ ++D +GR K + + + + G +T A ++R + A DA+ I+ +++
Sbjct: 318 YNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMK 377
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK--QHIAPNAHTFNIFIHGWCKIRRV 227
GL N LL +V++A +I+ ++K + P++ TF+ I + RV
Sbjct: 378 EKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRV 437
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPN 280
EA + +M+ G P + +++IQCY + V D++ +P+
Sbjct: 438 SEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 104/218 (47%), Gaps = 16/218 (7%)
Query: 90 ALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVM 149
+L ++ + SL S F +S Y V++ +M ++ C+ ++IT N I V
Sbjct: 205 SLDVYSYTSLISAFANSGR-YREAVNVFKKM----------EEDGCKPTLITYNVILNVF 253
Query: 150 RRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQ-ARQIYLELKQ-HI 207
+ W + + +++ G+ + + N L+ T CK + Q A Q++ E+K
Sbjct: 254 GKM--GTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGSLHQEAAQVFEEMKAAGF 310
Query: 208 APNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYE 267
+ + T+N + + K R +EA + EM G P +++Y+++I Y + + E
Sbjct: 311 SYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAME 370
Query: 268 LLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
L ++M + P+V TYT ++ +A K + A+ + E
Sbjct: 371 LKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFE 408
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 103/225 (45%), Gaps = 43/225 (19%)
Query: 109 SYDMMVDILGRMKVM-DKLRDLLDQMRCEG---SIITLNTIAKVMRRFVGAGQWADAVRI 164
+Y++++++ G+M +K+ L+++M+ +G T NT+ +R +A ++
Sbjct: 245 TYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKR---GSLHQEAAQV 301
Query: 165 FDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY------------------------ 200
F++++ G + + N LLD K ++A ++
Sbjct: 302 FEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYAR 361
Query: 201 -------LELKQHIA-----PNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVIS 248
+ELK +A P+ T+ + G+ + +VE A +EM+ GC+P + +
Sbjct: 362 DGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICT 421
Query: 249 YSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAK 293
++ I+ Y N F+++ ++ DE+ SP++VT+ ++ +
Sbjct: 422 FNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQ 466
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 124/306 (40%), Gaps = 42/306 (13%)
Query: 18 AIASCGARGFRHQEQCQSL--MRSVDILTSKV---------AKGSSEEEIIRSLCNDQAC 66
+ +C RG HQE Q M++ KV K +E ++ L N+
Sbjct: 284 TLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVL-NEMVL 342
Query: 67 DAIHLSPNLINILLRRYKDDW---------------KSALGLFKWASLHSNFQHSPESYD 111
+ S N L+ Y D + +F + +L S F+ + +
Sbjct: 343 NGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGK--- 399
Query: 112 MMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTL 171
+ M + +++R+ C+ +I T N K+ + G++ + ++IFD++
Sbjct: 400 ----VESAMSIFEEMRN----AGCKPNICTFNAFIKM---YGNRGKFTEMMKIFDEINVC 448
Query: 172 GLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEA 230
GL + + N LL + + ++ E+K+ P TFN I + + E+A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 231 HWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCA 290
+ M G P + +Y+T++ + + ++L EM+ C PN +TY ++ A
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Query: 291 LAKAEK 296
A ++
Sbjct: 569 YANGKE 574
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 4/168 (2%)
Query: 139 IITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQ 198
I TLN++ + R A A + D ++ G + + N L+ + ++ +
Sbjct: 629 ITTLNSMVSIYGR---RQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEE 685
Query: 199 IYLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYC 257
I E L + I P+ ++N I+ +C+ R+ +A EM+ G P VI+Y+T I Y
Sbjct: 686 ILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYA 745
Query: 258 NEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+ F + ++ M C PN TY I+ K + DEA +E
Sbjct: 746 ADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVE 793
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 97/205 (47%), Gaps = 1/205 (0%)
Query: 101 SNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWAD 160
+ F S +Y+ ++ R ++D+ +L +QM +G+ + T ++ F AG+
Sbjct: 343 NGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVES 402
Query: 161 AVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIH 219
A+ IF++++ G + N + N + + +I+ E+ ++P+ T+N +
Sbjct: 403 AMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLA 462
Query: 220 GWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSP 279
+ + E +EMK G P +++T+I Y +F + + M +P
Sbjct: 463 VFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTP 522
Query: 280 NVVTYTIIMCALAKAEKFDEALQVI 304
++ TY ++ ALA+ ++++ +V+
Sbjct: 523 DLSTYNTVLAALARGGMWEQSEKVL 547
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 128/311 (41%), Gaps = 12/311 (3%)
Query: 4 LYSRKCCCSLFSRLAIASCGARGFRHQEQ--CQSLMRSVDILTSKVAKGSSEEEIIRSLC 61
+YS S F+ F+ E+ C+ + + +++ + K + I SL
Sbjct: 208 VYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLV 267
Query: 62 NDQACDAIHLSPNLINILLR--RYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGR 119
D I N L+ + + A +F+ + F + +Y+ ++D+ G+
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKA-AGFSYDKVTYNALLDVYGK 326
Query: 120 MKVMDKLRDLLDQMRCEG---SIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKN 176
+ +L++M G SI+T N++ R G +A+ + + + G + +
Sbjct: 327 SHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYAR---DGMLDEAMELKNQMAEKGTKPD 383
Query: 177 TESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQ 235
+ LL + VE A I+ E++ PN TFN FI + + E
Sbjct: 384 VFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFD 443
Query: 236 EMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAE 295
E+ G P +++++T++ + S+V + EM+ P T+ ++ A ++
Sbjct: 444 EINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 503
Query: 296 KFDEALQVIER 306
F++A+ V R
Sbjct: 504 SFEQAMTVYRR 514
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 80/184 (43%), Gaps = 4/184 (2%)
Query: 118 GRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNT 177
G+ M K+ D ++ I+T NT+ V F G ++ +F +++ G
Sbjct: 433 GKFTEMMKIFDEINVCGLSPDIVTWNTLLAV---FGQNGMDSEVSGVFKEMKRAGFVPER 489
Query: 178 ESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQE 236
E+ N L+ + EQA +Y L + P+ T+N + + E++ + E
Sbjct: 490 ETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAE 549
Query: 237 MKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEK 296
M+ C+P ++Y +++ Y N + ++ L +E+ + P V ++ +K +
Sbjct: 550 MEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDL 609
Query: 297 FDEA 300
EA
Sbjct: 610 LPEA 613
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/274 (18%), Positives = 115/274 (41%), Gaps = 41/274 (14%)
Query: 71 LSPNLI--NILLRRYKDDW--KSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKL 126
LSP+++ N LL + + G+FK + F E+++ ++ R ++
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMK-RAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 127 RDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQT---------------- 170
+ +M G L+T V+ G W + ++ +++
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Query: 171 ------LGLEKN---------TESMNLLLDTLC----KEEFVEQARQIYLELKQH-IAPN 210
+GL + E +LL TL K + + +A + + ELK+ +P+
Sbjct: 569 YANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPD 628
Query: 211 AHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLD 270
T N + + + + V +A+ + MK G P + +Y++++ + +F K E+L
Sbjct: 629 ITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILR 688
Query: 271 EMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
E+ A+ P++++Y ++ A + + +A ++
Sbjct: 689 EILAKGIKPDIISYNTVIYAYCRNTRMRDASRIF 722
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 77/171 (45%), Gaps = 38/171 (22%)
Query: 106 SPE--SYDMMVDILGRMKVMDKLRDLLDQMRCEG---SIITLNTI-------------AK 147
SP+ + + MV I GR +++ K +LD M+ G S+ T N++ +
Sbjct: 626 SPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEE 685
Query: 148 VMRRFVGAG-------------------QWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
++R + G + DA RIF +++ G+ + + N + +
Sbjct: 686 ILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYA 745
Query: 189 KEEFVEQARQIYLELKQHI-APNAHTFNIFIHGWCKIRRVEEAHWTIQEMK 238
+ E+A + + +H PN +T+N + G+CK+ R +EA +++++
Sbjct: 746 ADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 5/157 (3%)
Query: 143 NTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE 202
N + ++M+ W + I D G N N+L++ CKE + A++++ E
Sbjct: 210 NLLDRMMKLNPTGTIWGFYMEILD----AGFPLNVYVFNILMNKFCKEGNISDAQKVFDE 265
Query: 203 L-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQN 261
+ K+ + P +FN I+G+CK+ ++E +M+ RP V +YS +I C E
Sbjct: 266 ITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENK 325
Query: 262 FSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFD 298
+ L DEM + PN V +T ++ ++ + D
Sbjct: 326 MDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEID 362
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 117/279 (41%), Gaps = 37/279 (13%)
Query: 26 GFRHQEQCQSLMRSVDILTSKVAKGSSEEEIIRSLCNDQACDAIHLSPNLINILLRRYKD 85
GFR + Q + D+ T +I +LC + D H L + + +R
Sbjct: 294 GFRLKHQMEKSRTRPDVFTYSA--------LINALCKENKMDGAH---GLFDEMCKR--- 339
Query: 86 DWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEG---SIITL 142
GL + + H R +D +++ +M +G I+
Sbjct: 340 ------GLIPNDVIFTTLIHGHS----------RNGEIDLMKESYQKMLSKGLQPDIVLY 383
Query: 143 NTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE 202
NT+ + F G A I D + GL + + L+D C+ VE A +I E
Sbjct: 384 NTL---VNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKE 440
Query: 203 LKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQN 261
+ Q+ I + F+ + G CK RV +A ++EM G +P ++Y+ ++ +C + +
Sbjct: 441 MDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGD 500
Query: 262 FSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
++LL EMQ+ P+VVTY +++ L K + A
Sbjct: 501 AQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA 539
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/231 (18%), Positives = 106/231 (45%), Gaps = 7/231 (3%)
Query: 77 NILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDIL---GRMKVMDKLRDLLDQM 133
N+L R K + + F L + F + ++++++ G + K+ D + +
Sbjct: 210 NLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKR 269
Query: 134 RCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFV 193
+ ++++ NT+ + + G + R+ ++ + + + L++ LCKE +
Sbjct: 270 SLQPTVVSFNTL---INGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKM 326
Query: 194 EQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTI 252
+ A ++ E+ K+ + PN F IHG + ++ + Q+M G +P ++ Y+T+
Sbjct: 327 DGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTL 386
Query: 253 IQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
+ +C + ++D M + P+ +TYT ++ + + AL++
Sbjct: 387 VNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEI 437
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 98/231 (42%), Gaps = 18/231 (7%)
Query: 88 KSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLD-----QMRCEGSIITL 142
+S FK+ S F+ + E+Y ++ L ++ + + L++ + + S + +
Sbjct: 99 RSIFAFFKFISSQPGFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFI 158
Query: 143 NTIA------------KVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKE 190
+ + +M + G DA++ F + + LLD + K
Sbjct: 159 SLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKL 218
Query: 191 EFVEQARQIYLELKQHIAP-NAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISY 249
Y+E+ P N + FNI ++ +CK + +A E+ +P V+S+
Sbjct: 219 NPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSF 278
Query: 250 STIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
+T+I YC N + + L +M+ P+V TY+ ++ AL K K D A
Sbjct: 279 NTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGA 329
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 74/159 (46%), Gaps = 1/159 (0%)
Query: 148 VMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQH 206
+M +F G +DA ++FD++ L+ S N L++ CK +++ ++ ++ K
Sbjct: 246 LMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSR 305
Query: 207 IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVY 266
P+ T++ I+ CK +++ AH EM G P + ++T+I + +
Sbjct: 306 TRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMK 365
Query: 267 ELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
E +M ++ P++V Y ++ K A +++
Sbjct: 366 ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVD 404
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 60/113 (53%), Gaps = 3/113 (2%)
Query: 156 GQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ--HIAPNAHT 213
G+ DA R ++ G++ + + +++D CK+ + ++ E++ H+ P+ T
Sbjct: 464 GRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV-PSVVT 522
Query: 214 FNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVY 266
+N+ ++G CK+ +++ A + M G P I+Y+T+++ + N SK Y
Sbjct: 523 YNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRY 575
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 150/358 (41%), Gaps = 81/358 (22%)
Query: 24 ARGFRHQEQCQSLMRSVDILTSKVAKGSSEEEIIRSLCNDQAC--DAIHLSPNLINILLR 81
A+G R + S SV ++ + + E+ +CN+ C D I S LI+ +
Sbjct: 188 AKG-RKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSA-LISSYEK 245
Query: 82 RYKDDWKSALGLFKWASLHSN-FQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSII 140
++D SA+ LF + N Q + + Y ++ I ++ ++K DL ++M+ G
Sbjct: 246 LGRND--SAIRLFD--EMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSP 301
Query: 141 TLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY 200
T+ T ++++ AG+ +A + D+ GL + +N L++ L K VE+ ++
Sbjct: 302 TVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVF 361
Query: 201 LEL----------------------KQHIA---------------PNAHTFNIFIHGWCK 223
E+ K H++ P+ T++I I G+CK
Sbjct: 362 SEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCK 421
Query: 224 IRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCY--------CNE------QNF----SKV 265
RVE+A ++EM G PC +Y ++I NE +NF S+V
Sbjct: 422 TNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRV 481
Query: 266 Y-----------------ELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
Y +L +EM+ Q P+V Y +M + KA +EA ++ +
Sbjct: 482 YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRK 539
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 100/211 (47%), Gaps = 3/211 (1%)
Query: 93 LFKWASLHSNFQHSPESYDMMVDILGRMKVMDKL-RDLLDQMRCEGSIITLNTIAKVMRR 151
FKWA NFQH +Y ++ L ++ ++ R + + +R ++ ++++++
Sbjct: 112 FFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKA 171
Query: 152 FVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL--KQHIAP 209
A + A+ +F + + + + N ++ L +E E+ ++Y E+ + P
Sbjct: 172 LGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFP 231
Query: 210 NAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELL 269
+ T++ I + K+ R + A EMK +P Y+T++ Y K +L
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLF 291
Query: 270 DEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
+EM+ CSP V TYT ++ L KA + DEA
Sbjct: 292 EEMKRAGCSPTVYTYTELIKGLGKAGRVDEA 322
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/195 (17%), Positives = 98/195 (50%), Gaps = 1/195 (0%)
Query: 102 NFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADA 161
F P +Y +++ LG+ K + +L +++ ++ A +++ F G+ ++A
Sbjct: 439 GFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEA 498
Query: 162 VRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHG 220
V +F++++ G + + N L+ + K + +A + +++++ + ++ NI ++G
Sbjct: 499 VDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNG 558
Query: 221 WCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPN 280
+ + A + +K G +P ++Y+T++ C+ + F + ++ EM+ + +
Sbjct: 559 FARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYD 618
Query: 281 VVTYTIIMCALAKAE 295
+TY+ I+ A+ +
Sbjct: 619 AITYSSILDAVGNVD 633
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 99/207 (47%), Gaps = 5/207 (2%)
Query: 104 QHSPE---SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIIT-LNTIAKVMRRFVGAGQWA 159
+HSP +Y+ ++ L + K + + + +D+MR + + L + ++ +
Sbjct: 188 KHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLR 247
Query: 160 DAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFI 218
+A+ + L G + + N ++ C +A +Y ++K+ + P+ T+N I
Sbjct: 248 EAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLI 307
Query: 219 HGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCS 278
G K RVEEA ++ M G P +Y++++ C + LL+EM+A+ C+
Sbjct: 308 FGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCA 367
Query: 279 PNVVTYTIIMCALAKAEKFDEALQVIE 305
PN TY ++ L KA D+ +++ E
Sbjct: 368 PNDCTYNTLLHGLCKARLMDKGMELYE 394
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 74/146 (50%), Gaps = 2/146 (1%)
Query: 163 RIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGW 221
R+ + + GLE + + ++ + +LC+ V++A+ + EL ++H P+ +T+N +
Sbjct: 145 RVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHL 204
Query: 222 CKIRRVEEAHWTIQEMK-GYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPN 280
CK + + + + EM+ + +P ++S++ +I CN +N + L+ ++ P+
Sbjct: 205 CKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPD 264
Query: 281 VVTYTIIMCALAKAEKFDEALQVIER 306
Y IM K EA+ V ++
Sbjct: 265 CFLYNTIMKGFCTLSKGSEAVGVYKK 290
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Query: 148 VMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE--LKQ 205
+M+ F + ++AV ++ ++ G+E + + N L+ L K VE+AR +YL+ +
Sbjct: 271 IMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEAR-MYLKTMVDA 329
Query: 206 HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKV 265
P+ T+ ++G C+ A ++EM+ GC P +Y+T++ C + K
Sbjct: 330 GYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKG 389
Query: 266 YELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
EL + M++ Y ++ +L K+ K EA +V +
Sbjct: 390 MELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFD 429
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 101/202 (50%), Gaps = 3/202 (1%)
Query: 106 SPE--SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVR 163
SP+ +++ ++D+ R K +D+ LL ++ G + T ++ F A
Sbjct: 429 SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD 488
Query: 164 IFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWC 222
+F ++ + G+ +T + N+LL C+ E +E+A +++ ++ I + +NI IHG C
Sbjct: 489 LFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC 548
Query: 223 KIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVV 282
K +V+EA + +G P V +Y+ +I +C + S L +M+ P+
Sbjct: 549 KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNS 608
Query: 283 TYTIIMCALAKAEKFDEALQVI 304
TY ++ KA + D+++++I
Sbjct: 609 TYNTLIRGCLKAGEIDKSIELI 630
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 112/243 (46%), Gaps = 14/243 (5%)
Query: 70 HLSPNLI---NILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVD---ILGRMKVM 123
H+ P+++ I+ R KD S L + +Y+ M+D GR
Sbjct: 291 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 350
Query: 124 DKL-RDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNL 182
+L RD++++ ++T N + V G+ +A ++ D++ + +T + N
Sbjct: 351 QRLLRDMIER-EINPDVLTFNALISAS---VKEGKLFEAEKLCDEMLHRCIFPDTVTYNS 406
Query: 183 LLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGC 242
++ CK + A+ ++ + +P+ TFN I +C+ +RV+E ++E+ G
Sbjct: 407 MIYGFCKHNRFDDAKHMFDLMA---SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 243 RPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQ 302
+Y+T+I +C N + +L EM + P+ +T I++ + EK +EAL+
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 303 VIE 305
+ E
Sbjct: 524 LFE 526
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 144 TIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL 203
T ++ F ++ DA +FD L + + N ++D C+ + V++ Q+ E+
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFD----LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREI 458
Query: 204 -KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNF 262
++ + N T+N IHG+C++ + A QEM +G P I+ + ++ +C +
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Query: 263 SKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
+ EL + +Q + V Y II+ + K K DEA
Sbjct: 519 EEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA 556
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 95/198 (47%), Gaps = 4/198 (2%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+ ++ + ++ +DL +M G T ++ F + +A+ +F+ +
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 528
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRV 227
Q ++ +T + N+++ +CK V++A ++ L H + P+ T+N+ I G+C +
Sbjct: 529 QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAI 588
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTI- 286
+A+ +MK G P +Y+T+I+ K EL+ EM++ S + T +
Sbjct: 589 SDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMA 648
Query: 287 --IMCALAKAEKFDEALQ 302
I+C ++ E + L+
Sbjct: 649 EEIICRVSDEEIIENYLR 666
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 16/197 (8%)
Query: 113 MVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLG 172
++ + RM D L +M + + + +++ F + + ++ F L LG
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 173 LEKNTESMNLLLDTLCKEEFVEQARQIY--------LE--------LKQHIAPNAHTFNI 216
+ + + N LL LC E+ + +A ++ LE ++ + P TFN
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 217 FIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQD 276
I+G C RV EA + +M G G V++Y TI+ C + LL +M+
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 277 CSPNVVTYTIIMCALAK 293
P+VV Y+ I+ L K
Sbjct: 292 IKPDVVIYSAIIDRLCK 308
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 1/148 (0%)
Query: 158 WADAVRIFDDLQTLGLEKNTESMNLLLDTLCKE-EFVEQARQIYLELKQHIAPNAHTFNI 216
+ +AV +FD + +GL + N L++ LC E +E A + + + + + T+
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 217 FIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQD 276
++G CK+ + A + +M+ +P V+ YS II C + + S L EM +
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 277 CSPNVVTYTIIMCALAKAEKFDEALQVI 304
+PNV TY ++ ++ +A +++
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLL 354
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 84/203 (41%), Gaps = 16/203 (7%)
Query: 120 MKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTES 179
K +D D D M T KV+ FV + A+ ++ ++ + N S
Sbjct: 84 FKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYS 143
Query: 180 MNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEA----HWTI 234
N+L+ C + + + +L K P+ TFN +HG C R+ EA + +
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 235 Q-----------EMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVT 283
+ +M G P VI+++T+I C E + L+++M + +VVT
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 284 YTIIMCALAKAEKFDEALQVIER 306
Y I+ + K AL ++ +
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSK 286
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 105/223 (47%), Gaps = 7/223 (3%)
Query: 87 WKSALGLFKWA-SLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTI 145
W+ F ++ + H +F H+ + + M+ I+G + MD +L ++ G ++ T
Sbjct: 91 WRPVHRFFLYSQTHHPDFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRG-LVNDKTF 149
Query: 146 AKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ 205
V++ A + V F + G N E+MN ++TLCKE+ VE+A+ ++++LK+
Sbjct: 150 RIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKE 209
Query: 206 HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNF--- 262
I P+ T+ I G+C + + EA M G + + I++ + F
Sbjct: 210 FIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEA 269
Query: 263 SKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
SKV+ ++ + D Y +++ L K + D A +V +
Sbjct: 270 SKVFYVMVSKRGGDLDGGF--YRVMIDWLCKNGRIDMARKVFD 310
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 101/202 (50%), Gaps = 3/202 (1%)
Query: 106 SPE--SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVR 163
SP+ +++ ++D+ R K +D+ LL ++ G + T ++ F A
Sbjct: 429 SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD 488
Query: 164 IFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWC 222
+F ++ + G+ +T + N+LL C+ E +E+A +++ ++ I + +NI IHG C
Sbjct: 489 LFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC 548
Query: 223 KIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVV 282
K +V+EA + +G P V +Y+ +I +C + S L +M+ P+
Sbjct: 549 KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNS 608
Query: 283 TYTIIMCALAKAEKFDEALQVI 304
TY ++ KA + D+++++I
Sbjct: 609 TYNTLIRGCLKAGEIDKSIELI 630
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 144 TIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL 203
T ++ F ++ DA +FD L + + N ++D C+ + V++ Q+ E+
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFD----LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREI 458
Query: 204 -KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNF 262
++ + N T+N IHG+C++ + A QEM +G P I+ + ++ +C +
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Query: 263 SKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
+ EL + +Q + V Y II+ + K K DEA
Sbjct: 519 EEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA 556
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 112/243 (46%), Gaps = 14/243 (5%)
Query: 70 HLSPNLI---NILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVD---ILGRMKVM 123
H+ P+++ I+ R KD S L + +Y+ M+D GR
Sbjct: 291 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 350
Query: 124 DKL-RDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNL 182
+L RD++++ ++T N + V G+ +A ++ D++ + +T + N
Sbjct: 351 QRLLRDMIER-EINPDVLTFNALISAS---VKEGKLFEAEKLCDEMLHRCIFPDTVTYNS 406
Query: 183 LLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGC 242
++ CK + A+ ++ + +P+ TFN I +C+ +RV+E ++E+ G
Sbjct: 407 MIYGFCKHNRFDDAKHMFDLMA---SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 243 RPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQ 302
+Y+T+I +C N + +L EM + P+ +T I++ + EK +EAL+
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 303 VIE 305
+ E
Sbjct: 524 LFE 526
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 89/183 (48%), Gaps = 3/183 (1%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+ ++ + ++ +DL +M G T ++ F + +A+ +F+ +
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 528
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRV 227
Q ++ +T + N+++ +CK V++A ++ L H + P+ T+N+ I G+C +
Sbjct: 529 QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAI 588
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
+A+ +MK G P +Y+T+I+ K EL+ EM++ S + +TI
Sbjct: 589 SDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD--AFTIK 646
Query: 288 MCA 290
M A
Sbjct: 647 MVA 649
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 16/197 (8%)
Query: 113 MVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLG 172
++ + RM D L +M + + + +++ F + + ++ F L LG
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 173 LEKNTESMNLLLDTLCKEEFVEQARQIY--------LE--------LKQHIAPNAHTFNI 216
+ + + N LL LC E+ + +A ++ LE ++ + P TFN
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 217 FIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQD 276
I+G C RV EA + +M G G V++Y TI+ C + LL +M+
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 277 CSPNVVTYTIIMCALAK 293
P+VV Y+ I+ L K
Sbjct: 292 IKPDVVIYSAIIDRLCK 308
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 158 WADAVRIFDDLQTLGLEKNTESMNLLLDTLCKE-EFVEQARQIYLELKQHIAPNAHTFNI 216
+ +AV +FD + +GL + N L++ LC E +E A + + + + + T+
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 217 FIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQD 276
++G CK+ + A + +M+ +P V+ YS II C + + S L EM +
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 277 CSPNVVTY 284
+PNV TY
Sbjct: 327 IAPNVFTY 334
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 84/203 (41%), Gaps = 16/203 (7%)
Query: 120 MKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTES 179
K +D D D M T KV+ FV + A+ ++ ++ + N S
Sbjct: 84 FKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYS 143
Query: 180 MNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEA----HWTI 234
N+L+ C + + + +L K P+ TFN +HG C R+ EA + +
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 235 Q-----------EMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVT 283
+ +M G P VI+++T+I C E + L+++M + +VVT
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 284 YTIIMCALAKAEKFDEALQVIER 306
Y I+ + K AL ++ +
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSK 286
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 104/211 (49%), Gaps = 13/211 (6%)
Query: 104 QHSPESYDMMVD---ILGRMKVMDK----LRDLLDQMRCEGSIITLNTIAKVMRRFVGAG 156
Q P+S V + GR ++D+ R+L +Q ++ +LN + + + A
Sbjct: 105 QPDPKSESFAVRAIILYGRANMLDRSIQTFRNL-EQYEIPRTVKSLNAL---LFACLMAK 160
Query: 157 QWADAVRIFDDLQTL-GLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTF 214
+ +A R++ ++ + G+E + E+ N ++ LC+ + I E+++ I P A +F
Sbjct: 161 DYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASF 220
Query: 215 NIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQA 274
+ I G+ K + +E ++ M +G V +Y+ +IQC C + ++ L+D + +
Sbjct: 221 GLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMS 280
Query: 275 QDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
PN VTY++++ E DEA+ + E
Sbjct: 281 CRMRPNSVTYSLLIHGFCSEENLDEAMNLFE 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 94/220 (42%), Gaps = 1/220 (0%)
Query: 86 DWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTI 145
D+K A ++ + E+Y+ M+ +L ++ +M + T +
Sbjct: 161 DYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASF 220
Query: 146 AKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ 205
++ F ++ + ++ + G+ + N+++ LCK + +A+ + +
Sbjct: 221 GLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMS 280
Query: 206 -HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSK 264
+ PN+ T+++ IHG+C ++EA + M G +P Y T+I C C +F
Sbjct: 281 CRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFET 340
Query: 265 VYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
L E ++ P+ ++ LA K DEA ++I
Sbjct: 341 ALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELI 380
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 114/250 (45%), Gaps = 16/250 (6%)
Query: 70 HLSPNLIN---ILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVD--ILG-RMKVM 123
+L P N ++ R + D AL +F+W + ++H+ E+Y M+ I G R +
Sbjct: 68 NLKPGFTNSDVVIALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNFV 127
Query: 124 DKLRDLLDQMRCEGSIITLNTIAKV--MRRFV---GAGQWADAVRIFD---DLQTLGLEK 175
+ L + + CE S+ N I + R+F+ + +R D DL+T L
Sbjct: 128 ETLIEEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLL 187
Query: 176 NTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTI 234
++ +C ++ R + ++K + + P+ N+ I + K V+EA
Sbjct: 188 SSLLKRFNKLNVCYV-YLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVF 246
Query: 235 QEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKA 294
+EM YG P +YS +++ C + + EMQ + PN Y +++C+L+
Sbjct: 247 KEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSME 306
Query: 295 EKFDEALQVI 304
+ DEA++V+
Sbjct: 307 RRLDEAVEVV 316
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 75/152 (49%), Gaps = 1/152 (0%)
Query: 126 LRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLD 185
+R L QM+ G I + +++ + + +A+R+F ++ G E N + + L+
Sbjct: 207 VRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVK 266
Query: 186 TLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRP 244
+C++ V Q Y E++ + + PN + + I RR++EA + +M P
Sbjct: 267 GVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSP 326
Query: 245 CVISYSTIIQCYCNEQNFSKVYELLDEMQAQD 276
+++Y+T++ C S+ E+++E + +D
Sbjct: 327 DMLTYNTVLTELCRGGRGSEALEMVEEWKKRD 358
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 82/159 (51%), Gaps = 1/159 (0%)
Query: 148 VMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-H 206
+M + GQ DAVR+ D++ +G+ NT N L++ CK + +A QI+ +
Sbjct: 337 LMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWS 396
Query: 207 IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVY 266
+ P+ HT+N + G+C+ V+EA +M P V++Y+ +++ Y F V
Sbjct: 397 LKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVL 456
Query: 267 ELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
L M + + + ++ + ++ AL K F+EA+++ E
Sbjct: 457 SLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWE 495
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 78/146 (53%), Gaps = 1/146 (0%)
Query: 156 GQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTF 214
G + +A+++++++ GL +T ++N+++ LCK E V +A++I + P T+
Sbjct: 485 GDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTY 544
Query: 215 NIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQA 274
HG+ K+ ++EA + M+ G P + Y+T+I ++ +KV +L+ E++A
Sbjct: 545 QALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRA 604
Query: 275 QDCSPNVVTYTIIMCALAKAEKFDEA 300
+ +P V TY ++ D+A
Sbjct: 605 RGLTPTVATYGALITGWCNIGMIDKA 630
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
Query: 173 LEKNTESMNLLLDTLCKEEFVEQARQIYLEL--KQHIAPNAHTFNIFIHGWCKIRRVEEA 230
L N N+ + LCK +E AR+++ +L P+ +T+ I IHG + +A
Sbjct: 715 LVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKA 774
Query: 231 HWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCA 290
EM G P +++Y+ +I+ C N + LL ++ + +PN +TY ++
Sbjct: 775 FTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDG 834
Query: 291 LAKAEKFDEALQVIER 306
L K+ EA+++ E+
Sbjct: 835 LVKSGNVAEAMRLKEK 850
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 90/196 (45%), Gaps = 8/196 (4%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
Y M+ D+ G +V+ L+ + +++T ++ K + G +A +F+ L
Sbjct: 270 GYAMIGDVEGMTRVLR----LMSERGVSRNVVTYTSLIK---GYCKKGLMEEAEHVFELL 322
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRV 227
+ L + +L+D C+ + A +++ + + + N N I+G+CK ++
Sbjct: 323 KEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQL 382
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
EA M + +P +Y+T++ YC + +L D+M ++ P V+TY I+
Sbjct: 383 VEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNIL 442
Query: 288 MCALAKAEKFDEALQV 303
+ ++ F + L +
Sbjct: 443 LKGYSRIGAFHDVLSL 458
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 116/258 (44%), Gaps = 22/258 (8%)
Query: 68 AIHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLR 127
++ S L+N +LRR + + ++ L +F AS F+ ++Y MV IL R + + +
Sbjct: 65 SLDFSDELLNSILRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTK 124
Query: 128 DLLDQMRC--EGSIITLNTIAKVMRRF--------------VGAGQWADAVRIFDDLQTL 171
L ++ + + +V + F G +A+ +FD++
Sbjct: 125 SYLCELVALNHSGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNY 184
Query: 172 GLEKNTESMNLLLDTLCK--EEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVE 228
G + S N LL L + E FV A +Y ++ ++P+ T +I ++ +C+ V+
Sbjct: 185 GRIPSLLSCNSLLSNLVRKGENFV--ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVD 242
Query: 229 EAHWTIQEMK-GYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
+A +E + G V++Y+++I Y + + +L M + S NVVTYT +
Sbjct: 243 KAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSL 302
Query: 288 MCALAKAEKFDEALQVIE 305
+ K +EA V E
Sbjct: 303 IKGYCKKGLMEEAEHVFE 320
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/209 (19%), Positives = 92/209 (44%), Gaps = 10/209 (4%)
Query: 102 NFQHSPESY--DMMVDILGRMKVMDKL----RDLLDQMRCEGSIITLNTIAKVMRRFVGA 155
+F+ SP+ + ++V+ R +DK ++ + E +++T N++ + +
Sbjct: 218 SFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSL---INGYAMI 274
Query: 156 GQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTF 214
G R+ + G+ +N + L+ CK+ +E+A ++ LK+ + + H +
Sbjct: 275 GDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMY 334
Query: 215 NIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQA 274
+ + G+C+ ++ +A M G R +++I YC + ++ M
Sbjct: 335 GVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMND 394
Query: 275 QDCSPNVVTYTIIMCALAKAEKFDEALQV 303
P+ TY ++ +A DEAL++
Sbjct: 395 WSLKPDHHTYNTLVDGYCRAGYVDEALKL 423
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 101/231 (43%), Gaps = 33/231 (14%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
++++M+++L + + K + L M G T+ T +++ F G+ A I ++
Sbjct: 227 TFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEM 286
Query: 169 QTLGLEKNTESMNLLLDTLCKE----EFVEQARQIYL----------------------- 201
++ G + + ++ N +L +C E E + + ++I L
Sbjct: 287 KSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMA 346
Query: 202 ------ELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQC 255
+KQ + P +T+N IHG ++E A I+E++ G ++Y+ +I
Sbjct: 347 FAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILING 406
Query: 256 YCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
YC + K + L DEM P TYT ++ L + K EA ++ E+
Sbjct: 407 YCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 88/177 (49%), Gaps = 1/177 (0%)
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC 188
L D+M +G T T ++ + +A +F+ + G++ + MN L+D C
Sbjct: 419 LHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHC 478
Query: 189 KEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVI 247
+++A + E+ I P+ T+N + G C + EEA + EMK G +P I
Sbjct: 479 AIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHI 538
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
SY+T+I Y + + + + DEM + +P ++TY ++ L+K ++ + A +++
Sbjct: 539 SYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELL 595
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 85/175 (48%), Gaps = 1/175 (0%)
Query: 131 DQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKE 190
D+M +G + T T ++ + A + +++ G+ ++ + N+L++ C+
Sbjct: 351 DEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQH 410
Query: 191 EFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISY 249
++A ++ E+ I P T+ I+ C+ + EA +++ G G +P ++
Sbjct: 411 GDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMM 470
Query: 250 STIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+T++ +C N + + LL EM +P+ VTY +M L KF+EA +++
Sbjct: 471 NTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELM 525
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 92/181 (50%), Gaps = 6/181 (3%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
+D++V +++++D+ + M+ +G T ++ + +A + D+
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ--HIAPNAHTFNIFIHGWCKIRRV 227
+ ++ N + N++++ LCKE +++A+ +L + + I P T+N + G+ R+
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKG-FLGIMEVFGIKPTIVTYNTLVQGFSLRGRI 276
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
E A I EMK G +P + +Y+ I+ CNE + E+L EM+ P+ V+Y I+
Sbjct: 277 EGARLIISEMKSKGFQPDMQTYNPILSWMCNE---GRASEVLREMKEIGLVPDSVSYNIL 333
Query: 288 M 288
+
Sbjct: 334 I 334
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 102/227 (44%), Gaps = 6/227 (2%)
Query: 77 NILLRRY--KDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMR 134
NIL+ Y D K A L + Q + +Y ++ +L R + +L +++
Sbjct: 401 NILINGYCQHGDAKKAFALHD-EMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVV 459
Query: 135 CEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVE 194
+G L + +M G A + ++ + + + + N L+ LC E E
Sbjct: 460 GKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFE 519
Query: 195 QARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTII 253
+AR++ E+K+ I P+ ++N I G+ K + A EM G P +++Y+ ++
Sbjct: 520 EARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALL 579
Query: 254 QCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAK--AEKFD 298
+ Q ELL EM+++ PN ++ ++ A++ A+K D
Sbjct: 580 KGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLDAKKSD 626
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Query: 160 DAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFI 218
+A+ F ++ G TE+ N +L L + +E A Y ++ + I N +TFNI I
Sbjct: 173 EAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMI 232
Query: 219 HGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCS 278
+ CK ++++A + M+ +G +P +++Y+T++Q + ++ EM+++
Sbjct: 233 NVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQ 292
Query: 279 PNVVTYTIIMCALAKAEKFDEALQ 302
P++ TY I+ + + E L+
Sbjct: 293 PDMQTYNPILSWMCNEGRASEVLR 316
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 96/199 (48%), Gaps = 7/199 (3%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMR---CEGSIITLNTIAKVMRRFVGAGQWAD-AVRIF 165
Y+ M+ + R K ++L+D MR C +I+ NT+ + R G + AV +
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTL--INARLKSGGLTPNLAVELL 285
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKI 224
D ++ GL + + N LL ++ ++ A +++ +++ H P+ T+N I + +
Sbjct: 286 DMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRC 345
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
EA E++ G P ++Y++++ + E+N KV E+ +MQ + +TY
Sbjct: 346 GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTY 405
Query: 285 TIIMCALAKAEKFDEALQV 303
I+ K + D ALQ+
Sbjct: 406 NTIIHMYGKQGQLDLALQL 424
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 8/206 (3%)
Query: 100 HSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQM---RCEGSIITLNTIAKVMRRFVGAG 156
+S + +Y+ ++ R +D + + M RC+ + T N + V R G
Sbjct: 290 NSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR---CG 346
Query: 157 QWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFN 215
A+A R+F +L+ G + + N LL +E E+ +++Y ++ K + T+N
Sbjct: 347 LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYN 406
Query: 216 IFIHGWCKIRRVEEAHWTIQEMKGYGCR-PCVISYSTIIQCYCNEQNFSKVYELLDEMQA 274
IH + K +++ A ++MKG R P I+Y+ +I + L+ EM
Sbjct: 407 TIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLD 466
Query: 275 QDCSPNVVTYTIIMCALAKAEKFDEA 300
P + TY+ ++C AKA K +EA
Sbjct: 467 VGIKPTLQTYSALICGYAKAGKREEA 492
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 88/178 (49%), Gaps = 8/178 (4%)
Query: 128 DLLDQMRCEG---SIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLL 184
+LLD +R G IT NT+ R AV++F+D++ + + + N ++
Sbjct: 283 ELLDMVRNSGLRPDAITYNTLLSACSR---DSNLDGAVKVFEDMEAHRCQPDLWTYNAMI 339
Query: 185 DTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCR 243
+ +A ++++EL+ + P+A T+N ++ + + R E+ Q+M+ G
Sbjct: 340 SVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFG 399
Query: 244 PCVISYSTIIQCYCNEQNFSKVYELLDEMQA-QDCSPNVVTYTIIMCALAKAEKFDEA 300
++Y+TII Y + +L +M+ +P+ +TYT+++ +L KA + EA
Sbjct: 400 KDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEA 457
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 94/201 (46%), Gaps = 8/201 (3%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEG---SIITLNTIAKVMRRFVGAGQWADAVRIF 165
+Y+ ++ R + +K++++ QM+ G +T NTI + + GQ A++++
Sbjct: 369 TYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTI---IHMYGKQGQLDLALQLY 425
Query: 166 DDLQTL-GLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCK 223
D++ L G + + +L+D+L K +A + E L I P T++ I G+ K
Sbjct: 426 KDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAK 485
Query: 224 IRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVT 283
+ EEA T M G +P ++YS ++ K + L +M + +P+
Sbjct: 486 AGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTL 545
Query: 284 YTIIMCALAKAEKFDEALQVI 304
Y +++ L K + D+ + I
Sbjct: 546 YELMILGLMKENRSDDIQKTI 566
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 90/218 (41%), Gaps = 36/218 (16%)
Query: 124 DKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLL 183
++ R + + M +G T+ +I ++ G+ + + ++LQ +G + + S+ L+
Sbjct: 804 ERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLM 863
Query: 184 LDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEM----- 237
LD + + + ++IY +K P + + I CK +RV +A + EM
Sbjct: 864 LDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANF 923
Query: 238 ------------------------------KGYGCRPCVISYSTIIQCYCNEQNFSKVYE 267
K G P +Y+T+I YC ++ + Y
Sbjct: 924 KVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYL 983
Query: 268 LLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
L+ +M+ P + TY ++ A K + ++A Q+ E
Sbjct: 984 LMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFE 1021
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/188 (19%), Positives = 85/188 (45%), Gaps = 1/188 (0%)
Query: 102 NFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADA 161
F+ S S +M+D R + +++ + M+ G + T+ ++ + DA
Sbjct: 852 GFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDA 911
Query: 162 VRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHG 220
+ +++ + N +L E ++ Q+Y +K+ + P+ T+N I
Sbjct: 912 EIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIM 971
Query: 221 WCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPN 280
+C+ RR EE + +Q+M+ G P + +Y ++I + ++ + +L +E+ ++ +
Sbjct: 972 YCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLD 1031
Query: 281 VVTYTIIM 288
Y +M
Sbjct: 1032 RSFYHTMM 1039
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 108/233 (46%), Gaps = 15/233 (6%)
Query: 84 KDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQM-RCEGSIIT- 141
++ W+ AL +F+W +L HSP + M+ ILG + ++ ++ R E ++
Sbjct: 168 QESWQRALEVFEWLNLR--HWHSPNAR-MVAAILGVLGRWNQESLAVEIFTRAEPTVGDR 224
Query: 142 LNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYL 201
+ +M + +G+++ A + D ++ G + S N L++ K + + +
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTP--NLAV 282
Query: 202 EL-----KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCY 256
EL + P+A T+N + + ++ A ++M+ + C+P + +Y+ +I Y
Sbjct: 283 ELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVY 342
Query: 257 CNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAK---AEKFDEALQVIER 306
++ L E++ + P+ VTY ++ A A+ EK E Q +++
Sbjct: 343 GRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQK 395
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 99/210 (47%), Gaps = 7/210 (3%)
Query: 99 LHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEG---SIITLNTIAKVMRRFVGA 155
L F +Y++++ R+ MD+ L D+M +G T N + ++ +
Sbjct: 246 LEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGK---G 302
Query: 156 GQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTF 214
+ A+ + ++ +G++ + L+D L + +E + E+ K P+ +
Sbjct: 303 NKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCY 362
Query: 215 NIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQA 274
+ I G+ +++A +EM G P V +Y+++I+ C F + LL EM++
Sbjct: 363 TVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMES 422
Query: 275 QDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+ C+PN V Y+ ++ L KA K EA +VI
Sbjct: 423 RGCNPNFVVYSTLVSYLRKAGKLSEARKVI 452
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 104/253 (41%), Gaps = 36/253 (14%)
Query: 88 KSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNT--- 144
K A F W+ F+H+ SY +++ I + L+D+M +G T T
Sbjct: 130 KLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNL 189
Query: 145 ---------IAK-----------------------VMRRFVGAGQWADAVRIFDDLQTLG 172
+AK ++ +G Q+ ++ + G
Sbjct: 190 LICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDG 249
Query: 173 LEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAH 231
+ + N+LL T + +++ +++ E+ + +P+++T+NI +H K + A
Sbjct: 250 FSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAAL 309
Query: 232 WTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCAL 291
T+ MK G P V+ Y+T+I N LDEM C P+VV YT+++
Sbjct: 310 TTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGY 369
Query: 292 AKAEKFDEALQVI 304
+ + D+A ++
Sbjct: 370 VVSGELDKAKEMF 382
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 7/203 (3%)
Query: 102 NFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEG---SIITLNTIAKVMRRFVGAGQW 158
N++ SY+ +++ L +K + + QM +G ++T N + R G+
Sbjct: 214 NYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRL---GKM 270
Query: 159 ADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIF 217
R+FD++ G ++ + N+LL L K A +K+ I P+ +
Sbjct: 271 DRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTL 330
Query: 218 IHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDC 277
I G + +E + + EM GCRP V+ Y+ +I Y K E+ EM +
Sbjct: 331 IDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQ 390
Query: 278 SPNVVTYTIIMCALAKAEKFDEA 300
PNV TY ++ L A +F EA
Sbjct: 391 LPNVFTYNSMIRGLCMAGEFREA 413
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 9/173 (5%)
Query: 106 SPESY--DMMVDILGRMKVMDKLRDLLDQMRCEG---SIITLNTIAKVMRRFVGAGQWAD 160
SP+SY ++++ ILG+ L+ M+ G S++ T+ + R AG
Sbjct: 286 SPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSR---AGNLEA 342
Query: 161 AVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIH 219
D++ G + +++ +++A++++ E+ + PN T+N I
Sbjct: 343 CKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 402
Query: 220 GWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEM 272
G C EA W ++EM+ GC P + YST++ S+ +++ EM
Sbjct: 403 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREM 455
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 98/215 (45%), Gaps = 6/215 (2%)
Query: 93 LFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRF 152
+F +AS NF+HS S+ +++ LGR + + + D+L + R G +T +++ +
Sbjct: 70 IFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVY 129
Query: 153 VGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEE-FVEQARQIYLELKQH-IAPN 210
A + F + + +N +LD L ++++A +++ + H + PN
Sbjct: 130 AEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPN 189
Query: 211 AHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLD 270
++N+ + +C + A+ +M P V SY +IQ +C + + ELLD
Sbjct: 190 TRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLD 249
Query: 271 EMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+M + P+ ++ L FDE + +E
Sbjct: 250 DMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLE 280
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 87/183 (47%), Gaps = 4/183 (2%)
Query: 125 KLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLL 184
+L DL+ + + I N + ++ + + DA + F++L +E + + N ++
Sbjct: 587 QLFDLMQRNKISADIAVCNVVIHLLFK---CHRIEDASKFFNNLIEGKMEPDIVTYNTMI 643
Query: 185 DTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCR 243
C +++A +I+ LK PN T I IH CK ++ A M G +
Sbjct: 644 CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 703
Query: 244 PCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
P ++Y ++ + + ++L +EMQ + SP++V+Y+II+ L K + DEA +
Sbjct: 704 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 763
Query: 304 IER 306
+
Sbjct: 764 FHQ 766
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 1/172 (0%)
Query: 123 MDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNL 182
MD+ DL M G L + ++ + AG ++F G++ + +
Sbjct: 302 MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSS 361
Query: 183 LLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYG 241
+D K + A +Y L Q I+PN T+ I I G C+ R+ EA ++ G
Sbjct: 362 TIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRG 421
Query: 242 CRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAK 293
P +++YS++I +C N + L ++M P+VV Y +++ L+K
Sbjct: 422 MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK 473
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 4/171 (2%)
Query: 136 EGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQ 195
E SI+T +++ + F G +++D+ +G + +L+D L K+ +
Sbjct: 423 EPSIVTYSSL---IDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 196 ARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQ 254
A + ++ L Q I N FN I GWC++ R +EA + M YG +P V +++T+++
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 255 CYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
E + L M P+ + Y ++ A K K LQ+ +
Sbjct: 540 VSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFD 590
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 89/195 (45%), Gaps = 1/195 (0%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
++ ++D R+ D+ + M G + T VMR + G+ +A+ +F +
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMF 558
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGWCKIRRVE 228
+GLE + + L+D CK Q++ L + I+ + N+ IH K R+E
Sbjct: 559 KMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE 618
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
+A + P +++Y+T+I YC+ + + + + ++ PN VT TI++
Sbjct: 619 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 678
Query: 289 CALAKAEKFDEALQV 303
L K D A+++
Sbjct: 679 HVLCKNNDMDGAIRM 693
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 4/188 (2%)
Query: 119 RMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTE 178
R++ K + L + + E I+T NT+ + + + +A RIF+ L+ NT
Sbjct: 616 RIEDASKFFNNLIEGKMEPDIVTYNTM---ICGYCSLRRLDEAERIFELLKVTPFGPNTV 672
Query: 179 SMNLLLDTLCKEEFVEQA-RQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEM 237
++ +L+ LCK ++ A R + ++ PNA T+ + + K +E + +EM
Sbjct: 673 TLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 732
Query: 238 KGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKF 297
+ G P ++SYS II C + + + P+VV Y I++ K +
Sbjct: 733 QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRL 792
Query: 298 DEALQVIE 305
EA + E
Sbjct: 793 VEAALLYE 800
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 100/258 (38%), Gaps = 43/258 (16%)
Query: 90 ALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAK-- 147
AL +F +++ Y M+ ++G +V D + D D++ C G I A
Sbjct: 165 ALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRV-DLIADHFDKL-CRGGIEPSGVSAHGF 222
Query: 148 VMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHI 207
V+ G+ A+ + G S N +L L ++ +R + L L
Sbjct: 223 VLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGP 282
Query: 208 APNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYE 267
APN TF I+G+CK ++ A + M+ G P +I+YST+I Y ++
Sbjct: 283 APNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK 342
Query: 268 LLDE-----------------------------------MQAQDCSPNVVTYTIIMCALA 292
L + M Q SPNVVTYTI++ L
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 293 KAEKFDEAL----QVIER 306
+ + EA Q+++R
Sbjct: 403 QDGRIYEAFGMYGQILKR 420
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 59/121 (48%), Gaps = 1/121 (0%)
Query: 161 AVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIH 219
A+R+F + G + N + L+D K +E + +++ E+++ I+P+ +++I I
Sbjct: 690 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 749
Query: 220 GWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSP 279
G CK RV+EA + P V++Y+ +I+ YC + L + M P
Sbjct: 750 GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 809
Query: 280 N 280
+
Sbjct: 810 D 810
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 87/183 (47%), Gaps = 4/183 (2%)
Query: 125 KLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLL 184
+L DL+ + + I N + ++ + + DA + F++L +E + + N ++
Sbjct: 558 QLFDLMQRNKISADIAVCNVVIHLLFK---CHRIEDASKFFNNLIEGKMEPDIVTYNTMI 614
Query: 185 DTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCR 243
C +++A +I+ LK PN T I IH CK ++ A M G +
Sbjct: 615 CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 674
Query: 244 PCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
P ++Y ++ + + ++L +EMQ + SP++V+Y+II+ L K + DEA +
Sbjct: 675 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 734
Query: 304 IER 306
+
Sbjct: 735 FHQ 737
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 1/172 (0%)
Query: 123 MDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNL 182
MD+ DL M G L + ++ + AG ++F G++ + +
Sbjct: 302 MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSS 361
Query: 183 LLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYG 241
+D K + A +Y L Q I+PN T+ I I G C+ R+ EA ++ G
Sbjct: 362 TIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRG 421
Query: 242 CRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAK 293
P +++YS++I +C N + L ++M P+VV Y +++ L+K
Sbjct: 422 MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK 473
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 81/172 (47%), Gaps = 10/172 (5%)
Query: 136 EGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQ 195
E SI+T +++ + F G +++D+ +G + +L+D L K+ +
Sbjct: 423 EPSIVTYSSL---IDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 196 ARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQ 254
A + ++ L Q I N FN I GWC++ R +EA + M YG +P V +++T+++
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 255 CYCNEQNFSK------VYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
E F K +L D MQ S ++ +++ L K + ++A
Sbjct: 540 VSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDA 591
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 4/188 (2%)
Query: 119 RMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTE 178
R++ K + L + + E I+T NT+ + + + +A RIF+ L+ NT
Sbjct: 587 RIEDASKFFNNLIEGKMEPDIVTYNTM---ICGYCSLRRLDEAERIFELLKVTPFGPNTV 643
Query: 179 SMNLLLDTLCKEEFVEQA-RQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEM 237
++ +L+ LCK ++ A R + ++ PNA T+ + + K +E + +EM
Sbjct: 644 TLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 703
Query: 238 KGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKF 297
+ G P ++SYS II C + + + P+VV Y I++ K +
Sbjct: 704 QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRL 763
Query: 298 DEALQVIE 305
EA + E
Sbjct: 764 VEAALLYE 771
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 100/258 (38%), Gaps = 43/258 (16%)
Query: 90 ALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAK-- 147
AL +F +++ Y M+ ++G +V D + D D++ C G I A
Sbjct: 165 ALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRV-DLIADHFDKL-CRGGIEPSGVSAHGF 222
Query: 148 VMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHI 207
V+ G+ A+ + G S N +L L ++ +R + L L
Sbjct: 223 VLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGP 282
Query: 208 APNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYE 267
APN TF I+G+CK ++ A + M+ G P +I+YST+I Y ++
Sbjct: 283 APNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK 342
Query: 268 LLDE-----------------------------------MQAQDCSPNVVTYTIIMCALA 292
L + M Q SPNVVTYTI++ L
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 293 KAEKFDEAL----QVIER 306
+ + EA Q+++R
Sbjct: 403 QDGRIYEAFGMYGQILKR 420
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 59/121 (48%), Gaps = 1/121 (0%)
Query: 161 AVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIH 219
A+R+F + G + N + L+D K +E + +++ E+++ I+P+ +++I I
Sbjct: 661 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 720
Query: 220 GWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSP 279
G CK RV+EA + P V++Y+ +I+ YC + L + M P
Sbjct: 721 GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 780
Query: 280 N 280
+
Sbjct: 781 D 781
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 96/226 (42%), Gaps = 19/226 (8%)
Query: 93 LFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRF 152
LF WAS F H SY + + LG K+ ++ D+++Q+ I N ++ F
Sbjct: 158 LFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYF 217
Query: 153 VGAGQWADAVRIFDDLQTLGLEKNTE------SMNLLLDTL--------CKEEFVEQARQ 198
AG+ AV IF + T KN E + ++L L ++E R
Sbjct: 218 TKAGKLIRAVNIFRHMVT---SKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRS 274
Query: 199 IYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMK-GYGCRPCVISYSTIIQCY 256
++ ++ I P+ N + G+ V +A +M Y C P +Y +I
Sbjct: 275 LFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 334
Query: 257 CNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQ 302
C + ELL EM+ + PN +Y ++ A A + + D+A++
Sbjct: 335 CAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVK 380
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 109/242 (45%), Gaps = 10/242 (4%)
Query: 69 IHLSPN------LINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKV 122
I L PN LI++ RR K D +AL F + + + S Y+ +++ +
Sbjct: 396 IGLRPNDVTYSILIDMFCRRGKLD--TALS-FLGEMVDTGLKLSVYPYNSLINGHCKFGD 452
Query: 123 MDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNL 182
+ + +M + T+ T +M + G+ A+R++ ++ G+ + +
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTT 512
Query: 183 LLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYG 241
LL L + + A +++ E+ + ++ PN T+N+ I G+C+ + +A ++EM G
Sbjct: 513 LLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG 572
Query: 242 CRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEAL 301
P SY +I C S+ +D + +C N + YT ++ + K +EAL
Sbjct: 573 IVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEAL 632
Query: 302 QV 303
V
Sbjct: 633 SV 634
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 76/149 (51%), Gaps = 1/149 (0%)
Query: 157 QWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFN 215
++ +A +FD + +GL N + ++L+D C+ ++ A E+ + + + +N
Sbjct: 382 KFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYN 441
Query: 216 IFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQ 275
I+G CK + A + EM P V++Y++++ YC++ +K L EM +
Sbjct: 442 SLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK 501
Query: 276 DCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+P++ T+T ++ L +A +A+++
Sbjct: 502 GIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 1/195 (0%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
Y M+D + + + D M EG + T V+ AG +A + +Q
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744
Query: 170 TLGLEKNTESMNLLLDTLCKEEF-VEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVE 228
+ N + LD L K E +++A +++ + + + N T+N+ I G+C+ R+E
Sbjct: 745 PVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIE 804
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
EA I M G G P I+Y+T+I C + K EL + M + P+ V Y ++
Sbjct: 805 EASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLI 864
Query: 289 CALAKAEKFDEALQV 303
A + +A ++
Sbjct: 865 HGCCVAGEMGKATEL 879
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 89/170 (52%), Gaps = 9/170 (5%)
Query: 142 LNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYL 201
+ T++ ++ V + A+ +F+D+ ++G+ + ++ +LC+ + + +A+++
Sbjct: 192 VRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIA 251
Query: 202 ELKQ-----HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCY 256
++ +I P +N+ I G CK ++V EA +++ G +P V++Y T++
Sbjct: 252 HMEATGCDVNIVP----YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGL 307
Query: 257 CNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
C Q F E++DEM SP+ + ++ L K K +EAL +++R
Sbjct: 308 CKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKR 357
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 116/259 (44%), Gaps = 28/259 (10%)
Query: 68 AIHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVM---- 123
+H+ LI + DD K L F + LH F HS S+ +++ L + +
Sbjct: 70 TVHVEEILIGTI-----DDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPAS 124
Query: 124 ----------DKLRDLLDQM-----RCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
K D+ + + +C+ + + ++ +++ +V + + D V +F +
Sbjct: 125 SLLQTLLLRALKPSDVFNVLFSCYEKCK--LSSSSSFDLLIQHYVRSRRVLDGVLVFKMM 182
Query: 169 QT-LGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRR 226
T + L +++ LL L K A +++ ++ I P+ + + I C+++
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242
Query: 227 VEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTI 286
+ A I M+ GC ++ Y+ +I C +Q + + ++ +D P+VVTY
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCT 302
Query: 287 IMCALAKAEKFDEALQVIE 305
++ L K ++F+ L++++
Sbjct: 303 LVYGLCKVQEFEIGLEMMD 321
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 80/167 (47%), Gaps = 1/167 (0%)
Query: 123 MDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNL 182
++K L +M +G ++ T ++ AG DAV++F+++ ++ N + N+
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547
Query: 183 LLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYG 241
+++ C+E + +A + E+ ++ I P+ +++ IHG C + EA + +
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607
Query: 242 CRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
C I Y+ ++ +C E + + EM + ++V Y +++
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 72/173 (41%), Gaps = 36/173 (20%)
Query: 168 LQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIR- 225
++ G + N N+L+D LCK++ V +A I +L + + P+ T+ ++G CK++
Sbjct: 253 MEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQE 312
Query: 226 ----------------------------------RVEEAHWTIQEMKGYGCRPCVISYST 251
++EEA ++ + +G P + Y+
Sbjct: 313 FEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNA 372
Query: 252 IIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+I C + F + L D M PN VTY+I++ + K D AL +
Sbjct: 373 LIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 172 GLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEA 230
GL NT + N+L+ C++ +E+A ++ + ++P+ T+ I+ C+ V++A
Sbjct: 782 GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKA 841
Query: 231 HWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPN 280
M G RP ++Y+T+I C K EL +EM Q PN
Sbjct: 842 IELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 115/252 (45%), Gaps = 24/252 (9%)
Query: 70 HLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDL 129
++ P ++I L++ AL F W H F H+ + M +L + L D
Sbjct: 97 YMDPKKVSIGLQK-------ALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDF 149
Query: 130 LDQM--RCEG-SIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDT 186
L Q+ R G +++T +I +M+ G +A+ F ++ + + + N +++
Sbjct: 150 LRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINA 209
Query: 187 LCKEEFVEQARQIYLELKQ---HIAPNAHTFNIFIHGWCKI-----------RRVEEAHW 232
LC+ ++AR + +++ P+ +T+ I I +C+ RR+ EA+
Sbjct: 210 LCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANR 269
Query: 233 TIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALA 292
+EM G P V++Y+ +I C + EL ++M+ + C PN VTY + +
Sbjct: 270 MFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYS 329
Query: 293 KAEKFDEALQVI 304
+ + A++++
Sbjct: 330 VTNEIEGAIEMM 341
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 82/190 (43%), Gaps = 18/190 (9%)
Query: 130 LDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLE--KNTESMNLLLDTL 187
+ + C+ + NTI + R G + A + D +Q G +T + +L+ +
Sbjct: 191 MKEYHCKPDVYAYNTIINALCR---VGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSY 247
Query: 188 CK-----------EEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQ 235
C+ + +A +++ E L + P+ T+N I G CK R+ A +
Sbjct: 248 CRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFE 307
Query: 236 EMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCS-PNVVTYTIIMCALAKA 294
+MK GC P ++Y++ I+ Y E++ M+ P TYT ++ AL +
Sbjct: 308 DMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVET 367
Query: 295 EKFDEALQVI 304
+ EA ++
Sbjct: 368 RRAAEARDLV 377
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 14/144 (9%)
Query: 176 NTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTI 234
T S+ L+ L +E FV++A + +K+ H P+ + +N I+ C++ ++A + +
Sbjct: 164 TTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLL 223
Query: 235 QEMKGYGCR--PCVISYSTIIQCYCN-----------EQNFSKVYELLDEMQAQDCSPNV 281
+M+ G R P +Y+ +I YC + + + EM + P+V
Sbjct: 224 DQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDV 283
Query: 282 VTYTIIMCALAKAEKFDEALQVIE 305
VTY ++ K + AL++ E
Sbjct: 284 VTYNCLIDGCCKTNRIGRALELFE 307
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 83/167 (49%), Gaps = 5/167 (2%)
Query: 142 LNTIAKVMRRFVGAGQWADAVRIFDDL--QTLGLEKNTESMNLLLDTLCKEEFVEQARQI 199
+NT+ + + + QW A+ +FD L QT K M LL+ L K +A+++
Sbjct: 88 VNTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLV-LLGKSGQPNRAQKL 146
Query: 200 YLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYG-CRPCVISYSTIIQCYC 257
+ E L++ + P + + + + +++A + +MK + C+P V +YST+++
Sbjct: 147 FDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACV 206
Query: 258 NEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+ F V L EM + +PN VT I++ + +FD+ +V+
Sbjct: 207 DASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVL 253
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 96/225 (42%), Gaps = 3/225 (1%)
Query: 84 KDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLN 143
K W AL +F + +Q +Y ++ +LG+ ++ + L D+M EG T+
Sbjct: 101 KKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVE 160
Query: 144 TIAKVMRRFVGAGQWADAVRIFDDLQTLGL-EKNTESMNLLLDTLCKEEFVEQARQIYLE 202
++ + + DA I D +++ + + + + LL + +Y E
Sbjct: 161 LYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKE 220
Query: 203 LKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEM-KGYGCRPCVISYSTIIQCYCNEQ 260
+ + I PN T NI + G+ ++ R ++ + +M C+P V + + I+ + N
Sbjct: 221 MDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMG 280
Query: 261 NFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+ ++ + P T+ I++ + K +D+ V+E
Sbjct: 281 KIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVME 325
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 80/192 (41%), Gaps = 5/192 (2%)
Query: 117 LGRMKVMDK-LRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEK 175
+GR M+K L D+L C+ + T+N I V F G+ ++ + G+E
Sbjct: 243 VGRFDQMEKVLSDMLVSTACKPDVWTMNIILSV---FGNMGKIDMMESWYEKFRNFGIEP 299
Query: 176 NTESMNLLLDTLCKEEFVEQARQIYLELKQHIAP-NAHTFNIFIHGWCKIRRVEEAHWTI 234
T + N+L+ + K+ ++ + +++ P T+N I + + + T
Sbjct: 300 ETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTF 359
Query: 235 QEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKA 294
+M+ G + ++ +I Y N F KV + + N Y ++ A AKA
Sbjct: 360 DQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKA 419
Query: 295 EKFDEALQVIER 306
+ E +V R
Sbjct: 420 DDLIEMERVYIR 431
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 4/165 (2%)
Query: 141 TLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY 200
T N + V F + + + ++ G E + + N L+ + C+ +++A +Y
Sbjct: 238 TFNILTNV---FCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLY 294
Query: 201 -LELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNE 259
+ ++ + P+ T+ I G CK RV EAH T M G +P +SY+T+I YC E
Sbjct: 295 KIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKE 354
Query: 260 QNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+ +LL EM P+ T +I+ + + A+ +
Sbjct: 355 GMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFV 399
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 130/301 (43%), Gaps = 34/301 (11%)
Query: 32 QCQSLMRSVDILTSKVAKGSSEEEIIRSLCNDQACDAI-HLSPNLINILLRRYKDDWKSA 90
Q Q+ + VD++ S + S+ ++ D+ I HL I+ +L R++ D A
Sbjct: 39 QSQNPSKIVDVICSTL--NHSDYSVLLPNLRDEVKSLIPHLGYPEISRVLLRFQSDASRA 96
Query: 91 LGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAK--- 147
+ FKW + + +Y +++ IL V K L Q CE +I L + +
Sbjct: 97 ITFFKWVKFDLGKRPNVGNYCLLLHIL----VSSKKFPLAMQFLCE--LIELTSKKEEVD 150
Query: 148 VMRRFVGA---------------------GQWADAVRIFDDLQTLGLEKNTESMNLLLDT 186
V R V A G + R+F ++ G + + N LL+
Sbjct: 151 VFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNG 210
Query: 187 LCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPC 245
L K + +E Q+Y + + I PN +TFNI + +C E +++M+ G P
Sbjct: 211 LLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPD 270
Query: 246 VISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+++Y+T++ YC + + L M + P++VTYT ++ L K + EA Q
Sbjct: 271 LVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFH 330
Query: 306 R 306
R
Sbjct: 331 R 331
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 9/179 (5%)
Query: 128 DLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTL 187
DLL +MR G + ++++ G+ DA + DD+ G + + +D L
Sbjct: 530 DLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGL 589
Query: 188 CKEEFVEQARQIYLELKQHIAPNAH-----TFNIFIHGWCKIRRVEEAHWTIQEMKGYGC 242
K E V++ LEL + I N H +++ I CK R EA EM G
Sbjct: 590 IKNEGVDRG----LELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGL 645
Query: 243 RPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEAL 301
+P V +Y+++I +C E + + M + +P+V+TYT ++ L + + EA+
Sbjct: 646 KPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAI 704
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 104/246 (42%), Gaps = 14/246 (5%)
Query: 71 LSPNL----INILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKL 126
LSP L + +L +K W A F WAS +++ +Y+ M IL R + L
Sbjct: 67 LSPELNTKVVETVLNGFKR-WGLAYLFFNWASKQEGYRNDMYAYNAMASILSRARQNASL 125
Query: 127 RDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGL-EKNTESMNLLLD 185
+ L+ + ++ +R AG +A +FD ++ +GL N + N LL+
Sbjct: 126 KALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLE 185
Query: 186 TLCKE-----EFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGY 240
+ K E VE + + H + T + +C + E A E+
Sbjct: 186 AISKSNSSSVELVEARLKEMRDCGFHF--DKFTLTPVLQVYCNTGKSERALSVFNEILSR 243
Query: 241 GCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
G IS + ++ +C K +EL++ ++ +D N TY +++ K + D+A
Sbjct: 244 GWLDEHIS-TILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKA 302
Query: 301 LQVIER 306
Q+ E+
Sbjct: 303 FQLFEK 308
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 94/202 (46%), Gaps = 4/202 (1%)
Query: 106 SPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
SP+ +D +V + ++++Q R EG ++++ + M + + +++
Sbjct: 147 SPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVY 206
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQI-YLELKQHIAPNAHTFNIFIHGWCK- 223
++ +LG +N + NL++ + CKE + +A + Y LK + PN +FN+ I G CK
Sbjct: 207 KEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKT 266
Query: 224 --IRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNV 281
+R + + M G P ++Y+++I +C + +M N
Sbjct: 267 GDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNE 326
Query: 282 VTYTIIMCALAKAEKFDEALQV 303
TY ++ A +A DEAL++
Sbjct: 327 RTYGALVDAYGRAGSSDEALRL 348
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 84/186 (45%), Gaps = 1/186 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y +VD GR D+ L D+M +G ++ ++ G A+ + D+
Sbjct: 328 TYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDM 387
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRV 227
+ ++ + + +++ LC+ +V++A + ++ ++ + + N +H + + +++
Sbjct: 388 NSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKL 447
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
A + M G IS+ T+I Y E + E+ D M + + N+V Y I
Sbjct: 448 ACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSI 507
Query: 288 MCALAK 293
+ L+K
Sbjct: 508 VNGLSK 513
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 118/253 (46%), Gaps = 12/253 (4%)
Query: 54 EEIIRSLCNDQACDAIHLSPN--LINILLRRYK--DDWKSALGLFKWASLHSNFQHSPES 109
EE+ +L +++ L P+ + ++++ YK +++ A +F + + S +
Sbjct: 236 EEVFETLLDEKKS---PLKPDQKMYHMMIYMYKKAGNYEKARKVFS-SMVGKGVPQSTVT 291
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
Y+ ++ K + K+ D + + + +++ + K R A + +A+ +F+++
Sbjct: 292 YNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGR---ARREEEALSVFEEML 348
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVE 228
G+ ++ N+LLD VEQA+ ++ +++ I P+ ++ + + +E
Sbjct: 349 DAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDME 408
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
A + +K G P +++Y T+I+ Y + K+ E+ ++M+ N T IM
Sbjct: 409 GAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIM 468
Query: 289 CALAKAEKFDEAL 301
A + + F AL
Sbjct: 469 DASGRCKNFGSAL 481
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 88/201 (43%), Gaps = 10/201 (4%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEG---SIITLNTIAKVMRRFVGAGQWADAVRIFD 166
Y MM+ + + +K R + M +G S +T N++ + + +I+D
Sbjct: 257 YHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF------ETSYKEVSKIYD 310
Query: 167 DLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIR 225
+Q ++ + S LL+ + E+A ++ E L + P +NI + +
Sbjct: 311 QMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISG 370
Query: 226 RVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYT 285
VE+A + M+ P + SY+T++ Y N + + ++ PN+VTY
Sbjct: 371 MVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYG 430
Query: 286 IIMCALAKAEKFDEALQVIER 306
++ AKA ++ ++V E+
Sbjct: 431 TLIKGYAKANDVEKMMEVYEK 451
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 113/279 (40%), Gaps = 40/279 (14%)
Query: 67 DAIHLSPNLINILLR-RYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDK 125
D + PN+++I + + +AL LF+WA + S E Y ++ D L + +
Sbjct: 164 DKLQFVPNMVHITQSLKIVKEVDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVG 223
Query: 126 LRDLLDQM--------------------------------------RCEGSIITLNTIAK 147
++ L ++M + G I T
Sbjct: 224 IQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNN 283
Query: 148 VMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH- 206
+M F+ G A I++ ++ + + L++ +L K ++ A +++ ++K+
Sbjct: 284 LMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERK 343
Query: 207 IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVY 266
+ P+ F+ + K R++ + EM+G+G RP + ++I Y
Sbjct: 344 LRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTAL 403
Query: 267 ELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
L DEM+ PN YT+I+ + AK+ K + A+ V +
Sbjct: 404 RLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFK 442
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 101/252 (40%), Gaps = 23/252 (9%)
Query: 44 TSKVAKGSSEEEIIRSLCNDQACDAIHLSPNLINILLRRYKDDWKSALGLFKWASLHSNF 103
T + GS+ E II SL DA A LF+
Sbjct: 307 TDSLLDGSTYELIIPSLAKSGRLDA---------------------AFKLFQQMK-ERKL 344
Query: 104 QHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVR 163
+ S + +VD +G+ +D + +M+ G + ++ + AG+ A+R
Sbjct: 345 RPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALR 404
Query: 164 IFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWC 222
++D+++ G N +++++ K +E A ++ ++ K P T++ +
Sbjct: 405 LWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHA 464
Query: 223 KIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVV 282
+V+ A M G RP + SY +++ N++ ++L EM+A S +V
Sbjct: 465 GSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVC 524
Query: 283 TYTIIMCALAKA 294
++M + A
Sbjct: 525 ASDVLMIYIKDA 536
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 118/253 (46%), Gaps = 12/253 (4%)
Query: 54 EEIIRSLCNDQACDAIHLSPN--LINILLRRYK--DDWKSALGLFKWASLHSNFQHSPES 109
EE+ +L +++ L P+ + ++++ YK +++ A +F + + S +
Sbjct: 229 EEVFETLLDEKKS---PLKPDQKMYHMMIYMYKKAGNYEKARKVFS-SMVGKGVPQSTVT 284
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
Y+ ++ K + K+ D + + + +++ + K R A + +A+ +F+++
Sbjct: 285 YNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGR---ARREEEALSVFEEML 341
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVE 228
G+ ++ N+LLD VEQA+ ++ +++ I P+ ++ + + +E
Sbjct: 342 DAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDME 401
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
A + +K G P +++Y T+I+ Y + K+ E+ ++M+ N T IM
Sbjct: 402 GAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIM 461
Query: 289 CALAKAEKFDEAL 301
A + + F AL
Sbjct: 462 DASGRCKNFGSAL 474
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 88/201 (43%), Gaps = 10/201 (4%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEG---SIITLNTIAKVMRRFVGAGQWADAVRIFD 166
Y MM+ + + +K R + M +G S +T N++ + + +I+D
Sbjct: 250 YHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF------ETSYKEVSKIYD 303
Query: 167 DLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIR 225
+Q ++ + S LL+ + E+A ++ E L + P +NI + +
Sbjct: 304 QMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISG 363
Query: 226 RVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYT 285
VE+A + M+ P + SY+T++ Y N + + ++ PN+VTY
Sbjct: 364 MVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYG 423
Query: 286 IIMCALAKAEKFDEALQVIER 306
++ AKA ++ ++V E+
Sbjct: 424 TLIKGYAKANDVEKMMEVYEK 444
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 120/269 (44%), Gaps = 43/269 (15%)
Query: 79 LLRRYKDDWKSALGLFKWASLHSN-----FQHSPESYDMMVDILGRMKVMDKLRDLLDQM 133
LLRR ++D +A+ LF+ S F++S YD+++ LG K+ D+L +L +
Sbjct: 15 LLRR-ENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHL 73
Query: 134 RCEGSIITLNTIAKVMRRFVGAGQWAD-AVRIFDDLQTLGLEKNTESMNLLLDTLCKEEF 192
+ + I+ I + F G G+ A+ +FD++ ++ +S+N LL L K
Sbjct: 74 KTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGE 133
Query: 193 VEQARQIYLELKQHIAPNAHTFNI-----------------------------------F 217
+E+ ++ + + P+A T+NI
Sbjct: 134 LEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTL 193
Query: 218 IHGWCKIRRVEEAHWTIQEM-KGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQD 276
IHG CK RV+EA +M K YG RP V Y+++I+ C S ++L DE
Sbjct: 194 IHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGK 253
Query: 277 CSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+ Y+ ++ +L KA + +E ++E
Sbjct: 254 IKVDAAIYSTLISSLIKAGRSNEVSMILE 282
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 93/186 (50%), Gaps = 1/186 (0%)
Query: 121 KVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESM 180
+V + L+ D ++ G T++ A +++ G+ + A ++ D+ ++ +
Sbjct: 202 RVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIY 261
Query: 181 NLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKG 239
+ L+ +L K + I E+ + P+ T+N+ I+G+C E A+ + EM
Sbjct: 262 STLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVE 321
Query: 240 YGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDE 299
G +P VISY+ I+ + + + + L ++M + CSP+ ++Y I+ L + +F+E
Sbjct: 322 KGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEE 381
Query: 300 ALQVIE 305
A +++
Sbjct: 382 AAVILD 387
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 73/146 (50%), Gaps = 2/146 (1%)
Query: 136 EGSI-ITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVE 194
EG I + + ++ + AG+ + I +++ G + +T + N+L++ C E E
Sbjct: 251 EGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSE 310
Query: 195 QARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTII 253
A ++ E+ ++ + P+ ++N+ + + +I++ EEA + ++M GC P +SY +
Sbjct: 311 SANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVF 370
Query: 254 QCYCNEQNFSKVYELLDEMQAQDCSP 279
C F + +LDEM + P
Sbjct: 371 DGLCEGLQFEEAAVILDEMLFKGYKP 396
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 1/151 (0%)
Query: 155 AGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTF 214
G A IF ++ LGL + ++D C ++A Q + L + P + T
Sbjct: 386 TGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTT 445
Query: 215 NIFIHGWC-KIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQ 273
+ + G C + + +A + MK G + V++Y+ ++ Y +KV+EL+DEM+
Sbjct: 446 STILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMR 505
Query: 274 AQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+ SP+V TY I++ ++ DEA ++I
Sbjct: 506 SAGISPDVATYNILIHSMVVRGYIDEANEII 536
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 89/184 (48%), Gaps = 1/184 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+ ++ G+ ++K+ +L+D+MR G + T ++ V G +A I +L
Sbjct: 480 TYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISEL 539
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRV 227
G +T + ++ K ++A ++ + + P+ T + +HG+CK +R+
Sbjct: 540 IRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRM 599
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
E+A ++ G +P V+ Y+T+I YC+ + K EL+ M + PN T+ +
Sbjct: 600 EKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHAL 659
Query: 288 MCAL 291
+ L
Sbjct: 660 VLGL 663
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 92/198 (46%), Gaps = 1/198 (0%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
Y M+D + DK + G+ +L T ++ G +DA +F +++
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMK 470
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVE 228
T GL+ + + N L+ K + + ++ E++ I+P+ T+NI IH ++
Sbjct: 471 TEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYID 530
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
EA+ I E+ G P ++++ +I + +F + + L M P+VVT + ++
Sbjct: 531 EANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALL 590
Query: 289 CALAKAEKFDEALQVIER 306
KA++ ++A+ + +
Sbjct: 591 HGYCKAQRMEKAIVLFNK 608
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 88/204 (43%), Gaps = 4/204 (1%)
Query: 97 ASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAG 156
A L S S + +++ R + + M+ EG + + T +M +
Sbjct: 433 ALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTH 492
Query: 157 QWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFN 215
Q + D++++ G+ + + N+L+ ++ ++++A +I EL ++ P+ F
Sbjct: 493 QLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFT 552
Query: 216 IFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQ 275
I G+ K +EA M +P V++ S ++ YC Q K L +++
Sbjct: 553 DVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDA 612
Query: 276 DCSPNVVTYTIIM---CALAKAEK 296
P+VV Y ++ C++ EK
Sbjct: 613 GLKPDVVLYNTLIHGYCSVGDIEK 636
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/219 (19%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 119 RMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTE 178
R+ ++ R+ ++ M G + ++ +R++ G + + ++ G+ +
Sbjct: 248 RVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIV 307
Query: 179 SMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTI--- 234
+ + +D LCK F+++A + +LK I+ ++ + + I G+CK+ + EEA I
Sbjct: 308 AFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF 367
Query: 235 -----------------------------QEMKGYGCRPCVISYSTIIQCYCNEQNFSKV 265
QE+ G P + Y+T+I YCN K
Sbjct: 368 RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKA 427
Query: 266 YELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
++ + P++ T TI++ A ++ +A V
Sbjct: 428 FQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVF 466
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 1/151 (0%)
Query: 155 AGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTF 214
G A IF ++ LGL + ++D C ++A Q + L + P + T
Sbjct: 386 TGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTT 445
Query: 215 NIFIHGWC-KIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQ 273
+ + G C + + +A + MK G + V++Y+ ++ Y +KV+EL+DEM+
Sbjct: 446 STILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMR 505
Query: 274 AQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+ SP+V TY I++ ++ DEA ++I
Sbjct: 506 SAGISPDVATYNILIHSMVVRGYIDEANEII 536
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 89/184 (48%), Gaps = 1/184 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+ ++ G+ ++K+ +L+D+MR G + T ++ V G +A I +L
Sbjct: 480 TYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISEL 539
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRV 227
G +T + ++ K ++A ++ + + P+ T + +HG+CK +R+
Sbjct: 540 IRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRM 599
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
E+A ++ G +P V+ Y+T+I YC+ + K EL+ M + PN T+ +
Sbjct: 600 EKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHAL 659
Query: 288 MCAL 291
+ L
Sbjct: 660 VLGL 663
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 92/198 (46%), Gaps = 1/198 (0%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
Y M+D + DK + G+ +L T ++ G +DA +F +++
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMK 470
Query: 170 TLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVE 228
T GL+ + + N L+ K + + ++ E++ I+P+ T+NI IH ++
Sbjct: 471 TEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYID 530
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
EA+ I E+ G P ++++ +I + +F + + L M P+VVT + ++
Sbjct: 531 EANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALL 590
Query: 289 CALAKAEKFDEALQVIER 306
KA++ ++A+ + +
Sbjct: 591 HGYCKAQRMEKAIVLFNK 608
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 88/204 (43%), Gaps = 4/204 (1%)
Query: 97 ASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAG 156
A L S S + +++ R + + M+ EG + + T +M +
Sbjct: 433 ALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTH 492
Query: 157 QWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFN 215
Q + D++++ G+ + + N+L+ ++ ++++A +I EL ++ P+ F
Sbjct: 493 QLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFT 552
Query: 216 IFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQ 275
I G+ K +EA M +P V++ S ++ YC Q K L +++
Sbjct: 553 DVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDA 612
Query: 276 DCSPNVVTYTIIM---CALAKAEK 296
P+VV Y ++ C++ EK
Sbjct: 613 GLKPDVVLYNTLIHGYCSVGDIEK 636
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/219 (19%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 119 RMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTE 178
R+ ++ R+ ++ M G + ++ +R++ G + + ++ G+ +
Sbjct: 248 RVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIV 307
Query: 179 SMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTI--- 234
+ + +D LCK F+++A + +LK I+ ++ + + I G+CK+ + EEA I
Sbjct: 308 AFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF 367
Query: 235 -----------------------------QEMKGYGCRPCVISYSTIIQCYCNEQNFSKV 265
QE+ G P + Y+T+I YCN K
Sbjct: 368 RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKA 427
Query: 266 YELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
++ + P++ T TI++ A ++ +A V
Sbjct: 428 FQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVF 466
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 11/225 (4%)
Query: 91 LGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLL-----DQMRCEGSIITLNTI 145
+F WA+ F+H +S+ M L D L LL + C I + +
Sbjct: 97 FAVFNWAATLDTFRHDHDSFLWMSRSLAATHRFDDLYRLLSFVAANPCPCSSGIFSCPEL 156
Query: 146 AKVMRRFVGA---GQWAD-AVRIFDDLQTL-GLEKNTESMNLLLDTLCKEEFVEQARQIY 200
+ R + A + D A+ FD ++ L + N N +++ K +++A + Y
Sbjct: 157 EPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFY 216
Query: 201 LEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNE 259
+ K+ P+ TFNI I+G+C+ + + A +EMK GC P V+S++T+I+ + +
Sbjct: 217 QRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSS 276
Query: 260 QNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+ ++ EM C + T I++ L + + D+A ++
Sbjct: 277 GKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLV 321
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 96/196 (48%), Gaps = 7/196 (3%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMR---CEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
+++++++ R D DL +M+ CE ++++ NT+ +R F+ +G+ + V++
Sbjct: 230 TFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTL---IRGFLSSGKIEEGVKMA 286
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKI 224
++ LG + + +L+D LC+E V+ A + L+ L + + P+ + + C
Sbjct: 287 YEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGE 346
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
+ A ++E+ G PC I+ +T+++ K +++M P+ VT+
Sbjct: 347 NKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTF 406
Query: 285 TIIMCALAKAEKFDEA 300
+++ L ++ +A
Sbjct: 407 NLLLRDLCSSDHSTDA 422
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 98/199 (49%), Gaps = 3/199 (1%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLN--TIAKVMRRFVGAGQWADAVRIFDD 167
++ ++ G+ +D+ D+L +M+ E I + +I +M+ AGQ A ++
Sbjct: 575 FNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQM 634
Query: 168 LQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRR 226
+ G+ E + +++ K + A IY ++K+ + P+ F+ I +
Sbjct: 635 IHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKM 694
Query: 227 VEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTI 286
++EA +Q+ K G R ISYS+++ CN +++ K EL +++++ P + T
Sbjct: 695 LDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNA 754
Query: 287 IMCALAKAEKFDEALQVIE 305
++ AL + + +A++ ++
Sbjct: 755 LITALCEGNQLPKAMEYLD 773
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Query: 160 DAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFI 218
+A I D ++ G+ T S + L+ C + ++A ++Y ++K + P T N I
Sbjct: 697 EAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALI 756
Query: 219 HGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCS 278
C+ ++ +A + E+K G +P I+YS ++ + +F ++LL + + S
Sbjct: 757 TALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVS 816
Query: 279 PNVVTYTIIMC 289
PN +IMC
Sbjct: 817 PN-----LIMC 822
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 101/232 (43%), Gaps = 5/232 (2%)
Query: 77 NILLRRYKDDWKSALGL--FKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMR 134
NI+ KD+ LG F WAS + ES+ +++D+L D L++++
Sbjct: 61 NIITSVIKDEVNRQLGFRFFIWASRRERLRSR-ESFGLVIDMLSEDNGCDLYWQTLEELK 119
Query: 135 CEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEE-FV 193
G + ++ + G AV F ++ + + N++L + +EE F
Sbjct: 120 SGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFF 179
Query: 194 EQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTI 252
A +Y E LK + +PN +TF I + G K R +A +M G G P ++Y+ +
Sbjct: 180 MLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTIL 239
Query: 253 IQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
I C + +L EMQ P+ V + ++ K + EA +++
Sbjct: 240 ISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELL 291
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 84/197 (42%), Gaps = 1/197 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y +++ L + D R L +M+ G+ ++ F G+ +A +
Sbjct: 235 TYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLF 294
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRV 227
+ G + L+D L + QA ++Y LK++I P+ + I I G K ++
Sbjct: 295 EKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKI 354
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
E+A + M G P Y+ +I+ C + L EM + P+ T+TI+
Sbjct: 355 EDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTIL 414
Query: 288 MCALAKAEKFDEALQVI 304
+C++ + EA ++
Sbjct: 415 ICSMCRNGLVREAEEIF 431
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 77/190 (40%), Gaps = 40/190 (21%)
Query: 155 AGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIA-PNAHT 213
AG+ DA+++ + + G+ +T N ++ LC +E+ R + LE+ + + P+A T
Sbjct: 351 AGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACT 410
Query: 214 FNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQ 273
I I C+ V EA E++ GC P V +++ +I C + LL +M+
Sbjct: 411 HTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKME 470
Query: 274 A---------------------------------------QDCSPNVVTYTIIMCALAKA 294
SP++V+Y +++ +A
Sbjct: 471 VGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRA 530
Query: 295 EKFDEALQVI 304
D AL+++
Sbjct: 531 GDIDGALKLL 540
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 119/297 (40%), Gaps = 57/297 (19%)
Query: 55 EIIRSLCNDQACDAIHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMV 114
E++R D + +LI+ L R + + A L+ L N + Y +++
Sbjct: 289 ELLRLFEKDGFVLGLRGYSSLIDGLFRARR--YTQAFELYA-NMLKKNIKPDIILYTILI 345
Query: 115 DILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLE 174
L + ++ LL M +G V++ G G + ++ ++L LE
Sbjct: 346 QGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRG-------LLEEGRSLQLE 398
Query: 175 -KNTESM------NLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRR 226
TES +L+ ++C+ V +A +I+ E+ K +P+ TFN I G CK
Sbjct: 399 MSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGE 458
Query: 227 VEEAHWTIQEM------------------------------KGY---------GCRPCVI 247
++EA + +M K Y G P ++
Sbjct: 459 LKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIV 518
Query: 248 SYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
SY+ +I +C + +LL+ +Q + SP+ VTY ++ L + + +EA ++
Sbjct: 519 SYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 68/128 (53%), Gaps = 2/128 (1%)
Query: 180 MNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMK 238
L++D L ++ + Q ELK ++ +++ F + I + K+ E+A + MK
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 239 GYGCRPCVISYSTIIQCYCNEQNFSKV-YELLDEMQAQDCSPNVVTYTIIMCALAKAEKF 297
+ CRP V +Y+ I++ E+ F + + + +EM +CSPN+ T+ I+M L K +
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 298 DEALQVIE 305
+A ++ +
Sbjct: 215 SDAQKMFD 222
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 110/241 (45%), Gaps = 6/241 (2%)
Query: 71 LSPNLINILLRRY---KDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLR 127
LSP ++ +L R + AL FK++ S + +S++ + IL RM+ D+
Sbjct: 64 LSPEFVSEVLGRLFAAHSNGLKALEFFKYSLKSSKSSPTSDSFEKTLHILARMRYFDQAW 123
Query: 128 DLLDQMRCE-GSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEK--NTESMNLLL 184
L+ ++R + ++++ +++ ++ + G + + + F ++ K + N+LL
Sbjct: 124 ALMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILL 183
Query: 185 DTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRP 244
C E +++AR I+ +L P+ T NI + G+ + V EM G +P
Sbjct: 184 RAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKP 243
Query: 245 CVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
++Y I +C ++NF + L ++M D V T ++ A +A Q+
Sbjct: 244 NSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLF 303
Query: 305 E 305
+
Sbjct: 304 D 304
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 70/131 (53%), Gaps = 1/131 (0%)
Query: 176 NTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTI 234
T + N ++D CK++ V+ A+++ + + +P+ TF+ I+G+CK +RV+
Sbjct: 9 TTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 68
Query: 235 QEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKA 294
EM G ++Y+T+I +C + +LL+EM + +P+ +T+ ++ L
Sbjct: 69 CEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSK 128
Query: 295 EKFDEALQVIE 305
++ +A ++E
Sbjct: 129 KELRKAFAILE 139
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%)
Query: 203 LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNF 262
L+ I P T+N I G+CK RV++A + M GC P V+++ST+I YC +
Sbjct: 2 LRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRV 61
Query: 263 SKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
E+ EM + N VTYT ++ + D A
Sbjct: 62 DNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAA 99
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 138 SIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQAR 197
+ IT N++ + F + DA R+ D + + G + + + L++ CK + V+
Sbjct: 9 TTITYNSM---IDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 198 QIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCY 256
+I+ E+ ++ I N T+ IHG+C++ ++ A + EM G P I++ ++
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 257 CNEQNFSKVYELLDEMQ 273
C+++ K + +L+++Q
Sbjct: 126 CSKKELRKAFAILEDLQ 142
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 112/269 (41%), Gaps = 45/269 (16%)
Query: 70 HLSPNLINIL--------LRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILG--- 118
H+SP I + L + K + + A+ +F+ + + E+Y++M+++ G
Sbjct: 220 HVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMK-RDRCKPTTETYNLMINLYGKAS 278
Query: 119 --------------------------------RMKVMDKLRDLLDQMRCEGSIITLNTIA 146
R + +K ++ +Q++ +G +
Sbjct: 279 KSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYN 338
Query: 147 KVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ- 205
+M + AG A IF +Q +G E + S N+++D + A ++ E+K+
Sbjct: 339 ALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRL 398
Query: 206 HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKV 265
IAP + + + + K R V + ++EM G P ++++ Y F+K+
Sbjct: 399 GIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKM 458
Query: 266 YELLDEMQAQDCSPNVVTYTIIMCALAKA 294
++L EM+ C+ ++ TY I++ KA
Sbjct: 459 EKILAEMENGPCTADISTYNILINIYGKA 487
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 122/295 (41%), Gaps = 41/295 (13%)
Query: 49 KGSSEEEIIRSLCNDQACDAIHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPE 108
KG++EE I + D + N+++ Y KS + + + S+ Q P
Sbjct: 242 KGNTEEAI--DVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSH-QCKPN 298
Query: 109 --SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFD 166
+Y +V+ R + +K ++ +Q++ +G + +M + AG A IF
Sbjct: 299 ICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFS 358
Query: 167 DLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIR 225
+Q +G E + S N+++D + A ++ E+K+ IAP + + + + K R
Sbjct: 359 LMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKAR 418
Query: 226 RVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCS------- 278
V + ++EM G P ++++ Y F+K+ ++L EM+ C+
Sbjct: 419 DVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYN 478
Query: 279 ----------------------------PNVVTYTIIMCALAKAEKFDEALQVIE 305
P+VVT+T + A ++ + + + L+V E
Sbjct: 479 ILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFE 533
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 106/259 (40%), Gaps = 54/259 (20%)
Query: 63 DQACDAIHLSP-------NLINILLR-RYKDDWKSALGLFKWASLHSNFQHSPESYDMMV 114
D+ D + P +LIN+ ++ R W S + + +W S+FQ +++++
Sbjct: 103 DKVADVLGALPSTHASWDDLINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICFNLLI 162
Query: 115 DILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLE 174
D G+ +F Q+ +A ++ L
Sbjct: 163 DAYGQ-------------------------------KF----QYKEAESLYVQLLESRYV 187
Query: 175 KNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAP---NAHTFNIFIHGWCKIR-RVEE 229
++ LL+ C +E+A + +E++ H++P +N +I G K + EE
Sbjct: 188 PTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEE 247
Query: 230 AHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMC 289
A Q MK C+P +Y+ +I Y ++L EM++ C PN+ TYT ++
Sbjct: 248 AIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVN 307
Query: 290 ALA------KAEKFDEALQ 302
A A KAE+ E LQ
Sbjct: 308 AFAREGLCEKAEEIFEQLQ 326
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 100/217 (46%), Gaps = 6/217 (2%)
Query: 94 FKWASLHSNFQH---SPE--SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKV 148
+ A + S QH P+ SY++MVD GR + + ++M+ G T+ + +
Sbjct: 351 YGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLL 410
Query: 149 MRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHI- 207
+ + A I ++ G+E +T +N +L+ + + +I E++
Sbjct: 411 LSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPC 470
Query: 208 APNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYE 267
+ T+NI I+ + K +E E+K RP V+++++ I Y ++ + K E
Sbjct: 471 TADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLE 530
Query: 268 LLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+ +EM C+P+ T +++ A + E+ ++ V+
Sbjct: 531 VFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVL 567
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 110/247 (44%), Gaps = 16/247 (6%)
Query: 71 LSPNLI--NILLRRY--KDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKL 126
P++I N+L+ Y K +K A L+ L S + + ++Y +++ ++++
Sbjct: 151 FQPDVICFNLLIDAYGQKFQYKEAESLYVQL-LESRYVPTEDTYALLIKAYCMAGLIERA 209
Query: 127 RDLLDQM-------RCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTES 179
+L +M + G + I +M+R G +A+ +F ++ + TE+
Sbjct: 210 EVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKR---KGNTEEAIDVFQRMKRDRCKPTTET 266
Query: 180 MNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMK 238
NL+++ K + ++Y E++ H PN T+ ++ + + E+A ++++
Sbjct: 267 YNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQ 326
Query: 239 GYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFD 298
G P V Y+ +++ Y E+ MQ C P+ +Y I++ A +A
Sbjct: 327 EDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHS 386
Query: 299 EALQVIE 305
+A V E
Sbjct: 387 DAEAVFE 393
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 106/255 (41%), Gaps = 44/255 (17%)
Query: 91 LGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMR---CEGSIITLNTIAK 147
+ +FKW + N+ + Y+MM+ + R +D+ R L +M+ C+ T + +
Sbjct: 127 VNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALIN 186
Query: 148 VMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDT------------LCKE----- 190
R AGQW A+ + DD+ + + + N L++ +CK+
Sbjct: 187 AHGR---AGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNG 243
Query: 191 ------------EFVEQARQI-----YLELKQ--HIAPNAHTFNIFIHGWCKIRRVEEAH 231
+ RQ Y EL + + P+ TFNI I+ K+ + +A
Sbjct: 244 VGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQAL 303
Query: 232 WTIQEM--KGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMC 289
M K CRP V+++++I+ Y + + + M A+ PN+V+Y +M
Sbjct: 304 DLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMG 363
Query: 290 ALAKAEKFDEALQVI 304
A A AL V+
Sbjct: 364 AYAVHGMSGTALSVL 378
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 111/238 (46%), Gaps = 18/238 (7%)
Query: 71 LSPNLI--NILLRRYKDD--WKSALGLFKWASLHSNFQHSPES--YDMMVDILGRMKVMD 124
+ P+L+ NI+L YK + AL F+ L + P++ +++++ L ++
Sbjct: 244 VGPDLVTHNIVLSAYKSGRQYSKALSYFE---LMKGAKVRPDTTTFNIIIYCLSKLGQSS 300
Query: 125 KLRDLLDQMR-----CEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTES 179
+ DL + MR C ++T +I M + G+ + +F+ + GL+ N S
Sbjct: 301 QALDLFNSMREKRAECRPDVVTFTSI---MHLYSVKGEIENCRAVFEAMVAEGLKPNIVS 357
Query: 180 MNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMK 238
N L+ A + ++KQ+ I P+ ++ ++ + + R+ +A M+
Sbjct: 358 YNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMR 417
Query: 239 GYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEK 296
+P V++Y+ +I Y + ++ E+ +M+ PNVV+ ++ A ++++K
Sbjct: 418 KERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK 475
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 92/193 (47%), Gaps = 1/193 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+ ++D G + + ++ QM +G + ++ ++ + + + +
Sbjct: 427 TYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAA 486
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRV 227
Q+ G+ NT + N + + +E+A +Y + K+ + ++ TF I I G C++ +
Sbjct: 487 QSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKY 546
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
EA ++EM+ YS+++ Y + ++ + ++M+ C P+V+ YT +
Sbjct: 547 PEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSM 606
Query: 288 MCALAKAEKFDEA 300
+ A +EK+ +A
Sbjct: 607 LHAYNASEKWGKA 619
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/222 (18%), Positives = 97/222 (43%), Gaps = 9/222 (4%)
Query: 92 GLFKWAS------LHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTI 145
G ++WA L + S +Y+ +++ G + ++ +M G L T
Sbjct: 192 GQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTH 251
Query: 146 AKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ 205
V+ + Q++ A+ F+ ++ + +T + N+++ L K QA ++ +++
Sbjct: 252 NIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE 311
Query: 206 HIA---PNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNF 262
A P+ TF +H + +E + M G +P ++SY+ ++ Y
Sbjct: 312 KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMS 371
Query: 263 SKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+L +++ P+VV+YT ++ + ++ + +A +V
Sbjct: 372 GTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 413
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 104/222 (46%), Gaps = 7/222 (3%)
Query: 87 WKSALGLFKWASLHSNFQHSPESYDMMVDI---LGRMKVMDKLRDLLDQMRCEGSIITLN 143
W+ F W L +++ S Y +++ + +G++K+ ++ + ++ CE +
Sbjct: 168 WRQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACG 227
Query: 144 TIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL 203
T+ R+ G+ + + + +Q + +T N +L +L K+ F + ++LE+
Sbjct: 228 TMLCTYARW---GRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEM 284
Query: 204 -KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNF 262
++ + PN T+ + + + K EEA EMK G P ++YS++I ++
Sbjct: 285 VEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDW 344
Query: 263 SKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
K L ++M++Q P+ T ++ K E + +AL +
Sbjct: 345 EKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLF 386
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 71/164 (43%)
Query: 143 NTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE 202
+ + +V+ FV G + A I D + LGL E++ L+ ++ +++A+++YL
Sbjct: 636 SAVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLA 695
Query: 203 LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNF 262
+ P I + + +E+A+ E GC P ++ S ++ N
Sbjct: 696 AGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKH 755
Query: 263 SKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+ + ++ + V Y ++ A+ +A K A ++ ER
Sbjct: 756 REAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYER 799
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 112/269 (41%), Gaps = 45/269 (16%)
Query: 70 HLSPNLINIL--------LRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILG--- 118
H+SP I + L + K + + A+ +F+ + + E+Y++M+++ G
Sbjct: 242 HVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMK-RDRCKPTTETYNLMINLYGKAS 300
Query: 119 --------------------------------RMKVMDKLRDLLDQMRCEGSIITLNTIA 146
R + +K ++ +Q++ +G +
Sbjct: 301 KSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYN 360
Query: 147 KVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ- 205
+M + AG A IF +Q +G E + S N+++D + A ++ E+K+
Sbjct: 361 ALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRL 420
Query: 206 HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKV 265
IAP + + + + K R V + ++EM G P ++++ Y F+K+
Sbjct: 421 GIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKM 480
Query: 266 YELLDEMQAQDCSPNVVTYTIIMCALAKA 294
++L EM+ C+ ++ TY I++ KA
Sbjct: 481 EKILAEMENGPCTADISTYNILINIYGKA 509
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 122/295 (41%), Gaps = 41/295 (13%)
Query: 49 KGSSEEEIIRSLCNDQACDAIHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPE 108
KG++EE I + D + N+++ Y KS + + + S+ Q P
Sbjct: 264 KGNTEEAI--DVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSH-QCKPN 320
Query: 109 --SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFD 166
+Y +V+ R + +K ++ +Q++ +G + +M + AG A IF
Sbjct: 321 ICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFS 380
Query: 167 DLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIR 225
+Q +G E + S N+++D + A ++ E+K+ IAP + + + + K R
Sbjct: 381 LMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKAR 440
Query: 226 RVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCS------- 278
V + ++EM G P ++++ Y F+K+ ++L EM+ C+
Sbjct: 441 DVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYN 500
Query: 279 ----------------------------PNVVTYTIIMCALAKAEKFDEALQVIE 305
P+VVT+T + A ++ + + + L+V E
Sbjct: 501 ILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFE 555
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 106/259 (40%), Gaps = 54/259 (20%)
Query: 63 DQACDAIHLSP-------NLINILLR-RYKDDWKSALGLFKWASLHSNFQHSPESYDMMV 114
D+ D + P +LIN+ ++ R W S + + +W S+FQ +++++
Sbjct: 125 DKVADVLGALPSTHASWDDLINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICFNLLI 184
Query: 115 DILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLE 174
D G+ +F Q+ +A ++ L
Sbjct: 185 DAYGQ-------------------------------KF----QYKEAESLYVQLLESRYV 209
Query: 175 KNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAP---NAHTFNIFIHGWCKIR-RVEE 229
++ LL+ C +E+A + +E++ H++P +N +I G K + EE
Sbjct: 210 PTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEE 269
Query: 230 AHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMC 289
A Q MK C+P +Y+ +I Y ++L EM++ C PN+ TYT ++
Sbjct: 270 AIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVN 329
Query: 290 ALA------KAEKFDEALQ 302
A A KAE+ E LQ
Sbjct: 330 AFAREGLCEKAEEIFEQLQ 348
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 99/214 (46%), Gaps = 6/214 (2%)
Query: 97 ASLHSNFQH---SPE--SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRR 151
A + S QH P+ SY++MVD GR + + ++M+ G T+ + ++
Sbjct: 376 AEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSA 435
Query: 152 FVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHI-APN 210
+ A I ++ G+E +T +N +L+ + + +I E++ +
Sbjct: 436 YSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTAD 495
Query: 211 AHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLD 270
T+NI I+ + K +E E+K RP V+++++ I Y ++ + K E+ +
Sbjct: 496 ISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFE 555
Query: 271 EMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
EM C+P+ T +++ A + E+ ++ V+
Sbjct: 556 EMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVL 589
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 110/247 (44%), Gaps = 16/247 (6%)
Query: 71 LSPNLI--NILLRRY--KDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKL 126
P++I N+L+ Y K +K A L+ L S + + ++Y +++ ++++
Sbjct: 173 FQPDVICFNLLIDAYGQKFQYKEAESLYVQL-LESRYVPTEDTYALLIKAYCMAGLIERA 231
Query: 127 RDLLDQM-------RCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTES 179
+L +M + G + I +M+R G +A+ +F ++ + TE+
Sbjct: 232 EVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKR---KGNTEEAIDVFQRMKRDRCKPTTET 288
Query: 180 MNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMK 238
NL+++ K + ++Y E++ H PN T+ ++ + + E+A ++++
Sbjct: 289 YNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQ 348
Query: 239 GYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFD 298
G P V Y+ +++ Y E+ MQ C P+ +Y I++ A +A
Sbjct: 349 EDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHS 408
Query: 299 EALQVIE 305
+A V E
Sbjct: 409 DAEAVFE 415
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 81/163 (49%), Gaps = 1/163 (0%)
Query: 142 LNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYL 201
L T ++++ F +G + + I +++ G++ N+ S L++ E+ ++ ++
Sbjct: 187 LETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLA 246
Query: 202 ELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQ 260
+K + + T+NI I CK ++ +EA + M G +P ++YS +I +CNE
Sbjct: 247 MMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNED 306
Query: 261 NFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
+F + +L M + C P+ Y ++ L K F+ AL +
Sbjct: 307 DFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSL 349
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 2/153 (1%)
Query: 155 AGQWADAVRIFDDLQTL-GLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAH 212
A + +A R++ ++ + G+E + E+ N ++ C+ + I E+ ++ I PN+
Sbjct: 164 AKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSS 223
Query: 213 TFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEM 272
+F + I G+ + +E + MK G V +Y+ IQ C + + LLD M
Sbjct: 224 SFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGM 283
Query: 273 QAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+ PN VTY+ ++ + F+EA ++ +
Sbjct: 284 LSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFK 316
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 93/220 (42%), Gaps = 1/220 (0%)
Query: 86 DWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTI 145
D+K A ++ + E+Y+ M+ + ++ +M +G ++
Sbjct: 166 DYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSF 225
Query: 146 AKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LK 204
++ F + + ++ ++ G+ + N+ + +LCK + ++A+ + L
Sbjct: 226 GLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLS 285
Query: 205 QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSK 264
+ PN T++ IHG+C EEA + M GC+P Y T+I C +F
Sbjct: 286 AGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFET 345
Query: 265 VYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
L E ++ P+ ++ LAK K +EA ++I
Sbjct: 346 ALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELI 385
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 79/156 (50%), Gaps = 2/156 (1%)
Query: 152 FVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ--HIAP 209
+ A ++R+F DL+ + + +S+N LL + ++A+++Y+E+ + I P
Sbjct: 126 YAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEP 185
Query: 210 NAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELL 269
+ T+N I +C+ ++ + EM+ G +P S+ +I + E +V ++L
Sbjct: 186 DLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVL 245
Query: 270 DEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
M+ + + V TY I + +L K +K EA +++
Sbjct: 246 AMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLD 281
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 101/221 (45%), Gaps = 8/221 (3%)
Query: 87 WKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIA 146
W+ A+ +F+W ++ + Y++M+ ILG+ ++ L D+M +G +T
Sbjct: 167 WERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYG 226
Query: 147 KVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE---- 202
++ + G A+ + +G++ + + ++L K ++A + + +
Sbjct: 227 TLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCD 286
Query: 203 ---LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNE 259
H+ +++T+N I + K +++EA T + M G P ++++T+I Y N
Sbjct: 287 ENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNN 346
Query: 260 QNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
+V L+ M+ C+P+ TY I++ K + A
Sbjct: 347 GQLGEVTSLMKTMKLH-CAPDTRTYNILISLHTKNNDIERA 386
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 7/200 (3%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+ +V IL + K R L++MR G + V+ FV GQ A ++ ++
Sbjct: 542 TYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEM 601
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAP-NAHTFNIFIHGWCKIRRV 227
+E + +L++ V+QA +K+ P N+ +N I + K+ +
Sbjct: 602 VEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYL 661
Query: 228 EEAHWTIQEMKGYGCR----PCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVT 283
+EA +++ C P V + + +I Y K + D M+ Q N T
Sbjct: 662 DEAEAIYRKLL-QSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMK-QRGEANEFT 719
Query: 284 YTIIMCALAKAEKFDEALQV 303
+ +++C K +F+EA Q+
Sbjct: 720 FAMMLCMYKKNGRFEEATQI 739
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 71/169 (42%), Gaps = 3/169 (1%)
Query: 138 SIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQAR 197
S T NT+ + + +GQ +A F + G+ T + N ++ + +
Sbjct: 297 SSYTYNTM---IDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVT 353
Query: 198 QIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYC 257
+ +K H AP+ T+NI I K +E A +EMK G +P +SY T++ +
Sbjct: 354 SLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFS 413
Query: 258 NEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+ L+ EM + + T + + +AE +++ +R
Sbjct: 414 IRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKR 462
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%)
Query: 121 KVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAV-RIFDDLQTLGLEKNTES 179
+ MDK+ D + C I TL AG+ A V IF+ + G++ + +
Sbjct: 297 EAMDKINVYPDNVTCAILITTLRK----------AGRSAKEVWEIFEKMSEKGVKWSQDV 346
Query: 180 MNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMK 238
L+ + C E E+A I E+ K+ I N +N + + K +EE EM+
Sbjct: 347 FGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMR 406
Query: 239 GYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFD 298
G +P +Y+ ++ Y V LL EM+ PNV +YT ++ A + +K
Sbjct: 407 DKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMS 466
Query: 299 E 299
+
Sbjct: 467 D 467
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 93/197 (47%), Gaps = 2/197 (1%)
Query: 110 YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQ 169
Y+ ++D + ++++ L +MR +G + T +M + Q + +++
Sbjct: 382 YNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREME 441
Query: 170 TLGLEKNTESMNLLLDTLCK-EEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRV 227
LGLE N +S L+ + ++ + A +L +K+ + P++H++ IH +
Sbjct: 442 DLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWH 501
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
E+A+ + +EM G +P V +Y++++ + + K+ E+ M + +TY +
Sbjct: 502 EKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTL 561
Query: 288 MCALAKAEKFDEALQVI 304
+ AK + EA V+
Sbjct: 562 LDGFAKQGLYIEARDVV 578
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 181 NLLLDTLCKEEFVEQARQIYLELKQ------HIAPNAHTFNIFIHGWCKIRRVEEAHWTI 234
N +L+ L + ++A +++ +K+ H+A N TFN+ ++G+C + EEA
Sbjct: 314 NYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVF 373
Query: 235 QEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKA 294
++M + C P +S++ ++ C+ + ++ +L EM+ ++ P+ TY ++M K
Sbjct: 374 RQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKE 433
Query: 295 EKFDEA 300
K DE
Sbjct: 434 GKIDEG 439
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 72/154 (46%), Gaps = 29/154 (18%)
Query: 164 IFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGWC 222
+ D + LG+E L+ C+ V +AR+ + + + + I P+ T+ I I+ +C
Sbjct: 587 LLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYC 646
Query: 223 KIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQC--------------------------- 255
++ ++A+ ++MK +P V++YS ++
Sbjct: 647 RLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMIN 706
Query: 256 -YCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
YC+ + KVY L +M+ ++ P+VVTYT+++
Sbjct: 707 RYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLL 740
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Query: 187 LCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPC 245
LC E +E A + L++++H I P+ + ++ I G K + +A +M R
Sbjct: 301 LCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRIN 360
Query: 246 VISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+ S+I+QCYC NFS+ Y+L E + + S + V Y + AL K K +EA+++
Sbjct: 361 CVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELF 419
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 111/267 (41%), Gaps = 27/267 (10%)
Query: 37 MRSVDILTSKVAKGSSEEEIIRSLCNDQACDAIHLSPNLINILLRRYKDDWKSALGLFKW 96
+R +IL K G + +++R LC + R +D L + K
Sbjct: 278 LRDANILVDKSDLGIAYRKVVRGLCYEM-----------------RIEDAESVVLDMEKH 320
Query: 97 ASLHSNFQHSPESYDMMVDILGRMKVMD--KLRDLLDQMRCEGSIITLNTIAKVMRRFVG 154
P+ Y I G K M+ K D+ ++M + I ++ +++ +
Sbjct: 321 GI-------DPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQ 373
Query: 155 AGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHT 213
G +++A +F + + + + N+ D L K VE+A +++ E+ + IAP+
Sbjct: 374 MGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVIN 433
Query: 214 FNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQ 273
+ I G C + +A + EM G G P ++ Y+ + + +E L M+
Sbjct: 434 YTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMME 493
Query: 274 AQDCSPNVVTYTIIMCALAKAEKFDEA 300
+ P VT+ +++ L A + D+A
Sbjct: 494 NRGVKPTYVTHNMVIEGLIDAGELDKA 520
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 72/146 (49%), Gaps = 1/146 (0%)
Query: 161 AVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIH 219
AV +F+ + N ++ +L C+ +A ++ E ++ +I+ + +N+
Sbjct: 345 AVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFD 404
Query: 220 GWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSP 279
K+ +VEEA +EM G G P VI+Y+T+I C + S ++L+ EM +P
Sbjct: 405 ALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTP 464
Query: 280 NVVTYTIIMCALAKAEKFDEALQVIE 305
++V Y ++ LA EA + ++
Sbjct: 465 DIVIYNVLAGGLATNGLAQEAFETLK 490
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
Query: 179 SMNLLLDTLCKEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEM 237
+ LL+++LCKE +AR + L L++ A +NI++ G C + E + M
Sbjct: 379 TYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSM 438
Query: 238 KGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEM-QAQDCSPNVVTYTIIMCALAKAEK 296
CRP + +T+I C ++LD+M + C+P+ VT +MC L +
Sbjct: 439 LQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGR 498
Query: 297 FDEALQVIER 306
+EAL V+ R
Sbjct: 499 AEEALDVLNR 508
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 125/307 (40%), Gaps = 58/307 (18%)
Query: 56 IIRSLCNDQACDAIH------LSPNLI------NILLRR--YKDDWKSALGLF-KWASLH 100
+I SLC+ D H L+ I N+++ R Y S LG+ +
Sbjct: 96 VIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFK 155
Query: 101 SNFQHSPESYDMMVDILGRM-KVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWA 159
F S +Y+ +++ L + +V+D + + D MR G + + T ++ + +
Sbjct: 156 KEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFD-MRNRGHLPDVVTFTTLIGGYCEIRELE 214
Query: 160 DAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHT------ 213
A ++FD+++ G+ N+ ++++L+ K VE R++ EL +++ T
Sbjct: 215 VAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAA 274
Query: 214 -------------FN-IF---------------------IHGWCKIRRVEEAHWTIQEMK 238
FN IF I C+ RR A + MK
Sbjct: 275 FANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMK 334
Query: 239 GYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFD 298
G +P SY+ II C + + Y+LL+E + P+ TY ++M +L K
Sbjct: 335 SKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTG 394
Query: 299 EALQVIE 305
+A V+E
Sbjct: 395 KARNVLE 401
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 77/165 (46%), Gaps = 3/165 (1%)
Query: 144 TIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLC-KEEFVEQARQIY-- 200
++ V+ AG++ +A R F G + + N+++ L V I+
Sbjct: 92 NLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRL 151
Query: 201 LELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQ 260
+ K+ P+ +N ++ C I RV +AH + +M+ G P V++++T+I YC +
Sbjct: 152 IGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIR 211
Query: 261 NFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+++ DEM+ PN +T ++++ K + ++++
Sbjct: 212 ELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMK 256
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 85/172 (49%), Gaps = 12/172 (6%)
Query: 121 KVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESM 180
+ +D L ++ + + + ++ N V+R + +A+ +F L+ + ++ +
Sbjct: 501 EALDVLNRVMPENKIKPGVVAYNA---VIRGLFKLHKGDEAMSVFGQLEKASVTADSTTY 557
Query: 181 NLLLDTLCKEEFVEQARQIYLELKQHIAP----NAHTFNIFIHGWCKIRRVEEAHWTIQE 236
+++D LC V+ A++ + ++ I P +A + F+ G C+ + +A + +
Sbjct: 558 AIIIDGLCVTNKVDMAKKFWDDV---IWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYD 614
Query: 237 MKGYGCRPCVISYSTIIQCYCNEQNFSK-VYELLDEMQAQDCSPNVVTYTII 287
+ G P V+ Y+T+I C+ + Y++L+EM+ +P+ VT+ I+
Sbjct: 615 LADSGAIPNVVCYNTVI-AECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 3/131 (2%)
Query: 177 TESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQ 235
T N+ L LC + + + + + Q P+ +T N I+G CK+ RV++A +
Sbjct: 412 TRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLD 471
Query: 236 EM-KGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQD-CSPNVVTYTIIMCALAK 293
+M G C P ++ +T++ + + ++L+ + ++ P VV Y ++ L K
Sbjct: 472 DMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFK 531
Query: 294 AEKFDEALQVI 304
K DEA+ V
Sbjct: 532 LHKGDEAMSVF 542
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 83/172 (48%), Gaps = 2/172 (1%)
Query: 74 NLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQM 133
++IN +L+ + K+ L F WA+ F+H +Y M+DI G + + + M
Sbjct: 90 HIINRVLKAHPPMQKAWL-FFNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLM 148
Query: 134 RCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFV 193
+ +G +I T ++ +G A+R++++++ G E S + L + V
Sbjct: 149 KEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRV 208
Query: 194 EQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRP 244
E+A ++Y E L+ ++PN HT+ + + + EEA +M+ G +P
Sbjct: 209 EEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQP 260
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 1/137 (0%)
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRV 227
Q G + + + +LD + ++ ++ +K+ + + T+ IH V
Sbjct: 114 QIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDV 173
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
+ A +EM+ GC P V+SY+ ++ + + E+ EM SPN TYT++
Sbjct: 174 DGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVL 233
Query: 288 MCALAKAEKFDEALQVI 304
M L K +EAL +
Sbjct: 234 MEYLVATGKCEEALDIF 250
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 104/263 (39%), Gaps = 37/263 (14%)
Query: 80 LRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRM-KVMDKLRDLLDQMRCEGS 138
LR D K+ L F W + +N+ H ++D MV ++ ++ + + ++++++ G
Sbjct: 46 LRESPADLKT-LNFFFWCAKQNNYFHDDRAFDHMVGVVEKLTREYYSIDRIIERLKISGC 104
Query: 139 IITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQ 198
I ++ F + A+ ++ + + G NT +MN+++D K V A +
Sbjct: 105 EIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALE 164
Query: 199 IY-------------------------------LELKQHIA----PNAHTFNIFIHGWCK 223
I+ + LK+ I PN F + C+
Sbjct: 165 IFEGIRFRNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCR 224
Query: 224 IRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVT 283
V EA + M G V +S ++ + K +L ++M CSPN+VT
Sbjct: 225 TGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVT 284
Query: 284 YTIIMCALAKAEKFDEALQVIER 306
YT ++ DEA V+ +
Sbjct: 285 YTSLIKGFVDLGMVDEAFTVLSK 307
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/210 (18%), Positives = 100/210 (47%), Gaps = 10/210 (4%)
Query: 101 SNFQHSPES--YDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQW 158
S+F P + +MM+D+ ++ V++ ++ + +R + + F G
Sbjct: 135 SSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFR----NFFSFDIALSHFCSRGGR 190
Query: 159 ADAVRIFDDLQTL---GLEKNTESMNLLLDTLCKEEFVEQARQIY-LELKQHIAPNAHTF 214
D V + L+ + G N E +L C+ V +A Q+ L + I+ + + +
Sbjct: 191 GDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVW 250
Query: 215 NIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQA 274
++ + G+ + ++A +M GC P +++Y+++I+ + + + + +L ++Q+
Sbjct: 251 SMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQS 310
Query: 275 QDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+ +P++V +++ + +F+EA +V
Sbjct: 311 EGLAPDIVLCNLMIHTYTRLGRFEEARKVF 340
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 84/195 (43%), Gaps = 4/195 (2%)
Query: 101 SNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWAD 160
S S + M+V R K DL ++M G L T +++ FV G +
Sbjct: 241 SGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDE 300
Query: 161 AVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIH 219
A + +Q+ GL + NL++ T + E+AR+++ L K+ + P+ +TF +
Sbjct: 301 AFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILS 360
Query: 220 GWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSP 279
C + + + G G +++ + + C+ S ++L M +D +
Sbjct: 361 SLCLSGKFD---LVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFAL 417
Query: 280 NVVTYTIIMCALAKA 294
+ TYT+ + AL +
Sbjct: 418 DCYTYTVYLSALCRG 432
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 132/301 (43%), Gaps = 15/301 (4%)
Query: 11 CSLFSRLAIASCGARGFRHQEQCQSLMRSVDILTSKVAKGSSEEEIIRSLCNDQACDAIH 70
C + S +A +RG+ +S SV K+ + E+I+ S+ C+
Sbjct: 36 CGILSLKFLAYLVSRGYTPH---RSSFNSVVSFVCKLGQVKFAEDIVHSMPR-FGCEPDV 91
Query: 71 LSPN-LINILLRRYKDDWKSALGLFKWASLHSNFQHSPE--SYDMMVDILGRMKVMDKLR 127
+S N LI+ R D +SA + + F P+ S++ + + +MK++D++
Sbjct: 92 ISYNSLIDGHCR--NGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF 149
Query: 128 DLLDQMR--CEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLD 185
+ M C +++T +T + F +G+ A++ F ++ L N + L+D
Sbjct: 150 VYMGVMLKCCSPNVVTYSTW---IDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLID 206
Query: 186 TLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRP 244
CK +E A +Y E+++ ++ N T+ I G+CK ++ A M P
Sbjct: 207 GYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEP 266
Query: 245 CVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+ Y+TII + + + L +M Q ++ Y +I+ L K EA +++
Sbjct: 267 NSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIV 326
Query: 305 E 305
E
Sbjct: 327 E 327
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 101/229 (44%), Gaps = 17/229 (7%)
Query: 91 LGLFKWAS--LHS--NFQHSPE--SYDMMVDILGRMKVMDKLRDLLDQMR------CEGS 138
LG K+A +HS F P+ SY+ ++D R + +L+ +R C+
Sbjct: 69 LGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPD 128
Query: 139 IITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQ 198
I++ N++ + + D V ++ + N + + +DT CK ++ A +
Sbjct: 129 IVSFNSLFNGFSKM----KMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALK 184
Query: 199 IYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYC 257
+ +K+ ++PN TF I G+CK +E A +EM+ V++Y+ +I +C
Sbjct: 185 SFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFC 244
Query: 258 NEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+ + E+ M PN + YT I+ + D A++ + +
Sbjct: 245 KKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAK 293
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 93/198 (46%), Gaps = 1/198 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
SY+ ++D + MD ++M G + T +M + A+ + D++
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRV 227
+ G++ + + L+D CK +E A ++ EL ++ + P+ +N I G+ + +
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNM 705
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
A ++M G R + +Y+T+I + N EL EMQA P+ + YT+I
Sbjct: 706 VAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVI 765
Query: 288 MCALAKAEKFDEALQVIE 305
+ L+K +F + +++ E
Sbjct: 766 VNGLSKKGQFVKVVKMFE 783
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 147/313 (46%), Gaps = 20/313 (6%)
Query: 1 MQSLYSRKCCCSLFSRLAIASCGARGFRHQEQC-QSLMRSVDILTSKVAKGSSEEEIIRS 59
+ SL + CC +L LA+A+ R + ++ C S ++ + V +G+ ++ I
Sbjct: 270 LYSLAVQACCKTL--DLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAI--R 325
Query: 60 LCNDQACDAIHLSPNLINILLRRY--KDDWKSALGLFKWASLHSNFQHSPES--YDMMVD 115
L ++ D I ++ L+ + +D SAL LF SP S + ++++
Sbjct: 326 LKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEG---PSPNSVTFSVLIE 382
Query: 116 ILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEK 175
+ M+K + +M G ++ + +++ ++ + +A+++FD+ GL
Sbjct: 383 WFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-A 441
Query: 176 NTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTI 234
N N +L LCK+ ++A ++ +++ + I PN ++N + G C+ + ++ A
Sbjct: 442 NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVF 501
Query: 235 QEMKGYGCRPCVISYSTIIQ-CYCN--EQNFSKVYELLDEMQAQDCSPNVVTYTIIMCAL 291
+ G +P +YS +I C+ N EQN E+++ M + + N V Y I+ L
Sbjct: 502 SNILEKGLKPNNYTYSILIDGCFRNHDEQN---ALEVVNHMTSSNIEVNGVVYQTIINGL 558
Query: 292 AKAEKFDEALQVI 304
K + +A +++
Sbjct: 559 CKVGQTSKARELL 571
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 85/196 (43%), Gaps = 1/196 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y +++ L + MD+ ++ D+M+ +G + + ++ F A +F +L
Sbjct: 621 TYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSEL 680
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRV 227
GL + N L+ + A +Y + LK + + T+ I G K +
Sbjct: 681 LEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNL 740
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
A EM+ G P I Y+ I+ + F KV ++ +EM+ + +PNV+ Y +
Sbjct: 741 ILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAV 800
Query: 288 MCALAKAEKFDEALQV 303
+ + DEA ++
Sbjct: 801 IAGHYREGNLDEAFRL 816
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 12/187 (6%)
Query: 124 DKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLL 183
D+ +LL +M G + + VM A +F ++ GL+ N + ++L
Sbjct: 460 DEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSIL 519
Query: 184 LDTLCKEEFVEQARQIYLELKQH-----IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEM- 237
+D C F Q LE+ H I N + I+G CK+ + +A + M
Sbjct: 520 IDG-C---FRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMI 575
Query: 238 -KGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEK 296
+ C C +SY++II + E +EM SPNV+TYT +M L K +
Sbjct: 576 EEKRLCVSC-MSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNR 634
Query: 297 FDEALQV 303
D+AL++
Sbjct: 635 MDQALEM 641
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 80/183 (43%), Gaps = 1/183 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y ++D + M+ L ++ EG + ++ F G A+ ++ +
Sbjct: 656 AYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKM 715
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRV 227
GL + + L+D L K+ + A ++Y E++ + P+ + + ++G K +
Sbjct: 716 LKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQF 775
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
+ +EMK P V+ Y+ +I + E N + + L DEM + P+ T+ I+
Sbjct: 776 VKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDIL 835
Query: 288 MCA 290
+
Sbjct: 836 VSG 838
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 1/129 (0%)
Query: 179 SMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEM 237
S N ++D KE ++ A Y E+ I+PN T+ ++G CK R+++A EM
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 238 KGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKF 297
K G + + +Y +I +C N L E+ + +P+ Y ++
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNM 705
Query: 298 DEALQVIER 306
AL + ++
Sbjct: 706 VAALDLYKK 714
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/143 (20%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Query: 160 DAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL--KQHIAPNAHTFNIF 217
+A+ + + + + +E N +++ LCK +AR++ + ++ + + ++N
Sbjct: 531 NALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSI 590
Query: 218 IHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDC 277
I G+ K ++ A +EM G G P VI+Y++++ C + E+ DEM+ +
Sbjct: 591 IDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGV 650
Query: 278 SPNVVTYTIIMCALAKAEKFDEA 300
++ Y ++ K + A
Sbjct: 651 KLDIPAYGALIDGFCKRSNMESA 673
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/206 (18%), Positives = 92/206 (44%), Gaps = 2/206 (0%)
Query: 103 FQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAV 162
F+ + +++ +++ + + D D+++QM I + + + V +A
Sbjct: 159 FEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAK 218
Query: 163 RIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGW 221
++ + +G++ + + LL+ +EE +A ++ +++ P++ +++ +
Sbjct: 219 ELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQAC 278
Query: 222 CKIRRVEEAHWTIQEMKGYG-CRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPN 280
CK + A+ ++EMK C P +Y+++I + N L DEM + S N
Sbjct: 279 CKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMN 338
Query: 281 VVTYTIIMCALAKAEKFDEALQVIER 306
VV T ++ K AL + ++
Sbjct: 339 VVAATSLITGHCKNNDLVSALVLFDK 364
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 95/202 (47%), Gaps = 8/202 (3%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMR---CEGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
++ ++ + G D +R +L +M+ + +++ NT+ + M R AG+ A +F
Sbjct: 293 AFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGR---AGKPGLARSLF 349
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAP-NAHTFNIFIHGWCKI 224
+++ GL N +++ L+ K + A Q++ E+K P + +N ++ I
Sbjct: 350 NEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADI 409
Query: 225 RRVEEAHWTIQEMK-GYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVT 283
EEA +MK CRP SY+ ++ Y + K EL +EM NV+
Sbjct: 410 GLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMG 469
Query: 284 YTIIMCALAKAEKFDEALQVIE 305
T ++ L KA++ D+ + V +
Sbjct: 470 CTCLVQCLGKAKRIDDVVYVFD 491
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 99/244 (40%), Gaps = 8/244 (3%)
Query: 67 DAIHLSPNLINILL-RRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDK 125
D I PN N LL +W+ F W S F Y++ + L +
Sbjct: 145 DEIPHPPNRDNALLVLNSLREWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQL 204
Query: 126 LRDLLDQMRCEG---SIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNL 182
+ ++ +M +G IT +TI +R + A+ F+ + GL + + +
Sbjct: 205 IEEMALEMVKDGVELDNITYSTIITCAKR---CNLYNKAIEWFERMYKTGLMPDEVTYSA 261
Query: 183 LLDTLCKEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYG 241
+LD K VE+ +Y + P+A F++ + + + + +QEMK
Sbjct: 262 ILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMD 321
Query: 242 CRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEAL 301
+P V+ Y+T+++ L +EM +PN T T ++ KA +AL
Sbjct: 322 VKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDAL 381
Query: 302 QVIE 305
Q+ E
Sbjct: 382 QLWE 385
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 91/192 (47%), Gaps = 1/192 (0%)
Query: 107 PESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFD 166
P SY+ ++ L + +++ L L++ ++ + ++T V+ A I D
Sbjct: 512 PFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIID 571
Query: 167 DLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIR 225
++ LGL + ++ +L K+ V +A + + + L+ I P+ + I I+ + +
Sbjct: 572 AMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNG 631
Query: 226 RVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYT 285
R++EA+ ++E+ + RP +Y+ +I + K + LD+M SPNVV YT
Sbjct: 632 RIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYT 691
Query: 286 IIMCALAKAEKF 297
++ K F
Sbjct: 692 ALIGHFLKKGDF 703
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 2/157 (1%)
Query: 152 FVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPN 210
F G A+A +FD ++ G + L+ CK+ + A ++YL + ++ +
Sbjct: 247 FCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELD 306
Query: 211 AHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYEL-L 269
FN IHG+ K+ +++ +M G + V +Y +I YC E N L +
Sbjct: 307 PCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFV 366
Query: 270 DEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+ ++D S NV YT ++ K D+A+ ++ R
Sbjct: 367 NNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMR 403
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 85/194 (43%), Gaps = 3/194 (1%)
Query: 113 MVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLG 172
++D LG ++V K+ LL ++ + + + +A V + A+ + + LG
Sbjct: 450 VIDDLGNIEV--KVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLG 507
Query: 173 LEKNTESMNLLLDTLCKEEFVEQ-ARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAH 231
S N ++ L +E +E A + + + P+ T+ I ++ CK + A
Sbjct: 508 CTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAF 567
Query: 232 WTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCAL 291
I M+ G RP V YS+II + + E +M P+ + Y I++
Sbjct: 568 AIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTY 627
Query: 292 AKAEKFDEALQVIE 305
A+ + DEA +++E
Sbjct: 628 ARNGRIDEANELVE 641
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/197 (19%), Positives = 89/197 (45%), Gaps = 18/197 (9%)
Query: 104 QHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVR 163
+ +S+ M +++G++K + ++ + +IIT + AG+ +A
Sbjct: 772 NYGSKSFAM--EVIGKVK-----KSIIPNLYLHNTIIT---------GYCAAGRLDEAYN 815
Query: 164 IFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCK 223
+ +Q G+ N + +L+ + + +E A ++ + P+ ++ + G C
Sbjct: 816 HLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE--GTNCEPDQVMYSTLLKGLCD 873
Query: 224 IRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVT 283
+R +A + EM+ G P SY ++QC C + + +++ +M A D P +
Sbjct: 874 FKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSIN 933
Query: 284 YTIIMCALAKAEKFDEA 300
+T ++ L + +K EA
Sbjct: 934 HTWLIYILCEEKKLREA 950
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 67/148 (45%), Gaps = 1/148 (0%)
Query: 160 DAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFI 218
D + + +Q L + ++ ++++ LCK+ + A I +++ + P ++ I
Sbjct: 530 DLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSII 589
Query: 219 HGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCS 278
K RV EA T +M G +P I+Y +I Y + EL++E+
Sbjct: 590 GSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLR 649
Query: 279 PNVVTYTIIMCALAKAEKFDEALQVIER 306
P+ TYT+++ K ++ Q +++
Sbjct: 650 PSSFTYTVLISGFVKMGMMEKGCQYLDK 677
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 115/264 (43%), Gaps = 39/264 (14%)
Query: 80 LRRYKDDWKSALGLFKWASLHSNFQHSPE-SYDMMVDILGRMKVMDKLRDLLDQMRCEGS 138
LR+ +D K AL ++K S +S S + ++ V L + + + L++ +
Sbjct: 40 LRKVQDPDK-ALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSDIEALIESHKNNPK 98
Query: 139 IITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQ 198
I T ++ ++R + A + A+++F+++ LG + S N LL + E+ Q
Sbjct: 99 IKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQ 158
Query: 199 IYLELKQ---HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTII-Q 254
++ E Q +I P+ ++ + I +C + E+A +++M+ G +I+++TI+
Sbjct: 159 LFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGS 218
Query: 255 CYCN---------------------------------EQNFSKVYELLDEMQAQDCSPNV 281
Y N +++ +V EL++EM + P+
Sbjct: 219 LYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAKESPERVKELMEEMSSVGLKPDT 278
Query: 282 VTYTIIMCALAKAEKFDEALQVIE 305
V+Y +M A EA +V E
Sbjct: 279 VSYNYLMTAYCVKGMMSEAKKVYE 302
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 89/191 (46%), Gaps = 14/191 (7%)
Query: 122 VMDKLRDLLDQMRCEGSIITLNTIAKVM--RRFVGAGQWADAVRIFDDLQTLGLEKNTES 179
+ +++ L D+ + IT + I+ M + + +G+ A+ I D++ G+E +
Sbjct: 152 LFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIA 211
Query: 180 MNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHT-FNIFIHGWCKIRRVEEAHWTIQEMK 238
+L +L K V++A +++E+ +T +N+ + K E ++EM
Sbjct: 212 FTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAK-ESPERVKELMEEMS 270
Query: 239 GYGCRPCVISYSTIIQCYCNEQNFS---KVYELLDEMQAQDCSPNVVTYTIIMCALAKAE 295
G +P +SY+ ++ YC + S KVYE L++ PN T+ ++ L
Sbjct: 271 SVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLEQ-------PNAATFRTLIFHLCING 323
Query: 296 KFDEALQVIER 306
+D+ L V ++
Sbjct: 324 LYDQGLTVFKK 334
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 14/206 (6%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRC---EGSIITLNTIAKVMRRFVGAGQWADAVRIF 165
+Y +++D + K D+++QM E + + NTI + GQ + A +
Sbjct: 521 TYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTI---INGLCKVGQTSKAKEM- 576
Query: 166 DDLQTLGLEKNTE----SMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHG 220
LQ L EK S N ++D K + A + Y E+ ++ +PN TF I+G
Sbjct: 577 --LQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLING 634
Query: 221 WCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPN 280
+CK R++ A EMK + + +Y +I +C + + Y L E+ PN
Sbjct: 635 FCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPN 694
Query: 281 VVTYTIIMCALAKAEKFDEALQVIER 306
V Y ++ K D A+ + ++
Sbjct: 695 VSVYNSLISGFRNLGKMDAAIDLYKK 720
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 91/192 (47%), Gaps = 2/192 (1%)
Query: 117 LGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKN 176
L R ++D+ +++ ++M G T +MR + + +AV+IF + + G E +
Sbjct: 214 LVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPD 273
Query: 177 TESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNA--HTFNIFIHGWCKIRRVEEAHWTI 234
+L + CK + A + E++ + A T+ I + K +EEA +
Sbjct: 274 GLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVM 333
Query: 235 QEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKA 294
EM G+G VI+ ++++ YC K +L + M+ + +P+ V +++++ K
Sbjct: 334 DEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKN 393
Query: 295 EKFDEALQVIER 306
+ ++A++ R
Sbjct: 394 MEMEKAIEFYMR 405
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/303 (19%), Positives = 123/303 (40%), Gaps = 51/303 (16%)
Query: 39 SVDILTSKVAKGSSEEEIIRSLCNDQACDAIHLSPNLINILLRRYKDDWKSALGLFKWAS 98
+V I +++G+ + ++ SL AC +P+L+ AL L +
Sbjct: 258 AVKIFRRVMSRGAEPDGLLFSLAVQAACK----TPDLV------------MALDLLREMR 301
Query: 99 LHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQW 158
S E+Y ++ + M++ ++D+M G +++ ++ + +
Sbjct: 302 GKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNEL 361
Query: 159 ADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNA---HT- 213
A+ +F+ ++ GL + +++++ CK +E+A + Y+ +K IAP++ HT
Sbjct: 362 GKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTM 421
Query: 214 ----------------FNIFIHGW--------------CKIRRVEEAHWTIQEMKGYGCR 243
FN W CK +V+ A ++ M+ G
Sbjct: 422 IQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIE 481
Query: 244 PCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
P V+ Y+ ++ +C +N + EM + PN TY+I++ K + A V
Sbjct: 482 PNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDV 541
Query: 304 IER 306
I +
Sbjct: 542 INQ 544
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/198 (18%), Positives = 95/198 (47%), Gaps = 1/198 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
SY+ ++D ++ D + +M G + T ++ F + + A+ + ++
Sbjct: 592 SYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEM 651
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRV 227
+++ L+ + + L+D CK+ ++ A ++ EL + + PN +N I G+ + ++
Sbjct: 652 KSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKM 711
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
+ A ++M G + +Y+T+I + N + +L E+ P+ + + ++
Sbjct: 712 DAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVL 771
Query: 288 MCALAKAEKFDEALQVIE 305
+ L+K +F +A +++E
Sbjct: 772 VNGLSKKGQFLKASKMLE 789
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 77/194 (39%), Gaps = 37/194 (19%)
Query: 147 KVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQ 205
K+ F G+ A ++ G+E N N ++ C+ + ++ AR I+ E L++
Sbjct: 454 KIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEK 513
Query: 206 HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKV 265
+ PN T++I I G+ K + + A I +M + Y+TII C SK
Sbjct: 514 GLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKA 573
Query: 266 YELLD------------------------------------EMQAQDCSPNVVTYTIIMC 289
E+L EM SPNVVT+T ++
Sbjct: 574 KEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLIN 633
Query: 290 ALAKAEKFDEALQV 303
K+ + D AL++
Sbjct: 634 GFCKSNRMDLALEM 647
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 74/165 (44%), Gaps = 1/165 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y ++D + M L ++ G + ++ ++ F G+ A+ ++ +
Sbjct: 662 AYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKM 721
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRV 227
G+ + + ++D L K+ + A +Y EL I P+ + ++G K +
Sbjct: 722 VNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQF 781
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEM 272
+A ++EMK P V+ YST+I + E N ++ + L DEM
Sbjct: 782 LKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEM 826
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 108/241 (44%), Gaps = 16/241 (6%)
Query: 74 NLINILLRRY-KDDW-KSALGLF----KWASLHSNFQHSPESYDMMVDILGRMKVMDKLR 127
++ N+++R + + +W A GLF KW+ + E+YD +++ GR
Sbjct: 12 DIYNMMIRLHARHNWVDQARGLFFEMQKWSC-----KPDAETYDALINAHGRAGQWRWAM 66
Query: 128 DLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTL 187
+L+D M + +T ++ +G W +A+ + + G+ + + N++L
Sbjct: 67 NLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAY 126
Query: 188 CKEEFVEQARQIYLELKQ--HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEM--KGYGCR 243
+A Y EL + + P+ TFNI I+ K+ + +A M K CR
Sbjct: 127 KSGRQYSKALS-YFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECR 185
Query: 244 PCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
P V+++++I+ Y + + + M A+ PN+V+Y +M A A AL V
Sbjct: 186 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSV 245
Query: 304 I 304
+
Sbjct: 246 L 246
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 111/238 (46%), Gaps = 18/238 (7%)
Query: 71 LSPNLI--NILLRRYKDD--WKSALGLFKWASLHSNFQHSPES--YDMMVDILGRMKVMD 124
+ P+L+ NI+L YK + AL F+ L + P++ +++++ L ++
Sbjct: 112 VGPDLVTHNIVLSAYKSGRQYSKALSYFE---LMKGAKVRPDTTTFNIIIYCLSKLGQSS 168
Query: 125 KLRDLLDQMR-----CEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTES 179
+ DL + MR C ++T +I M + G+ + +F+ + GL+ N S
Sbjct: 169 QALDLFNSMREKRAECRPDVVTFTSI---MHLYSVKGEIENCRAVFEAMVAEGLKPNIVS 225
Query: 180 MNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMK 238
N L+ A + ++KQ+ I P+ ++ ++ + + R+ +A M+
Sbjct: 226 YNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMR 285
Query: 239 GYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEK 296
+P V++Y+ +I Y + ++ E+ +M+ PNVV+ ++ A ++++K
Sbjct: 286 KERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK 343
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 92/193 (47%), Gaps = 1/193 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+ ++D G + + ++ QM +G + ++ ++ + + + +
Sbjct: 295 TYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAA 354
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRV 227
Q+ G+ NT + N + + +E+A +Y + K+ + ++ TF I I G C++ +
Sbjct: 355 QSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKY 414
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
EA ++EM+ YS+++ Y + ++ + ++M+ C P+V+ YT +
Sbjct: 415 PEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSM 474
Query: 288 MCALAKAEKFDEA 300
+ A +EK+ +A
Sbjct: 475 LHAYNASEKWGKA 487
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/222 (18%), Positives = 97/222 (43%), Gaps = 9/222 (4%)
Query: 92 GLFKWAS------LHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTI 145
G ++WA L + S +Y+ +++ G + ++ +M G L T
Sbjct: 60 GQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTH 119
Query: 146 AKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ 205
V+ + Q++ A+ F+ ++ + +T + N+++ L K QA ++ +++
Sbjct: 120 NIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE 179
Query: 206 HIA---PNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNF 262
A P+ TF +H + +E + M G +P ++SY+ ++ Y
Sbjct: 180 KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMS 239
Query: 263 SKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+L +++ P+VV+YT ++ + ++ + +A +V
Sbjct: 240 GTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 281
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 84/209 (40%), Gaps = 40/209 (19%)
Query: 99 LHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMR---CEGSIITLNTIAKVMRRFVGA 155
+ N+ + Y+MM+ + R +D+ R L +M+ C+ T + + R A
Sbjct: 3 IQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGR---A 59
Query: 156 GQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFN 215
GQW A+ + DD+ L+ IAP+ T+N
Sbjct: 60 GQWRWAMNLMDDM----------------------------------LRAAIAPSRSTYN 85
Query: 216 IFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQ 275
I+ EA ++M G P +++++ ++ Y + + +SK + M+
Sbjct: 86 NLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGA 145
Query: 276 DCSPNVVTYTIIMCALAKAEKFDEALQVI 304
P+ T+ II+ L+K + +AL +
Sbjct: 146 KVRPDTTTFNIIIYCLSKLGQSSQALDLF 174
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 84/175 (48%), Gaps = 4/175 (2%)
Query: 130 LDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCK 189
+++M + +T T+ + + A + A+ ++ + G+ + +L+D L K
Sbjct: 285 MEEMSVYPNHVTYTTLVDSLFK---ANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFK 341
Query: 190 EEFVEQARQIY-LELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVIS 248
+ +A + + + L+ + PN T+ + G CK + A + I +M P V++
Sbjct: 342 AGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVT 401
Query: 249 YSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
YS++I Y + + LL +M+ Q+ PN TY ++ L KA K + A+++
Sbjct: 402 YSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIEL 456
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 112/279 (40%), Gaps = 16/279 (5%)
Query: 19 IASCGARGFRHQEQCQSLMRSVDILTSKVAKGSSEEEIIRSLCNDQACDAIHLSPNLINI 78
+ SCG + SLM S +I+ + + EE I L N IH PNL
Sbjct: 599 MKSCGIK--------PSLM-SCNIVVGMLCENGKMEEAIHIL-NQMMLMEIH--PNLTTY 646
Query: 79 -LLRRYKDDWKSALGLFKWAS--LHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRC 135
+ K A +FK L + S + Y+ ++ L ++ + K ++ M
Sbjct: 647 RIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEA 706
Query: 136 EGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQ 195
G I T +M + A+ + + G+ N + N ++ L +++
Sbjct: 707 RGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKE 766
Query: 196 ARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQ 254
+ E+K + + P+ T+N I G KI ++ + EM G P +Y+ +I
Sbjct: 767 VDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLIS 826
Query: 255 CYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAK 293
+ N + ELL EM + SPN TY ++ L K
Sbjct: 827 EFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 865
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 69/137 (50%), Gaps = 6/137 (4%)
Query: 164 IFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCK 223
I+ + G+ + ++N+L+ + CK + A I L + I+ + T+N I G C+
Sbjct: 116 IYSKMIACGVSPDVFALNVLIHSFCKVGRLSFA--ISLLRNRVISIDTVTYNTVISGLCE 173
Query: 224 IRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVT 283
+EA+ + EM G P +SY+T+I +C NF + L+DE+ N++T
Sbjct: 174 HGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISEL----NLIT 229
Query: 284 YTIIMCALAKAEKFDEA 300
+TI++ + +EA
Sbjct: 230 HTILLSSYYNLHAIEEA 246
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 139 IITLNTIA--KVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQA 196
+I+++T+ V+ G +A + ++ +G+ +T S N L+D CK +A
Sbjct: 156 VISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRA 215
Query: 197 RQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCY 256
+ + E+ + N T I + + + +EEA+ ++M G P V+++S+II
Sbjct: 216 KALVDEISEL---NLITHTILLSSYYNLHAIEEAY---RDMVMSGFDPDVVTFSSIINRL 269
Query: 257 CNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
C + LL EM+ PN VTYT ++ +L KA + AL +
Sbjct: 270 CKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALAL 316
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 1/151 (0%)
Query: 156 GQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY-LELKQHIAPNAHTF 214
G A + D++ G +T + N L+ V +A Y + ++ I+PN T+
Sbjct: 692 GMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATY 751
Query: 215 NIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQA 274
N I G ++E + EMK G RP +Y+ +I N + EM A
Sbjct: 752 NTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIA 811
Query: 275 QDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
P TY +++ A K +A ++++
Sbjct: 812 DGLVPKTSTYNVLISEFANVGKMLQARELLK 842
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/164 (18%), Positives = 73/164 (44%), Gaps = 1/164 (0%)
Query: 144 TIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL 203
T + ++ R G+ + + +++ + + N + L+D+L K A +Y ++
Sbjct: 261 TFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQM 320
Query: 204 KQHIAP-NAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNF 262
P + + + + G K + EA T + + P V++Y+ ++ C +
Sbjct: 321 VVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDL 380
Query: 263 SKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
S ++ +M + PNVVTY+ ++ K +EA+ ++ +
Sbjct: 381 SSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRK 424
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 1/166 (0%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y +VD L + + L QM G + L +M AG +A + F L
Sbjct: 296 TYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKML 355
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRV 227
N + L+D LCK + A I + L++ + PN T++ I+G+ K +
Sbjct: 356 LEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGML 415
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQ 273
EEA +++M+ P +Y T+I EL EM+
Sbjct: 416 EEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMR 461
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 92/198 (46%), Gaps = 6/198 (3%)
Query: 111 DMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTI--AKVMRRFVGAGQWADAVRIFDDL 168
D +V+ L R+ + +++ L+ M +G +TL+ I ++ F G A+ +++
Sbjct: 473 DALVNHLKRIGRIKEVKGLVKDMVSKG--VTLDQINYTSLIDVFFKGGDEEAALAWAEEM 530
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRV 227
Q G+ + S N+L+ + K V A Y +++ I P+ TFNI ++ K
Sbjct: 531 QERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDS 589
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
E +MK G +P ++S + ++ C + +L++M + PN+ TY I
Sbjct: 590 EGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIF 649
Query: 288 MCALAKAEKFDEALQVIE 305
+ +K ++ D + E
Sbjct: 650 LDTSSKHKRADAIFKTHE 667
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 88/169 (52%), Gaps = 3/169 (1%)
Query: 139 IITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQ 198
++T NT+AK R +G+ A+ + I L ++ N + +++ C+E +E+A +
Sbjct: 495 VVTFNTLAKAYAR-IGSTCTAEDMIIPRMLHN-KVKPNVRTCGTIVNGYCEEGKMEEALR 552
Query: 199 IYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYC 257
+ +K+ + PN FN I G+ I ++ + M+ +G +P V+++ST++ +
Sbjct: 553 FFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWS 612
Query: 258 NEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+ + + E+ +M P++ ++I+ A+A + ++A Q++ +
Sbjct: 613 SVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQ 661
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 85/179 (47%), Gaps = 5/179 (2%)
Query: 132 QMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEE 191
+M+ G L +++ F+ + D ++ G++ + + + L++
Sbjct: 556 RMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVG 615
Query: 192 FVEQARQIYLE-LKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYS 250
+++ +IY + L+ I P+ H F+I G+ + E+A + +M+ +G RP V+ Y+
Sbjct: 616 DMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYT 675
Query: 251 TIIQCYCNEQNFSKVYELLDEM-QAQDCSPNVVTYTIIMCALAKAE---KFDEALQVIE 305
II +C+ K ++ +M SPN+ TY ++ +A+ K +E L+ +E
Sbjct: 676 QIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDME 734
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 95/193 (49%), Gaps = 17/193 (8%)
Query: 115 DILGRMKVMDKL---------RDLLDQMRCEG---SIITLNTIAKVMRRFVGAGQWADAV 162
D+ R K+M+ L + + + EG S+IT T+ + R + +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTR---QKHFHSLL 374
Query: 163 RIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGW 221
+ ++ GL+ +T N +++ + ++QA +I+ ++K+ P A TFN I G+
Sbjct: 375 SLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGY 434
Query: 222 CKIRRVEEAHWTIQEM-KGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPN 280
KI ++EE+ + M + +P + + ++Q +CN++ + + ++ +MQ+ P+
Sbjct: 435 GKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPD 494
Query: 281 VVTYTIIMCALAK 293
VVT+ + A A+
Sbjct: 495 VVTFNTLAKAYAR 507
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 90/206 (43%), Gaps = 38/206 (18%)
Query: 123 MDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDD-LQTLGLEKNTESMN 181
+D+ + ++M+ G T +T +++ + G+ ++ R+ D L+ L+ N + N
Sbjct: 405 LDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCN 464
Query: 182 LLLDTLCKEEFVEQARQIYLELKQH----------------------------------- 206
+L+ C + +E+A I +++ +
Sbjct: 465 ILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLH 524
Query: 207 --IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSK 264
+ PN T ++G+C+ ++EEA MK G P + ++++I+ + N +
Sbjct: 525 NKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDG 584
Query: 265 VYELLDEMQAQDCSPNVVTYTIIMCA 290
V E++D M+ P+VVT++ +M A
Sbjct: 585 VGEVVDLMEEFGVKPDVVTFSTLMNA 610
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 77/167 (46%), Gaps = 2/167 (1%)
Query: 123 MDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNL 182
MD + +++D M G + T + +M + G I+ D+ G++ + + ++
Sbjct: 582 MDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSI 641
Query: 183 LLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKG-Y 240
L + E+A QI ++++ + PN + I GWC +++A ++M G
Sbjct: 642 LAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIV 701
Query: 241 GCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
G P + +Y T+I + + K ELL +M+ ++ P T +I
Sbjct: 702 GLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLI 748
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 2/166 (1%)
Query: 139 IITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKN-TESMNLLLDTLCKEEFVEQAR 197
+++ T+A V+ + G W +A +F + + ++N N+++ K + E+A
Sbjct: 476 VLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKAL 535
Query: 198 QIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCY 256
++ +K Q P+ T+N + V+EA + EM GC+P +Y+ +I Y
Sbjct: 536 SLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASY 595
Query: 257 CNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQ 302
S +L + M+ PN V Y ++ A++ +EA+Q
Sbjct: 596 VRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQ 641
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 125/325 (38%), Gaps = 73/325 (22%)
Query: 35 SLMRSVDILTSKVAKGSSEEEIIRSLCNDQACDAIHLSPNLINILLRRYKDDWKSALGLF 94
S++RS+D T E + SLC ++LSP +LL+ + W+ L +F
Sbjct: 88 SILRSLDSSTDI-------ETTLASLC-------LNLSPKEQTVLLKE-QTRWERVLRVF 132
Query: 95 KWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNT---------- 144
++ H ++ + Y++++ LGR D+LR +M G + T NT
Sbjct: 133 RFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGK 192
Query: 145 -------------------------IAKVMRRFVGAGQWADAVRIF------------DD 167
+A V+R F +G++ A R F D
Sbjct: 193 AGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDS 252
Query: 168 LQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNA----------HTFNIF 217
+ + +S L L E F AR +E H A + TFN
Sbjct: 253 IDDFPKNGSAQSPVNLKQFLSMELFKVGARNP-IEKSLHFASGSDSSPRKPRLTSTFNTL 311
Query: 218 IHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDC 277
I + K R+ +A EM G ++++T+I + S+ LL +M+ +
Sbjct: 312 IDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGI 371
Query: 278 SPNVVTYTIIMCALAKAEKFDEALQ 302
SP+ TY I++ A A + AL+
Sbjct: 372 SPDTKTYNILLSLHADAGDIEAALE 396
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 108/234 (46%), Gaps = 9/234 (3%)
Query: 77 NILLRRYKDD--WKSALGLFKWASLHSNFQHSPE--SYDMMVDILGRMKVMDKLRDLLDQ 132
N++++ Y + AL LFK + P+ +Y+ + +L + ++D+ + +L +
Sbjct: 519 NVMIKAYGKAKLHEKALSLFKGMKNQGTW---PDECTYNSLFQMLAGVDLVDEAQRILAE 575
Query: 133 MRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEF 192
M G T A ++ +V G +DAV +++ ++ G++ N L++ +
Sbjct: 576 MLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGM 635
Query: 193 VEQARQIYLELKQHIAPNAH-TFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYST 251
VE+A Q + +++H + H I + K+ +EEA +MK P V + ++
Sbjct: 636 VEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNS 695
Query: 252 IIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
++ + S+ + + ++ + +V+++ +M DEA++V E
Sbjct: 696 MLSLCADLGIVSEAESIFNALREKGTC-DVISFATMMYLYKGMGMLDEAIEVAE 748
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 108/242 (44%), Gaps = 7/242 (2%)
Query: 71 LSPNLI--NILLR---RYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDK 125
L P+++ N LL + K+ + A+ L H+ Q Y ++ I ++
Sbjct: 197 LKPDVVTYNTLLAGCIKVKNGYPKAIELIGELP-HNGIQMDSVMYGTVLAICASNGRSEE 255
Query: 126 LRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLD 185
+ + QM+ EG + + ++ + G + A + +++++GL N M LL
Sbjct: 256 AENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLK 315
Query: 186 TLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRP 244
K +++R++ EL+ A N + + + G K ++EEA +MKG G R
Sbjct: 316 VYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRS 375
Query: 245 CVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+ S +I C + F + EL + + ++V ++CA +A + + ++++
Sbjct: 376 DGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMM 435
Query: 305 ER 306
++
Sbjct: 436 KK 437
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 109/272 (40%), Gaps = 48/272 (17%)
Query: 76 INILLRRY--KDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQM 133
+N++LR + W+ + LF+W H S +Y + +G K + K ++ +
Sbjct: 101 LNVILRDFGISGRWQDLIQLFEWMQQHGKI--SVSTYSSCIKFVG-AKNVSKALEIYQSI 157
Query: 134 RCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFV 193
E + I + ++ V G+ +++FD ++ GL+ + + N LL K V
Sbjct: 158 PDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIK---V 214
Query: 194 EQARQIYLELKQHIAPNAHTFNIFIHGW-----CKIRRVEEAHWTIQEMKGYGCRPCVIS 248
+ +EL + N + ++G R EEA IQ+MK G P +
Sbjct: 215 KNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYH 274
Query: 249 YSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVV-------------------------- 282
YS+++ Y + ++ K EL+ EM++ PN V
Sbjct: 275 YSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELE 334
Query: 283 ---------TYTIIMCALAKAEKFDEALQVIE 305
Y ++M L+KA K +EA + +
Sbjct: 335 SAGYAENEMPYCMLMDGLSKAGKLEEARSIFD 366
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 82/165 (49%), Gaps = 1/165 (0%)
Query: 125 KLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLL 184
K +L+ +M+ G + + +++ ++ G + + + +L++ G +N +L+
Sbjct: 290 KADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLM 349
Query: 185 DTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCR 243
D L K +E+AR I+ ++K + + + + +I I C+ +R +EA ++ + +
Sbjct: 350 DGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEK 409
Query: 244 PCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
++ +T++ YC V ++ +M Q SP+ T+ I++
Sbjct: 410 CDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILI 454
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Query: 160 DAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFI 218
+A IF +L+ G + ++ C++ ++ AR+++ E+ K+ + PN +N+ I
Sbjct: 301 EAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMI 360
Query: 219 HGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCS 278
HG K + EM G ++S +T+I+ +C+ + +E+ M +
Sbjct: 361 HGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVT 420
Query: 279 PNVVTYTIIMCALAKAEKFDEALQV 303
PN +TY ++ K K ++ L++
Sbjct: 421 PNAITYNALIKGFCKENKVEKGLKL 445
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 53/106 (50%)
Query: 201 LELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQ 260
L L + PN +T N IHG+ K R+ +A W EM+ P +Y+ ++ C
Sbjct: 430 LMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLG 489
Query: 261 NFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+ ++L DEM + C P+++TYT ++ L + +A ++ R
Sbjct: 490 HLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSR 535
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 103/219 (47%), Gaps = 11/219 (5%)
Query: 95 KWASLHSNF--QHSPESYDMMVDILGRMKV--MDKLRDLLDQMRCEGSIITLNTIAKVMR 150
KW S ++ + PE+ ++D + + + + LR+ + Q + L+ + +MR
Sbjct: 70 KWFSDQKDYDQKEDPEAIFNVLDYILKSSLDRLASLRESVCQTKSFDYDDCLSIHSSIMR 129
Query: 151 RFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAP 209
G+ A+ + + G+ + N LL+ LCK ++E+A + E+++ +P
Sbjct: 130 DLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSP 189
Query: 210 NAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYC-----NEQNFSK 264
N ++N I G C + V++A + M YG RP ++ + I+ C N
Sbjct: 190 NCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKL 249
Query: 265 VYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
+ E+LD QA + ++V TI+M + K +AL+V
Sbjct: 250 LEEILDSSQA-NAPLDIVICTILMDSCFKNGNVVQALEV 287
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 182 LLLDTLCKEEFVEQARQIYLELKQHIAP-NAHTFNIFIHGWCKIRRVEEAHWTIQEMKGY 240
+L+D+ K V QA +++ E+ Q P ++ +N+ I G C + A+ + +M
Sbjct: 270 ILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKR 329
Query: 241 GCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCAL 291
G P V +Y+T+I C E F + +L MQ +P+ ++Y +I+ L
Sbjct: 330 GVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGL 380
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 74/157 (47%), Gaps = 4/157 (2%)
Query: 154 GAGQWAD---AVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAP 209
G G++ D A+ + + + + G++ N + N L+ K + A + E++ I P
Sbjct: 414 GYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHP 473
Query: 210 NAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELL 269
+ T+N+ + C + + A EM GC+P +I+Y+ +++ C + K LL
Sbjct: 474 DTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLL 533
Query: 270 DEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+QA + + V + I+ + ++ EA V ++
Sbjct: 534 SRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKK 570
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 96/229 (41%), Gaps = 8/229 (3%)
Query: 85 DDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMR---CEGSIIT 141
D W L +F+W + Y ++ ++G+ L +M+ C
Sbjct: 111 DKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASV 170
Query: 142 LNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEK---NTESMNLLLDTLCKEEFVEQARQ 198
N + + + VR + D + G+E+ N + N+LL + V+Q
Sbjct: 171 YNALITAHLHTRDKAKALEKVRGYLD-KMKGIERCQPNVVTYNILLRAFAQSGKVDQVNA 229
Query: 199 IYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYC 257
++ +L ++P+ +TFN + + K ++E + M+ C+P +I+++ +I Y
Sbjct: 230 LFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYG 289
Query: 258 NEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+Q F K+ + + P + T+ ++ KA D+A V ++
Sbjct: 290 KKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKK 338
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 75/150 (50%), Gaps = 1/150 (0%)
Query: 148 VMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHI 207
VMR V G+ + V + + ++ +E + ++L + +E +A +++ EL
Sbjct: 257 VMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLG 316
Query: 208 -APNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVY 266
AP+ +T+N++I+G CK +E A + M G P V++Y+ +I+ + S+
Sbjct: 317 LAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAK 376
Query: 267 ELLDEMQAQDCSPNVVTYTIIMCALAKAEK 296
L EM+ + N T+ I++ A + ++
Sbjct: 377 TLWKEMETNGVNRNSHTFDIMISAYIEVDE 406
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 96/229 (41%), Gaps = 8/229 (3%)
Query: 85 DDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMR---CEGSIIT 141
D W L +F+W + Y ++ ++G+ L +M+ C
Sbjct: 111 DKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASV 170
Query: 142 LNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEK---NTESMNLLLDTLCKEEFVEQARQ 198
N + + + VR + D + G+E+ N + N+LL + V+Q
Sbjct: 171 YNALITAHLHTRDKAKALEKVRGYLD-KMKGIERCQPNVVTYNILLRAFAQSGKVDQVNA 229
Query: 199 IYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYC 257
++ +L ++P+ +TFN + + K ++E + M+ C+P +I+++ +I Y
Sbjct: 230 LFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYG 289
Query: 258 NEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+Q F K+ + + P + T+ ++ KA D+A V ++
Sbjct: 290 KKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKK 338
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 12/160 (7%)
Query: 148 VMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCK-------EEFVEQARQIY 200
+R G+ +A + +L +T + N LL LCK EFV++ R +
Sbjct: 165 AVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDF 224
Query: 201 LELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQ 260
+ P+ +F I I C + + EA + + ++ G +P Y+TI++ +C
Sbjct: 225 -----DVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLS 279
Query: 261 NFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
S+ + +M+ + P+ +TY ++ L+KA + +EA
Sbjct: 280 KGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 74/146 (50%), Gaps = 2/146 (1%)
Query: 163 RIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGW 221
R+ + + GLE + + ++ + +LC+ V++A+ + EL ++H P+ +T+N +
Sbjct: 145 RVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHL 204
Query: 222 CKIRRVEEAHWTIQEMK-GYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPN 280
CK + + + + EM+ + +P ++S++ +I CN +N + L+ ++ P+
Sbjct: 205 CKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPD 264
Query: 281 VVTYTIIMCALAKAEKFDEALQVIER 306
Y IM K EA+ V ++
Sbjct: 265 CFLYNTIMKGFCTLSKGSEAVGVYKK 290
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 75/152 (49%), Gaps = 14/152 (9%)
Query: 155 AGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHT 213
AG++ +A IF +L GL+ + ++ N+++ + + +A ++Y E+ ++ + P+ T
Sbjct: 27 AGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLYAEMIRRGLVPDTIT 82
Query: 214 FNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQ 273
+N IHG CK ++ +A + C +++T+I YC L EM
Sbjct: 83 YNSMIHGLCKQNKLAQARKV--------SKSCS-TFNTLINGYCKATRVKDGMNLFCEMY 133
Query: 274 AQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+ NV+TYT ++ + F+ AL + +
Sbjct: 134 RRGIVANVITYTTLIHGFRQVGDFNTALDIFQ 165
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 96/204 (47%), Gaps = 12/204 (5%)
Query: 101 SNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWAD 160
SN Y++++ L + D+ ++ + G + T +M RF G+
Sbjct: 8 SNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTY-NMMIRFSSLGR--- 63
Query: 161 AVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHG 220
A +++ ++ GL +T + N ++ LCK+ + QAR++ + + TFN I+G
Sbjct: 64 AEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV--------SKSCSTFNTLING 115
Query: 221 WCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPN 280
+CK RV++ EM G VI+Y+T+I + +F+ ++ EM + +
Sbjct: 116 YCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSS 175
Query: 281 VVTYTIIMCALAKAEKFDEALQVI 304
+T+ I+ L ++ +A+ ++
Sbjct: 176 SITFRDILPQLCSRKELRKAVAML 199
>AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11605156-11610651 FORWARD
LENGTH=843
Length = 843
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 107/218 (49%), Gaps = 10/218 (4%)
Query: 92 GLFKWASLHSNFQHSPES--YDMMVDIL-GRMKVMDKLRDLLDQMRCEGSIITLNTIAKV 148
+FK+ LH P S Y+ +V L G +V+ L D+++ M G +I+ N + +
Sbjct: 376 AIFKFNKLHEELDIVPSSTSYENLVSYLCGSNEVVTAL-DIVENMCEAGLVISANILHSL 434
Query: 149 MRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HI 207
++ ++ RI+ + ++ N+E+ ++ + + E A + LK ++
Sbjct: 435 LQAIEQILEFNLVQRIYSIMSNKSVKPNSETFRKSINLCIRIKDFEGAYNMLGNLKNFNL 494
Query: 208 APNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQ-NFSKVY 266
APN+ +N + G+ + ++V A ++EMK +P +++S +I YC E+ +K Y
Sbjct: 495 APNSSMYNSIMAGYFREKKVNSALKVLKEMKEADVKPDSVTFSYLIN-YCGEEATIAKYY 553
Query: 267 ELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+ EM+ N Y ++ A A +F++A QV+
Sbjct: 554 K---EMKQAGVEVNKHVYMSLVKAYASCGQFEKAKQVL 588
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 90/203 (44%), Gaps = 3/203 (1%)
Query: 107 PESYDMMVDILGRMKVMDK--LRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRI 164
P D++ ++G + +D + L M G + + T++K+ + + ++
Sbjct: 325 PMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKA 384
Query: 165 FDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCK 223
++ L + G +S +L++ LCK V ++ E+K+ +AP+ +N I CK
Sbjct: 385 YELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCK 444
Query: 224 IRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVT 283
+ A EM GC+ + +Y+ +I+ E + L D+M + P+
Sbjct: 445 AEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETI 504
Query: 284 YTIIMCALAKAEKFDEALQVIER 306
Y ++ L K K + A++V +
Sbjct: 505 YMSLIEGLCKETKIEAAMEVFRK 527
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/273 (17%), Positives = 109/273 (39%), Gaps = 38/273 (13%)
Query: 71 LSPNLINILLRRYKDDWKS-ALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDL 129
+SP+L+ ++ + + S ALG F WA+ + H SY + L + + L
Sbjct: 45 ISPSLVARVIDPFLLNHHSLALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMDAL 104
Query: 130 LDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCK 189
Q++ ++ + ++ V + A + ++ + G E + + N LL L
Sbjct: 105 FKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLTS 164
Query: 190 EEFVEQARQIYLELK-QHIAPNAHTFNIFI------------------------------ 218
+ + A++++++++ + ++ N F ++I
Sbjct: 165 DGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSI 224
Query: 219 ------HGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEM 272
H CK R +A + ++E++ C+P ++Y I + + N + +L +
Sbjct: 225 IALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKK 284
Query: 273 QAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+ +P Y + L A++ EA +V E
Sbjct: 285 RKLGVAPRSSDYRAFILDLISAKRLTEAKEVAE 317
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 73/150 (48%), Gaps = 1/150 (0%)
Query: 156 GQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTF 214
G A + DL + + + ++ +LC+ V+ A+ + L++ + AP F
Sbjct: 351 GTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVF 410
Query: 215 NIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQA 274
N+ +H K ++EA ++ M+ G +P V +Y+ II Y + E+L E +
Sbjct: 411 NLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKK 470
Query: 275 QDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+ + VTY ++ K E++DEAL+++
Sbjct: 471 KHKKLSPVTYHALIRGYCKIEEYDEALKLL 500
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Query: 160 DAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY-LELKQHIAPNAHTFNIFI 218
DA + D+ + G NL++ K +++A+++ L + + P+ +T+ + I
Sbjct: 390 DAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVII 449
Query: 219 HGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCS 278
G+ K ++EA + E K + ++Y +I+ YC + + + +LL+EM
Sbjct: 450 SGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQ 509
Query: 279 PNVVTYTIIM 288
PN Y ++
Sbjct: 510 PNADEYNKLI 519
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 10/170 (5%)
Query: 128 DLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTL 187
+L +M G + T +++ AG A IF ++ + G+ + + N+LLD L
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 188 CKEEFVEQAR---------QIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEM 237
CK +E+A ++ L + + PN T+ I G+CK EEA+ ++M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 238 KGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
K G P +Y+T+I+ + + + + EL+ EM++ + + TY ++
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 171
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 11/146 (7%)
Query: 162 VRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHG 220
+ +F ++ GL NT + L+ L + + A++I+ E+ + P+ T+NI + G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 221 WCKIRRVEEAHWTIQEMKGY---------GCRPCVISYSTIIQCYCNEQNFSKVYELLDE 271
CK ++E+A + G+ G +P V++Y+T+I +C + + Y L +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 272 MQAQDCSPNVVTY-TIIMCALAKAEK 296
M+ P+ TY T+I L +K
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDK 146
>AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5213290-5215296 FORWARD
LENGTH=668
Length = 668
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 104/244 (42%), Gaps = 6/244 (2%)
Query: 69 IHLSPNLINILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRD 128
+ +L+ +++ R + + AL F+W F+H ++Y+ M +LG+ K +D+ ++
Sbjct: 249 VEFKSDLVKMIVERLDVEPRKALLFFRWIDESDLFKHDEKTYNAMARVLGKEKFLDRFQN 308
Query: 129 LLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMN---LLLD 185
++ +MR G + + T +V RF +AV +F+ N + + LLL
Sbjct: 309 IVVEMRSAGYEVEIETYVRVSTRFCQTKLIKEAVDLFEIAMAGSSSSNNPTPHCFCLLLK 368
Query: 186 TLCKEEFVEQ---ARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGC 242
+ + ++ +R + + K A + + RVE+++ ++EMK G
Sbjct: 369 KIVTAKILDMDLFSRAVKVYTKNGNALTDSLLKSVLKSLRSVDRVEQSNELLKEMKRGGY 428
Query: 243 RPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQ 302
P S I + + E +D M++ + + ++ + DEAL
Sbjct: 429 VPSGDMQSMIASSLSRKGKKDEADEFVDFMESSGNNLDDKAMASLVEGYCDSGNLDEALV 488
Query: 303 VIER 306
E+
Sbjct: 489 CFEK 492
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 80/159 (50%), Gaps = 3/159 (1%)
Query: 144 TIAKVMRRFVGAGQWADAVRIFDDL-QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLE 202
T+ + + + A +W A+++F+ L + L + N L+ L K + E+A +++ E
Sbjct: 116 TVLESLHERITALRWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQE 175
Query: 203 L-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKG-YGCRPCVISYSTIIQCYCNEQ 260
+ + N + + + + R + A ++ MK + C+P V +YS +I+ +
Sbjct: 176 MINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVF 235
Query: 261 NFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDE 299
F KV +LL +M+ Q PN +TY ++ A KA+ F E
Sbjct: 236 AFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVE 274
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 96/203 (47%), Gaps = 10/203 (4%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQM----RCEGSIITLNTIAKVMRRFVGAGQWADAVRI 164
+Y+ ++D G+ K+ ++ L QM C+ T+N+ +R F G GQ
Sbjct: 258 TYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNS---TLRAFGGNGQIEMMENC 314
Query: 165 FDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQI--YLELKQHIAPNAHTFNIFIHGWC 222
++ Q+ G+E N + N+LLD+ K ++ + Y++ K H + T+N+ I +
Sbjct: 315 YEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQ-KYHYSWTIVTYNVVIDAFG 373
Query: 223 KIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVV 282
+ +++ + + M+ P ++ ++++ Y K+ +L ++ D ++V
Sbjct: 374 RAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLV 433
Query: 283 TYTIIMCALAKAEKFDEALQVIE 305
+ ++ A + EKF E V+E
Sbjct: 434 FFNCLVDAYGRMEKFAEMKGVLE 456
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 96/220 (43%), Gaps = 12/220 (5%)
Query: 87 WKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEG---SIITLN 143
+ +A L + N Q +Y +++ ++ DK++DLL MR +G + IT N
Sbjct: 201 FDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYN 260
Query: 144 TIAKVMRRFVGAGQWADAVRIFDDLQTLGLE---KNTESMNLLLDTLCKEEFVEQARQIY 200
T+ + A + + +Q LG + ++ +MN L +E Y
Sbjct: 261 TLIDA---YGKAKMFVEMESTL--IQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCY 315
Query: 201 LELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNE 259
+ + I PN TFNI + + K ++ ++ M+ Y +++Y+ +I +
Sbjct: 316 EKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRA 375
Query: 260 QNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDE 299
+ ++ L MQ++ P+ VT ++ A +A K D+
Sbjct: 376 GDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADK 415
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 94/216 (43%), Gaps = 39/216 (18%)
Query: 126 LRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLL- 184
++L ++ E + + NT+ K + G G + +AV + D+++ GL+ + + N+LL
Sbjct: 164 FKELPGKLSIEPDVASYNTLIKGL---CGKGSFTEAVALIDEIENKGLKPDHITFNILLH 220
Query: 185 DTLCKEEFVEQ----ARQIYLELKQHI-------------------------------AP 209
++ K +F E AR + +K+ I P
Sbjct: 221 ESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKP 280
Query: 210 NAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELL 269
+ TF I G+ +++EA +E++ GCRP +++++ C + YEL
Sbjct: 281 DVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELC 340
Query: 270 DEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
E+ A+ + ++ AL K K DEA +++E
Sbjct: 341 KEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVE 376
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 81/166 (48%), Gaps = 5/166 (3%)
Query: 142 LNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTE-SMNLLLDTLCKEEFVEQARQIY 200
+NT + ++ G + A ++F+ +G+ T + N ++ + K+ + + AR +
Sbjct: 597 MNTFLSI---YLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVL 653
Query: 201 LELKQHI-APNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNE 259
++ ++ A + T+N+ I G K+ R + A + + G ++ Y+T+I
Sbjct: 654 DQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKA 713
Query: 260 QNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
+ +L D M++ +P+VV+Y ++ +KA K EA + ++
Sbjct: 714 TRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLK 759
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 11/193 (5%)
Query: 104 QHSPESYD--MMVDIL------GRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGA 155
+ P+S+D MM L G + + KL ++ + M + +T T +M FV
Sbjct: 586 EAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGV--TDLTSYTYNSMMSSFVKK 643
Query: 156 GQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTF 214
G + A + D + + + N+++ L K + A + L KQ + +
Sbjct: 644 GYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMY 703
Query: 215 NIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQA 274
N I+ K R++EA MK G P V+SY+T+I+ + Y+ L M
Sbjct: 704 NTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLD 763
Query: 275 QDCSPNVVTYTII 287
C PN VT TI+
Sbjct: 764 AGCLPNHVTDTIL 776
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 104/222 (46%), Gaps = 12/222 (5%)
Query: 86 DWKSALGLFKWASLHSNFQHS---PE--SYDMMVDILGRMKVMDKLRDLL---DQMRCEG 137
D +AL LFK S+ S P+ +Y+ ++ +L + K +D L D+++ G
Sbjct: 263 DLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLC---LFGKAKDALIVWDELKVSG 319
Query: 138 SIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQAR 197
+T +++ + + DA+RI+ ++Q G +T N LLD K V +A
Sbjct: 320 HEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEAC 379
Query: 198 QIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCY 256
Q++ ++ Q + + T+NI I G + R E ++K G I++S +
Sbjct: 380 QLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQL 439
Query: 257 CNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFD 298
C E +L++EM+ + S ++VT + ++ K ++D
Sbjct: 440 CREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWD 481
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 11/175 (6%)
Query: 140 ITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEK-NTESMNLLLDTLCKEEFVEQARQ 198
+ +N + +RR A ++ R+F+ L+ + K +T S N+ + ++ A
Sbjct: 213 VAVNELLVGLRR---ADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALS 269
Query: 199 IYLELKQH-------IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYST 251
++ E+K+ P+ T+N IH C + ++A E+K G P +Y
Sbjct: 270 LFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRI 329
Query: 252 IIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
+IQ C + EMQ P+ + Y ++ KA K EA Q+ E+
Sbjct: 330 LIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEK 384
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 114/268 (42%), Gaps = 40/268 (14%)
Query: 68 AIHLSPNLINILLRRYKDD--WKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVM-- 123
+I LS +LI +L R+K+ K AL F W+S N +H +SY + + IL + +++
Sbjct: 72 SIDLSDSLIETILLRFKNPETAKQALSFFHWSSHTRNLRHGIKSYALTIHILVKARLLID 131
Query: 124 ----------------DKLRDLLDQMRCEGSI-----ITLNTIAKVMRRFVGAGQWADAV 162
D + LLD S + + AK+ R++ G
Sbjct: 132 ARALIESSLLNSPPDSDLVDSLLDTYEISSSTPLVFDLLVQCYAKI--RYLELG-----F 184
Query: 163 RIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGW 221
+F L G + ++N L+ K + + +IY + + I PN T I I
Sbjct: 185 DVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVL 244
Query: 222 CKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNV 281
CK R++E + + G C P VI ++++ E + LL + ++ +
Sbjct: 245 CKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDT 304
Query: 282 VTYTIIMCALAK------AEK-FDEALQ 302
+ Y+I++ A AK A K FDE LQ
Sbjct: 305 IGYSIVVYAKAKEGDLVSARKVFDEMLQ 332
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 88/188 (46%), Gaps = 13/188 (6%)
Query: 129 LLDQMRCEGSI----------ITLNTIAKVMRRFVGA--GQWADAVRIFDDLQTLGLEKN 176
+L++MR E S+ + ++TI + + A G A ++FD++ G N
Sbjct: 279 VLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSAN 338
Query: 177 TESMNLLLDTLCKEEFVEQARQIYLELKQH-IAPNAHTFNIFIHGWCKIRRVEEAHWTIQ 235
+ + + C++ V++A ++ E+++ ++P TFN I G+ + E+ +
Sbjct: 339 SFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCE 398
Query: 236 EMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAE 295
M G P +++ +++ +N ++ E+L + + P+ TY+ ++ +
Sbjct: 399 VMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGN 458
Query: 296 KFDEALQV 303
D+AL++
Sbjct: 459 DIDQALKL 466
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 4/147 (2%)
Query: 160 DAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY-LELKQHIAPNAHTFNIFI 218
D+ IF ++ GL N +M LD LCK+ V++A +++ L + P + +
Sbjct: 117 DSDEIFKKMKEGGLIPNAVAM---LDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVV 173
Query: 219 HGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCS 278
+CK ++E+A ++M+ G P SY ++Q N EM S
Sbjct: 174 EAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHS 233
Query: 279 PNVVTYTIIMCALAKAEKFDEALQVIE 305
PNV T+ ++ AL + + ++A I+
Sbjct: 234 PNVPTFVELVDALCRVKGVEQAQSAID 260
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 4/147 (2%)
Query: 160 DAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIY-LELKQHIAPNAHTFNIFI 218
D+ IF ++ GL N +M LD LCK+ V++A +++ L + P + +
Sbjct: 117 DSDEIFKKMKEGGLIPNAVAM---LDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVV 173
Query: 219 HGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCS 278
+CK ++E+A ++M+ G P SY ++Q N EM S
Sbjct: 174 EAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHS 233
Query: 279 PNVVTYTIIMCALAKAEKFDEALQVIE 305
PNV T+ ++ AL + + ++A I+
Sbjct: 234 PNVPTFVELVDALCRVKGVEQAQSAID 260
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%)
Query: 207 IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVY 266
I P+ + I G+ +++A +EM G P V +Y+++I+ C F +
Sbjct: 720 IDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREAC 779
Query: 267 ELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
LL EM+++ C+PN V Y+ ++ L KA K EA +VI+
Sbjct: 780 WLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIK 818
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Query: 161 AVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIH 219
A+ + ++ +G++ + L+D +++A++++ E+ + PN T+N I
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 220 GWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEM 272
G C EA W ++EM+ GC P + YST++ S+ +++ EM
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEM 820
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 59/119 (49%)
Query: 155 AGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTF 214
AG+ A ++D + G+ S L+L + K E + A + +L++ +
Sbjct: 616 AGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKKRLY 675
Query: 215 NIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQ 273
+ I G CK ++++A ++EMKG G +P + Y IQ CNE+ + + L++E +
Sbjct: 676 QVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFR 734
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 3/197 (1%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
Y ++++ L K D + DQ+ G + + T + ++++F G+ +A L
Sbjct: 219 GYHVLLNALVEEKCFDSFDVIFDQISVRGFVCAV-THSILVKKFCKQGKLDEAEDYLRAL 277
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNA-HTFNIFIHGWCKIRRV 227
+ +L+D LC + ++A ++ E+K N +NI+I K +
Sbjct: 278 LPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFL 337
Query: 228 EEAHWTIQEMKGY-GCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTI 286
+Q++ GC V Y++++ E N VY++L EM + SPN T
Sbjct: 338 NNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNA 397
Query: 287 IMCALAKAEKFDEALQV 303
+C KA DEAL++
Sbjct: 398 ALCFFCKAGFVDEALEL 414
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 115/254 (45%), Gaps = 18/254 (7%)
Query: 55 EIIRSLCNDQACDAIHLSPNLINILLR-------------RYKDDWKSALGLFKWASLHS 101
+I+R+ ND A +L +L N+ LR RY D L F WA+
Sbjct: 85 DILRAPSNDGDDRAFYL--HLSNLRLRLTEKFVLDVLSHTRY--DILCCLKFFDWAARQP 140
Query: 102 NFQHSPESYDMMVDILGRMKVMDKLRDLLDQ-MRCEGSIITLNTIAKVMRRFVGAGQWAD 160
F H+ ++ + IL K++ + D LD+ + E +L ++ + AG+
Sbjct: 141 GFHHTRATFHAIFKILRGAKLVTLMIDFLDRSVGFESCRHSLRLCDALVVGYAVAGRTDI 200
Query: 161 AVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHG 220
A++ F +++ GL+ ++ ++LL+ L +E+ + I+ ++ A T +I +
Sbjct: 201 ALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGFVCAVTHSILVKK 260
Query: 221 WCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPN 280
+CK +++EA ++ + C ++ C+++ F + +LLDE++
Sbjct: 261 FCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNM 320
Query: 281 VVTYTIIMCALAKA 294
Y I + AL KA
Sbjct: 321 DRAYNIWIRALIKA 334
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 1/143 (0%)
Query: 164 IFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWC 222
I ++ G+ N ++MN L CK FV++A ++Y + AP A ++N IH C
Sbjct: 379 ILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLC 438
Query: 223 KIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVV 282
VE+A+ ++ G ++ST+ C + EL+ +D P +
Sbjct: 439 ANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRI 498
Query: 283 TYTIIMCALAKAEKFDEALQVIE 305
I+ AL K ++AL + E
Sbjct: 499 AGCKIISALCDVGKVEDALMINE 521
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 98/203 (48%), Gaps = 8/203 (3%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAK--VMRRFVGAGQWADAVRIFD 166
S++ +++ K DK+ L D++ + I + I+ +++ + +G A+ I
Sbjct: 139 SFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMR 198
Query: 167 DLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCK-- 223
+Q G+E T + +L +L K+ +E A ++ E+ K+ + +N+ I K
Sbjct: 199 QMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKES 258
Query: 224 IRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVT 283
RV+E I+EM G +P ISY+ ++ YC + ++ + ++ +C+PN T
Sbjct: 259 PERVKE---LIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAAT 315
Query: 284 YTIIMCALAKAEKFDEALQVIER 306
+ ++ L + +++ + ++
Sbjct: 316 FRTLIFHLCYSRLYEQGYAIFKK 338
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 92/186 (49%), Gaps = 6/186 (3%)
Query: 122 VMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMN 181
V + +L ++ + I++ NT+ K + +AV + D+++ GL+ + + N
Sbjct: 163 VEELFNELPGKLSIKPDIVSYNTLIKAL---CEKDSLPEAVALLDEIENKGLKPDIVTFN 219
Query: 182 -LLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKG 239
LLL + K +F E +I+ ++ ++++A + T+N + G + +E E+K
Sbjct: 220 TLLLSSYLKGQF-ELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKA 278
Query: 240 YGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDE 299
G +P V S++ +I+ NE + E+ P+ T+ +++ A+ KA F+
Sbjct: 279 SGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFES 338
Query: 300 ALQVIE 305
A+++ +
Sbjct: 339 AIELFK 344
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 91/201 (45%), Gaps = 7/201 (3%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEG---SIITLNTIAKVMRRFVGAGQWADAVRIF 165
SY+ ++ L + + LLD++ +G I+T NT+ ++ ++ GQ+ I+
Sbjct: 182 SYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTL--LLSSYL-KGQFELGEEIW 238
Query: 166 DDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKI 224
+ + + + N L L E ++ ++ ELK + P+ +FN I G
Sbjct: 239 AKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINE 298
Query: 225 RRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTY 284
+++EA +E+ +G RP +++ ++ C +F EL E ++ T
Sbjct: 299 GKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTL 358
Query: 285 TIIMCALAKAEKFDEALQVIE 305
++ L K K +EA ++++
Sbjct: 359 QQLVDELVKGSKREEAEEIVK 379
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 74/161 (45%), Gaps = 1/161 (0%)
Query: 145 IAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK 204
+ +++ G + A+++ + ++ G+ K + LD + K + +++L
Sbjct: 58 VGDTIKKLRNRGLYYPALKLSEVMEERGMNKTVSDQAIHLDLVAKAREITAGENYFVDLP 117
Query: 205 QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSK 264
+ + T+ ++ +CK E+A + +MK P +SY++++ Y K
Sbjct: 118 E-TSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEK 176
Query: 265 VYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
V ++ E++A++ P+ TY + M ALA +VIE
Sbjct: 177 VPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIE 217
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 87/185 (47%), Gaps = 15/185 (8%)
Query: 128 DLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTL 187
DLL + + +I +N++ V +G ++++ ++Q L + + S N+LL T
Sbjct: 292 DLLKE-NIKPNIYVINSLMNVNSHDLGY-----TLKVYKNMQILDVTADMTSYNILLKTC 345
Query: 188 CKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRV----EEAHWTIQ---EMKGY 240
C V+ A+ IY E K+ + + F +C I +V + W ++ +MK
Sbjct: 346 CLAGRVDLAQDIYKEAKRMESSGLLKLDAFT--YCTIIKVFADAKMWKWALKVKDDMKSV 403
Query: 241 GCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEA 300
G P ++S++I N + L +EM A C PN + I++ A +A ++D A
Sbjct: 404 GVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRA 463
Query: 301 LQVIE 305
++ +
Sbjct: 464 FRLFQ 468
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 123/290 (42%), Gaps = 59/290 (20%)
Query: 70 HLSPNL--INILLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVD---ILGRMKVMD 124
++ PN+ IN L+ D L ++K + + SY++++ + GR+ +
Sbjct: 297 NIKPNIYVINSLMNVNSHDLGYTLKVYKNMQIL-DVTADMTSYNILLKTCCLAGRVDLAQ 355
Query: 125 KLRDLLDQMRCEGSIITLN--TIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNL 182
+ +M G ++ L+ T +++ F A W A+++ DD++++G+ NT + +
Sbjct: 356 DIYKEAKRMESSG-LLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSS 414
Query: 183 LLDTLCKEEFVEQARQIYLE-LKQHIAPNAHTFNIFIHG---WCKIRR------------ 226
L+ VEQA ++ E L PN+ FNI +H C+ R
Sbjct: 415 LISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSS 474
Query: 227 VEEAHWT--------------------------------IQEMKGYGCRPCVISYSTIIQ 254
V E+ + IQ K + +P +Y+ +++
Sbjct: 475 VNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLK 534
Query: 255 CYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
C ++ + EL+DEM++ SPN +T++ ++ + + A++++
Sbjct: 535 A-CG-TDYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRIL 582
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 2/131 (1%)
Query: 144 TIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL 203
T V+ FV AG A ++ ++ +G+ N + N+LL CK+ +++A + E+
Sbjct: 454 TYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREM 513
Query: 204 KQH--IAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQN 261
+ I P+ ++NI I G I A EM+ G P ISY+T+++ +
Sbjct: 514 TEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQ 573
Query: 262 FSKVYELLDEM 272
+ DEM
Sbjct: 574 PKLANRVFDEM 584
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 97/217 (44%), Gaps = 23/217 (10%)
Query: 106 SPESYDMMV-------DILGRMKVMDKLRDLLDQMRCEGSIITLNT-IAKVMRRFVGAGQ 157
+P +D+++ +I G + VM KLR I T N I +V RR +
Sbjct: 161 APFVFDLLIKSCLDSKEIDGAVMVMRKLR----SRGINAQISTCNALITEVSRRRGASNG 216
Query: 158 WA--------DAVRIFDDLQTLG-LEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHI- 207
+ D V + + + +G ++ N + N ++ + +E E +I+ E+++ +
Sbjct: 217 YKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVG 276
Query: 208 -APNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVY 266
+PN +++N+ + +C + EA +EMK G +++Y+T+I C+ K
Sbjct: 277 CSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAK 336
Query: 267 ELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
EL +M + +TY ++ KA D L V
Sbjct: 337 ELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVV 373
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/200 (18%), Positives = 100/200 (50%), Gaps = 11/200 (5%)
Query: 112 MMVDIL--GRMKVMDKL-RDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
MMV G ++++++ R++ +++ C ++ + N + M + G ++A ++++++
Sbjct: 251 MMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVL---MEAYCARGLMSEAEKVWEEM 307
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELK-QHIAPNAHTFNIFIHGWCKIRRV 227
+ G+ + + N ++ LC V +A++++ ++ + I T+ ++G+CK V
Sbjct: 308 KVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDV 367
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYE----LLDEMQAQDCSPNVVT 283
+ +EMK G ++ +++ C++++ +V E + D ++ P+
Sbjct: 368 DSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNC 427
Query: 284 YTIIMCALAKAEKFDEALQV 303
Y +++ L + K D AL +
Sbjct: 428 YELLVKRLCEDGKMDRALNI 447
>AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 97/208 (46%), Gaps = 8/208 (3%)
Query: 102 NFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADA 161
N + S +Y +++D+ G + + +L+ M+ EG + T A R + GAG A
Sbjct: 293 NIKPSLLTYKILIDVKGATNDISGMEQILETMKDEGVELDFQTQALTARHYSGAGLKDKA 352
Query: 162 VRIFDDLQTLGLEKNTESMNLLLD---TLCKEEFVEQARQIYLELKQHIAPNAHTFNIFI 218
++ +++ LE N + LL +L +E+ V++ +I E K + + I
Sbjct: 353 EKVLKEMEGESLEANRRAFKDLLSIYASLGREDEVKRIWKI-CESKPYFEESLAA----I 407
Query: 219 HGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCS 278
+ K+ +V+EA +++ R +YS +++ Y + + SK +L+ M C
Sbjct: 408 QAFGKLNKVQEAEAIFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCR 467
Query: 279 PNVVTYTIIMCALAKAEKFDEALQVIER 306
T+ ++ +A + ++A ++++
Sbjct: 468 IEATTWDALIKLYVEAGEVEKADSLLDK 495
>AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 97/208 (46%), Gaps = 8/208 (3%)
Query: 102 NFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADA 161
N + S +Y +++D+ G + + +L+ M+ EG + T A R + GAG A
Sbjct: 293 NIKPSLLTYKILIDVKGATNDISGMEQILETMKDEGVELDFQTQALTARHYSGAGLKDKA 352
Query: 162 VRIFDDLQTLGLEKNTESMNLLLD---TLCKEEFVEQARQIYLELKQHIAPNAHTFNIFI 218
++ +++ LE N + LL +L +E+ V++ +I E K + + I
Sbjct: 353 EKVLKEMEGESLEANRRAFKDLLSIYASLGREDEVKRIWKI-CESKPYFEESLAA----I 407
Query: 219 HGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCS 278
+ K+ +V+EA +++ R +YS +++ Y + + SK +L+ M C
Sbjct: 408 QAFGKLNKVQEAEAIFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCR 467
Query: 279 PNVVTYTIIMCALAKAEKFDEALQVIER 306
T+ ++ +A + ++A ++++
Sbjct: 468 IEATTWDALIKLYVEAGEVEKADSLLDK 495
>AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 97/208 (46%), Gaps = 8/208 (3%)
Query: 102 NFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADA 161
N + S +Y +++D+ G + + +L+ M+ EG + T A R + GAG A
Sbjct: 293 NIKPSLLTYKILIDVKGATNDISGMEQILETMKDEGVELDFQTQALTARHYSGAGLKDKA 352
Query: 162 VRIFDDLQTLGLEKNTESMNLLLD---TLCKEEFVEQARQIYLELKQHIAPNAHTFNIFI 218
++ +++ LE N + LL +L +E+ V++ +I E K + + I
Sbjct: 353 EKVLKEMEGESLEANRRAFKDLLSIYASLGREDEVKRIWKI-CESKPYFEESLAA----I 407
Query: 219 HGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCS 278
+ K+ +V+EA +++ R +YS +++ Y + + SK +L+ M C
Sbjct: 408 QAFGKLNKVQEAEAIFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCR 467
Query: 279 PNVVTYTIIMCALAKAEKFDEALQVIER 306
T+ ++ +A + ++A ++++
Sbjct: 468 IEATTWDALIKLYVEAGEVEKADSLLDK 495
>AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:513607-515604 FORWARD
LENGTH=665
Length = 665
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 70/139 (50%), Gaps = 14/139 (10%)
Query: 35 SLMRSVDILTSKVAK-------GSSEEEIIRSLCNDQACDAIHLSPNLINILLRRYKDDW 87
S+ SVD + ++V K G+ E+ +R L + +++ ++L + D
Sbjct: 209 SMDNSVDKVCNRVCKIVMKEVWGADVEKQLRDL-------KLEFKSDVVKMVLEKLDVDP 261
Query: 88 KSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAK 147
+ AL F+W +F+H ++Y+ M +LG+ K +D+ + +++++R G + + T +
Sbjct: 262 RKALLFFRWIDESGSFKHDEKTYNAMARVLGKEKFLDRFQHMIEEIRSAGYEMEMETYVR 321
Query: 148 VMRRFVGAGQWADAVRIFD 166
V RF +AV +F+
Sbjct: 322 VSARFCQTKMIKEAVELFE 340
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 92/228 (40%), Gaps = 30/228 (13%)
Query: 96 WASLHSNFQHSPESYDMMVDILG---------RMKVMDKLRDLLDQMRCEG---SIITLN 143
W LH +P Y + +D + + ++D + +M G ++T
Sbjct: 161 WEFLHD----APSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYT 216
Query: 144 TIAKVMRR----FVGAGQWADAVRIFDDLQTL-GLEKNTESMNLLLDTLCKEEFVEQARQ 198
T+ + + +G G W +L L G + N + N+ + L A
Sbjct: 217 TLISALYKHERCVIGNGLW--------NLMVLKGCKPNLTTFNVRIQFLVNRRRAWDAND 268
Query: 199 IYLEL-KQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYC 257
+ L + K + P++ T+N+ I G+ R + A M G G +P + Y T+I C
Sbjct: 269 LLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLC 328
Query: 258 NEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
NF Y + + + PN+ T +++ L K + D+A ++E
Sbjct: 329 KAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIME 376
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 97/225 (43%), Gaps = 9/225 (4%)
Query: 87 WKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIA 146
W+SAL +F ++ ++Y + +LG K D+ L + M EG T++
Sbjct: 124 WQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYT 183
Query: 147 KVMRRFVGAGQWADAVRIFDDLQTL----GLEKNTESMNLLLDTLCKEEFVEQARQIYLE 202
++ + G + D + F L+ + + + + +L+ CK + + I LE
Sbjct: 184 SLISVY-GKSELLD--KAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLE 240
Query: 203 LKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYG-CRPCVISYSTIIQCYCNEQ 260
+ + + T+N I G+ K EE + +M G P V + ++II Y N +
Sbjct: 241 MSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGR 300
Query: 261 NFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
N K+ Q P++ T+ I++ + KA + + V++
Sbjct: 301 NMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMD 345
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 7/153 (4%)
Query: 157 QWADAVRIFDDLQTLG-LEKNTESMNLLLDTL--CKEEFVEQARQIY-LELKQHIAPNAH 212
+W A++IF+ L+ E ++ L L CK+ +QA ++ + L + + P
Sbjct: 123 RWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQP--DQASLLFEVMLSEGLKPTID 180
Query: 213 TFNIFIHGWCKIRRVEEAHWTIQEMKGYG-CRPCVISYSTIIQCYCNEQNFSKVYELLDE 271
+ I + K +++A T++ MK C+P V +++ +I C C F V ++ E
Sbjct: 181 VYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLE 240
Query: 272 MQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
M + VTY I+ KA F+E V+
Sbjct: 241 MSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVL 273
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 65/124 (52%), Gaps = 3/124 (2%)
Query: 183 LLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGC 242
L+D K V AR+++ +L + + FN I G+ + +EA +++MK G
Sbjct: 158 LIDMYSKFGEVGNARKVFSDLGEQ---DLVVFNAMISGYANNSQADEALNLVKDMKLLGI 214
Query: 243 RPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQ 302
+P VI+++ +I + + +N KV E+L+ M P+VV++T I+ L + ++A
Sbjct: 215 KPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFD 274
Query: 303 VIER 306
++
Sbjct: 275 AFKQ 278
>AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=1006
Length = 1006
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 69/139 (49%), Gaps = 7/139 (5%)
Query: 170 TLGLEKNTESMNLLLDTL---CKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRR 226
TLG + + + ++DT+ K++F + + + P+ +N ++ + ++
Sbjct: 552 TLGQAGHIKELFYVIDTMRSPPKKKFKPTTLEKW---DPRLEPDVVVYNAVLNACVQRKQ 608
Query: 227 VEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTI 286
E A W +Q++K G +P ++Y I++ + ++ V+E +MQ PN + Y +
Sbjct: 609 WEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSSI-PNALAYRV 667
Query: 287 IMCALAKAEKFDEALQVIE 305
++ L K K DEA+ +E
Sbjct: 668 LVNTLWKEGKSDEAVHTVE 686
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
Query: 152 FVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPN 210
++ G A +FD + KN + N L+ L ++ A + + + K+ I P+
Sbjct: 270 YIKTGYLPYARMVFDMMDA----KNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPD 325
Query: 211 AHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLD 270
A T+N G+ + + E+A I +MK G P V+S++ I NF ++
Sbjct: 326 AITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFI 385
Query: 271 EMQAQDCSPNVVTYTIIMCALA 292
+MQ + PN T + ++ L
Sbjct: 386 KMQEEGVGPNAATMSTLLKILG 407
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 84/170 (49%), Gaps = 3/170 (1%)
Query: 124 DKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLL 183
+K +L +M+ G+ +T+ K+++ +A+ +I + LGLE N N L
Sbjct: 71 EKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSL 130
Query: 184 LDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCR 243
+ + +E +R+++ +K N ++N + + K+ V++A + EM+ G +
Sbjct: 131 IVMYSRNGKLELSRKVFNSMKDR---NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLK 187
Query: 244 PCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAK 293
P ++++++++ Y ++ +L MQ P+ + + ++ A+A+
Sbjct: 188 PDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAE 237
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 98/207 (47%), Gaps = 9/207 (4%)
Query: 93 LFKWASL-HSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEG-SIITLNTIAKVMR 150
+F+WAS+ + F+H P++ ++M +L R ++ ++ LL +M G +++ ++
Sbjct: 132 IFRWASVQYQGFKHLPQACEIMASMLIREGMVKEVELLLMEMERHGDTMVNEGIFCDLIG 191
Query: 151 RFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAP- 209
++V AV +FD ++ GL T +L+D L + E A +I L+ + A
Sbjct: 192 KYVDDFDSRKAVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAEL 251
Query: 210 ---NAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVY 266
N + I C ++V+EA +++ GC YS I Y +Q+F +
Sbjct: 252 NHMNIDSIGKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLL 311
Query: 267 ELLDEMQAQDCSPNVVTYTIIMCALAK 293
+ E++ + P+V I+ +L +
Sbjct: 312 SFIGEVKYE---PDVFVGNRILHSLCR 335
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 139/327 (42%), Gaps = 49/327 (14%)
Query: 20 ASCGARGFRHQEQCQSLMRSVDILTSKVAKGSSEEEIIRSLCNDQACDAIHLSPNLINIL 79
AS +GF+H Q +M S+ I V +E+ L + ++ + L
Sbjct: 136 ASVQYQGFKHLPQACEIMASMLIREGMV------KEVELLLMEMERHGDTMVNEGIFCDL 189
Query: 80 LRRYKDDWKS--ALGLFKWASLHSNFQHSPESYDMMVDILGRM-KVMDKLRDLLD--QMR 134
+ +Y DD+ S A+ LF W Y +++D L R+ + R LD + R
Sbjct: 190 IGKYVDDFDSRKAVMLFDWMR-RKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETR 248
Query: 135 CEGSIITLNTIAKVM----------------RRFVGAG-----QWADAVRI-------FD 166
E + + +++I KV+ R+ V G + I F+
Sbjct: 249 AELNHMNIDSIGKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFE 308
Query: 167 DLQT----LGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIA--PNAHTFNIFIHG 220
DL + + E + N +L +LC+ F + +Y+E +H+ + TF I I G
Sbjct: 309 DLLSFIGEVKYEPDVFVGNRILHSLCRR-FGSERAYVYMEELEHLGFKQDEVTFGILI-G 366
Query: 221 WCKIRR-VEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSP 279
WC ++ A + E+ G +P V SY+ I+ + + + +LDEM+
Sbjct: 367 WCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMML 426
Query: 280 NVVTYTIIMCALAKAEKFDEALQVIER 306
++ T+ I++ KA +F+EA +++ +
Sbjct: 427 SLSTFKIMVTGYCKARQFEEAKRIVNK 453
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 74/149 (49%), Gaps = 15/149 (10%)
Query: 156 GQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFN 215
G+ DAV +FD++ E+N S N L+ L + +E+A+Q++ + + ++N
Sbjct: 152 GRSEDAVELFDEMP----ERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR---DVVSWN 204
Query: 216 IFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQ 275
I G+ + +EEA +M V+++++++ YC + + Y L EM +
Sbjct: 205 AMIKGYIENDGMEEAKLLFGDMS----EKNVVTWTSMVYGYCRYGDVREAYRLFCEMPER 260
Query: 276 DCSPNVVTYTIIMCALAKAEKFDEALQVI 304
N+V++T ++ A E + EAL +
Sbjct: 261 ----NIVSWTAMISGFAWNELYREALMLF 285
>AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2435007-2439344 REVERSE
LENGTH=821
Length = 821
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 4/178 (2%)
Query: 128 DLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTL 187
D++++M G +I+ + + ++ ++ RI + T ++ NTE+ ++
Sbjct: 394 DVVEKMGEAGLMISADILHSLLHAIDEVLEFDLVRRIHSIMCTKSVKPNTENFRSIIRLC 453
Query: 188 CKEEFVEQARQIYLELKQ-HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCV 246
+ + E A + LK ++ PN+ FN + G+ + + V A +++MK G +P
Sbjct: 454 TRIKDFEGAYNMLGNLKNFNLEPNSSMFNCILAGYFREKNVSSALMVVKQMKEAGVKPDS 513
Query: 247 ISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
I++ +I E +K YE EM+ Y ++ A A + KF++A QV+
Sbjct: 514 ITFGYLINNCTQEDAITKYYE---EMKQAGVQATKRIYMSLIDAYAASGKFEKAKQVL 568
>AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26596207-26598192 FORWARD
LENGTH=661
Length = 661
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 107/235 (45%), Gaps = 12/235 (5%)
Query: 79 LLRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGS 138
+LR ++ ++A F W ++ F H + + M+ +L R ++ + L+ ++R EG
Sbjct: 384 MLRNFRAP-ETAWSFFCWVAIQPGFTHDAYTIERMMAMLARNGQVELVDKLISKVRIEGI 442
Query: 139 IITLNTIAKVMRRFVGAGQWADAVRIFDDLQTL-GLEKNTESMNL---LLDTLCK----E 190
+ +TI ++ + + + A+++F++ +TL G + M L LL TL K
Sbjct: 443 KLPFSTIRLIIDLYGISKKPEAAIKVFNEDRTLCGSISDFNLMLLYSSLLRTLTKCKRNA 502
Query: 191 EFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYS 250
E +E + L ++P+ TF+ ++ + ++ ++ G P
Sbjct: 503 EALETLEDMML---TGVSPDIQTFSGLMYHFALQGEIQTVERLFSMVRQIGLEPDPYMLK 559
Query: 251 TIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
++Q YC + Y + +M+ + P+ T +++ +L + EK EA V E
Sbjct: 560 LLVQAYCRCERSVLAYRVFQDMKDSNLMPDRETKELLVKSLWREEKRKEAAAVEE 614
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 2/164 (1%)
Query: 142 LNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYL 201
L + +++ F Q + I +++ + + + N +LD L + V + +
Sbjct: 177 LIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLS 236
Query: 202 ELKQ--HIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNE 259
+K+ ++ N T+N ++G K R + EM G P ++SY+ +I
Sbjct: 237 TMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRS 296
Query: 260 QNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQV 303
N + L DEM+ + P+V Y ++ L K+ F ALQ+
Sbjct: 297 GNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQL 340
>AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:14320668-14322398 FORWARD
LENGTH=284
Length = 284
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 78/164 (47%), Gaps = 11/164 (6%)
Query: 146 AKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCK-----EEF----VEQA 196
K++R + G W A+ I ++++ +GL + E N ++DT K EE E
Sbjct: 89 GKIIRIYRDNGMWKKALGIVEEIREIGLPMDVEIYNSVIDTFGKYGELDEELQFGSFEDI 148
Query: 197 RQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQC 255
++ +LK Q +AP+A+ F + + + ++ ++ M+ G P +I + +I
Sbjct: 149 GELVGKLKSQGVAPSANLFCTLANAYAQQGLCKQTVKVLKMMENEGIEPNLIMLNVLINA 208
Query: 256 YCNEQNFSKVYELLDEMQAQD-CSPNVVTYTIIMCALAKAEKFD 298
+ + + ++ P+VVTY+ +M A +A+K++
Sbjct: 209 FGTAGKHMEALSIYHHIKETVWIHPDVVTYSTLMKAFTRAKKYE 252
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 14/151 (9%)
Query: 156 GQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFN 215
G+ A+A ++FD L E++ + ++ K + +AR+++ + N T+
Sbjct: 60 GKIAEARKLFDGLP----ERDVVTWTHVITGYIKLGDMREARELFDRVDSR--KNVVTWT 113
Query: 216 IFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQ 275
+ G+ + +++ A QEM V+S++T+I Y K EL DEM +
Sbjct: 114 AMVSGYLRSKQLSIAEMLFQEMP----ERNVVSWNTMIDGYAQSGRIDKALELFDEMPER 169
Query: 276 DCSPNVVTYTIIMCALAKAEKFDEALQVIER 306
N+V++ ++ AL + + DEA+ + ER
Sbjct: 170 ----NIVSWNSMVKALVQRGRIDEAMNLFER 196
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 183 LLDTLCKEEFVEQARQIY-LELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYG 241
+++ K+ +A ++Y +K+ T+ I I+ +C++ + +A EM G
Sbjct: 359 IVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKG 418
Query: 242 CRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
CV++YS I+ Y + S L+ +M+ + C PN+ Y ++
Sbjct: 419 FDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLI 465
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 89/187 (47%), Gaps = 14/187 (7%)
Query: 120 MKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTES 179
+ V+ + + ++++ I N + R G G DA+++F+ + E++T S
Sbjct: 133 LPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGV-RDAMKLFEKMS----ERDTVS 187
Query: 180 MNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKG 239
N +L L K + AR+++ E+ Q + ++N + G+ + R + +A ++M
Sbjct: 188 WNSMLGGLVKAGELRDARRLFDEMPQR---DLISWNTMLDGYARCREMSKAFELFEKMPE 244
Query: 240 YGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDE 299
+S+ST++ Y + + D+M + NVVT+TII+ A+ E
Sbjct: 245 RN----TVSWSTMVMGYSKAGDMEMARVMFDKMPLP--AKNVVTWTIIIAGYAEKGLLKE 298
Query: 300 ALQVIER 306
A +++++
Sbjct: 299 ADRLVDQ 305
>AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16983638-16986681 FORWARD
LENGTH=444
Length = 444
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Query: 197 RQIYLELK-QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQC 255
R +Y ++K + P A F+ F+ G K R+ +A + +EMK G P V Y+ +I
Sbjct: 61 RDVYDDMKLDGVQPTADIFHSFVVGTMKGARLSDAFFFREEMKAMGIAPDVNLYNFLIST 120
Query: 256 YCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+N + + DEM+ D PN T+ ++ A A + + D ++
Sbjct: 121 CGKCKNGKEAIRVYDEMKRYDVKPNGQTFVCLLNACAVSGQLDLVYAIV 169
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Query: 181 NLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGY 240
N L+D K +E AR+++ +K + +T+N I G+C+ +A+ M+
Sbjct: 391 NSLVDMYSKCGKLEDARKVFDSVKNK---DVYTWNSMITGYCQAGYCGKAYELFTRMQDA 447
Query: 241 GCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQD-CSPNVVTYTIIMCALAKAEKFDE 299
RP +I+++T+I Y + + +L M+ N T+ +I+ + K DE
Sbjct: 448 NLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDE 507
Query: 300 ALQVIER 306
AL++ +
Sbjct: 508 ALELFRK 514
>AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8183594-8185180 REVERSE
LENGTH=501
Length = 501
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/150 (20%), Positives = 72/150 (48%), Gaps = 3/150 (2%)
Query: 148 VMRRFVGAGQWADAVRIFDDLQTLGLEKNTES-MNLLLDTLCKEEFVEQARQIYLEL--K 204
V+R + + + + +FD + L + +E+ ++ LC+E+ + +A + + +
Sbjct: 101 VIRFLRQSSRLHEILPVFDTWKNLEPSRISENNYERIIRFLCEEKSMSEAIRAFRSMIDD 160
Query: 205 QHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSK 264
++P+ +N IH + + EEA + + MK G P +Y +I+ Y + + +
Sbjct: 161 HELSPSLEIYNSIIHSYADDGKFEEAMFYLNHMKENGLLPITETYDGLIEAYGKWKMYDE 220
Query: 265 VYELLDEMQAQDCSPNVVTYTIIMCALAKA 294
+ L M++ C + VTY +++ ++
Sbjct: 221 IVLCLKRMESDGCVRDHVTYNLLIREFSRG 250
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/240 (19%), Positives = 102/240 (42%), Gaps = 37/240 (15%)
Query: 102 NFQHSPESYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADA 161
+F S Y ++ I + ++ + +L +M G + T ++ + +G + A
Sbjct: 379 SFNASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERA 438
Query: 162 VRIFDDLQTLGL---EKNTESMNL---------LLDTLCKE---EFVEQARQIYLELKQH 206
F++L++ GL EK E+M L L + L KE + ++ + ++Y+ L +
Sbjct: 439 TEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRA 498
Query: 207 IAPNA----------------------HTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRP 244
A +++F+ + K +V++A EM+ G +P
Sbjct: 499 YAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKP 558
Query: 245 CVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAKAEKFDEALQVI 304
+ +++ Y E + K LL +++ V+TYT+++ +A +EA Q++
Sbjct: 559 DDKCIANLVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLL 618
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 84/191 (43%), Gaps = 3/191 (1%)
Query: 117 LGRMKVMDKLRDLLDQMRCEG-SIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTL-GLE 174
L R M+ RD M G ++T+ ++ V+ G+ A + +++ + G++
Sbjct: 184 LKRCDQMELARDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVK 243
Query: 175 KNTESMNLLLDTLCKE-EFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWT 233
N + ++ K +F E + L K+ + + ++ + I G+ +VEEA
Sbjct: 244 ANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERL 303
Query: 234 IQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMCALAK 293
+ M R Y+ I+ Y KV EL EM ++ +PN TY ++M L K
Sbjct: 304 VLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCK 363
Query: 294 AEKFDEALQVI 304
A K EA+ +
Sbjct: 364 AGKVCEAMSFL 374
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 87/198 (43%), Gaps = 9/198 (4%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
S++ ++ R+ M K + L M + T+ + ++ + G G + +A+ F ++
Sbjct: 177 SWNSLLSGYARLGQMKKAKGLFHLMLDK----TIVSWTAMISGYTGIGCYVEAMDFFREM 232
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLEL-KQHIAPNAHTFNIFIHGWCKIRRV 227
Q G+E + S+ +L + + +E + I+L ++ N I + K +
Sbjct: 233 QLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVI 292
Query: 228 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTII 287
+A +M+G VIS+ST+I Y N E +EMQ PN +T+ +
Sbjct: 293 SQAIQLFGQMEG----KDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGL 348
Query: 288 MCALAKAEKFDEALQVIE 305
+ A + + E L+ +
Sbjct: 349 LSACSHVGMWQEGLRYFD 366
>AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28617948-28622581 REVERSE
LENGTH=801
Length = 801
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 17/198 (8%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+++ + G + + ++L Q+ C I N I M R G + + L
Sbjct: 468 TYELLFSLFGNVNAPYEEGNMLSQVDCCKRI---NAIEMDMMR---NGFQHSPISRLNVL 521
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVE 228
+ LG E +N ++ L K E + +YL T+NI +H + +
Sbjct: 522 RALGAEG---MVNEMIRHLQKAENLSAHSNMYL--------GTPTYNIVLHSLLEANETD 570
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
+ MK GC V +Y+ +I C ++ L+ M SP VT+T +M
Sbjct: 571 MVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMIRDGFSPKAVTFTALM 630
Query: 289 CALAKAEKFDEALQVIER 306
L F+EAL ++++
Sbjct: 631 KILLNDANFEEALNLLDQ 648
>AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28617948-28622581 REVERSE
LENGTH=773
Length = 773
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 17/198 (8%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+++ + G + + ++L Q+ C I N I M R G + + L
Sbjct: 440 TYELLFSLFGNVNAPYEEGNMLSQVDCCKRI---NAIEMDMMR---NGFQHSPISRLNVL 493
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVE 228
+ LG E +N ++ L K E + +YL T+NI +H + +
Sbjct: 494 RALGAEG---MVNEMIRHLQKAENLSAHSNMYL--------GTPTYNIVLHSLLEANETD 542
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
+ MK GC V +Y+ +I C ++ L+ M SP VT+T +M
Sbjct: 543 MVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMIRDGFSPKAVTFTALM 602
Query: 289 CALAKAEKFDEALQVIER 306
L F+EAL ++++
Sbjct: 603 KILLNDANFEEALNLLDQ 620
>AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28618365-28622581 REVERSE
LENGTH=693
Length = 693
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 17/198 (8%)
Query: 109 SYDMMVDILGRMKVMDKLRDLLDQMRCEGSIITLNTIAKVMRRFVGAGQWADAVRIFDDL 168
+Y+++ + G + + ++L Q+ C I N I M R G + + L
Sbjct: 472 TYELLFSLFGNVNAPYEEGNMLSQVDCCKRI---NAIEMDMMR---NGFQHSPISRLNVL 525
Query: 169 QTLGLEKNTESMNLLLDTLCKEEFVEQARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVE 228
+ LG E +N ++ L K E + +YL T+NI +H + +
Sbjct: 526 RALGAEG---MVNEMIRHLQKAENLSAHSNMYL--------GTPTYNIVLHSLLEANETD 574
Query: 229 EAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIM 288
+ MK GC V +Y+ +I C ++ L+ M SP VT+T +M
Sbjct: 575 MVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMIRDGFSPKAVTFTALM 634
Query: 289 CALAKAEKFDEALQVIER 306
L F+EAL ++++
Sbjct: 635 KILLNDANFEEALNLLDQ 652
>AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:1258581-1260265 FORWARD
LENGTH=532
Length = 532
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 87/214 (40%), Gaps = 11/214 (5%)
Query: 80 LRRYKDDWKSALGLFKWASLHSNFQHSPESYDMMVDILGRMKVMDK----LRDLLDQMRC 135
LR+ K +K AL + +W + + + Y + +D++ +++ ++ D+ DQMR
Sbjct: 103 LRKIKR-YKHALEICEWMVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRG 161
Query: 136 EGSIITLNTIAKVMRRFVGAGQWADAVRIFDDLQTLGLEKNTESMNLLLDTLCKEEFVEQ 195
+ +L + +V A +F+ + G K+ N +L E+
Sbjct: 162 HAACTSL------LHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEK 215
Query: 196 ARQIYLELKQHIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQC 255
+ ELK +P+ T+N+++ + VE A + K P ++YS +
Sbjct: 216 VPVLIKELKIRTSPDIVTYNLWLTAFASGNDVEGAEKVYLKAKEEKLNPDWVTYSVLTNL 275
Query: 256 YCNEQNFSKVYELLDEMQAQDCSPNVVTYTIIMC 289
Y N K L EM+ N V Y ++
Sbjct: 276 YAKTDNVEKARLALKEMEKLVSKKNRVAYASLIS 309
>AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1918242-1919273 REVERSE
LENGTH=343
Length = 343
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 208 APNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCNEQNFSKVYE 267
+P+ T N + C + +++EA ++EM GC P V SY +I C + + V +
Sbjct: 168 SPDTGTCNYLVSSLCAVDKLDEAIKVVEEMSAAGCIPDVESYGAVINSLCLARKTTDVVK 227
Query: 268 LLDEMQAQ-DCSPNVVTYTIIMCALAKAEKFDEALQVIE 305
++ EM ++ SP T + AL + +A+++IE
Sbjct: 228 IVKEMVSKAGISPRKGMLTKVAAALRANREIWKAIEMIE 266