Miyakogusa Predicted Gene
- Lj0g3v0162139.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0162139.1 Non Chatacterized Hit- tr|E1ZNF1|E1ZNF1_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,27.55,2e-18,Hemerythrin,Haemerythrin/HHE cation-binding
motif; RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING,CUFF.10187.1
(551 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G18290.1 | Symbols: EMB2454, BTS | zinc finger protein-relate... 494 e-140
AT1G74770.1 | Symbols: | zinc ion binding | chr1:28089695-28094... 154 2e-37
AT1G18910.1 | Symbols: | zinc ion binding;zinc ion binding | ch... 153 4e-37
>AT3G18290.1 | Symbols: EMB2454, BTS | zinc finger protein-related |
chr3:6274308-6280174 FORWARD LENGTH=1254
Length = 1254
Score = 494 bits (1271), Expect = e-140, Method: Compositional matrix adjust.
Identities = 275/557 (49%), Positives = 360/557 (64%), Gaps = 13/557 (2%)
Query: 1 MMAEFLPWLASYISSDEHQDLLRCLGTVIPKEKLLHQVVFGWMKGQNIKCRSC-THNTEV 59
M+A FLPW++S IS DE +++ CL ++P EKLL QV+F W+ G++ SC ++
Sbjct: 209 MLAVFLPWISSSISVDESKEMQTCLKKIVPGEKLLQQVIFTWLGGKSNTVASCRIEDSMF 268
Query: 60 QWQEAGTSKLPSYNDEKAYGNCGPSKTVKRKWVELSEDPTNYTIACPLDELLLWHKAIKH 119
Q +S + + C SK KRK+ EL+ ++ T+ P+DE+ LWHK+I
Sbjct: 269 QCCLDSSSSMLPCKASREQCACEGSKIGKRKYPELTNFGSSDTLH-PVDEIKLWHKSINK 327
Query: 120 ELNDLAETARKIRLSEECSGLSSFNGRLQFISEVCIFHSIAEDKVIFPAVNAEIYLLQDH 179
E+ ++A+ ARKI+LS + S LS+F+ RLQ+I+EVCIFHS+AEDK+IFPAV+ E ++H
Sbjct: 328 EMKEIADEARKIQLSGDFSDLSAFDERLQYIAEVCIFHSLAEDKIIFPAVDGEFSFSEEH 387
Query: 180 ANEELQFDNLRCLIETIRSAGANPSP--EFFIRLSSHAEEIMNTILKHFENEETQVLPLA 237
EE QF+ RCLIE I+SAGA+ + EF+ +L SHA++IM TI +HF NEE QVLPLA
Sbjct: 388 DEEENQFNEFRCLIENIKSAGASSTSAAEFYTKLCSHADQIMETIQRHFHNEEIQVLPLA 447
Query: 238 RKLLSHQRQREVLYEGLCMMPLKLIECVLPWLVGSLNETEVRSFLQNMHMAAPASDHALV 297
RK S +RQ+E+LY+ LC+MPL+LIE VLPWL SL E E ++FL+N+ AP SD ALV
Sbjct: 448 RKNFSFKRQQELLYQSLCIMPLRLIERVLPWLTASLTEDEAKNFLKNLQAGAPKSDVALV 507
Query: 298 TLFSGWACNRHSMSSCFSSSVTGLCPARRL---MEMEITSLSFCLCEHTFSHCKKSPYVQ 354
TLFSGWAC C S + GLCP + L E+ + S + C S KS
Sbjct: 508 TLFSGWACKGRKAGECLSPNGNGLCPVKTLSNIKEVNLQSCNACASVPCTSRSTKSCCQH 567
Query: 355 QDSTNGHVGPVKHGNPETR-QDNDVSNLIITSETLNLPYNQSCCVPGLGLNPSHRGNGLL 413
QD V +T +V+N S +SCCVP LG+N + G L
Sbjct: 568 QDKRPAKRTAVLSCEKKTTPHSTEVANGCKPSGN-----GRSCCVPDLGVNNNCLELGSL 622
Query: 414 AQTKSLRALSDCPSAPFLNSSLFMWGTDIVSADNQFTTRPIDNIFKFHKAICIDLEYLDL 473
K++R+ S +AP LNSSLF+W D S RP+ IFKFHKAI DLE+LD+
Sbjct: 623 PAAKAMRSSSLNSAAPALNSSLFIWEMDSNSFGTGHAERPVATIFKFHKAISKDLEFLDV 682
Query: 474 ESGKLNDCDEIFIQQFTGRFFLLWGLYRAHSNAEDDIVFPALESKENLHNVSHSYTLDHQ 533
ESGKL DCD FI+QF GRF LLWG Y+AHSNAEDDI+FPALESKE LHNVSHSYTLDH+
Sbjct: 683 ESGKLIDCDGTFIRQFIGRFHLLWGFYKAHSNAEDDILFPALESKETLHNVSHSYTLDHK 742
Query: 534 QEDKLFLDISSGLTQLT 550
QE+KLF DI S LT+L+
Sbjct: 743 QEEKLFGDIYSVLTELS 759
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 14/215 (6%)
Query: 106 PLDELLLWHKAIKHELNDLAETARKIRLSEECSGLSSFNGRLQFISEVCIFHSIAEDKVI 165
P+ L +HKA+ EL L A + L R +F+ + H AED+VI
Sbjct: 54 PILIFLFFHKAVCSELEALHRLALEFATGHHVD-LRLLRERYRFLRSIYKHHCNAEDEVI 112
Query: 166 FPAVN------AEIYLLQDHANEELQFDNLRCLIETIRSAGANPSPEFFIR-LSSHAEEI 218
F A++ A+ Y L+ H E FD+L L+ + A + E + R L+ +
Sbjct: 113 FSALDIRVKNVAQTYSLE-HKGESNLFDHLFELLNS-----ATETDESYRRELARSTGAL 166
Query: 219 MNTILKHFENEETQVLPLARKLLSHQRQREVLYEGLCMMPLKLIECVLPWLVGSLNETEV 278
++ +H E+ QV PL + ++ Q +++ LC +P+ ++ LPW+ S++ E
Sbjct: 167 QTSVSQHLAKEQKQVFPLLIEKFKYEEQAYIVWRFLCSIPVNMLAVFLPWISSSISVDES 226
Query: 279 RSFLQNMHMAAPASDHALVTLFSGWACNRHSMSSC 313
+ + P +F+ ++++SC
Sbjct: 227 KEMQTCLKKIVPGEKLLQQVIFTWLGGKSNTVASC 261
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 445 ADNQFTTRPIDNIFKFHKAICIDLEYLDLESGKLNDCDEIFIQQFTGRFFLLWGLYRAHS 504
+D+ PI FHKA+C +LE L + + + ++ R+ L +Y+ H
Sbjct: 46 SDDAEEISPILIFLFFHKAVCSELEALHRLALEFATGHHVDLRLLRERYRFLRSIYKHHC 105
Query: 505 NAEDDIVFPALESKENLHNVSHSYTLDHQQEDKLF 539
NAED+++F AL+ + + NV+ +Y+L+H+ E LF
Sbjct: 106 NAEDEVIFSALDIR--VKNVAQTYSLEHKGESNLF 138
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 95/235 (40%), Gaps = 47/235 (20%)
Query: 106 PLDELLLWHKAIKHELNDL-AETARKIRLSEECSG--LSSFNGRLQFISEVCIFHSIAED 162
P+ + +HKAI +L L E+ + I +C G + F GR + HS AED
Sbjct: 662 PVATIFKFHKAISKDLEFLDVESGKLI----DCDGTFIRQFIGRFHLLWGFYKAHSNAED 717
Query: 163 KVIFPAVNAEIYLLQ-------DHANEELQFDNLRCLI---------------------- 193
++FPA+ ++ L DH EE F ++ ++
Sbjct: 718 DILFPALESKETLHNVSHSYTLDHKQEEKLFGDIYSVLTELSILHEKLQSDSMMEDIAQT 777
Query: 194 ETIRSAGANPS-----PEFFIRLSSHAEEIMNTILKHFENEETQVLPLARKLLSHQRQRE 248
+T+R+ N E +L + I T+ +H EE ++ PL K S Q Q +
Sbjct: 778 DTVRTDIDNGDCNKKYNELATKLQGMCKSIKITLDQHIFLEELELWPLFDKHFSIQEQDK 837
Query: 249 VLYEGLCMMPLKLIECVLPWLVGSLNETEVRSFLQNMHMAAPASDHALVTLFSGW 303
++ + ++++ +LPW+ +L+E E + A T+F W
Sbjct: 838 IVGRIIGTTGAEVLQSMLPWVTSALSEDEQNRMMDTWKQATKN------TMFDEW 886
>AT1G74770.1 | Symbols: | zinc ion binding | chr1:28089695-28094834
REVERSE LENGTH=1259
Length = 1259
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 138/562 (24%), Positives = 247/562 (43%), Gaps = 53/562 (9%)
Query: 1 MMAEFLPWLASYISSDEHQDLLRCLGTVIPKEKLLHQVVFGWMKGQNIKCRSCTHNTEVQ 60
++ +FLPW+ S++S +E ++ C+ V P E L QV+ W+ + SC TE+
Sbjct: 194 VLEDFLPWMISHLSHEEKIEVENCIKDVAPNEDSLQQVISSWLLDDSQS--SCGTPTEIM 251
Query: 61 WQEAGTSKLPSYNDEKAYGNCGPSKTVKRKWVELSEDPTNY--TIACPLDELLLWHKAIK 118
G + K PS +++ E S+ + P+ L L+ AI+
Sbjct: 252 ---KGVQYVNVSKSLKKSPESHPSSGCFQRFWEWSKKSLSIPNVGRSPIHGLRLFQNAIE 308
Query: 119 HELNDLAETARKIRLSEECSGLSSFNGRLQFISEVCIFHSIAEDKVIFPAVNAEIYLLQD 178
+L D+ E + + L RL F+++V + +S A K P + +
Sbjct: 309 KDLRDIQEGLCQAKFQTLILDLDVLMARLNFLADVLVSYSNAFKKFFHPVLEE---MTAR 365
Query: 179 HANEELQFDNLRCLIETIR-----SAGANPSPEFFIRLSSHAEEIMNTILKHFENEETQV 233
++ QF+ CL R + + F ++L E ++ + K F + T+V
Sbjct: 366 RSSTAKQFNIDDCLENFQRLLYKSADDKTKTDNFLLQLQEELESLIIQVTKQFAIQRTEV 425
Query: 234 LPLARKLLSHQRQREVLYEGLCMMPLKLIECVLPWLVGSLNETEVRSFLQNMHMAAPASD 293
P+ K +H+ Q+++LY + ++PL L++CV+ W L+E E +S L + + +
Sbjct: 426 FPIISKNCNHEMQKQLLYTSIHVLPLGLLKCVILWFSAHLSEEESQSILHFLSLEDSSPK 485
Query: 294 HALVTLFSGWACNRHSMSSCFSSSVTGLCPARRLMEMEITSLSFCLCEHTFSHCKKSPYV 353
+ L W R S +SV R ++++ C C+ H +++
Sbjct: 486 KSFPRLLLQWL--RFGYSG--KTSV-----ERFWKQLDVMFKVRCSCQK--EHTEEASGS 534
Query: 354 QQDSTNGHVGPVKHGNPETRQDND----VSNLIITSETLNLPYNQSCCVPGLGLNPSHRG 409
+ T + V ++D +S + + PY S R
Sbjct: 535 FSNQTQLQLCKVSKDVYPRKKDKSSTCFMSMDLAVGDMYETPY-------------SSRM 581
Query: 410 NGLLAQTKSLRALSDCPSAPFLNSSLFMWGTDIVSADNQFTTRPIDNIFKFHKAICIDLE 469
N + + L+ P +G + +PID +F FHKA+ +DL+
Sbjct: 582 NQQMTFSGKLKPPLHLPD---------FFGEKNMDDPMIMDVKPIDLLFFFHKAMKMDLD 632
Query: 470 YLDLESGKLNDCDEIFIQQFTGRFFLLWGLYRAHSNAEDDIVFPALESKENLHNVSHSYT 529
YL S +L D F+ +F RF ++ LY+ HS+AED+I FPALE+K L N+SHS++
Sbjct: 633 YLVCGSTRLA-ADFRFLAEFQQRFHMIKFLYQIHSDAEDEIAFPALEAKGQLKNISHSFS 691
Query: 530 LDHQQEDKLFLDISSGLTQLTQ 551
+DH+ E K F +S L ++++
Sbjct: 692 IDHELETKHFDKVSFILNEMSE 713
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 109/233 (46%), Gaps = 26/233 (11%)
Query: 92 VELSEDPTNYTIACPLDELLLWHKAIKHELNDLAETARKIRLSEECSG--LSSFNGRLQF 149
+LS+ P + + C HKA + +L +L A ++ SG + + +F
Sbjct: 27 TKLSDAPVLFFVYC--------HKAFRAQLVELRRFATDAAEADSFSGDLAVELSRKFEF 78
Query: 150 ISEVCIFHSIAEDKVIFPAVNAEI------YLLQDHANEEL---QFDNLRCLIETIRSAG 200
+ V +HS AED+VIF A++ + Y L+ ++L F L L E I S
Sbjct: 79 LKLVYKYHSAAEDEVIFLALDKRVKNIVSNYSLEHAGTDDLFTSIFHWLHVLEEEIGSR- 137
Query: 201 ANPSPEFFIRLSSHAEEIMNTILKHFENEETQVLPLARKLLSHQRQREVLYEGLCMMPLK 260
++ E + + + I ++I +H EE QV PL + S + Q ++++ +C +P+
Sbjct: 138 SDVLREVILCIGT----IQSSICQHMLKEERQVFPLLIEKFSFREQASLVWQFICSVPVM 193
Query: 261 LIECVLPWLVGSLNETEVRSFLQNMHMAAPASDHALVTLFSGWACNRHSMSSC 313
++E LPW++ L+ E + AP D +L + S W + S SSC
Sbjct: 194 VLEDFLPWMISHLSHEEKIEVENCIKDVAPNED-SLQQVISSWLLD-DSQSSC 244
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 25/204 (12%)
Query: 96 EDPTNYTIACPLDELLLWHKAIKHELNDLAETARKIRLSEECSGLSSFNGRLQFISEVCI 155
+DP + P+D L +HKA+K +L+ L RL+ + L+ F R I +
Sbjct: 607 DDPMIMDVK-PIDLLFFFHKAMKMDLDYLV--CGSTRLAADFRFLAEFQQRFHMIKFLYQ 663
Query: 156 FHSIAEDKVIFPAVNAEIYLLQ-------DHANEELQFDN----------LRCLIETIRS 198
HS AED++ FPA+ A+ L DH E FD L L+ TI +
Sbjct: 664 IHSDAEDEIAFPALEAKGQLKNISHSFSIDHELETKHFDKVSFILNEMSELNMLVSTINT 723
Query: 199 AGANPSPEF-FIRLSSHAEEIMNTILK----HFENEETQVLPLARKLLSHQRQREVLYEG 253
A+ + + RL EI ++ K H ++EET++ L R S + Q +++
Sbjct: 724 TAADHDRKMKYERLCLSLREICKSMHKLLSEHIQHEETELWGLFRNCFSIEEQEKIIGCM 783
Query: 254 LCMMPLKLIECVLPWLVGSLNETE 277
L + ++++ ++PWL+ SL E
Sbjct: 784 LGRISGEILQDMIPWLMESLTSDE 807
>AT1G18910.1 | Symbols: | zinc ion binding;zinc ion binding |
chr1:6532706-6537993 REVERSE LENGTH=1254
Length = 1254
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 145/563 (25%), Positives = 233/563 (41%), Gaps = 68/563 (12%)
Query: 1 MMAEFLPWLASYISSDEHQDLLRCLGTVIPKEKLLHQVVFGWMKGQNIKCRSCTHNTEVQ 60
++ E PW+ S +S E ++ C V+P E L V+ W+ + S T T++
Sbjct: 202 VLEEIFPWMTSLLSPKEKSEVETCFKEVVPNELSLQLVINSWLIDDSQS--SLTALTKIM 259
Query: 61 WQEAGTSKLPSYNDEKAYGNCGPSKTVKRKW-----VELSEDPTNYTIACPLDELLLWHK 115
+ S S N + N S +R W + S T + + + + LWH
Sbjct: 260 --KGVQSVEVSENMTNSQTNSSSSGVFQRFWQWSKKMSFSSPNTGHIL---VHGIHLWHN 314
Query: 116 AIKHELNDLAETARKIRLSEECSGLSSFNGRLQFISEVCIFHSIAEDKVIFPAVNAEIYL 175
AI+ +L D+ + ++ L+ RL F+++V IF+S A +P E +
Sbjct: 315 AIRKDLVDIQKGLCQLTFPSLSLDLNVLVVRLNFLADVLIFYSNAFKTFFYPVF--EDMV 372
Query: 176 LQDHANEELQF------DNLRCLIETIRSAGANPSPEFFIRLSSHAEEIMNTILKHFENE 229
Q H++ QF +N + ++ AG++ F I L E ++ T+ K F E
Sbjct: 373 DQQHSSSSKQFTIDGHVENFKKSLDLETRAGSD---NFVITLQEKLESLILTVAKQFSIE 429
Query: 230 ETQVLPLARKLLSHQRQREVLYEGLCMMPLKLIECVLPWLVGSLNETEVRSFLQNMHMAA 289
ET+V P+ K + + QR++LY + +PL L++CV+ W L E E +S + +
Sbjct: 430 ETEVFPIISKNCNIEMQRQLLYRSIHFLPLGLLKCVIMWFSAQLPEDECQSIIHYLSSED 489
Query: 290 PASDHALVTLFSGWACNRHSMSSCFSSSVTGLCPARRLM-EMEITSLSFCLCEHTFSHCK 348
+ L W F +G P E+ C E +
Sbjct: 490 SFPNKPFAHLLLQW----------FRFGYSGKTPVESFWNELSFMFKPRCSFEEELTEEA 539
Query: 349 KSPYVQQDSTNGHVGPVKHGNPETRQDNDVSNLIITSETLNLPYNQSCCVPGLGLNPSHR 408
+ QQ P K D + + NQ +PG
Sbjct: 540 SGSFFQQ-------SPQKLFKVSDPYSMDPPAGYMNETPYSSAMNQQILIPG-------- 584
Query: 409 GNGLLAQTKSLRALSDCPSAPFLNSSLFMWGTDIVSADNQFTTRPIDNIFKFHKAICIDL 468
LR L P ++G + +PID IF FHKA+ DL
Sbjct: 585 ---------KLRPLLHLPD---------LFGDKTIGEHLTMDLKPIDLIFYFHKAMKKDL 626
Query: 469 EYLDLESGKLNDCDEIFIQQFTGRFFLLWGLYRAHSNAEDDIVFPALESKENLHNVSHSY 528
+YL S +L D F+ +F RF L+ LY+ HS+AED+I FPALE+K L N+S SY
Sbjct: 627 DYLVRGSARLAT-DYSFLGEFQQRFHLIKFLYQIHSDAEDEIAFPALEAKGKLQNISQSY 685
Query: 529 TLDHQQEDKLFLDISSGLTQLTQ 551
++DH+ E + +S L +L +
Sbjct: 686 SIDHELEVEHLNKVSFLLNELAE 708
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 88/181 (48%), Gaps = 15/181 (8%)
Query: 106 PLDELLLWHKAIKHELNDLAETA-RKIRLSEECSGLSSFNGRLQFISEVCIFHSIAEDKV 164
P+ + +HKA + +L +L A +R + + + +F+ V +HS AED+V
Sbjct: 44 PILLFVYFHKAFRAQLAELQFLAGDTVRSGSDLA--VELRSKFEFLKLVYKYHSAAEDEV 101
Query: 165 IFPAVNAEI------YLLQDHANEELQFDNLRCL--IETIRSAGANPSPEFFIRLSSHAE 216
IF A++ + Y L+ A ++L L +E + A+ E + + +
Sbjct: 102 IFSALDTRVKNIVFNYSLEHDATDDLFTSVFHWLNVLEEEQGNRADVLREVVLCIGT--- 158
Query: 217 EIMNTILKHFENEETQVLPLARKLLSHQRQREVLYEGLCMMPLKLIECVLPWLVGSLNET 276
I ++I +H EE QV PL + S + Q ++++ +C +P+ ++E + PW+ L+
Sbjct: 159 -IQSSICQHMLKEERQVFPLMIENFSFEEQASLVWQFICSVPVMVLEEIFPWMTSLLSPK 217
Query: 277 E 277
E
Sbjct: 218 E 218
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 22/212 (10%)
Query: 106 PLDELLLWHKAIKHELNDLAETARKIRLSEECSGLSSFNGRLQFISEVCIFHSIAEDKVI 165
P+D + +HKA+K +L+ L + RL+ + S L F R I + HS AED++
Sbjct: 611 PIDLIFYFHKAMKKDLDYLVRGS--ARLATDYSFLGEFQQRFHLIKFLYQIHSDAEDEIA 668
Query: 166 FPAVNAEIYLLQ-------DHANEELQFDNLRCLIETIRSAGA---NPSPEFFIRLSSHA 215
FPA+ A+ L DH E + + L+ + + + +L
Sbjct: 669 FPALEAKGKLQNISQSYSIDHELEVEHLNKVSFLLNELAELNMLVLDHKNVKYEKLCMSL 728
Query: 216 EEIMNTILK----HFENEETQVLPLARKLLSHQRQREVLYEGLCMMPLKLIECVLPWLVG 271
++I +I K H EET++ L R + + Q +++ L + ++++ ++PWL+
Sbjct: 729 QDICKSIHKLLSEHLHREETELWCLFRDCFTIEEQEKIIACMLGRISGEILQDMIPWLME 788
Query: 272 SLNETEVRSFLQNMHMAAPASDHALVTLFSGW 303
SL E + + A T+F W
Sbjct: 789 SLIPDEQHAVMSLWRQATRK------TMFGEW 814