Miyakogusa Predicted Gene

Lj0g3v0161909.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0161909.1 Non Chatacterized Hit- tr|B9RSQ8|B9RSQ8_RICCO
Amine oxidase [copper-containing], putative
OS=Ricinus,36.03,4e-18,Amine oxidase N-terminal region,Copper amine
oxidase, N-terminal; no description,Copper amine
oxidas,NODE_80857_length_883_cov_10.083805.path1.1
         (136 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G12290.1 | Symbols:  | Copper amine oxidase family protein | ...   146   3e-36
AT4G12270.1 | Symbols:  | Copper amine oxidase family protein | ...   143   4e-35
AT3G43670.1 | Symbols:  | Copper amine oxidase family protein | ...   131   1e-31
AT1G62810.1 | Symbols:  | Copper amine oxidase family protein | ...   125   7e-30
AT1G31710.1 | Symbols:  | Copper amine oxidase family protein | ...    77   2e-15
AT4G14940.1 | Symbols: ATAO1, AO1 | amine oxidase 1 | chr4:85418...    68   2e-12
AT1G31670.1 | Symbols:  | Copper amine oxidase family protein | ...    64   2e-11
AT1G31690.1 | Symbols:  | Copper amine oxidase family protein | ...    64   4e-11

>AT4G12290.1 | Symbols:  | Copper amine oxidase family protein |
           chr4:7304434-7306973 FORWARD LENGTH=741
          Length = 741

 Score =  146 bits (369), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 63/121 (52%), Positives = 87/121 (71%), Gaps = 1/121 (0%)

Query: 16  NKEFNRTISQRGVNMADLICLPVSSGWYGTPVEENTRFIKVQCFSKEGTVNFYMKPIEGV 75
           N +FNRTI  RGVN+ D+IC P+S GW+G   EEN R IK QCF  +GT NFYM+PIEG+
Sbjct: 192 NADFNRTIISRGVNLTDVICFPISCGWFGNK-EENARVIKSQCFMTQGTPNFYMRPIEGL 250

Query: 76  VVLVDMDRKEVVSISENGKNIPVAKGINTDYRYSIQKLNGEFKLVNPISLEQPKGPSFTV 135
            +L+D+D K+V+ I++ G+ IP+    NTDYR+       + + +NPIS+EQP+GPSF +
Sbjct: 251 TILIDLDTKQVIEITDTGRAIPIPGSTNTDYRFQKLATTDKTRPLNPISIEQPRGPSFVI 310

Query: 136 E 136
           E
Sbjct: 311 E 311


>AT4G12270.1 | Symbols:  | Copper amine oxidase family protein |
           chr4:7297808-7299930 FORWARD LENGTH=460
          Length = 460

 Score =  143 bits (360), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 61/121 (50%), Positives = 88/121 (72%)

Query: 16  NKEFNRTISQRGVNMADLICLPVSSGWYGTPVEENTRFIKVQCFSKEGTVNFYMKPIEGV 75
           N +FNRTI+ RGVN+ D+IC+P+SSGW+G   +   R  K+QCFS + T NFYM+PIEG+
Sbjct: 194 NADFNRTINSRGVNLTDVICIPISSGWFGNKDDNTKRVTKIQCFSTQDTPNFYMRPIEGL 253

Query: 76  VVLVDMDRKEVVSISENGKNIPVAKGINTDYRYSIQKLNGEFKLVNPISLEQPKGPSFTV 135
            +L D+D K ++ I++ G++IP+    NTDYRYS    + + + +N ISLEQP+GPSF +
Sbjct: 254 TLLFDLDTKRILEITDTGQSIPIPGSTNTDYRYSTLPNHDKTRPLNTISLEQPRGPSFVI 313

Query: 136 E 136
           E
Sbjct: 314 E 314


>AT3G43670.1 | Symbols:  | Copper amine oxidase family protein |
           chr3:15567144-15569734 FORWARD LENGTH=687
          Length = 687

 Score =  131 bits (329), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 64/122 (52%), Positives = 83/122 (68%), Gaps = 2/122 (1%)

Query: 15  KNKEFNRTISQRGVNMADLICLPVSSGWYGTPVEENTRFIKVQCFSKEGTVNFYMKPIEG 74
           K+ EFNR+I  RG+  + LIC+   +GWYG P EE  R IK+QCFSK+ TVNFYM+PIEG
Sbjct: 149 KSVEFNRSIEARGIPFSGLICITPFAGWYG-PDEEGRRVIKIQCFSKQDTVNFYMRPIEG 207

Query: 75  VVVLVDMDRKEVVSISENGKNIPVAKGINTDYRYSIQKLNGEFKLVNPISLEQPKGPSFT 134
           + + VDMD+ E++ I +NG  +PV K   T+YRY           VNP+S+EQP GPSF 
Sbjct: 208 LYLTVDMDKLEIIKIVDNGP-VPVPKSTGTEYRYGFLNETVYMDRVNPMSMEQPDGPSFQ 266

Query: 135 VE 136
           VE
Sbjct: 267 VE 268


>AT1G62810.1 | Symbols:  | Copper amine oxidase family protein |
           chr1:23258253-23261772 REVERSE LENGTH=712
          Length = 712

 Score =  125 bits (315), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 58/122 (47%), Positives = 83/122 (68%), Gaps = 2/122 (1%)

Query: 15  KNKEFNRTISQRGVNMADLICLPVSSGWYGTPVEENTRFIKVQCFSKEGTVNFYMKPIEG 74
           K+ EFNR+I  RGV  +DL C+   +GW+G+  EE  R I+VQCF+ +GT N++M+P+EG
Sbjct: 168 KSLEFNRSIEARGVKFSDLACITPFAGWFGSE-EEGRRVIRVQCFTLQGTTNYFMRPLEG 226

Query: 75  VVVLVDMDRKEVVSISENGKNIPVAKGINTDYRYSIQKLNGEFKLVNPISLEQPKGPSFT 134
           + V VD+D+ EV+ I + G  IP+ K   T+YR+ +Q        +NPIS+EQP GPSF 
Sbjct: 227 LYVTVDLDKLEVIKIIDKGP-IPIPKASGTEYRFGVQNKPVHMDRINPISMEQPDGPSFR 285

Query: 135 VE 136
           VE
Sbjct: 286 VE 287


>AT1G31710.1 | Symbols:  | Copper amine oxidase family protein |
           chr1:11349855-11355339 FORWARD LENGTH=681
          Length = 681

 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 74/125 (59%), Gaps = 8/125 (6%)

Query: 15  KNKEFNRTISQRGVNMADLICLPVSSGWYGTPVEENTRFIKVQCFSKEGTVNFYMKPIEG 74
           K K F  ++++RG+N+++++    + GWYG    E  R I++  F  +GTVN Y++PIEG
Sbjct: 140 KFKPFIDSVAKRGLNVSEIVFTTSTIGWYGETKAEAERVIRLMPFYLDGTVNMYLRPIEG 199

Query: 75  VVVLVDMDRKEVVSISENG-KNIPVAKGINTDYRYSIQKLNGEF--KLVNPISLEQPKGP 131
           + ++V++D  +V    +     +P+A G  T+YR  I KLN  F   L N + L QP GP
Sbjct: 200 MTIIVNLDEMKVSEFKDRSVVTMPIANG--TEYR--ISKLNPPFGPTLHNAVLL-QPDGP 254

Query: 132 SFTVE 136
            F V+
Sbjct: 255 GFKVD 259


>AT4G14940.1 | Symbols: ATAO1, AO1 | amine oxidase 1 |
           chr4:8541879-8544304 FORWARD LENGTH=650
          Length = 650

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/89 (32%), Positives = 53/89 (59%), Gaps = 3/89 (3%)

Query: 19  FNRTISQRGVNMADLICLPVSSGWYGTPVEENTRFIKVQCFSKEGTVNFYMKPIEGVVVL 78
           F ++I  R +N++++ C+P + GWYG       R +K  CF ++G+VN + +PIEG+ V 
Sbjct: 139 FKKSILDRSLNISEVSCIPFTVGWYGETTTR--RELKASCFYRDGSVNVFTRPIEGITVT 196

Query: 79  VDMDRKEVVSISENGKNIPVAKGINTDYR 107
           +D+D  +V+  S+  +  P+      D+R
Sbjct: 197 IDVDSMQVIKYSDRFRK-PIPDKEGNDFR 224


>AT1G31670.1 | Symbols:  | Copper amine oxidase family protein |
           chr1:11337558-11341889 FORWARD LENGTH=741
          Length = 741

 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 73/125 (58%), Gaps = 10/125 (8%)

Query: 15  KNKEFNRTISQRGVNMADLICLPVSSGWYGTPVEENTRFIKVQCFSKEGTVNFYMKPIEG 74
           K K F  +I +RG+N+++++    + GW+G    E  R IK + F   G+VN Y++PIEG
Sbjct: 219 KFKPFRDSIRRRGLNVSEVVVTTSTMGWFGEAKPE--RLIKKRPFYLNGSVNTYLRPIEG 276

Query: 75  VVVLVDMDRKEVVSISENGKN-IPVAKGINTDYRYSIQKLNGEF--KLVNPISLEQPKGP 131
           + ++V++D+ +V    +   + +P AKG  T++R  I KL   F   L N + L Q +GP
Sbjct: 277 MTIIVNLDQMKVTKFRDRFTSPLPNAKG--TEFR--ISKLKPPFGPSLQNAV-LFQSEGP 331

Query: 132 SFTVE 136
            F ++
Sbjct: 332 GFKID 336


>AT1G31690.1 | Symbols:  | Copper amine oxidase family protein |
           chr1:11343980-11347767 FORWARD LENGTH=677
          Length = 677

 Score = 63.5 bits (153), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 6/123 (4%)

Query: 15  KNKEFNRTISQRGVNMADLICLPVSSGWYGTPVEENTRFIKVQCFSKEGTVNFYMKPIEG 74
           K K F  +I +RG+N+++++    + GW+G    +  RFI+   F   G+VN Y++PIEG
Sbjct: 139 KYKPFCDSIIKRGLNLSEVVVTSSTMGWFGE--TKTKRFIRTIPFYLNGSVNTYLRPIEG 196

Query: 75  VVVLVDMDRKEVVSISENGKNIPVAKGINTDYRYSIQKLNGEF-KLVNPISLEQPKGPSF 133
           + ++V++D+ +V    +     P+ K    +YR  I KL   F   +    + QP GP F
Sbjct: 197 MTIIVNLDQMKVTGFKDRFTG-PMPKANGREYR--ISKLKPPFGPSLRSAVVFQPDGPGF 253

Query: 134 TVE 136
            ++
Sbjct: 254 KID 256