Miyakogusa Predicted Gene

Lj0g3v0161599.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0161599.1 Non Chatacterized Hit- tr|H9BX05|H9BX05_9BACT
Putative uncharacterized protein OS=uncultured
bacteri,44.44,3e-19,DUF393,Putative thiol-disulphide oxidoreductase
DCC,CUFF.10035.1
         (216 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G52590.1 | Symbols:  | Putative thiol-disulphide oxidoreducta...   246   8e-66
AT1G24095.1 | Symbols:  | Putative thiol-disulphide oxidoreducta...    79   3e-15

>AT1G52590.1 | Symbols:  | Putative thiol-disulphide oxidoreductase
           DCC | chr1:19589224-19590231 REVERSE LENGTH=172
          Length = 172

 Score =  246 bits (628), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 121/175 (69%), Positives = 143/175 (81%), Gaps = 3/175 (1%)

Query: 31  MALLLPPSAAVGRFSSTVSSLRPRKLNNTFATLSQTRSEEANWVEATSSFFDQDKRPIML 90
           MA+L+P  A+ GR + T S  + R   +  A     R +  +WV+ TSSFF++DKRPIML
Sbjct: 1   MAILIP--ASFGRLTIT-SRAQVRVRVSASANQRTIRRDSVDWVKETSSFFEEDKRPIML 57

Query: 91  FDGVGNLCNGGVKFVRDNDRNKTIRYEPLQSEAGKMLLRRSGRAPDDISSVVLVENDRSY 150
           FDGV NLCNGGVKFVRD+DRN++IR+E LQSEAGK LL RSGRAPDDISSVVLVENDRSY
Sbjct: 58  FDGVCNLCNGGVKFVRDHDRNRSIRFEALQSEAGKKLLLRSGRAPDDISSVVLVENDRSY 117

Query: 151 IKSEAVLKIMEYIDFPFPQLAFLVQFVPLFIRDFAYDNVANNRYTIFGRSESCEI 205
           IKSEAVLKIM+YID PFPQLAF +QF PLF+RDF Y+NVANNRY +FGRS+SCE+
Sbjct: 118 IKSEAVLKIMKYIDLPFPQLAFFLQFAPLFVRDFLYENVANNRYAMFGRSDSCEL 172


>AT1G24095.1 | Symbols:  | Putative thiol-disulphide oxidoreductase
           DCC | chr1:8523345-8524690 FORWARD LENGTH=213
          Length = 213

 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 72/121 (59%), Gaps = 5/121 (4%)

Query: 88  IMLFDGVGNLCNGGVKFVRDNDRNKTIRYEPLQSEAGKMLLRRSGRAPDDISSVVL-VEN 146
           ++++DGV +LC+GGVK++   D+ + I++  LQS+A +  L  SG   +D+    L +E 
Sbjct: 75  VVVYDGVCHLCHGGVKWIIKADKYRKIKFCCLQSKAAEPYLEVSGVTREDVQKRFLFIEG 134

Query: 147 DRSYIK-SEAVLKIMEYIDFPFPQL-AFLVQFVPLFIRDFAYDNVANNRYTIFGRSESCE 204
              Y + S A L+++ Y+  P+  L AF    VP  +RD  YD VA NRY  FG++E C 
Sbjct: 135 LGFYHQASTAALRVVSYLPLPYSALNAF--SIVPTPLRDSVYDYVAKNRYDWFGKAEDCL 192

Query: 205 I 205
           +
Sbjct: 193 V 193