Miyakogusa Predicted Gene

Lj0g3v0160879.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0160879.1 Non Chatacterized Hit- tr|I1MRN2|I1MRN2_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,88.52,0,no
description,NULL; Response_reg,Signal transduction response regulator,
receiver domain; cheY-homo,CUFF.9984.1
         (185 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G16857.1 | Symbols: ARR1, RR1 | response regulator 1 | chr3:5...   273   4e-74
AT3G16857.2 | Symbols: ARR1, RR1 | response regulator 1 | chr3:5...   273   6e-74
AT4G16110.1 | Symbols: ARR2, RR2 | response regulator 2 | chr4:9...   268   1e-72
AT2G25180.1 | Symbols: ARR12, RR12 | response regulator 12 | chr...   204   2e-53
AT1G67710.1 | Symbols: ARR11 | response regulator 11 | chr1:2537...   199   6e-52
AT4G31920.1 | Symbols: ARR10, RR10 | response regulator 10 | chr...   192   1e-49
AT2G01760.1 | Symbols: ARR14, RR14 | response regulator 14 | chr...   189   7e-49
AT5G58080.1 | Symbols: ARR18, RR18 | response regulator 18 | chr...   151   3e-37
AT5G49240.1 | Symbols: APRR4, PRR4 | pseudo-response regulator 4...   126   1e-29
AT1G49190.1 | Symbols: ARR19, RR19 | response regulator 19 | chr...   120   6e-28
AT1G49190.2 | Symbols: RR19 | response regulator 19 | chr1:18191...   120   7e-28
AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | pseudo-response regula...   101   3e-22
AT5G24470.1 | Symbols: APRR5, PRR5 | pseudo-response regulator 5...    97   7e-21
AT5G60100.3 | Symbols: PRR3 | pseudo-response regulator 3 | chr5...    94   5e-20
AT5G60100.1 | Symbols: APRR3, PRR3 | pseudo-response regulator 3...    94   5e-20
AT5G02810.1 | Symbols: PRR7, APRR7 | pseudo-response regulator 7...    94   6e-20
AT5G60100.2 | Symbols: PRR3 | pseudo-response regulator 3 | chr5...    94   6e-20
AT3G62670.1 | Symbols: ARR20, MEE41, RR20 | response regulator 2...    89   1e-18
AT5G61380.1 | Symbols: TOC1, APRR1, PRR1, AtTOC1 | CCT motif -co...    89   1e-18
AT4G18020.6 | Symbols: APRR2 | CheY-like two-component responsiv...    70   6e-13
AT4G18020.3 | Symbols: APRR2, PRR2 | CheY-like two-component res...    70   6e-13
AT4G18020.2 | Symbols: APRR2, PRR2 | CheY-like two-component res...    70   6e-13
AT4G18020.1 | Symbols: APRR2, PRR2 | CheY-like two-component res...    70   6e-13
AT4G18020.5 | Symbols:  | CheY-like two-component responsive reg...    70   6e-13
AT4G18020.4 | Symbols: APRR2, PRR2 | CheY-like two-component res...    70   6e-13
AT5G07210.1 | Symbols: ARR21, RR21 | response regulator 21 | chr...    69   3e-12
AT1G68210.1 | Symbols: APRR6, PRR6 | pseudo-response regulator 6...    67   7e-12
AT2G27070.1 | Symbols: ARR13, RR13 | response regulator 13 | chr...    64   7e-11
AT3G57040.1 | Symbols: ARR9, ATRR4 | response regulator 9 | chr3...    59   1e-09
AT1G10470.1 | Symbols: ARR4, MEE7, ATRR1, IBC7 | response regula...    59   2e-09
AT1G19050.1 | Symbols: ARR7 | response regulator 7 | chr1:657791...    59   3e-09
AT5G62920.1 | Symbols: ARR6 | response regulator 6 | chr5:252527...    58   3e-09
AT1G59940.1 | Symbols: ARR3 | response regulator 3 | chr1:220658...    57   7e-09
AT3G48100.1 | Symbols: ARR5, ATRR2, IBC6, RR5 | response regulat...    57   7e-09
AT1G74890.1 | Symbols: ARR15 | response regulator 15 | chr1:2813...    56   1e-08
AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | pseudo-response regula...    52   2e-07
AT4G00760.1 | Symbols: APRR8, PRR8 | pseudo-response regulator 8...    51   5e-07
AT2G41310.1 | Symbols: ATRR3, ARR8, RR3 | response regulator 3 |...    50   1e-06
AT2G40670.2 | Symbols: RR16 | response regulator 16 | chr2:16970...    47   9e-06

>AT3G16857.1 | Symbols: ARR1, RR1 | response regulator 1 |
           chr3:5756113-5758853 FORWARD LENGTH=669
          Length = 669

 Score =  273 bits (699), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 126/151 (83%), Positives = 138/151 (91%)

Query: 21  GEAVSDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLLRERKNGFDI 80
           GE V + FP+GLRVLVVDDDPTCLMILE+MLRTCLYEVTKCNRAE AL+LLR+ K+GFDI
Sbjct: 26  GETVVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDI 85

Query: 81  VISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVLKGVTHGACDYLIKPVRIEAL 140
           VISDVHMPDMDGFKLLEH+GLEMDLPVIMMSADD K+VVLKGVTHGA DYLIKPVR+EAL
Sbjct: 86  VISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEAL 145

Query: 141 KNIWQHVVRKRKNEWKDTEQSGSAEEGGDRQ 171
           KNIWQHVVRKR++EW   E SGS EE G+RQ
Sbjct: 146 KNIWQHVVRKRRSEWSVPEHSGSIEETGERQ 176


>AT3G16857.2 | Symbols: ARR1, RR1 | response regulator 1 |
           chr3:5756113-5759139 FORWARD LENGTH=690
          Length = 690

 Score =  273 bits (697), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 126/151 (83%), Positives = 138/151 (91%)

Query: 21  GEAVSDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLLRERKNGFDI 80
           GE V + FP+GLRVLVVDDDPTCLMILE+MLRTCLYEVTKCNRAE AL+LLR+ K+GFDI
Sbjct: 26  GETVVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDI 85

Query: 81  VISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVLKGVTHGACDYLIKPVRIEAL 140
           VISDVHMPDMDGFKLLEH+GLEMDLPVIMMSADD K+VVLKGVTHGA DYLIKPVR+EAL
Sbjct: 86  VISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEAL 145

Query: 141 KNIWQHVVRKRKNEWKDTEQSGSAEEGGDRQ 171
           KNIWQHVVRKR++EW   E SGS EE G+RQ
Sbjct: 146 KNIWQHVVRKRRSEWSVPEHSGSIEETGERQ 176


>AT4G16110.1 | Symbols: ARR2, RR2 | response regulator 2 |
           chr4:9112979-9115785 FORWARD LENGTH=664
          Length = 664

 Score =  268 bits (686), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 131/170 (77%), Positives = 147/170 (86%), Gaps = 4/170 (2%)

Query: 19  SSGEAVSDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLLRERKNGF 78
           ++G + SD FPA LRVLVVDDDPTCLMILE+ML TCLY VTKCNRAE AL+LLR+ KNGF
Sbjct: 15  AAGGSNSDPFPANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGF 74

Query: 79  DIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVLKGVTHGACDYLIKPVRIE 138
           DIVISDVHMPDMDGFKLLEH+GLEMDLPVIMMSADD K+VVLKGVTHGA DYLIKPVRIE
Sbjct: 75  DIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIE 134

Query: 139 ALKNIWQHVVRKRKNEWKDTEQSGSAEE--GG--DRQPRPSDDADYSSSA 184
           ALKNIWQHVVRK++NEW  +E SG + E  GG  DRQ +  +DAD +SS+
Sbjct: 135 ALKNIWQHVVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSS 184


>AT2G25180.1 | Symbols: ARR12, RR12 | response regulator 12 |
           chr2:10724490-10726961 REVERSE LENGTH=596
          Length = 596

 Score =  204 bits (519), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 96/142 (67%), Positives = 111/142 (78%)

Query: 26  DQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLLRERKNGFDIVISDV 85
           DQFP G+RVL VDDD TCL ILE +LR C Y VT  N+A+KAL LLRE KN FD+VISDV
Sbjct: 11  DQFPVGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDV 70

Query: 86  HMPDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVLKGVTHGACDYLIKPVRIEALKNIWQ 145
            MPDMDGFKLLE +GLEMDLPVIM+SA      V+KGVTHGACDYL+KPVRIE LKNIWQ
Sbjct: 71  DMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQ 130

Query: 146 HVVRKRKNEWKDTEQSGSAEEG 167
           HVVR R ++ + +  +G   +G
Sbjct: 131 HVVRSRFDKNRGSNNNGDKRDG 152


>AT1G67710.1 | Symbols: ARR11 | response regulator 11 |
           chr1:25376994-25378905 REVERSE LENGTH=521
          Length = 521

 Score =  199 bits (507), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 97/140 (69%), Positives = 113/140 (80%), Gaps = 2/140 (1%)

Query: 29  PAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLLRERKNGFDIVISDVHMP 88
           P GLRVLVVDDDPT L ILEKML+ C YEVT C  A +AL LLRERK+G+DIVISDV+MP
Sbjct: 8   PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMP 67

Query: 89  DMDGFKLLEHIGLEMDLPVIMMSADDGKNVVLKGVTHGACDYLIKPVRIEALKNIWQHVV 148
           DMDGFKLLEH+GLE+DLPVIMMS D   + V+KGV HGACDYL+KP+R++ LK IWQHV+
Sbjct: 68  DMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVL 127

Query: 149 RKRKNEWKDTEQSGSAEEGG 168
           RK+  E +D E  G   EGG
Sbjct: 128 RKKLQEVRDIE--GCGYEGG 145


>AT4G31920.1 | Symbols: ARR10, RR10 | response regulator 10 |
           chr4:15444290-15446766 REVERSE LENGTH=552
          Length = 552

 Score =  192 bits (488), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 90/126 (71%), Positives = 101/126 (80%)

Query: 24  VSDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLLRERKNGFDIVIS 83
           V DQFP G+RVL VDDD TCL IL+ +L+ C Y VT  N+A+ AL LLRE KN FD+VIS
Sbjct: 9   VLDQFPVGMRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDLVIS 68

Query: 84  DVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVLKGVTHGACDYLIKPVRIEALKNI 143
           DV MPDMDGFKLLE +GLEMDLPVIM+SA      V+KGV HGACDYL+KPVRIE LKNI
Sbjct: 69  DVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNI 128

Query: 144 WQHVVR 149
           WQHVVR
Sbjct: 129 WQHVVR 134


>AT2G01760.1 | Symbols: ARR14, RR14 | response regulator 14 |
           chr2:333041-334514 FORWARD LENGTH=382
          Length = 382

 Score =  189 bits (481), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 91/152 (59%), Positives = 116/152 (76%), Gaps = 10/152 (6%)

Query: 24  VSDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLLRERKNGFDIVIS 83
           ++DQFP+GLR+LVVDDD +CL ILEKML   +Y+VT C++A+ ALT+LRERK+ FD+V+S
Sbjct: 3   INDQFPSGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLS 62

Query: 84  DVHMPDMDGFKLLEHIG-LEMDLPVIMMSADDGKNVVLKGVTHGACDYLIKPVRIEALKN 142
           DVHMP M+G+ LL+ +G LEMDLPVIMMS D     V+ G+ HGACDYLIKP+R E LKN
Sbjct: 63  DVHMPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKN 122

Query: 143 IWQHVVRKR---KNEWK------DTEQSGSAE 165
           IWQHVVR++   K E +      D + SGS E
Sbjct: 123 IWQHVVRRKCVMKKELRSSQALEDNKNSGSLE 154


>AT5G58080.1 | Symbols: ARR18, RR18 | response regulator 18 |
           chr5:23501785-23504099 REVERSE LENGTH=618
          Length = 618

 Score =  151 bits (381), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 76/119 (63%), Positives = 92/119 (77%), Gaps = 1/119 (0%)

Query: 32  LRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLLRERKNGFDIVISDVHMPDMD 91
           +RVL VDD+PTCL  LE++L  C Y VTK   + KAL +LRE  N FD+VISDV MPD D
Sbjct: 1   MRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPDTD 60

Query: 92  GFKLLEHIGLEMDLPVIMMSADDGKNVVLKGVTHGACDYLIKPVRIEALKNIWQHVVRK 150
           GFKLLE IGLEMDLPVIM+SA    + V+KG+ HGACDYL+KPV ++ L+NIW HVV+K
Sbjct: 61  GFKLLE-IGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHVVKK 118


>AT5G49240.1 | Symbols: APRR4, PRR4 | pseudo-response regulator 4 |
           chr5:19962934-19964351 FORWARD LENGTH=292
          Length = 292

 Score =  126 bits (316), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 63/145 (43%), Positives = 93/145 (64%), Gaps = 2/145 (1%)

Query: 24  VSDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLLRERKNGFDIVIS 83
            S  FP GLRVLV D+DP+ L+ILE+ L+   Y+VT CN   KA+  LR  +N FD+ + 
Sbjct: 34  FSSNFPEGLRVLVFDEDPSYLLILERHLQKFQYQVTICNEVNKAMHTLRNHRNRFDLAMI 93

Query: 84  DVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVLKGVTHGACDYLIKPVRIEALKNI 143
            V+  + D F+ L  IG EMDLP+I++S DD    V K + +GA DYLIKP+R E L+ +
Sbjct: 94  QVNNAEGDIFRFLSEIGSEMDLPIIIISEDDSVKSVKKWMINGAADYLIKPIRPEDLRIV 153

Query: 144 WQHVVRKRKNEWKDTEQSGSAEEGG 168
           ++H+V+K +   + +  +G AE+  
Sbjct: 154 FKHLVKKMRE--RRSVVTGEAEKAA 176


>AT1G49190.1 | Symbols: ARR19, RR19 | response regulator 19 |
           chr1:18191342-18193598 FORWARD LENGTH=608
          Length = 608

 Score =  120 bits (301), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 57/125 (45%), Positives = 84/125 (67%)

Query: 27  QFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLLRERKNGFDIVISDVH 86
           QFP    VLVVD + T L+ ++++++   Y+V+    AEKAL  L   K+  +IVI D H
Sbjct: 29  QFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFH 88

Query: 87  MPDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVLKGVTHGACDYLIKPVRIEALKNIWQH 146
           MP +DG + L+ I  ++DLPV++MS D+    V+K   +GACDY++KPV+ E + NIWQH
Sbjct: 89  MPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQH 148

Query: 147 VVRKR 151
           +VRKR
Sbjct: 149 IVRKR 153


>AT1G49190.2 | Symbols: RR19 | response regulator 19 |
           chr1:18191342-18193598 FORWARD LENGTH=622
          Length = 622

 Score =  120 bits (300), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 57/125 (45%), Positives = 84/125 (67%)

Query: 27  QFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLLRERKNGFDIVISDVH 86
           QFP    VLVVD + T L+ ++++++   Y+V+    AEKAL  L   K+  +IVI D H
Sbjct: 29  QFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFH 88

Query: 87  MPDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVLKGVTHGACDYLIKPVRIEALKNIWQH 146
           MP +DG + L+ I  ++DLPV++MS D+    V+K   +GACDY++KPV+ E + NIWQH
Sbjct: 89  MPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQH 148

Query: 147 VVRKR 151
           +VRKR
Sbjct: 149 IVRKR 153


>AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | pseudo-response regulator
           9 | chr2:19232874-19234901 FORWARD LENGTH=468
          Length = 468

 Score =  101 bits (251), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 50/123 (40%), Positives = 78/123 (63%), Gaps = 5/123 (4%)

Query: 32  LRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLLRERKNGFDIVISDVHMPDMD 91
           LRVL+V+ D +   I+  +LR C Y+V   +    A  +L+E+ +  D++++++ +P + 
Sbjct: 37  LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILTELDLPSIS 96

Query: 92  GFKLL----EHIGLEMDLPVIMMSADDGKNVVLKGVTHGACDYLIKPVRIEALKNIWQHV 147
           GF LL    EH   + ++PVIMMS+ D   +VLK +  GA DYLIKP+R   LKN+WQHV
Sbjct: 97  GFALLALVMEHEACK-NIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHV 155

Query: 148 VRK 150
            R+
Sbjct: 156 WRR 158


>AT5G24470.1 | Symbols: APRR5, PRR5 | pseudo-response regulator 5 |
           chr5:8356204-8358873 REVERSE LENGTH=667
          Length = 667

 Score = 97.1 bits (240), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 74/125 (59%), Gaps = 5/125 (4%)

Query: 31  GLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLLRERKNGFDIVISDVHMPDM 90
            LRVL+V+ D +   I+  +LR C Y V       KA  +L+ +    D+++++V +P +
Sbjct: 158 ALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILTEVDLPSI 217

Query: 91  DGFKLLEHIGLEMDL----PVIMMSADDGKNVVLKGVTHGACDYLIKPVRIEALKNIWQH 146
            G+ LL  I +E D+    PVIMMS  D  N V K +  GA DYL+KP+R   L+N+WQH
Sbjct: 218 SGYALLTLI-MEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNELRNLWQH 276

Query: 147 VVRKR 151
           V R++
Sbjct: 277 VWRRQ 281


>AT5G60100.3 | Symbols: PRR3 | pseudo-response regulator 3 |
           chr5:24198215-24200502 REVERSE LENGTH=495
          Length = 495

 Score = 94.0 bits (232), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 79/123 (64%), Gaps = 5/123 (4%)

Query: 32  LRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLLRERKNGFDIVISDVHMPDMD 91
           L+VL+V++D +   I+  +L+ C YEVT      +A  +L + K+  D+V+++V MP   
Sbjct: 64  LKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHS 123

Query: 92  GF----KLLEHIGLEMDLPVIMMSADDGKNVVLKGVTHGACDYLIKPVRIEALKNIWQHV 147
           G     K++ H  L+ ++PVIMMS+ D   +V K +++GA D+L+KP+R   LKN+WQHV
Sbjct: 124 GTGLLSKIMSHKTLK-NIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHV 182

Query: 148 VRK 150
            R+
Sbjct: 183 WRR 185


>AT5G60100.1 | Symbols: APRR3, PRR3 | pseudo-response regulator 3 |
           chr5:24198215-24200502 REVERSE LENGTH=495
          Length = 495

 Score = 94.0 bits (232), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 79/123 (64%), Gaps = 5/123 (4%)

Query: 32  LRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLLRERKNGFDIVISDVHMPDMD 91
           L+VL+V++D +   I+  +L+ C YEVT      +A  +L + K+  D+V+++V MP   
Sbjct: 64  LKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHS 123

Query: 92  GF----KLLEHIGLEMDLPVIMMSADDGKNVVLKGVTHGACDYLIKPVRIEALKNIWQHV 147
           G     K++ H  L+ ++PVIMMS+ D   +V K +++GA D+L+KP+R   LKN+WQHV
Sbjct: 124 GTGLLSKIMSHKTLK-NIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHV 182

Query: 148 VRK 150
            R+
Sbjct: 183 WRR 185


>AT5G02810.1 | Symbols: PRR7, APRR7 | pseudo-response regulator 7 |
           chr5:638283-641461 REVERSE LENGTH=727
          Length = 727

 Score = 94.0 bits (232), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 75/123 (60%), Gaps = 5/123 (4%)

Query: 32  LRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLLRERKNGFDIVISDVHMPDMD 91
           +RVL+V++D     I+  +LR C YEV + +   +A  +L +  N  DIV+++V MP + 
Sbjct: 78  IRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLS 137

Query: 92  GF----KLLEHIGLEMDLPVIMMSADDGKNVVLKGVTHGACDYLIKPVRIEALKNIWQHV 147
           G     K+L H     ++PVIMMS+ D   +V K ++ GA D+L+KP+R   LK +WQHV
Sbjct: 138 GIGLLCKILNHKS-RRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHV 196

Query: 148 VRK 150
            R+
Sbjct: 197 WRR 199


>AT5G60100.2 | Symbols: PRR3 | pseudo-response regulator 3 |
           chr5:24198215-24200502 REVERSE LENGTH=522
          Length = 522

 Score = 93.6 bits (231), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 48/124 (38%), Positives = 79/124 (63%), Gaps = 5/124 (4%)

Query: 31  GLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLLRERKNGFDIVISDVHMPDM 90
            L+VL+V++D +   I+  +L+ C YEVT      +A  +L + K+  D+V+++V MP  
Sbjct: 63  SLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVDMPVH 122

Query: 91  DGF----KLLEHIGLEMDLPVIMMSADDGKNVVLKGVTHGACDYLIKPVRIEALKNIWQH 146
            G     K++ H  L+ ++PVIMMS+ D   +V K +++GA D+L+KP+R   LKN+WQH
Sbjct: 123 SGTGLLSKIMSHKTLK-NIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQH 181

Query: 147 VVRK 150
           V R+
Sbjct: 182 VWRR 185


>AT3G62670.1 | Symbols: ARR20, MEE41, RR20 | response regulator 20 |
           chr3:23176556-23177922 REVERSE LENGTH=352
          Length = 352

 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 65/105 (61%), Gaps = 2/105 (1%)

Query: 68  LTLLRERKNGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVLKGVTHGA 127
           +  L + K+  D+VI D HMPD++G   L  IG +MDLPV++MS +  K  V++ + +GA
Sbjct: 1   MAFLMKNKHEIDLVIWDFHMPDINGLDALNIIGKQMDLPVVIMSHEYKKETVMESIKYGA 60

Query: 128 CDYLIKPVRIEALKNIWQHVVRKR--KNEWKDTEQSGSAEEGGDR 170
           CD+L+KPV  E +  +W+HV RKR  K+      +SG+ E   D 
Sbjct: 61  CDFLVKPVSKEVIAVLWRHVYRKRMSKSGLDKPGESGTVESDPDE 105


>AT5G61380.1 | Symbols: TOC1, APRR1, PRR1, AtTOC1 | CCT motif
           -containing response regulator protein |
           chr5:24675540-24678176 FORWARD LENGTH=618
          Length = 618

 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 3/124 (2%)

Query: 32  LRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLLRERKNGFDIVISDVHMPDMD 91
           +R+L+ D+D T L  +  +L  C Y+VT    A + +  L       DI+++++ +P   
Sbjct: 19  VRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILAEIDLPMAK 78

Query: 92  GFKLLEHIGLEMDL---PVIMMSADDGKNVVLKGVTHGACDYLIKPVRIEALKNIWQHVV 148
           G K+L +I  + DL   PVIMMS  D   VV+K +  GA DYL+KP+R   L N+W H+ 
Sbjct: 79  GMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMW 138

Query: 149 RKRK 152
           R+R+
Sbjct: 139 RRRR 142


>AT4G18020.6 | Symbols: APRR2 | CheY-like two-component responsive
           regulator family protein | chr4:10003738-10006682
           REVERSE LENGTH=535
          Length = 535

 Score = 70.5 bits (171), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 69/136 (50%), Gaps = 9/136 (6%)

Query: 26  DQFPAGLRVLVV------DDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLLRERKNGFD 79
           + FP GL+VL++      D D +        L +  Y VT      +AL+ + +    F 
Sbjct: 12  ENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALSAVVKNPESFH 71

Query: 80  IVISDVHM-PDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVLKGVTHGACDYLIKPVRIE 138
           I I +V+M  + + FK LE    +  LP IM+S D      +K +  GA ++L KP+  E
Sbjct: 72  IAIVEVNMSAESESFKFLE--AAKDVLPTIMISTDHCITTTMKCIALGAVEFLQKPLSPE 129

Query: 139 ALKNIWQHVVRKRKNE 154
            LKNIWQHVV K  N+
Sbjct: 130 KLKNIWQHVVHKAFND 145


>AT4G18020.3 | Symbols: APRR2, PRR2 | CheY-like two-component
           responsive regulator family protein |
           chr4:10003738-10006682 REVERSE LENGTH=535
          Length = 535

 Score = 70.5 bits (171), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 69/136 (50%), Gaps = 9/136 (6%)

Query: 26  DQFPAGLRVLVV------DDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLLRERKNGFD 79
           + FP GL+VL++      D D +        L +  Y VT      +AL+ + +    F 
Sbjct: 12  ENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALSAVVKNPESFH 71

Query: 80  IVISDVHM-PDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVLKGVTHGACDYLIKPVRIE 138
           I I +V+M  + + FK LE    +  LP IM+S D      +K +  GA ++L KP+  E
Sbjct: 72  IAIVEVNMSAESESFKFLE--AAKDVLPTIMISTDHCITTTMKCIALGAVEFLQKPLSPE 129

Query: 139 ALKNIWQHVVRKRKNE 154
            LKNIWQHVV K  N+
Sbjct: 130 KLKNIWQHVVHKAFND 145


>AT4G18020.2 | Symbols: APRR2, PRR2 | CheY-like two-component
           responsive regulator family protein |
           chr4:10003738-10006682 REVERSE LENGTH=535
          Length = 535

 Score = 70.5 bits (171), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 69/136 (50%), Gaps = 9/136 (6%)

Query: 26  DQFPAGLRVLVV------DDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLLRERKNGFD 79
           + FP GL+VL++      D D +        L +  Y VT      +AL+ + +    F 
Sbjct: 12  ENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALSAVVKNPESFH 71

Query: 80  IVISDVHM-PDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVLKGVTHGACDYLIKPVRIE 138
           I I +V+M  + + FK LE    +  LP IM+S D      +K +  GA ++L KP+  E
Sbjct: 72  IAIVEVNMSAESESFKFLE--AAKDVLPTIMISTDHCITTTMKCIALGAVEFLQKPLSPE 129

Query: 139 ALKNIWQHVVRKRKNE 154
            LKNIWQHVV K  N+
Sbjct: 130 KLKNIWQHVVHKAFND 145


>AT4G18020.1 | Symbols: APRR2, PRR2 | CheY-like two-component
           responsive regulator family protein |
           chr4:10003738-10006682 REVERSE LENGTH=535
          Length = 535

 Score = 70.5 bits (171), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 69/136 (50%), Gaps = 9/136 (6%)

Query: 26  DQFPAGLRVLVV------DDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLLRERKNGFD 79
           + FP GL+VL++      D D +        L +  Y VT      +AL+ + +    F 
Sbjct: 12  ENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALSAVVKNPESFH 71

Query: 80  IVISDVHM-PDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVLKGVTHGACDYLIKPVRIE 138
           I I +V+M  + + FK LE    +  LP IM+S D      +K +  GA ++L KP+  E
Sbjct: 72  IAIVEVNMSAESESFKFLE--AAKDVLPTIMISTDHCITTTMKCIALGAVEFLQKPLSPE 129

Query: 139 ALKNIWQHVVRKRKNE 154
            LKNIWQHVV K  N+
Sbjct: 130 KLKNIWQHVVHKAFND 145


>AT4G18020.5 | Symbols:  | CheY-like two-component responsive
           regulator family protein | chr4:10003991-10006682
           REVERSE LENGTH=487
          Length = 487

 Score = 70.5 bits (171), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 69/136 (50%), Gaps = 9/136 (6%)

Query: 26  DQFPAGLRVLVV------DDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLLRERKNGFD 79
           + FP GL+VL++      D D +        L +  Y VT      +AL+ + +    F 
Sbjct: 12  ENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALSAVVKNPESFH 71

Query: 80  IVISDVHM-PDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVLKGVTHGACDYLIKPVRIE 138
           I I +V+M  + + FK LE    +  LP IM+S D      +K +  GA ++L KP+  E
Sbjct: 72  IAIVEVNMSAESESFKFLE--AAKDVLPTIMISTDHCITTTMKCIALGAVEFLQKPLSPE 129

Query: 139 ALKNIWQHVVRKRKNE 154
            LKNIWQHVV K  N+
Sbjct: 130 KLKNIWQHVVHKAFND 145


>AT4G18020.4 | Symbols: APRR2, PRR2 | CheY-like two-component
           responsive regulator family protein |
           chr4:10003991-10006682 REVERSE LENGTH=487
          Length = 487

 Score = 70.5 bits (171), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 69/136 (50%), Gaps = 9/136 (6%)

Query: 26  DQFPAGLRVLVV------DDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLLRERKNGFD 79
           + FP GL+VL++      D D +        L +  Y VT      +AL+ + +    F 
Sbjct: 12  ENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALSAVVKNPESFH 71

Query: 80  IVISDVHM-PDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVLKGVTHGACDYLIKPVRIE 138
           I I +V+M  + + FK LE    +  LP IM+S D      +K +  GA ++L KP+  E
Sbjct: 72  IAIVEVNMSAESESFKFLE--AAKDVLPTIMISTDHCITTTMKCIALGAVEFLQKPLSPE 129

Query: 139 ALKNIWQHVVRKRKNE 154
            LKNIWQHVV K  N+
Sbjct: 130 KLKNIWQHVVHKAFND 145


>AT5G07210.1 | Symbols: ARR21, RR21 | response regulator 21 |
           chr5:2252237-2256018 FORWARD LENGTH=621
          Length = 621

 Score = 68.6 bits (166), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 11/131 (8%)

Query: 32  LRVLVVDDDPTCLMILEKMLRTCLYE--------VTKCNRAEKALTLLRERKNGFDIVIS 83
           + V+VVDDD   L I+ +ML+   Y         V   +  +KAL+ L+ +++  D++I+
Sbjct: 16  INVMVVDDDHVFLDIMSRMLQHSKYRDPSVMEIAVIAVDDPKKALSTLKIQRDNIDLIIT 75

Query: 84  DVHMPDMDGFKLLEHIGLEM-DLPVIMMSADDGKNVVLKGVTHGACDYLIKPVRIEALKN 142
           D +MP M+G +L + I  E  +LPV++MS+D  K    + ++ GA  ++ KP+    L  
Sbjct: 76  DYYMPGMNGLQLKKQITQEFGNLPVLVMSSDTNKEE--ESLSCGAMGFIPKPIHPTDLTK 133

Query: 143 IWQHVVRKRKN 153
           I+Q  +  ++N
Sbjct: 134 IYQFALSNKRN 144


>AT1G68210.1 | Symbols: APRR6, PRR6 | pseudo-response regulator 6 |
           chr1:25565983-25569302 FORWARD LENGTH=755
          Length = 755

 Score = 67.0 bits (162), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 68/125 (54%), Gaps = 1/125 (0%)

Query: 32  LRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLLRERKNGFDIVISDVHMPDMD 91
           + +L++D D   +  L  ML+     V   + A KAL+++ ++K    ++I+++ MP +D
Sbjct: 13  ISILLIDHDTASIASLTSMLQQFSKRVMSVDVASKALSMIEKQKKEIGLIIANIEMPHID 72

Query: 92  GFKLLEHIGLEMDLPVIMMSADDGKNVVLKGVTHGACDYLIKPVRIEALKNIWQHVVRKR 151
               L  + L+ D+P+I+++ +         +T  AC  L KP+  + +KN+WQHV  K+
Sbjct: 73  SHSFLNALLLK-DIPLILINPEIKTKEPSDLLTKRACFSLDKPISNDDIKNMWQHVFSKK 131

Query: 152 KNEWK 156
             E K
Sbjct: 132 SQELK 136


>AT2G27070.1 | Symbols: ARR13, RR13 | response regulator 13 |
           chr2:11555781-11560215 REVERSE LENGTH=575
          Length = 575

 Score = 63.9 bits (154), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 39/126 (30%), Positives = 71/126 (56%), Gaps = 6/126 (4%)

Query: 32  LRVLVVDDDPTCLMILEKMLRTCLYE---VTKCNRAEKALTLLRERKNGFDIVISDVHMP 88
           + V+VVDD+   L I  +ML    Y    V   +  +KAL+ L+ +++  D++I+D +MP
Sbjct: 16  INVMVVDDNRVFLDIWSRMLEKSKYREITVIAVDYPKKALSTLKNQRDNIDLIITDYYMP 75

Query: 89  DMDGFKLLEHIGLEM-DLPVIMMSADDGKNVVLKGVTHGACDYLIKPVRIEALKNIWQHV 147
            M+G +L + I  E  +L V++MS+D  K    + ++ GA  ++ KP+    L  I+Q  
Sbjct: 76  GMNGLQLKKQITQEFGNLSVLVMSSDPNKEE--ESLSCGAMGFIPKPIAPTDLPKIYQFA 133

Query: 148 VRKRKN 153
           +  ++N
Sbjct: 134 LTYKRN 139


>AT3G57040.1 | Symbols: ARR9, ATRR4 | response regulator 9 |
           chr3:21110059-21111228 FORWARD LENGTH=234
          Length = 234

 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 27/171 (15%)

Query: 21  GEAVSDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLLRERK----- 75
           G A   QF     VL VDD      ++E++L+    +VT  +   KAL  L  R+     
Sbjct: 2   GMAAESQF----HVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSN 57

Query: 76  --NGF------------DIVISDVHMPDMDGFKLLEHI---GLEMDLPVIMMSADDGKNV 118
             N F            +++I+D  MP M G+ LL+ +       D+PV++MS+++    
Sbjct: 58  DPNAFSKAPVNHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPAR 117

Query: 119 VLKGVTHGACDYLIKPVRIEALKNIWQHVVR-KRKNEWKDTEQSGSAEEGG 168
           + + +  GA ++ +KPVR+  L  +  H+++ K KN+  +  ++ S  E G
Sbjct: 118 ISRCLEEGAEEFFLKPVRLADLNKLKPHMMKTKLKNQKLEEIETTSKVENG 168


>AT1G10470.1 | Symbols: ARR4, MEE7, ATRR1, IBC7 | response regulator
           4 | chr1:3442624-3443759 REVERSE LENGTH=259
          Length = 259

 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 72/131 (54%), Gaps = 12/131 (9%)

Query: 34  VLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLL---RERKNG------FDIVISD 84
           VL VDD     +++E++LR    +VT  +   +AL  L    E+ +        D++I+D
Sbjct: 36  VLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKASAEFDRLKVDLIITD 95

Query: 85  VHMPDMDGFKLLEHIGLE---MDLPVIMMSADDGKNVVLKGVTHGACDYLIKPVRIEALK 141
             MP M G++LL+ I       ++PV++MS+++    + + +  GA D+L+KPV++  +K
Sbjct: 96  YCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKPVKLADVK 155

Query: 142 NIWQHVVRKRK 152
            +  H+ +  K
Sbjct: 156 RLRSHLTKDVK 166


>AT1G19050.1 | Symbols: ARR7 | response regulator 7 |
           chr1:6577919-6579078 REVERSE LENGTH=206
          Length = 206

 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 31/162 (19%)

Query: 21  GEAVSDQFPAG---------LRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLL 71
           GE +  + PAG         L VL VDD      ++E++LR    +VT      +AL  L
Sbjct: 4   GEVMRMEIPAGGDLTVTTPELHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYL 63

Query: 72  RERKNGFD--------------IVISDVHMPDMDGFKLLEHI---GLEMDLPVIMMSADD 114
                G D              ++++D  MP + G+ LL+ I       ++PV++MS+++
Sbjct: 64  -----GLDGGKGASNLKDLKVNLIVTDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSEN 118

Query: 115 GKNVVLKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWK 156
               + + +  GA ++L+KPV++  +K I Q ++R    E K
Sbjct: 119 ILPRIQECLKEGAEEFLLKPVKLADVKRIKQLIMRNEAEECK 160


>AT5G62920.1 | Symbols: ARR6 | response regulator 6 |
           chr5:25252745-25254158 REVERSE LENGTH=186
          Length = 186

 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 70/127 (55%), Gaps = 12/127 (9%)

Query: 29  PAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLL----RERKNGFD----- 79
           P  L VL VDD       +E++LR    +VT  + A +AL  L     E+  GF+     
Sbjct: 22  PDPLHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVEEKSVGFEDLKVN 81

Query: 80  IVISDVHMPDMDGFKLLEHI---GLEMDLPVIMMSADDGKNVVLKGVTHGACDYLIKPVR 136
           ++++D  MP M G++LL+ I       ++PV++MS+++    + + +  GA D+L+KPV+
Sbjct: 82  LIMTDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAEDFLLKPVK 141

Query: 137 IEALKNI 143
           +  +K +
Sbjct: 142 LSDVKRL 148


>AT1G59940.1 | Symbols: ARR3 | response regulator 3 |
           chr1:22065894-22066895 REVERSE LENGTH=231
          Length = 231

 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 74/140 (52%), Gaps = 16/140 (11%)

Query: 25  SDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLL---------RERK 75
           SDQ    + VL VDD     +++E++LR    +VT  +   +AL  L            +
Sbjct: 30  SDQ----VHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAVEFDR 85

Query: 76  NGFDIVISDVHMPDMDGFKLLEHIGLEM---DLPVIMMSADDGKNVVLKGVTHGACDYLI 132
              D++I+D  MP M G++LL+ I       ++PV++MS+++    + + +  GA D+L+
Sbjct: 86  LKVDLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLL 145

Query: 133 KPVRIEALKNIWQHVVRKRK 152
           KPV++  +K +  ++ R  K
Sbjct: 146 KPVKLADVKRLRSYLTRDVK 165


>AT3G48100.1 | Symbols: ARR5, ATRR2, IBC6, RR5 | response regulator
           5 | chr3:17759112-17760740 REVERSE LENGTH=184
          Length = 184

 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 75/142 (52%), Gaps = 13/142 (9%)

Query: 29  PAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLL-----RERKNGFD---- 79
           P  L VL VDD       +E++LR    +VT  + A +AL  L          GF+    
Sbjct: 22  PKLLHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSSVGFEDLKI 81

Query: 80  -IVISDVHMPDMDGFKLLEHI---GLEMDLPVIMMSADDGKNVVLKGVTHGACDYLIKPV 135
            ++++D  MP M G++LL+ I       ++PV++MS+++    + + +  GA D+L+KPV
Sbjct: 82  NLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPV 141

Query: 136 RIEALKNIWQHVVRKRKNEWKD 157
           ++  +K +   +++  +  +K+
Sbjct: 142 KLADVKRLRDSLMKAEERAFKN 163


>AT1G74890.1 | Symbols: ARR15 | response regulator 15 |
           chr1:28131590-28132710 REVERSE LENGTH=206
          Length = 206

 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 80/155 (51%), Gaps = 23/155 (14%)

Query: 32  LRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLL-RERKNG--------FDIVI 82
           L VL VDD      ++E++L+    +VT      +AL  L  +  NG         ++++
Sbjct: 18  LHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDNGSSGLKDLKVNLIV 77

Query: 83  SDVHMPDMDGFKLLEHI---GLEMDLPVIMMSADDGKNVVLKGVTHGACDYLIKPVRIEA 139
           +D  MP + G++LL+ I       ++PV++MS+++ +  + + +  GA ++L+KPV++  
Sbjct: 78  TDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEEFLLKPVKLAD 137

Query: 140 LKNIWQHVVRKRKNEWKDTEQSGSAEEGGDRQPRP 174
           +K + + ++R            G AEEG  ++  P
Sbjct: 138 VKRLKELIMR-----------GGEAEEGKTKKLSP 161


>AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | pseudo-response regulator
           9 | chr2:19233422-19234901 FORWARD LENGTH=351
          Length = 351

 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/41 (56%), Positives = 29/41 (70%)

Query: 110 MSADDGKNVVLKGVTHGACDYLIKPVRIEALKNIWQHVVRK 150
           MS+ D   +VLK +  GA DYLIKP+R   LKN+WQHV R+
Sbjct: 1   MSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHVWRR 41


>AT4G00760.1 | Symbols: APRR8, PRR8 | pseudo-response regulator 8 |
           chr4:327236-328955 REVERSE LENGTH=336
          Length = 336

 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 57/104 (54%), Gaps = 1/104 (0%)

Query: 50  MLRTCLYEVTKCNRAEKALTLLRERKNGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIM 109
           M+R C Y+V    RA+    ++  +    D+V+++  + +M+ ++LLE I    ++PV++
Sbjct: 1   MIRKCGYKVVATTRADDLPLIINNKDKKIDLVLAEFRLIEMNKYELLEKIRSICEIPVVV 60

Query: 110 MSADDGKNVVLKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKN 153
             A   K+ +++ +  GA   L KP+     K +WQ  V +++N
Sbjct: 61  SGA-HVKDAIVECLCRGAKLCLEKPLMENDFKILWQFTVSRQRN 103


>AT2G41310.1 | Symbols: ATRR3, ARR8, RR3 | response regulator 3 |
           chr2:17222280-17223536 FORWARD LENGTH=225
          Length = 225

 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 22/157 (14%)

Query: 30  AGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLLRERKNGFD---------- 79
           +   VL VDD      ++E++L+    +VT  +   KAL  L  R +  D          
Sbjct: 7   SKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALSTSPQI 66

Query: 80  -------IVISDVHMPDMDGFKLLEHI---GLEMDLPVIMMSADDGKNVVLKGVTHGACD 129
                  ++I+D  MP M G+ LL+ +        +PV++MS+++    + + +  GA +
Sbjct: 67  HQEVEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEE 126

Query: 130 YLIKPVRIEALKNIWQHVVRKRKNEWKDTEQSGSAEE 166
           + +KPV++  L  +  H+++ +    K++E+  + EE
Sbjct: 127 FFLKPVKLADLTKLKPHMMKTKLK--KESEKPVAIEE 161


>AT2G40670.2 | Symbols: RR16 | response regulator 16 |
           chr2:16970258-16971120 FORWARD LENGTH=165
          Length = 165

 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 71/136 (52%), Gaps = 16/136 (11%)

Query: 32  LRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEKALTLLR--ERKNGFD---------- 79
           L VL VDD+     ++E++L+    +VT    A +AL  L   ++    D          
Sbjct: 29  LHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQNQHIDALTCNVMKVS 88

Query: 80  IVISDVHMPDMDGFKLLEHIGLE----MDLPVIMMSADDGKNVVLKGVTHGACDYLIKPV 135
           ++I+D  MP M GF+LL+ +  E     ++PV++MS+++    + K +  GA  ++ KP+
Sbjct: 89  LIITDYCMPGMTGFELLKKVKQESSNLREVPVVIMSSENIPTRINKCLASGAQMFMQKPL 148

Query: 136 RIEALKNIWQHVVRKR 151
           ++  ++ +  H++  R
Sbjct: 149 KLADVEKLKCHLMNCR 164