Miyakogusa Predicted Gene

Lj0g3v0159929.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0159929.1 tr|A9SFM5|A9SFM5_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,40.68,0.000000000000009, ,CUFF.9919.1
         (131 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G06240.1 | Symbols: emb2735 | embryo defective 2735 | chr5:18...   149   3e-37

>AT5G06240.1 | Symbols: emb2735 | embryo defective 2735 |
           chr5:1888380-1889512 FORWARD LENGTH=162
          Length = 162

 Score =  149 bits (377), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 77/114 (67%), Positives = 86/114 (75%), Gaps = 2/114 (1%)

Query: 1   MKLRVVCRKLYDYVRYDLKEIAFPSSLPDPPDMKKRLKLSWEERIWVLKRAARLYAASWV 60
           MKL+VV RK+ DY+ YDLKEI  PSSLPDPP + KR KL+W ER  VLK A+RLYAASWV
Sbjct: 1   MKLKVVYRKVSDYICYDLKEIVLPSSLPDPPHVVKRRKLTWHERFLVLKEASRLYAASWV 60

Query: 61  RDIGPDLRPDDYKNDDMTDEPNGDKETTKGKEPSTLEDLAVAARGGMETLRPAL 114
           RDIGP+LRP+DYK     +     KE     EPS LEDLAVAARGGMETLRPAL
Sbjct: 61  RDIGPELRPNDYKKQGDAEPKKQAKEAE--NEPSVLEDLAVAARGGMETLRPAL 112