Miyakogusa Predicted Gene
- Lj0g3v0159849.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0159849.1 Non Chatacterized Hit- tr|F6HFJ5|F6HFJ5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,26.22,3e-17,PPR: pentatricopeptide repeat domain,Pentatricopeptide
repeat; PPR_2,Pentatricopeptide repeat; PPR,P,CUFF.9913.1
(593 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 608 e-174
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 4e-69
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 6e-62
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 9e-62
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 1e-52
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 2e-49
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 3e-49
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 4e-49
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 2e-48
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 3e-47
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 1e-46
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 1e-45
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 2e-44
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 1e-42
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 166 4e-41
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 2e-39
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 4e-38
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 4e-38
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 6e-38
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 149 4e-36
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 147 1e-35
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 147 2e-35
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 3e-35
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 3e-35
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 6e-35
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 145 7e-35
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 145 8e-35
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 4e-34
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 142 5e-34
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 1e-33
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 3e-33
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 4e-33
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 5e-33
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 1e-32
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 137 2e-32
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 5e-32
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 1e-31
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 1e-31
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 1e-31
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 1e-31
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 2e-31
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 5e-31
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 5e-31
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 6e-31
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 9e-31
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 1e-30
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 130 3e-30
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 3e-30
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 129 8e-30
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 3e-29
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 3e-29
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 8e-29
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 8e-29
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 8e-29
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 1e-28
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 1e-28
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 125 1e-28
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 124 1e-28
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 2e-28
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 2e-28
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 122 5e-28
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 8e-28
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 8e-28
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 9e-28
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 1e-27
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 121 1e-27
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 2e-27
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 4e-27
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 5e-27
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 5e-27
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 7e-27
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 118 1e-26
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 4e-26
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 7e-26
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 9e-26
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 1e-25
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 114 1e-25
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 3e-25
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 4e-25
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 6e-25
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 112 7e-25
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 9e-25
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 4e-24
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 109 5e-24
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 6e-24
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 7e-24
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 7e-24
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 8e-24
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 9e-24
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 108 1e-23
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 6e-23
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 6e-23
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 7e-23
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 9e-23
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 1e-22
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 105 1e-22
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 1e-22
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 5e-22
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 6e-22
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 7e-22
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 102 9e-22
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 1e-21
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 100 2e-21
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 6e-21
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 9e-21
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 98 2e-20
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 97 3e-20
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 97 5e-20
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 8e-20
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 6e-19
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 6e-19
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 8e-19
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 91 2e-18
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 91 2e-18
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 87 2e-17
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 83 7e-16
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 7e-16
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 80 4e-15
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 80 5e-15
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 80 5e-15
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 8e-15
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 79 1e-14
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 77 3e-14
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 9e-14
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 73 5e-13
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 73 7e-13
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 72 1e-12
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 68 2e-11
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 68 2e-11
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 68 2e-11
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 5e-11
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 65 2e-10
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 4e-10
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 5e-10
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 63 5e-10
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 62 1e-09
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 57 4e-08
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 57 5e-08
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 57 5e-08
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 56 6e-08
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 56 6e-08
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 7e-08
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 56 8e-08
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 55 1e-07
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 55 1e-07
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 55 1e-07
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 55 1e-07
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 54 3e-07
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 54 3e-07
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 5e-07
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 53 5e-07
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 7e-07
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 52 8e-07
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 2e-06
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-06
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 50 4e-06
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 50 5e-06
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 50 6e-06
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 49 7e-06
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 1e-05
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 608 bits (1567), Expect = e-174, Method: Compositional matrix adjust.
Identities = 292/495 (58%), Positives = 365/495 (73%), Gaps = 11/495 (2%)
Query: 100 IRDVVLAQDVKTILDIMHEPGSRPSEIKHKLEXXXXXXXXXXXXXXXXXIRNDWEAAFTF 159
I D ++++DV I ++ + GS E+++KLE +RNDWE AFTF
Sbjct: 88 ISDELVSEDVGKISKLVKDCGSDRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTF 147
Query: 160 FLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIR 219
F+WAGKQ GY SVREYHSMISILGKMRKFDTAW LI+ MR PSLV QTLLIMIR
Sbjct: 148 FVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRK--FSPSLVNSQTLLIMIR 205
Query: 220 KYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLE 279
KYCAV DVG+AINTF+A+KRF ++GID+FQ LLSALCRYKNV DA HL+FCNK+ +P +
Sbjct: 206 KYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFD 265
Query: 280 IKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLF 339
KSFNI+LNGWCN+I S REAERVW EM G++HDVVSY+S++SCYSK L KV +LF
Sbjct: 266 AKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLF 325
Query: 340 DQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKN-NVTPDVVTYNSLIKPLCK 398
D+MK + I PDRKVYNAV+HALAK V EA NL++TME+ + P+VVTYNSLIKPLCK
Sbjct: 326 DRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCK 385
Query: 399 NRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIM 458
RK +EAK+VF++M+++ + PTIRT+HAF RILR EEVFELL KMR++GC PT+ETYIM
Sbjct: 386 ARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIM 445
Query: 459 LIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKG 518
LIRK CRWR D V +W+ M+E V D SSYIV+IHGLFLNGK++EA+ YY EM+ KG
Sbjct: 446 LIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKG 505
Query: 519 FLPEPKTEQMLQAWLSGRQGTEGQVTDLEHNQLEDDTVEKKVKATPSKFDKEKAFLREPE 578
P E M+Q+W SG+Q E ++TD + E A K ++EK FL++PE
Sbjct: 506 MRPNENVEDMIQSWFSGKQYAEQRITDSKG--------EVNKGAIVKKSEREKNFLQQPE 557
Query: 579 TRRVTRDRGFSFWDQ 593
R+V R+ G+SFWD+
Sbjct: 558 VRKVVREHGYSFWDE 572
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 129/382 (33%), Positives = 220/382 (57%), Gaps = 7/382 (1%)
Query: 149 IRNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSL 208
+R++W AF F W K+ + MI +LG +KF+ AW LI M S
Sbjct: 133 LRDEWRLAFLAFKWGEKRG--CDDQKSCDLMIWVLGNHQKFNIAWCLIRDM----FNVSK 186
Query: 209 VTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHL 268
T + + +M+ +Y A D +AI TF +F + FQGLL ALCR+ +++ AE
Sbjct: 187 DTRKAMFLMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEF 246
Query: 269 LFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSK 328
+ +K +FP++++ FN+ILNGWCN+ EA+R+W EM I + SY+ ++SC+SK
Sbjct: 247 MLASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSK 306
Query: 329 SSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVT 388
L+ +L+D+MK + + P +VYN++++ L + EA+ L++ + + + PD VT
Sbjct: 307 VGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVT 366
Query: 389 YNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELG 448
YNS+I+PLC+ K+D A+ V M+ N++PT+ TFHAF + E+ E+L +M+
Sbjct: 367 YNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNF-EKTLEVLGQMKISD 425
Query: 449 CYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAH 508
PT ET+++++ K + ++ + KIW M + + + Y+ I GL G +++A
Sbjct: 426 LGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAR 485
Query: 509 DYYIEMQRKGFLPEPKTEQMLQ 530
+ Y EM+ KGF+ P +++L+
Sbjct: 486 EIYSEMKSKGFVGNPMLQKLLE 507
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 123/368 (33%), Positives = 207/368 (56%), Gaps = 6/368 (1%)
Query: 156 AFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLL 215
+ FF+WA KQP Y HS+ Y SM+ IL KMR+F W LIE MR P L+ P+ +
Sbjct: 130 GYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRK--ENPQLIEPELFV 187
Query: 216 IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNV 275
++++++ + V +AI +FGF+ F LL ALC++ +V+DA L +
Sbjct: 188 VLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR 247
Query: 276 FPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKV 335
FP+ ++ F +L GWC + EA+ V +M++ G + D+V Y +++S Y+ + K+
Sbjct: 248 FPVNLRYFTSLLYGWCR-VGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADA 306
Query: 336 FQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKP 395
+ L M+ + P+ Y +I AL K ++EA+ + ME+ DVVTY +L+
Sbjct: 307 YDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSG 366
Query: 396 LCKNRKIDEAKEVFNDMMKRNITPTIRTF-HAFFRILRVE--EEVFELLDKMRELGCYPT 452
CK KID+ V +DM+K+ + P+ T+ H + E EE EL++KMR++ +P
Sbjct: 367 FCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPD 426
Query: 453 IETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYI 512
I Y ++IR C+ ++ E ++WN M E+G+S +++++I+GL G + EA D++
Sbjct: 427 IGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFK 486
Query: 513 EMQRKGFL 520
EM +G
Sbjct: 487 EMVTRGLF 494
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 105/252 (41%), Gaps = 42/252 (16%)
Query: 314 HDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKK---ITPDRKVYNAVIHALAKGRLVKEA 370
H + Y S++ SK + V+ L ++M+ + I P+ ++ ++ A +VK+A
Sbjct: 145 HSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPE--LFVVLVQRFASADMVKKA 202
Query: 371 VNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKR---NITPTIRTFHAF 427
+ +L M K PD + L+ LCK+ + +A ++F DM R N+ + +
Sbjct: 203 IEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGW 262
Query: 428 FRILRVEE----------------------------------EVFELLDKMRELGCYPTI 453
R+ ++ E + ++LL MR G P
Sbjct: 263 CRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNA 322
Query: 454 ETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIE 513
Y +LI+ C+ +++E K++ M D +Y L+ G GK+ + + +
Sbjct: 323 NCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDD 382
Query: 514 MQRKGFLPEPKT 525
M +KG +P T
Sbjct: 383 MIKKGLMPSELT 394
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 234 bits (598), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 139/432 (32%), Positives = 227/432 (52%), Gaps = 8/432 (1%)
Query: 101 RDVVLAQDVKTILDIMHEPGSRPSEIKHKLEXXXXXXXXXXXXXXXXXIRNDWEAAFTFF 160
+D A DV I I H GS P +IK L+ R+DW+ A+
Sbjct: 73 KDKQSALDVHNI--IKHHRGSSPEKIKRILDKCGIDLTEELVLEVVNRNRSDWKPAYILS 130
Query: 161 LWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRK 220
KQ + S Y+ ++ +LGKMR+F+ + + M V +T +++ +
Sbjct: 131 QLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEM---SKRDGFVNEKTYEVLLNR 187
Query: 221 YCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEI 280
Y A V A+ F K FG + F GLL LCRYK+V+ AE L + F +I
Sbjct: 188 YAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDI 247
Query: 281 KSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFD 340
K+ N+ILNGWC ++ + EA+R W ++ + DVVSY ++++ +K KL K +L+
Sbjct: 248 KAMNMILNGWC-VLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYR 306
Query: 341 QMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNR 400
M + + PD K+ N VI AL + + EA+ + + + + P+VVTYNSL+K LCK R
Sbjct: 307 AMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIR 366
Query: 401 KIDEAKEVFNDMMKR--NITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIM 458
+ ++ E+ +M + + +P TF + + ++V +L++M + C T + Y +
Sbjct: 367 RTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNL 426
Query: 459 LIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKG 518
+ R + +W K ++V +IW+ M G+ D+ +Y + IHGL GK+ EA Y+ EM KG
Sbjct: 427 MFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKG 486
Query: 519 FLPEPKTEQMLQ 530
+PEP+TE +L
Sbjct: 487 MVPEPRTEMLLN 498
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 210/406 (51%), Gaps = 22/406 (5%)
Query: 156 AFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLL 215
+ FFLWA KQPGY HS SM+ IL KMR+F W LIE MR T P L+ P+ +
Sbjct: 114 GYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMR--KTNPELIEPELFV 171
Query: 216 IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNV 275
+++R++ + V +A+ ++G + F LL ALC+ +V++A + +
Sbjct: 172 VLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK 231
Query: 276 FPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKV 335
FP ++ F +L GWC EA+ V +M + G++ D+V + +++S Y+ + K+
Sbjct: 232 FPPNLRYFTSLLYGWCRE-GKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADA 290
Query: 336 FQLFDQMKNKKITPDRKVYNAVIHALAKG-RLVKEAVNLLQTMEKNNVTPDVVTYNSLIK 394
+ L + M+ + P+ Y +I AL + + + EA+ + ME+ D+VTY +LI
Sbjct: 291 YDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALIS 350
Query: 395 PLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYP 451
CK ID+ V +DM K+ + P+ T+ + EE EL++KM+ GC+P
Sbjct: 351 GFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHP 410
Query: 452 TIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYY 511
+ Y ++IR C+ ++ E ++WN M +G+S +++++I+G G + EA +++
Sbjct: 411 DLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHF 470
Query: 512 IEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDLEHNQLEDDTVE 557
EM +G P+ G + L +N + DD +E
Sbjct: 471 KEMVSRGIFSAPQY---------------GTLKSLLNNLVRDDKLE 501
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/383 (32%), Positives = 196/383 (51%), Gaps = 14/383 (3%)
Query: 151 NDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVT 210
NDW+ A FF W ++ G+ H+ ++ +I ILGK +F+ +W LI M G S+
Sbjct: 59 NDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIG--NTESVPN 116
Query: 211 PQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDE--FQGLLSALCRYKNVQDAEHL 268
T I+ ++Y V AI+ + F + DE F L+ ALC +K+V +AE L
Sbjct: 117 HVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLR---DETSFYNLVDALCEHKHVVEAEEL 173
Query: 269 LFCNKNV----FPLE-IKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIM 323
F KNV F + K N+IL GW L + E W +M G+ D+ SY+ M
Sbjct: 174 CF-GKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKE-YWKKMDTEGVTKDLFSYSIYM 231
Query: 324 SCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVT 383
KS K +K +L+ +MK++++ D YN VI A+ + V+ + + + M +
Sbjct: 232 DIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCE 291
Query: 384 PDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDK 443
P+V T+N++IK LC++ ++ +A + ++M KR P T+ F L E+ L +
Sbjct: 292 PNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSLFGR 351
Query: 444 MRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGK 503
M G P ++TY+ML+RKF RW L V +W M+E G + D ++Y +I L G
Sbjct: 352 MIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGM 411
Query: 504 VKEAHDYYIEMQRKGFLPEPKTE 526
+ A +Y EM +G P + E
Sbjct: 412 LDMAREYEEEMIERGLSPRRRPE 434
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 199/375 (53%), Gaps = 14/375 (3%)
Query: 150 RNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLV 209
R+ + AF FF WA ++ G+AH R Y+SM+SIL K R+F+T +++E M G L+
Sbjct: 172 RHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKG----LL 227
Query: 210 TPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL 269
T +T I ++ + A ++ +A+ F K++ F++G++ LL +L R K ++A+ L
Sbjct: 228 TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLF 287
Query: 270 FCNKNVFPLEIKSFNIILNGWC---NLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCY 326
K F + ++ ++LNGWC NLI EA R+W++M +G++ D+V++ ++
Sbjct: 288 DKLKERFTPNMMTYTVLLNGWCRVRNLI----EAARIWNDMIDQGLKPDIVAHNVMLEGL 343
Query: 327 SKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDV 386
+S K +LF MK+K P+ + Y +I K ++ A+ M + + PD
Sbjct: 344 LRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 403
Query: 387 VTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL---RVEEEVFELLDK 443
Y LI +K+D E+ +M ++ P +T++A +++ ++ E + +K
Sbjct: 404 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNK 463
Query: 444 MRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGK 503
M + P+I T+ M+++ + R + +W M + G+ D +SY VLI GL GK
Sbjct: 464 MIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGK 523
Query: 504 VKEAHDYYIEMQRKG 518
+EA Y EM KG
Sbjct: 524 SREACRYLEEMLDKG 538
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 160/352 (45%), Gaps = 28/352 (7%)
Query: 204 TGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLS------ALC 257
TG S V T + + C V I+ +A R + +DE + LS L
Sbjct: 117 TGVSCVESSTNPEEVERVCKV------IDELFALDR-NMEAVLDEMKLDLSHDLIVEVLE 169
Query: 258 RYKNVQDAEHLLFC---NKNVFPLEIKSFNIILNGWCNLIVSAREAE---RVWHEMSKRG 311
R+++ + FC + F + +++N +++ ++ R+ E V EM +G
Sbjct: 170 RFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMS----ILAKTRQFETMVSVLEEMGTKG 225
Query: 312 IQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAV 371
+ + ++ M ++ + + K +F+ MK K + N ++ +L + +L KEA
Sbjct: 226 LL-TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ 284
Query: 372 NLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL 431
L + K TP+++TY L+ C+ R + EA ++NDM+ + + P I + L
Sbjct: 285 VLFDKL-KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGL 343
Query: 432 ---RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDR 488
R + + +L M+ G P + +Y ++IR FC+ ++ + ++ M + G+ D
Sbjct: 344 LRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 403
Query: 489 SSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTE 540
+ Y LI G K+ ++ EMQ KG P+ KT L ++ ++ E
Sbjct: 404 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPE 455
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 113/271 (41%), Gaps = 17/271 (6%)
Query: 149 IRNDWEAA--FTFFLWAGKQPG-YAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTG 205
+RN EAA + + G +P AH+V M+ L + RK A L VM+ G
Sbjct: 311 VRNLIEAARIWNDMIDQGLKPDIVAHNV-----MLEGLLRSRKKSDAIKLFHVMKSKGPC 365
Query: 206 PSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDA 265
P++ ++ IMIR +C + AI F G Q + L++ K +
Sbjct: 366 PNV---RSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTV 422
Query: 266 EHLL-FCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMS 324
LL + P + K++N ++ N + A R++++M + I+ + ++ IM
Sbjct: 423 YELLKEMQEKGHPPDGKTYNALIKLMANQKM-PEHATRIYNKMIQNEIEPSIHTFNMIMK 481
Query: 325 CYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTP 384
Y + ++++M K I PD Y +I L +EA L+ M +
Sbjct: 482 SYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKT 541
Query: 385 DVVTYNSLIKPLCKNRKIDEAKEVFNDMMKR 415
++ YN + + E+F ++ +R
Sbjct: 542 PLIDYNKFAADFHRGGQ----PEIFEELAQR 568
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 200/375 (53%), Gaps = 14/375 (3%)
Query: 150 RNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLV 209
R+ + AF FF WA ++ G+AH+ R Y+SM+SIL K R+F+T +++E M G L+
Sbjct: 172 RHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKG----LL 227
Query: 210 TPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL 269
T +T I ++ + A ++ +A+ F K++ F++G++ LL +L R K ++A+ L
Sbjct: 228 TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLF 287
Query: 270 FCNKNVFPLEIKSFNIILNGWC---NLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCY 326
K F + ++ ++LNGWC NLI EA R+W++M G++ D+V++ ++
Sbjct: 288 DKLKERFTPNMMTYTVLLNGWCRVRNLI----EAARIWNDMIDHGLKPDIVAHNVMLEGL 343
Query: 327 SKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDV 386
+S K +LF MK+K P+ + Y +I K ++ A+ M + + PD
Sbjct: 344 LRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 403
Query: 387 VTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL---RVEEEVFELLDK 443
Y LI +K+D E+ +M ++ P +T++A +++ ++ E + +K
Sbjct: 404 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNK 463
Query: 444 MRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGK 503
M + P+I T+ M+++ + R + +W+ M + G+ D +SY VLI GL GK
Sbjct: 464 MIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGK 523
Query: 504 VKEAHDYYIEMQRKG 518
+EA Y EM KG
Sbjct: 524 SREACRYLEEMLDKG 538
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 159/352 (45%), Gaps = 28/352 (7%)
Query: 204 TGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLS------ALC 257
TG S V T + + C V I+ +A R + +DE + LS L
Sbjct: 117 TGVSCVESSTNPEEVERVCKV------IDELFALDR-NMEAVLDEMKLDLSHDLIVEVLE 169
Query: 258 RYKNVQDAEHLLFC---NKNVFPLEIKSFNIILNGWCNLIVSAREAE---RVWHEMSKRG 311
R+++ + FC + F +++N +++ ++ R+ E V EM +G
Sbjct: 170 RFRHARKPAFRFFCWAAERQGFAHASRTYNSMMS----ILAKTRQFETMVSVLEEMGTKG 225
Query: 312 IQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAV 371
+ + ++ M ++ + + K +F+ MK K + N ++ +L + +L KEA
Sbjct: 226 LL-TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ 284
Query: 372 NLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFR-I 430
L + K TP+++TY L+ C+ R + EA ++NDM+ + P I + +
Sbjct: 285 VLFDKL-KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGL 343
Query: 431 LRV--EEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDR 488
LR + + +L M+ G P + +Y ++IR FC+ ++ + ++ M + G+ D
Sbjct: 344 LRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 403
Query: 489 SSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTE 540
+ Y LI G K+ ++ EMQ KG P+ KT L ++ ++ E
Sbjct: 404 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPE 455
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 97/235 (41%), Gaps = 10/235 (4%)
Query: 182 ILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFG 241
+L M+K D A L VM+ G P++ ++ IMIR +C + AI F G
Sbjct: 343 LLRSMKKSD-AIKLFHVMKSKGPCPNV---RSYTIMIRDFCKQSSMETAIEYFDDMVDSG 398
Query: 242 FQVGIDEFQGLLSALCRYKNVQDAEHLL-FCNKNVFPLEIKSFNIILNGWCNLIVSAREA 300
Q + L++ K + LL + P + K++N ++ N +
Sbjct: 399 LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKM-PEHG 457
Query: 301 ERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHA 360
R++++M + I+ + ++ IM Y + ++D+M K I PD Y +I
Sbjct: 458 TRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRG 517
Query: 361 LAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKR 415
L +EA L+ M + ++ YN + + E+F ++ +R
Sbjct: 518 LISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ----PEIFEELAQR 568
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 199/375 (53%), Gaps = 14/375 (3%)
Query: 150 RNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLV 209
R+ + AF FF WA ++ G+AH R Y+SM+SIL K R+F+T +++E M G L+
Sbjct: 171 RHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKG----LL 226
Query: 210 TPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL 269
T +T I ++ + A ++ +A+ F K++ F++G++ LL +L R K ++A+ L
Sbjct: 227 TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLF 286
Query: 270 FCNKNVFPLEIKSFNIILNGWC---NLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCY 326
K F + ++ ++LNGWC NLI EA R+W++M G++ D+V++ ++
Sbjct: 287 DKLKERFTPNMMTYTVLLNGWCRVRNLI----EAARIWNDMIDHGLKPDIVAHNVMLEGL 342
Query: 327 SKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDV 386
+S K +LF MK+K P+ + Y +I K ++ A+ M + + PD
Sbjct: 343 LRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 402
Query: 387 VTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL---RVEEEVFELLDK 443
Y LI +K+D E+ +M ++ P +T++A +++ ++ E + +K
Sbjct: 403 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNK 462
Query: 444 MRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGK 503
M + P+I T+ M+++ + R + +W+ M + G+ D +SY VLI GL GK
Sbjct: 463 MIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGK 522
Query: 504 VKEAHDYYIEMQRKG 518
+EA Y EM KG
Sbjct: 523 SREACRYLEEMLDKG 537
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 160/352 (45%), Gaps = 28/352 (7%)
Query: 204 TGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLS------ALC 257
TG S V T + + C V I+ +A R + +DE + LS L
Sbjct: 116 TGVSCVESSTNPEEVERVCKV------IDELFALDR-NMEAVLDEMKLDLSHDLIVEVLE 168
Query: 258 RYKNVQDAEHLLFC---NKNVFPLEIKSFNIILNGWCNLIVSAREAE---RVWHEMSKRG 311
R+++ + FC + F + +++N +++ ++ R+ E V EM +G
Sbjct: 169 RFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMS----ILAKTRQFETMVSVLEEMGTKG 224
Query: 312 IQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAV 371
+ + ++ M ++ + + K +F+ MK K + N ++ +L + +L KEA
Sbjct: 225 LL-TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ 283
Query: 372 NLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFR-I 430
L + K TP+++TY L+ C+ R + EA ++NDM+ + P I + +
Sbjct: 284 VLFDKL-KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGL 342
Query: 431 LRV--EEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDR 488
LR + + +L M+ G P + +Y ++IR FC+ ++ + ++ M + G+ D
Sbjct: 343 LRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 402
Query: 489 SSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTE 540
+ Y LI G K+ ++ EMQ KG P+ KT L ++ ++ E
Sbjct: 403 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPE 454
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 97/236 (41%), Gaps = 10/236 (4%)
Query: 181 SILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRF 240
+L M+K D A L VM+ G P++ ++ IMIR +C + AI F
Sbjct: 341 GLLRSMKKSD-AIKLFHVMKSKGPCPNV---RSYTIMIRDFCKQSSMETAIEYFDDMVDS 396
Query: 241 GFQVGIDEFQGLLSALCRYKNVQDAEHLL-FCNKNVFPLEIKSFNIILNGWCNLIVSARE 299
G Q + L++ K + LL + P + K++N ++ N +
Sbjct: 397 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKM-PEH 455
Query: 300 AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIH 359
R++++M + I+ + ++ IM Y + ++D+M K I PD Y +I
Sbjct: 456 GTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIR 515
Query: 360 ALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKR 415
L +EA L+ M + ++ YN + + E+F ++ +R
Sbjct: 516 GLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ----PEIFEELAQR 567
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 204/396 (51%), Gaps = 15/396 (3%)
Query: 156 AFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLL 215
A + F WA Q G+ H+ Y+++I LGK+++F W+L++ M+ L++ +T
Sbjct: 111 ALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKA----KKLLSKETFA 166
Query: 216 IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL-FCNKN 274
++ R+Y R V AI F+ + FGF++ +F +L L + +NV DA+ + K
Sbjct: 167 LISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKK 226
Query: 275 VFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYK 334
F +IKS+ I+L GW + R + V EM G + DVV+Y I++ + K+ K +
Sbjct: 227 RFEPDIKSYTILLEGWGQELNLLR-VDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEE 285
Query: 335 VFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIK 394
+ F++M+ + P ++ ++I+ L + + +A+ + + + + TYN+L+
Sbjct: 286 AIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVG 345
Query: 395 PLCKNRKIDEAKEVFNDMMKRNITPTIRTF----HAFFRILRVEEEVFELLDKMRELGCY 450
C ++++++A + ++M + + P RT+ H R+ R +E +E+ M C
Sbjct: 346 AYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQR-SKEAYEVYQTM---SCE 401
Query: 451 PTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDY 510
PT+ TY +++R FC +LD KIW+ M+ GV + LI L K+ EA +Y
Sbjct: 402 PTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEY 461
Query: 511 YIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDL 546
+ EM G P L+ L +G + +VTDL
Sbjct: 462 FNEMLDVGIRPPGHMFSRLKQTLLD-EGRKDKVTDL 496
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 192/381 (50%), Gaps = 13/381 (3%)
Query: 150 RNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLV 209
RN + FF W+ KQ Y HSVR YH MI K+R++ W+LI MR ++
Sbjct: 111 RNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRK----KKML 166
Query: 210 TPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL 269
+T I++RKY + V AI F +++ + F GLLSALC+ KNV+ A+ +
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 270 FCNKNVFPLEIKSFNIILNGWCNL--IVSAREAERVWHEMSKRGIQHDVVSYASIMSCYS 327
++ F + K+++I+L GW + ARE V+ EM G D+V+Y+ ++
Sbjct: 227 ENMRDRFTPDSKTYSILLEGWGKEPNLPKARE---VFREMIDAGCHPDIVTYSIMVDILC 283
Query: 328 KSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVV 387
K+ ++ + + M P +Y+ ++H ++EAV+ ME++ + DV
Sbjct: 284 KAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVA 343
Query: 388 TYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFR--ILRVE-EEVFELLDKM 444
+NSLI CK ++ V +M + +TP ++ + R I R E +E F++ KM
Sbjct: 344 VFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM 403
Query: 445 RELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKV 504
++ C P +TY M+I+ FC ++++ K+W MR+ GV ++ VLI+GL
Sbjct: 404 IKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTT 462
Query: 505 KEAHDYYIEMQRKGFLPEPKT 525
++A EM G P T
Sbjct: 463 QKACVLLEEMIEMGIRPSGVT 483
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 212/447 (47%), Gaps = 15/447 (3%)
Query: 107 QDVKTILDIMHEPGSRPSEIKHKLEXXXXXXXXXXXXXXXXXIRNDWEAAFTFFLWAGKQ 166
+D+ + D +++ + ++ +L N W A+ FF+WA Q
Sbjct: 100 EDIDKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQ 159
Query: 167 PGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRD 226
GY HS Y++M+ +LGK R FD W L+ M LVT T+ ++R+
Sbjct: 160 TGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEES-KLVTLDTMSKVMRRLAKSGK 218
Query: 227 VGRAINTFYAF-KRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNI 285
+A++ F K +G + L+ AL + +++ A + + + ++FNI
Sbjct: 219 YNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNI 278
Query: 286 ILNGWCNLIVSAR---EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQM 342
+++G+C AR +A + M DVV+Y S + Y K +V ++ ++M
Sbjct: 279 LIHGFCK----ARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEM 334
Query: 343 KNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKI 402
+ P+ Y V+H+L K + V EA+ + + M+++ PD Y+SLI L K +
Sbjct: 335 RENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRF 394
Query: 403 DEAKEVFNDMMKRNITPTIRTFHAFFRIL---RVEEEVFELLDKMRE---LGCYPTIETY 456
+A E+F DM + + + ++ +E LL +M + C P +ETY
Sbjct: 395 KDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETY 454
Query: 457 IMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQR 516
L++ C +K+ + + + M ++ VS D S+YI+LI GL ++GKV+EA ++ E R
Sbjct: 455 APLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVR 514
Query: 517 KGFLPEPKTEQMLQAWLSGRQGTEGQV 543
KG +P T +ML L + E ++
Sbjct: 515 KGMVPRDSTCKMLVDELEKKNMAEAKL 541
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 183/390 (46%), Gaps = 7/390 (1%)
Query: 154 EAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQT 213
EA TFF WA ++PG V Y ++ LG+ + F ++++ M G P L +
Sbjct: 132 EAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDL---EC 188
Query: 214 LLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNK 273
L I + + V V RAI F + FG + + F LL LC +V A+ + K
Sbjct: 189 LTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKK 248
Query: 274 NVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLY 333
P + S+NI+++GW L E E+V EM + G D +SY+ ++ ++ ++
Sbjct: 249 GNIPFDSCSYNIMISGWSKL-GEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRIN 307
Query: 334 KVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLI 393
++FD +K+K PD VYNA+I R E++ + M P++ TY+ L+
Sbjct: 308 DSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLV 367
Query: 394 KPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRV---EEEVFELLDKMRELGCY 450
L K RK+ +A E+F +M+ R + PT +F + L + K R+ GC
Sbjct: 368 SGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCR 427
Query: 451 PTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDY 510
+ Y +L+++ R+ K + +W+ M+E G D Y ++ GL + G ++ A
Sbjct: 428 ISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLV 487
Query: 511 YIEMQRKGFLPEPKTEQMLQAWLSGRQGTE 540
E RKGF P L + L TE
Sbjct: 488 MEEAMRKGFCPNRFVYSRLSSKLMASNKTE 517
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 189/386 (48%), Gaps = 10/386 (2%)
Query: 156 AFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLL 215
A FFLWA + P +AHS+ YH ++ ILG ++F W+ + R ++ +
Sbjct: 85 AHRFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFE--ISSKVFW 142
Query: 216 IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKN- 274
I+ R Y A F FG + +D+ LL +LC K+V A+ K
Sbjct: 143 IVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGF 202
Query: 275 -VFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLY 333
+ P K+++I++ GW I A A +V+ EM +R D+++Y +++ KS +
Sbjct: 203 GIVP-SAKTYSILVRGWAR-IRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVD 260
Query: 334 KVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLI 393
+++F +M N + PD + IHA V A +L M++ ++ P+V T+N +I
Sbjct: 261 GGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHII 320
Query: 394 KPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEV---FELLDKMRELGCY 450
K LCKN K+D+A + ++M+++ P T+++ EV +LL +M C
Sbjct: 321 KTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCL 380
Query: 451 PTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFL-NGKVKEAHD 509
P TY M+++ R + D +IW M E ++Y V+IHGL GK++EA
Sbjct: 381 PDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACR 440
Query: 510 YYIEMQRKGFLPEPKTEQMLQAWLSG 535
Y+ M +G P T +ML+ L G
Sbjct: 441 YFEMMIDEGIPPYSTTVEMLRNRLVG 466
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 198/370 (53%), Gaps = 16/370 (4%)
Query: 159 FFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNL-IEVMRGGGTGPSLVTPQTLLIM 217
F+ +A G+ HS +M+ ILG+ RKFD W L IE R SL++P+T+ ++
Sbjct: 94 FYRYASAIRGFYHSSFSLDTMLYILGRNRKFDQIWELLIETKR---KDRSLISPRTMQVV 150
Query: 218 IRKYCAVRDVGRAINTFYAFKRFG---FQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKN 274
+ + + V + + +F+ FKR F F LL LC+ K++ DA ++ K+
Sbjct: 151 LGRVAKLCSVRQTVESFWKFKRLVPDFFDTAC--FNALLRTLCQEKSMTDARNVYHSLKH 208
Query: 275 VFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYK 334
F ++++FNI+L+GW S+ EAE + EM +G++ DVV+Y S++ Y K ++ K
Sbjct: 209 QFQPDLQTFNILLSGW----KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEK 264
Query: 335 VFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIK 394
++L D+M+ ++ TPD Y VI L +A +L+ M++ PDV YN+ I+
Sbjct: 265 AYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIR 324
Query: 395 PLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEV---FELLDKMRELGCYP 451
C R++ +A ++ ++M+K+ ++P T++ FFR+L + ++ +EL +M C P
Sbjct: 325 NFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLP 384
Query: 452 TIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYY 511
++ + LI+ F R K+D ++W M G VL+ L KV+EA
Sbjct: 385 NTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCL 444
Query: 512 IEMQRKGFLP 521
+EM KG P
Sbjct: 445 LEMVEKGHRP 454
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 108/214 (50%), Gaps = 7/214 (3%)
Query: 315 DVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLL 374
D + +++ + + ++ +K++ PD + +N + L+ + +EA
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNIL---LSGWKSSEEAEAFF 234
Query: 375 QTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRV- 433
+ M+ + PDVVTYNSLI CK+R+I++A ++ + M + TP + T+ L +
Sbjct: 235 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 294
Query: 434 --EEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSY 491
++ E+L +M+E GCYP + Y IR FC R+L + K+ + M + G+S + ++Y
Sbjct: 295 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTY 354
Query: 492 IVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT 525
+ L L + + + Y+ M LP ++
Sbjct: 355 NLFFRVLSLANDLGRSWELYVRMLGNECLPNTQS 388
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 111/220 (50%), Gaps = 13/220 (5%)
Query: 310 RGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKE 369
RG H S +++ ++ K ++++L + K K DR + + + GR+ K
Sbjct: 102 RGFYHSSFSLDTMLYILGRNRKFDQIWELLIETKRK----DRSLISPRTMQVVLGRVAK- 156
Query: 370 AVNLLQTMEK----NNVTPD---VVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIR 422
++ QT+E + PD +N+L++ LC+ + + +A+ V++ + K P ++
Sbjct: 157 LCSVRQTVESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSL-KHQFQPDLQ 215
Query: 423 TFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMRED 482
TF+ + EE ++M+ G P + TY LI +C+ R++++ +K+ + MRE+
Sbjct: 216 TFNILLSGWKSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREE 275
Query: 483 GVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
+ D +Y +I GL L G+ +A + EM+ G P+
Sbjct: 276 EETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPD 315
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 214/440 (48%), Gaps = 21/440 (4%)
Query: 158 TFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIM 217
+ F WA +PG+ S + S+++ L K R+F+ AW+L+ G +LV+ T +++
Sbjct: 120 SVFKWAEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVL 179
Query: 218 IRKYCAVRDVGRAINTFYAFKRF----GFQVGIDEFQGLLSALCRYKNVQDAEHLL---- 269
IR+Y V +AI F + + + + LL ALC+ +V++A L
Sbjct: 180 IRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIG 239
Query: 270 -FCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSK 328
+ N P ++ FNI+LNGW ++AE++W EM ++ VV+Y +++ Y +
Sbjct: 240 GTMDSNWVP-SVRIFNILLNGWFR-SRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCR 297
Query: 329 SSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVT 388
++ ++ ++MK ++ + V+N +I L + + EA+ +++ P +VT
Sbjct: 298 MRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVT 357
Query: 389 YNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMR 445
YNSL+K CK + A ++ MM R + PT T++ FF+ EE L K+
Sbjct: 358 YNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLI 417
Query: 446 ELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVK 505
E G P TY ++++ C KL ++ M+ G+ D + +LIH L ++
Sbjct: 418 EAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLE 477
Query: 506 EAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTE------GQVTDLEHNQLEDDTVEKK 559
EA + + R+G +P+ T +M+ L + ++ ++ L H++ +T +
Sbjct: 478 EAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSSLPHSKKLPNTYREA 537
Query: 560 VKATPSKFDKEKAFLREPET 579
V A P K D+ K+ L E
Sbjct: 538 VDAPPDK-DRRKSILHRAEA 556
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 162/335 (48%), Gaps = 7/335 (2%)
Query: 169 YAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVG 228
Y H + I I ++ T W+LI MR GPS P+T I+ +Y +
Sbjct: 87 YVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPS---PKTFAIVAERYASAGKPD 143
Query: 229 RAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIILN 288
+A+ F G + F +L LC+ K V+ A L + F ++ ++N+ILN
Sbjct: 144 KAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILN 203
Query: 289 GWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKIT 348
GWC LI +A V EM +RGI ++ +Y +++ + ++ ++ ++ F +MK +
Sbjct: 204 GWC-LIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCE 262
Query: 349 PDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEV 408
D Y V+H +K A N+ M + V P V TYN++I+ LCK ++ A +
Sbjct: 263 IDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVM 322
Query: 409 FNDMMKRNITPTIRTFHAFFRILRVEEEVF---ELLDKMRELGCYPTIETYIMLIRKFCR 465
F +M++R P + T++ R L E EL+ +M GC P +TY M+IR +
Sbjct: 323 FEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSE 382
Query: 466 WRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFL 500
++++ ++ M + +Y +LI G+F+
Sbjct: 383 CSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFV 417
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 116/239 (48%), Gaps = 4/239 (1%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
+A +++ M + G D+ S+ +I+ KS ++ K ++LF ++ + + D YN ++
Sbjct: 144 KAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVIL 202
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
+ + +A+ +L+ M + + P++ TYN+++K + +I A E F +M KR+
Sbjct: 203 NGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCE 262
Query: 419 PTIRTFHAFFRILRVEEEV---FELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKI 475
+ T+ V E+ + D+M G P++ TY +I+ C+ ++ +
Sbjct: 263 IDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVM 322
Query: 476 WNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLS 534
+ M G + ++Y VLI GLF G+ + M+ +G P +T M+ + S
Sbjct: 323 FEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYS 381
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 113/237 (47%), Gaps = 4/237 (1%)
Query: 314 HDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNL 373
HD S+ + ++ V+ L +M++ +I P K + V A +AV L
Sbjct: 89 HDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKL 148
Query: 374 LQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFR---I 430
M ++ D+ ++N+++ LCK++++++A E+F + R T+ T++ +
Sbjct: 149 FLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTV-TYNVILNGWCL 207
Query: 431 LRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSS 490
++ + E+L +M E G P + TY +++ F R ++ ++ + M++ D +
Sbjct: 208 IKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVT 267
Query: 491 YIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDLE 547
Y ++HG + G++K A + + EM R+G LP T + L + E V E
Sbjct: 268 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFE 324
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/265 (17%), Positives = 108/265 (40%), Gaps = 41/265 (15%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G + +++++ +L K ++ + A+ L +RG + V T +++ +C ++
Sbjct: 156 GCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFS----VDTVTYNVILNGWCLIKRT 211
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDA-EHLLFCNKNVFPLEIKSFNII 286
+A+ G + + +L R ++ A E L K +++ ++ +
Sbjct: 212 PKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTV 271
Query: 287 LNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKL-------------- 332
++G+ + + A V+ EM + G+ V +Y +++ K +
Sbjct: 272 VHGF-GVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG 330
Query: 333 -------YKVF--------------QLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAV 371
Y V +L +M+N+ P+ + YN +I ++ V++A+
Sbjct: 331 YEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKAL 390
Query: 372 NLLQTMEKNNVTPDVVTYNSLIKPL 396
L + M + P++ TYN LI +
Sbjct: 391 GLFEKMGSGDCLPNLDTYNILISGM 415
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 181/384 (47%), Gaps = 24/384 (6%)
Query: 154 EAAFTFFLWAGKQPGYAHSVREYHSMISILG----KMRKFDTAWNLIEVMRGGGTGPSLV 209
+ AF FF WAG Q Y+H Y+ MI IL K ++F ++++ M+ LV
Sbjct: 140 KTAFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLV 199
Query: 210 TPQTLLIMIRKYCAVRDVGRAINTFYAFK-----RFGFQVGIDEFQGLLSALCRYKNVQD 264
LL ++RKYC R + F R Q I+ F LL ALC+ V++
Sbjct: 200 --DVLLEILRKYCE-----RYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKE 252
Query: 265 AEHLLFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMS 324
E LL ++ + +FN++ GWC + ++A ++ EM + G + + +Y + +
Sbjct: 253 GEALLRRMRHRVKPDANTFNVLFFGWCR-VRDPKKAMKLLEEMIEAGHKPENFTYCAAID 311
Query: 325 CYSKSSKLYKVFQLFDQMKNKKIT---PDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNN 381
+ ++ + + LFD M K P K + +I ALAK +E L+ M
Sbjct: 312 TFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTG 371
Query: 382 VTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL---RVEEEVF 438
PDV TY +I+ +C K+DEA + ++M + P I T++ F R+L R +E
Sbjct: 372 CLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEAL 431
Query: 439 ELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGL 498
+L +M E C P+++TY MLI F D F W M + D +Y +I+GL
Sbjct: 432 KLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGL 491
Query: 499 FLNGKVKEAHDYYIEMQRKGF-LP 521
F + KEA E+ KG LP
Sbjct: 492 FDCHRAKEACFLLEEVVNKGLKLP 515
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 14/207 (6%)
Query: 297 AREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNA 356
A E + M G DV +Y ++ + K+ + ++ D+M NK PD YN
Sbjct: 357 AEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNC 416
Query: 357 VIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRN 416
+ L + R EA+ L M ++ P V TYN LI + D A + +M KR+
Sbjct: 417 FLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRD 476
Query: 417 ITPTIRTFHA----FFRILRVEEEVF---ELLDKMRELGCYPTIETYIMLIRKFCRWRKL 469
+ T+ A F R +E F E+++K +L Y ++++M + + + +
Sbjct: 477 CVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLP-YRVFDSFLMRLSEVGNLKAI 535
Query: 470 DEVF----KIWN--MMREDGVSHDRSS 490
+V K +N M R +S R S
Sbjct: 536 HKVSEHMKKFYNHSMARRFALSEKRKS 562
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 185/388 (47%), Gaps = 15/388 (3%)
Query: 150 RNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLV 209
R+DW +A WA G+ HS Y + ILGK +K+D +E MRG LV
Sbjct: 98 RDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGD----KLV 153
Query: 210 TPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL 269
T T+ ++R++ + A+ F FG + + LL LC+ K V+ A +L
Sbjct: 154 TLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL 213
Query: 270 FCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVW--HEMSKRGIQHDVVSYASIMSCYS 327
K+ +FNI ++GWC + R E +W EM G + V+SY +I+ CY
Sbjct: 214 LQLKSHITPNAHTFNIFIHGWCK---ANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYC 270
Query: 328 KSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVV 387
+ + KV+++ +M+ P+ Y ++ +L + +EA+ + M+++ PD +
Sbjct: 271 QQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSL 330
Query: 388 TYNSLIKPLCKNRKIDEAKEVFN-DMMKRNITPTIRTFHAFFRIL---RVEEEVFELLDK 443
YN LI L + +++EA+ VF +M + ++ T+++ + E++ ELL +
Sbjct: 331 FYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKE 390
Query: 444 MRELG-CYPTIETYIMLIRKFCRWRKLDEVFKIW-NMMREDGVSHDRSSYIVLIHGLFLN 501
M C P + TY L+R + + EV K+ M+ + +S D S+Y LI L
Sbjct: 391 MESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRA 450
Query: 502 GKVKEAHDYYIEMQRKGFLPEPKTEQML 529
+ A+ + EM + P +T +L
Sbjct: 451 NMCEWAYCLFEEMISQDITPRHRTCLLL 478
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 185/388 (47%), Gaps = 15/388 (3%)
Query: 150 RNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLV 209
R+DW +A WA G+ HS Y + ILGK +K+D +E MRG LV
Sbjct: 98 RDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGD----KLV 153
Query: 210 TPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL 269
T T+ ++R++ + A+ F FG + + LL LC+ K V+ A +L
Sbjct: 154 TLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL 213
Query: 270 FCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVW--HEMSKRGIQHDVVSYASIMSCYS 327
K+ +FNI ++GWC + R E +W EM G + V+SY +I+ CY
Sbjct: 214 LQLKSHITPNAHTFNIFIHGWCK---ANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYC 270
Query: 328 KSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVV 387
+ + KV+++ +M+ P+ Y ++ +L + +EA+ + M+++ PD +
Sbjct: 271 QQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSL 330
Query: 388 TYNSLIKPLCKNRKIDEAKEVFN-DMMKRNITPTIRTFHAFFRIL---RVEEEVFELLDK 443
YN LI L + +++EA+ VF +M + ++ T+++ + E++ ELL +
Sbjct: 331 FYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKE 390
Query: 444 MRELG-CYPTIETYIMLIRKFCRWRKLDEVFKIW-NMMREDGVSHDRSSYIVLIHGLFLN 501
M C P + TY L+R + + EV K+ M+ + +S D S+Y LI L
Sbjct: 391 MESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRA 450
Query: 502 GKVKEAHDYYIEMQRKGFLPEPKTEQML 529
+ A+ + EM + P +T +L
Sbjct: 451 NMCEWAYCLFEEMISQDITPRHRTCLLL 478
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 197/414 (47%), Gaps = 15/414 (3%)
Query: 156 AFTFFLWAGKQPGYAH-SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTL 214
+ FF WA + Y H S Y+ MI + GK+R+FD AW+LI++M+ S+ +T
Sbjct: 133 SLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISI---ETF 189
Query: 215 LIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKN 274
I+IR+Y A++ F + +G F ++S L R + +A+ K+
Sbjct: 190 TILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKD 249
Query: 275 VFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYK 334
F ++ + ++ GWC EAE+V+ EM GI+ +V +Y+ ++ + ++ +
Sbjct: 250 RFEPDVIVYTNLVRGWCR-AGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISR 308
Query: 335 VFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIK 394
+F M + P+ +N ++ K ++ + + M+K PD +TYN LI+
Sbjct: 309 AHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIE 368
Query: 395 PLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEV---FELLDKMRELGCYP 451
C++ ++ A +V N M+K+ TF+ FR + + +V + KM E C P
Sbjct: 369 AHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEP 428
Query: 452 TIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYY 511
TY +L+R F + D V K+ M + V + ++Y +L+ G A+ +
Sbjct: 429 NTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLF 488
Query: 512 IEM-QRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDLEHNQLEDDTVEKKVKATP 564
EM + K P +M+ A L R+ GQ+ +H +L + ++K + A P
Sbjct: 489 KEMVEEKCLTPSLSLYEMVLAQL--RRA--GQLK--KHEELVEKMIQKGLVARP 536
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 195/419 (46%), Gaps = 45/419 (10%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
S+ E++ ++S + KM+KFD +L E M+ G +L T I+I +C + A+
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN---ILINCFCRRSQISLAL 65
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNG 289
+ G++ I LL+ C K + DA L+ P I +F +++G
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI-TFTTLIHG 124
Query: 290 WCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITP 349
L A EA + M +RG Q ++V+Y +++ K + F L ++M+ KI
Sbjct: 125 L-FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 183
Query: 350 DRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVF 409
D ++N +I +L K R V +A+NL + ME + P+VVTY+SLI LC + +A ++
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 410 NDMMKRNITPTIRTFHAFFRIL-------------------RVEEEVF------------ 438
+DM+++ I P + TF+A ++ ++F
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 439 ELLDKMREL-------GCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSY 491
+ LDK +++ C+P ++TY LI+ FC+ +++++ +++ M G+ D +Y
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363
Query: 492 IVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDLEHNQ 550
LI GLF +G A + +M G P+ T +L L E + ++ Q
Sbjct: 364 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 422
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 170/371 (45%), Gaps = 14/371 (3%)
Query: 166 QPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVR 225
Q G ++ Y +++ L K D A+NL+ M +V T+ I C R
Sbjct: 143 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI---IDSLCKYR 199
Query: 226 DVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSF 283
V A+N F + G + + + L+S LC Y DA LL K + P + +F
Sbjct: 200 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP-NLVTF 258
Query: 284 NIILNGWCNLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQ 341
N +++ + + + EAE++ +M KR I D+ +Y S+++ + +L K Q+F+
Sbjct: 259 NALIDAF---VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF 315
Query: 342 MKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRK 401
M +K PD YN +I K + V++ L + M + D VTY +LI+ L +
Sbjct: 316 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 375
Query: 402 IDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIM 458
D A++VF M+ + P I T+ L E+ E+ D M++ I Y
Sbjct: 376 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 435
Query: 459 LIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKG 518
+I C+ K+D+ + ++ + GV + +Y +I GL ++EA+ +M+ G
Sbjct: 436 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Query: 519 FLPEPKTEQML 529
LP+ T L
Sbjct: 496 PLPDSGTYNTL 506
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 175/389 (44%), Gaps = 45/389 (11%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G +H++ Y+ +I+ + + A L+ M G PS+VT +LL YC + +
Sbjct: 40 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL---NGYCHGKRI 96
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNI 285
A+ G++ F L+ L + +A L+ + P + ++ +
Sbjct: 97 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP-NLVTYGV 155
Query: 286 ILNGWC---------------------------NLIVSA-------REAERVWHEMSKRG 311
++NG C N I+ + +A ++ EM +G
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215
Query: 312 IQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAV 371
I+ +VV+Y+S++SC + QL M KKI P+ +NA+I A K EA
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275
Query: 372 NLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFH----AF 427
L M K ++ PD+ TYNSLI C + ++D+AK++F M+ ++ P + T++ F
Sbjct: 276 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 335
Query: 428 FRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHD 487
+ RVE+ EL +M G TY LI+ D K++ M DGV D
Sbjct: 336 CKSKRVEDGT-ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 394
Query: 488 RSSYIVLIHGLFLNGKVKEAHDYYIEMQR 516
+Y +L+ GL NGK+++A + + MQ+
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQK 423
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 136/350 (38%), Gaps = 74/350 (21%)
Query: 150 RNDWEAAFTFF--LWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPS 207
R D + AF + A K V ++++I L K R D A NL + M G P+
Sbjct: 163 RGDIDLAFNLLNKMEAAKIEA---DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 219
Query: 208 LVTPQTLLIMIRKYCAVRDVGRAINTFYAFK----RFGFQVGIDEF-------------- 249
+VT +L+ + Y D + ++ K F ID F
Sbjct: 220 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHD 279
Query: 250 --------------QGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWC-- 291
L++ C + + A+ + +K+ FP ++ ++N ++ G+C
Sbjct: 280 DMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP-DLDTYNTLIKGFCKS 338
Query: 292 --------------------------NLIVS------AREAERVWHEMSKRGIQHDVVSY 319
LI A++V+ +M G+ D+++Y
Sbjct: 339 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 398
Query: 320 ASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEK 379
+ ++ + KL K ++FD M+ +I D +Y +I + K V + +L ++
Sbjct: 399 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 458
Query: 380 NNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFR 429
V P+VVTYN++I LC R + EA + M + P T++ R
Sbjct: 459 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIR 508
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 109/239 (45%), Gaps = 7/239 (2%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y+S+I+ + D A + E M P L T TL I+ +C + V F
Sbjct: 293 YNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTL---IKGFCKSKRVEDGTELFR 349
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCNL 293
G + L+ L + +A+ + + V P +I +++I+L+G CN
Sbjct: 350 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV-PPDIMTYSILLDGLCN- 407
Query: 294 IVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKV 353
+A V+ M K I+ D+ Y +++ K+ K+ + LF + K + P+
Sbjct: 408 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 467
Query: 354 YNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDM 412
YN +I L RL++EA LL+ M+++ PD TYN+LI+ ++ + E+ +M
Sbjct: 468 YNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 184/418 (44%), Gaps = 43/418 (10%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
S+ E+ ++S + KM KFD +L E M+ G +L T I+I +C + A+
Sbjct: 80 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS---ILINCFCRRSQLSLAL 136
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNV-FPLEIKSFNIILNGW 290
+ G++ I LL+ C + DA L+ + + + +FN +++G
Sbjct: 137 AVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGL 196
Query: 291 CNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPD 350
A EA + M +G Q D+V+Y +++ K + L +M+ KI P
Sbjct: 197 FRH-NRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPG 255
Query: 351 RKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFN 410
+YN +I AL + V +A+NL M+ + P+VVTYNSLI+ LC + +A + +
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 411 DMMKRNITPTIRTFHAFFRILRVEEEVFEL------------------------------ 440
DM++R I P + TF A E ++ E
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 441 -LDKMREL-------GCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYI 492
LD+ + + C+P + TY LI+ FC+ +++DE +++ M + G+ + +Y
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 493 VLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDLEHNQ 550
LIHG F + A + +M G LP+ T +L L E + E+ Q
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 176/377 (46%), Gaps = 26/377 (6%)
Query: 164 GKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCA 223
G QP + Y +++ L K D A +L++ M G P +V T+ I C
Sbjct: 216 GCQP----DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTI---IDALCN 268
Query: 224 VRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIK 281
++V A+N F G + + + L+ LC Y DA LL + + P +
Sbjct: 269 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP-NVV 327
Query: 282 SFNIILNGWCN---LIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQL 338
+F+ +++ + L+ EAE+++ EM KR I D+ +Y+S+++ + +L + +
Sbjct: 328 TFSALIDAFVKEGKLV----EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 383
Query: 339 FDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCK 398
F+ M +K P+ YN +I K + V E + L + M + + + VTY +LI +
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 443
Query: 399 NRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL----RVEEE--VFELLDKMRELGCYPT 452
R+ D A+ VF M+ + P I T+ L +VE VFE L + + P
Sbjct: 444 ARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM---EPD 500
Query: 453 IETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYI 512
I TY ++I C+ K+++ + ++ + GV + +Y ++ G G +EA +
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFR 560
Query: 513 EMQRKGFLPEPKTEQML 529
EM+ +G LP+ T L
Sbjct: 561 EMKEEGPLPDSGTYNTL 577
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 187/443 (42%), Gaps = 84/443 (18%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
GY ++++I L + + A L++ M G P LVT I++ C D+
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYG---IVVNGLCKRGDI 237
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNI 285
A++ ++ + G+ + ++ ALC YKNV DA +L NK + P + ++N
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP-NVVTYNS 296
Query: 286 ILNGWCNLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMK 343
++ CN R +A R+ +M +R I +VV++++++ + K KL + +L+D+M
Sbjct: 297 LIRCLCNY---GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353
Query: 344 NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKID 403
+ I PD Y+++I+ + EA ++ + M + P+VVTYN+LIK CK +++D
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVD 413
Query: 404 E-----------------------------------AKEVFNDMMKRNITPTIRTFHAFF 428
E A+ VF M+ + P I T+
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473
Query: 429 RIL----RVEEE--VFELLDKMR-------------------------ELGCY------- 450
L +VE VFE L + + +L C
Sbjct: 474 DGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 533
Query: 451 PTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDY 510
P + TY ++ FCR +E ++ M+E+G D +Y LI +G + +
Sbjct: 534 PNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAEL 593
Query: 511 YIEMQRKGFLPEPKTEQMLQAWL 533
EM+ F+ + T ++ L
Sbjct: 594 IREMRSCRFVGDASTIGLVTNML 616
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 126/283 (44%), Gaps = 12/283 (4%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
+A ++ +M K +V ++ ++S +K +K V L +QM+N I+ + Y+ +I
Sbjct: 64 DAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
+ + + A+ +L M K PD+VT NSL+ C +I +A + M++
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 419 PTIRTF----HAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFK 474
P TF H FR R E V L+D+M GC P + TY +++ C+ +D
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAV-ALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 475 IWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLS 534
+ M + + Y +I L V +A + + EM KG P T L L
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 535 GRQGTEGQVTDLEHNQLEDDTVEKKVKATPSKFDKE-KAFLRE 576
G+ +D ++L D +E+K+ F AF++E
Sbjct: 303 ----NYGRWSD--ASRLLSDMIERKINPNVVTFSALIDAFVKE 339
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 12/238 (5%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
+V Y+++I K ++ D L M G + VT TL I + R+ A
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL---IHGFFQARECDNAQ 451
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL-FCNKNVFPLEIKSFNIILNGW 290
F G I + LL LC V+ A + + ++ +I ++NI++ G
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511
Query: 291 CNLIVSAREAERVWH---EMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKI 347
C A + E W +S +G++ +VV+Y ++MS + + + LF +MK +
Sbjct: 512 C----KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567
Query: 348 TPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEA 405
PD YN +I A + + L++ M D T L+ + + ++D++
Sbjct: 568 LPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GLVTNMLHDGRLDKS 624
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 181/389 (46%), Gaps = 13/389 (3%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
S+ E+ ++S + KM KFD +L E M+ G +L T I I +C + A+
Sbjct: 74 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS---IFINYFCRRSQLSLAL 130
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNV---FPLEIKSFNIILN 288
+ G+ I LL+ C + +A L+ ++ V + + +F +++
Sbjct: 131 AILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV--DQMVEMGYQPDTVTFTTLVH 188
Query: 289 GWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKIT 348
G A EA + M +G Q D+V+Y ++++ K + L ++M+ KI
Sbjct: 189 GLFQH-NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE 247
Query: 349 PDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEV 408
D +YN +I L K + + +A +L ME + PDV TYN LI LC + +A +
Sbjct: 248 ADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRL 307
Query: 409 FNDMMKRNITPTIRTFHAFFRILRVEEEVFE---LLDKM-RELGCYPTIETYIMLIRKFC 464
+DM+++NI P + F+A E ++ E L D+M + C+P + Y LI+ FC
Sbjct: 308 LSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFC 367
Query: 465 RWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPK 524
++++++E +++ M + G+ + +Y LIHG F A + +M G P+
Sbjct: 368 KYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIM 427
Query: 525 TEQMLQAWLSGRQGTEGQVTDLEHNQLED 553
T +L L E + E+ Q D
Sbjct: 428 TYNILLDGLCNNGNVETALVVFEYMQKRD 456
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 183/391 (46%), Gaps = 24/391 (6%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
GY + +++ L + K A L+E M G P LVT + I C +
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV---INGLCKRGEP 231
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNI 285
A+N ++ + + + ++ LC+YK++ DA L K + P ++ ++N
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP-DVFTYNP 290
Query: 286 ILNGWCNLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQM- 342
+++ CN R +A R+ +M ++ I D+V + +++ + K KL + +L+D+M
Sbjct: 291 LISCLCNY---GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Query: 343 KNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKI 402
K+K PD YN +I K + V+E + + + M + + + VTY +LI + R
Sbjct: 348 KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC 407
Query: 403 DEAKEVFNDMMKRNITPTIRTFHAFFRIL----RVEEE--VFELLDKMRELGCYPTIETY 456
D A+ VF M+ + P I T++ L VE VFE + K R++ I TY
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQK-RDMKL--DIVTY 464
Query: 457 IMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQR 516
+I C+ K+++ + ++ + GV + +Y ++ G G +EA ++EM+
Sbjct: 465 TTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKE 524
Query: 517 KGFLPEPKT-EQMLQAWLSGRQGTEGQVTDL 546
G LP T +++A L R G E +L
Sbjct: 525 DGPLPNSGTYNTLIRARL--RDGDEAASAEL 553
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 180/398 (45%), Gaps = 41/398 (10%)
Query: 164 GKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCA 223
G QP + Y ++I+ L K + D A NL+ M G +V T+ I C
Sbjct: 210 GCQP----DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTI---IDGLCK 262
Query: 224 VRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIK 281
+ + A + F + G + + + L+S LC Y DA LL KN+ P ++
Sbjct: 263 YKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINP-DLV 321
Query: 282 SFNIILNGWCN---LIVSAREAERVWHEMSKRGIQH---DVVSYASIMSCYSKSSKLYKV 335
FN +++ + L+ EAE+++ EM K +H DVV+Y +++ + K ++ +
Sbjct: 322 FFNALIDAFVKEGKLV----EAEKLYDEMVKS--KHCFPDVVAYNTLIKGFCKYKRVEEG 375
Query: 336 FQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKP 395
++F +M + + + Y +IH + R A + + M + V PD++TYN L+
Sbjct: 376 MEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDG 435
Query: 396 LCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL----RVEEEVFELLDKMRELGCYP 451
LC N ++ A VF M KR++ I T+ L +VE+ ++L + G P
Sbjct: 436 LCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG-WDLFCSLSLKGVKP 494
Query: 452 TIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYY 511
+ TY ++ FCR +E ++ M+EDG + +Y LI +G + +
Sbjct: 495 NVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELI 554
Query: 512 IEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDLEHN 549
EM+ GF +G T G VT++ H+
Sbjct: 555 KEMRSCGF--------------AGDASTFGLVTNMLHD 578
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 94/243 (38%), Gaps = 40/243 (16%)
Query: 331 KLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYN 390
KL LF M + P ++ ++ A+AK ++L + M+ ++ ++ TY+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 391 SLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL----RVEEEVFELLDKMRE 446
I C+ ++ A + MMK P+I T ++ R+ E V L+D+M E
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV-ALVDQMVE 173
Query: 447 L-----------------------------------GCYPTIETYIMLIRKFCRWRKLDE 471
+ GC P + TY +I C+ + D
Sbjct: 174 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 233
Query: 472 VFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQA 531
+ N M + + D Y +I GL + +A D + +M+ KG P+ T L +
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
Query: 532 WLS 534
L
Sbjct: 294 CLC 296
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 102/245 (41%), Gaps = 15/245 (6%)
Query: 173 VREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAIN 232
V Y+++I K ++ + + M G + VT TL I + RD A
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL---IHGFFQARDCDNAQM 412
Query: 233 TFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL-FCNKNVFPLEIKSFNIILNGWC 291
F G I + LL LC NV+ A + + K L+I ++ ++ C
Sbjct: 413 VFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALC 472
Query: 292 NLIVSAREAERVWH---EMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKIT 348
A + E W +S +G++ +VV+Y ++MS + + + LF +MK
Sbjct: 473 ----KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPL 528
Query: 349 PDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEV 408
P+ YN +I A + + L++ M D T+ L+ + + ++D++
Sbjct: 529 PNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF-GLVTNMLHDGRLDKS--- 584
Query: 409 FNDMM 413
F DM+
Sbjct: 585 FLDML 589
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 173/366 (47%), Gaps = 41/366 (11%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
S+ ++ +++++ KM+KFD NL + ++ G L T L+ +C A
Sbjct: 71 SIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM---NCFCQSSQPYLAS 127
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIILNGWC 291
+ + GF+ P +I +F ++NG+C
Sbjct: 128 SFLGKMMKLGFE---------------------------------P-DIVTFTSLINGFC 153
Query: 292 NLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDR 351
L EA + ++M + GI+ DVV Y +I+ K+ + LFDQM+N I PD
Sbjct: 154 -LGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDV 212
Query: 352 KVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFND 411
+Y ++++ L ++A +LL+ M K + PDV+T+N+LI K K +A+E++N+
Sbjct: 213 VMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNE 272
Query: 412 MMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRK 468
M++ +I P I T+ + +E +E ++ M GC+P + Y LI FC+ +K
Sbjct: 273 MIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKK 332
Query: 469 LDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQM 528
+D+ KI+ M + G++ + +Y LI G GK A + + M +G P +T +
Sbjct: 333 VDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNV 392
Query: 529 LQAWLS 534
L L
Sbjct: 393 LLHCLC 398
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 190/404 (47%), Gaps = 18/404 (4%)
Query: 160 FLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIR 219
FL + G+ + + S+I+ + + A +++ M G P +V T+ I
Sbjct: 129 FLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTI---ID 185
Query: 220 KYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFP 277
C V A++ F + +G + + + L++ LC +DA+ LL + + P
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKP 245
Query: 278 LEIKSFNIILNGWCNLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKV 335
++ +FN +++ + + + +AE +++EM + I ++ +Y S+++ + + +
Sbjct: 246 -DVITFNALIDAF---VKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEA 301
Query: 336 FQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKP 395
Q+F M+ K PD Y ++I+ K + V +A+ + M + +T + +TY +LI+
Sbjct: 302 RQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQG 361
Query: 396 LCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEV------FELLDKMRELGC 449
+ K + A+EVF+ M+ R + P IRT++ L +V FE + K G
Sbjct: 362 FGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGV 421
Query: 450 YPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHD 509
P I TY +L+ C KL++ ++ MR+ + +Y ++I G+ GKVK A +
Sbjct: 422 APNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVN 481
Query: 510 YYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDLEHNQLED 553
+ + KG P T + + L R+G + + L ED
Sbjct: 482 LFCSLPSKGVKPNVVTYTTMISGLF-REGLKHEAHVLFRKMKED 524
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 148/327 (45%), Gaps = 15/327 (4%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G V Y S+++ L ++ A +L+ M P ++T L+ K D
Sbjct: 207 GIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDA 266
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFC--NKNVFPLEIKSFNI 285
N R I + L++ C V +A + + K FP ++ ++
Sbjct: 267 EELYNEMI---RMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP-DVVAYTS 322
Query: 286 ILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNK 345
++NG+C +A ++++EMS++G+ + ++Y +++ + + K ++F M ++
Sbjct: 323 LINGFCK-CKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR 381
Query: 346 KITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEK---NNVTPDVVTYNSLIKPLCKNRKI 402
+ P+ + YN ++H L VK+A+ + + M+K + V P++ TYN L+ LC N K+
Sbjct: 382 GVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKL 441
Query: 403 DEAKEVFNDMMKRNI----TPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIM 458
++A VF DM KR + + +V+ V L + G P + TY
Sbjct: 442 EKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAV-NLFCSLPSKGVKPNVVTYTT 500
Query: 459 LIRKFCRWRKLDEVFKIWNMMREDGVS 485
+I R E ++ M+EDGVS
Sbjct: 501 MISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 98/223 (43%), Gaps = 9/223 (4%)
Query: 329 SSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVT 388
S + + LF M + P + +++ +AK + +NL ++ V+ D+ T
Sbjct: 50 SLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYT 109
Query: 389 YNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAF---FRILRVEEEVFELLDKMR 445
N L+ C++ + A MMK P I TF + F + EE ++++M
Sbjct: 110 CNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV 169
Query: 446 ELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVK 505
E+G P + Y +I C+ ++ +++ M G+ D Y L++GL +G+ +
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 506 EAHDYYIEMQRKGFLPEPKT-EQMLQAWLSGRQGTEGQVTDLE 547
+A M ++ P+ T ++ A++ EG+ D E
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVK-----EGKFLDAE 267
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 190/420 (45%), Gaps = 47/420 (11%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
S+ E+ ++S + KM KFD +L E M+ G + T I+I +C + A+
Sbjct: 80 SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS---ILINCFCRRSQLPLAL 136
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHL---LFCNKNVFPLEIKSFNIILN 288
+ G++ I LL+ C K + +A L +F + +FN +++
Sbjct: 137 AVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG--YQPNTVTFNTLIH 194
Query: 289 GWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKIT 348
G L A EA + M +G Q D+V+Y +++ K F L ++M+ K+
Sbjct: 195 GLF-LHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE 253
Query: 349 PDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLC----------- 397
P +YN +I L K + + +A+NL + ME + P+VVTY+SLI LC
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 398 ------------------------KNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRV 433
K K+ EA++++++M+KR+I P+I T+ + +
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 434 EE---EVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSS 490
+ E ++ + M C+P + TY LI+ FC++++++E +++ M + G+ + +
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433
Query: 491 YIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDLEHNQ 550
Y +LI GLF G A + + EM G P T L L E + E+ Q
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 192/399 (48%), Gaps = 21/399 (5%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
GY + ++++I L K A LI+ M G P LVT +++ C D
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYG---VVVNGLCKRGDT 237
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNI 285
A N ++ + G+ + ++ LC+YK++ DA +L K + P + +++
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP-NVVTYSS 296
Query: 286 ILNGWCNLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMK 343
+++ CN R +A R+ +M +R I DV ++++++ + K KL + +L+D+M
Sbjct: 297 LISCLCNY---GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 344 NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKID 403
+ I P Y+++I+ + EA + + M + PDVVTYN+LIK CK ++++
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413
Query: 404 EAKEVFNDMMKRNITPTIRTFHAFFRIL------RVEEEVFELLDKMRELGCYPTIETYI 457
E EVF +M +R + T++ + L + +E+F+ +M G P I TY
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK---EMVSDGVPPNIMTYN 470
Query: 458 MLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRK 517
L+ C+ KL++ ++ ++ + +Y ++I G+ GKV++ D + + K
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 530
Query: 518 GFLPEPKTEQMLQAWLSGRQGTEGQVTDLEHNQLEDDTV 556
G P+ + + R+G++ + L ED T+
Sbjct: 531 GVKPDVVAYNTMISGFC-RKGSKEEADALFKEMKEDGTL 568
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 195/418 (46%), Gaps = 47/418 (11%)
Query: 164 GKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCA 223
G QP + Y +++ L K D A+NL+ M G P ++ T+ I C
Sbjct: 216 GCQP----DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI---IDGLCK 268
Query: 224 VRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIK 281
+ + A+N F + G + + + L+S LC Y DA LL + + P ++
Sbjct: 269 YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP-DVF 327
Query: 282 SFNIILNGWCN---LIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQL 338
+F+ +++ + L+ EAE+++ EM KR I +V+Y+S+++ + +L + Q+
Sbjct: 328 TFSALIDAFVKEGKLV----EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 339 FDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCK 398
F+ M +K PD YN +I K + V+E + + + M + + + VTYN LI+ L +
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 399 NRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL----RVEEE--VFELLDKMRELGCYPT 452
D A+E+F +M+ + P I T++ L ++E+ VFE L + + PT
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM---EPT 500
Query: 453 IETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYI 512
I TY ++I C+ K+++ + ++ + GV D +Y +I G G +EA +
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 560
Query: 513 EMQRKGFLP------------------EPKTE---QMLQAWLSGRQGTEGQVTDLEHN 549
EM+ G LP E E +M +G T G VT++ H+
Sbjct: 561 EMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD 618
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 161/398 (40%), Gaps = 80/398 (20%)
Query: 150 RNDWEAAFTFF--LWAGK-QPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGP 206
R D + AF + GK +PG V Y+++I L K + D A NL + M G P
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPG----VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 289
Query: 207 SLVTPQTLLIMIRKYCAVRDVGRAINTFYAFK----RFGFQVGIDEF------------- 249
++VT +L+ + Y D R ++ K F F ID F
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 349
Query: 250 ---------------QGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWC- 291
L++ C + + +A+ + +K+ FP ++ ++N ++ G+C
Sbjct: 350 DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP-DVVTYNTLIKGFCK 408
Query: 292 --------------------------NLIVSA-------REAERVWHEMSKRGIQHDVVS 318
N+++ A+ ++ EM G+ ++++
Sbjct: 409 YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468
Query: 319 YASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTME 378
Y +++ K+ KL K +F+ ++ K+ P YN +I + K V++ +L +
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528
Query: 379 KNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRI-LR--VEE 435
V PDVV YN++I C+ +EA +F +M + P ++ R LR E
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 588
Query: 436 EVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVF 473
EL+ +MR G + + I L+ +LD+ F
Sbjct: 589 ASAELIKEMRSCG-FAGDASTIGLVTNMLHDGRLDKSF 625
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 128/282 (45%), Gaps = 10/282 (3%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
+A ++ EM K ++ ++ ++S +K +K V L +QM+N I + Y+ +I
Sbjct: 64 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILI 123
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
+ + + A+ +L M K P++VT +SL+ C +++I EA + + M
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 183
Query: 419 PTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKI 475
P TF+ L + E L+D+M GC P + TY +++ C+ D F +
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 476 WNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSG 535
N M + + Y +I GL + +A + + EM+ KG P T L + L
Sbjct: 244 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC- 302
Query: 536 RQGTEGQVTDLEHNQLEDDTVEKKVKATPSKFDKE-KAFLRE 576
G+ +D ++L D +E+K+ F AF++E
Sbjct: 303 ---NYGRWSD--ASRLLSDMIERKINPDVFTFSALIDAFVKE 339
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 187/403 (46%), Gaps = 14/403 (3%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
S+ E++ ++S + KM+KFD +L E M+ G +L T I+I +C + A+
Sbjct: 84 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN---ILINCFCRRSQISLAL 140
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNG 289
+ G++ I LL+ C K + DA L+ P I +F +++G
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI-TFTTLIHG 199
Query: 290 WCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITP 349
L A EA + M +RG Q ++V+Y +++ K + F L ++M+ KI
Sbjct: 200 L-FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 258
Query: 350 DRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVF 409
+ +Y+ VI +L K R +A+NL ME V P+V+TY+SLI LC + +A +
Sbjct: 259 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLL 318
Query: 410 NDMMKRNITPTIRTFHAFFRILRVEEEVFE---LLDKMRELGCYPTIETYIMLIRKFCRW 466
+DM++R I P + TF+A E ++ E L D+M + P I TY LI FC
Sbjct: 319 SDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 378
Query: 467 RKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT- 525
+LDE ++ +M + +Y LI+G ++ E + + EM ++G + T
Sbjct: 379 DRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTY 438
Query: 526 EQMLQAWLSGRQGTEGQVTDLEHNQLEDDTVEKKVKATPSKFD 568
++ + R Q+ Q+ D V + + D
Sbjct: 439 TTLIHGFFQARDCDNAQMV---FKQMVSDGVHPNIMTYNTLLD 478
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 177/361 (49%), Gaps = 12/361 (3%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
GY + ++I L K A L++ M G P+LVT +++ C D+
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG---VVVNGLCKRGDI 241
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNI 285
A N + + + + ++ +LC+Y++ DA +L NK V P + +++
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP-NVITYSS 300
Query: 286 ILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNK 345
+++ CN +A R+ +M +R I +VV++ +++ + K KL + +L+D+M +
Sbjct: 301 LISCLCNY-ERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359
Query: 346 KITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEA 405
I PD Y+++I+ + EA ++ + M + P+VVTYN+LI CK ++IDE
Sbjct: 360 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEG 419
Query: 406 KEVFNDMMKRNITPTIRTF----HAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIR 461
E+F +M +R + T+ H FF+ R + + +M G +P I TY L+
Sbjct: 420 VELFREMSQRGLVGNTVTYTTLIHGFFQA-RDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478
Query: 462 KFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
C+ KL++ ++ ++ + +Y ++I G+ GKV++ D + + KG P
Sbjct: 479 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 538
Query: 522 E 522
+
Sbjct: 539 D 539
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 184/403 (45%), Gaps = 47/403 (11%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G +H++ Y+ +I+ + + A L+ M G PS+VT +LL YC + +
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL---NGYCHGKRI 171
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNI 285
A+ G++ F L+ L + +A L+ + P + ++ +
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP-NLVTYGV 230
Query: 286 ILNGWC----------------------NLIVSAR------------EAERVWHEMSKRG 311
++NG C N+++ + +A ++ EM +G
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 312 IQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAK-GRLVKEA 370
++ +V++Y+S++SC + +L M +KI P+ +NA+I A K G+LV EA
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLV-EA 349
Query: 371 VNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTF----HA 426
L M K ++ PD+ TY+SLI C + ++DEAK +F M+ ++ P + T+ +
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING 409
Query: 427 FFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSH 486
F + R++E V EL +M + G TY LI F + R D ++ M DGV
Sbjct: 410 FCKAKRIDEGV-ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 468
Query: 487 DRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
+ +Y L+ GL NGK+++A + +QR P T ++
Sbjct: 469 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 176/371 (47%), Gaps = 22/371 (5%)
Query: 166 QPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVR 225
Q G ++ Y +++ L K D A+NL+ M ++V T+ I C R
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTV---IDSLCKYR 274
Query: 226 DVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSF 283
A+N F + G + + + L+S LC Y+ DA LL + + P + +F
Sbjct: 275 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINP-NVVTF 333
Query: 284 NIILNGWCN---LIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFD 340
N +++ + L+ EAE+++ EM KR I D+ +Y+S+++ + +L + +F+
Sbjct: 334 NALIDAFVKEGKLV----EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 389
Query: 341 QMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNR 400
M +K P+ YN +I+ K + + E V L + M + + + VTY +LI + R
Sbjct: 390 LMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQAR 449
Query: 401 KIDEAKEVFNDMMKRNITPTIRTFHAFFRIL----RVEEE--VFELLDKMRELGCYPTIE 454
D A+ VF M+ + P I T++ L ++E+ VFE L + + PTI
Sbjct: 450 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM---EPTIY 506
Query: 455 TYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEM 514
TY ++I C+ K+++ + ++ + GV D Y +I G G +EA + +M
Sbjct: 507 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Query: 515 QRKGFLPEPKT 525
+ G LP+ T
Sbjct: 567 REDGPLPDSGT 577
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 112/288 (38%), Gaps = 47/288 (16%)
Query: 329 SSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVT 388
S KL LF M + P +N ++ A+AK + ++L + M++ ++ ++ T
Sbjct: 63 SMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYT 122
Query: 389 YNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTF------------------------ 424
YN LI C+ +I A + MMK P+I T
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 425 ---------------HAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKL 469
H F + E V L+D+M + GC P + TY +++ C+ +
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAV-ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 470 DEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
D F + N M + + Y +I L +A + + EM+ KG P T L
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 530 QAWLSGRQGTEGQVTDLEHNQLEDDTVEKKVKATPSKFDKE-KAFLRE 576
+ L + + ++L D +E+K+ F+ AF++E
Sbjct: 302 ISCLCNYERWS------DASRLLSDMIERKINPNVVTFNALIDAFVKE 343
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 178/380 (46%), Gaps = 13/380 (3%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
S+ E++ ++S + KM KF+ +L E M+ G L T I I +C + A+
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS---IFINCFCRRSQLSLAL 138
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNV---FPLEIKSFNIILN 288
+ G++ I LL+ C K + DA L+ ++ V + + +F +++
Sbjct: 139 AVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV--DQMVEMGYKPDTFTFTTLIH 196
Query: 289 GWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKIT 348
G L A EA + +M +RG Q D+V+Y ++++ K + L +M+ KI
Sbjct: 197 GL-FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 255
Query: 349 PDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEV 408
D +YN +I L K + + +A+NL M+ + PDV TY+SLI LC + +A +
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 409 FNDMMKRNITPTIRTFHAFFRILRVEEEVFE---LLDKMRELGCYPTIETYIMLIRKFCR 465
+DM++R I P + TF A E ++ E L D+M + P I TY LI FC
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Query: 466 WRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT 525
+LDE ++ +M + +Y LI G +V+E + + EM ++G + T
Sbjct: 376 HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 435
Query: 526 -EQMLQAWLSGRQGTEGQVT 544
++ + R Q+
Sbjct: 436 YTTLIHGFFQARDCDNAQMV 455
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 193/392 (49%), Gaps = 13/392 (3%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
GY + ++I L K A L++ M G P LVT T+ + C D+
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV---VNGLCKRGDI 239
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNI 285
A++ ++ + + + ++ LC+YK++ DA +L NK + P ++ +++
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP-DVFTYSS 298
Query: 286 ILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNK 345
+++ CN +A R+ +M +R I +VV++++++ + K KL + +L+D+M +
Sbjct: 299 LISCLCNY-GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357
Query: 346 KITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEA 405
I PD Y+++I+ + EA ++ + M + P+VVTY++LIK CK ++++E
Sbjct: 358 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEG 417
Query: 406 KEVFNDMMKRNITPTIRTF----HAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIR 461
E+F +M +R + T+ H FF+ R + + +M +G +P I TY +L+
Sbjct: 418 MELFREMSQRGLVGNTVTYTTLIHGFFQA-RDCDNAQMVFKQMVSVGVHPNILTYNILLD 476
Query: 462 KFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
C+ KL + ++ ++ + D +Y ++I G+ GKV++ + + + KG P
Sbjct: 477 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSP 536
Query: 522 EPKTEQMLQAWLSGRQGTEGQVTDLEHNQLED 553
+ + R+G++ + L ED
Sbjct: 537 NVIAYNTMISGFC-RKGSKEEADSLLKKMKED 567
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 184/428 (42%), Gaps = 67/428 (15%)
Query: 166 QPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVR 225
Q G + Y ++++ L K D A +L++ M G +V T+ I C +
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTI---IDGLCKYK 272
Query: 226 DVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSF 283
+ A+N F G + + + L+S LC Y DA LL + + P + +F
Sbjct: 273 HMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP-NVVTF 331
Query: 284 NIILNGWCN---LIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFD 340
+ +++ + L+ EAE+++ EM KR I D+ +Y+S+++ + +L + +F+
Sbjct: 332 SALIDAFVKEGKLV----EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 387
Query: 341 QMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEK-----NNVT------------ 383
M +K P+ Y+ +I K + V+E + L + M + N VT
Sbjct: 388 LMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 447
Query: 384 ------------------PDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFH 425
P+++TYN L+ LCKN K+ +A VF + + + P I T++
Sbjct: 448 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 507
Query: 426 AFFRIL----RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMRE 481
+ +VE+ +EL + G P + Y +I FCR +E + M+E
Sbjct: 508 IMIEGMCKAGKVEDG-WELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKE 566
Query: 482 DGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEG 541
DG + +Y LI +G + + + EM+ GF +G T G
Sbjct: 567 DGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGF--------------AGDASTIG 612
Query: 542 QVTDLEHN 549
VT++ H+
Sbjct: 613 LVTNMLHD 620
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 131/288 (45%), Gaps = 12/288 (4%)
Query: 294 IVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKV 353
I+ +A ++ +M K +V + ++S +K +K V L +QM+ I+ D
Sbjct: 61 IIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120
Query: 354 YNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMM 413
Y+ I+ + + A+ +L M K PD+VT +SL+ C +++I +A + + M+
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 414 KRNITPTIRTF----HAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKL 469
+ P TF H F + E V L+D+M + GC P + TY ++ C+ +
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAV-ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 470 DEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
D + M + + D Y +I GL + +A + + EM KG P+ T L
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
Query: 530 QAWLSGRQGTEGQVTDLEHNQLEDDTVEKKVKATPSKFDKE-KAFLRE 576
+ L G+ +D ++L D +E+K+ F AF++E
Sbjct: 300 ISCLC----NYGRWSD--ASRLLSDMIERKINPNVVTFSALIDAFVKE 341
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 148/370 (40%), Gaps = 75/370 (20%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAIN--- 232
Y+++I L K + D A NL M G P + T +L+ + Y D R ++
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 233 ---------TFYA----FKRFGFQV------------GID----EFQGLLSALCRYKNVQ 263
TF A F + G V ID + L++ C + +
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 264 DAEHL--LFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYAS 321
+A+H+ L +K+ FP + +++ ++ G+C E ++ EMS+RG+ + V+Y +
Sbjct: 381 EAKHMFELMISKDCFP-NVVTYSTLIKGFCK-AKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 322 IMSCY-----------------------------------SKSSKLYKVFQLFDQMKNKK 346
++ + K+ KL K +F+ ++
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 347 ITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAK 406
+ PD YN +I + K V++ L + V+P+V+ YN++I C+ +EA
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558
Query: 407 EVFNDMMKRNITPTIRTFHAFFRI-LR--VEEEVFELLDKMRELGCYPTIETYIMLIRKF 463
+ M + P T++ R LR E EL+ +MR G + + I L+
Sbjct: 559 SLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCG-FAGDASTIGLVTNM 617
Query: 464 CRWRKLDEVF 473
+LD+ F
Sbjct: 618 LHDGRLDKSF 627
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 198/400 (49%), Gaps = 25/400 (6%)
Query: 169 YAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVG 228
Y + ++++I L K A LI+ M G P L T T+ + C D+
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTV---VNGLCKRGDID 237
Query: 229 RAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNII 286
A++ ++ + + + ++ ALC YKNV DA +L NK + P + ++N +
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP-NVVTYNSL 296
Query: 287 LNGWCNLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKN 344
+ CN R +A R+ +M +R I +VV++++++ + K KL + +L+D+M
Sbjct: 297 IRCLCNY---GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 345 KKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDE 404
+ I PD Y+++I+ + EA ++ + M + P+VVTYN+LIK CK ++++E
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 405 AKEVFNDMMKRNITPTIRTFHAFFRIL------RVEEEVFELLDKMRELGCYPTIETYIM 458
E+F +M +R + T++ + L + +++F+ KM G P I TY +
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK---KMVSDGVPPDIITYSI 470
Query: 459 LIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKG 518
L+ C++ KL++ ++ +++ + D +Y ++I G+ GKV++ D + + KG
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 519 FLPEPKTEQMLQAWLSG--RQGTEGQVTDLEHNQLEDDTV 556
P + +SG R+G + + L ED T+
Sbjct: 531 VKPNV---IIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 172/365 (47%), Gaps = 14/365 (3%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
S+ E++ ++S + KM KFD +L E M+ L + I+I +C + A+
Sbjct: 79 SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN---ILINCFCRRSQLPLAL 135
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIK----SFNIIL 287
+ G++ I LL+ C K + +A L+ +F +E + +FN ++
Sbjct: 136 AVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV---DQMFVMEYQPNTVTFNTLI 192
Query: 288 NGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKI 347
+G L A EA + M RG Q D+ +Y ++++ K + L +M+ KI
Sbjct: 193 HGL-FLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 251
Query: 348 TPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKE 407
D +Y +I AL + V +A+NL M+ + P+VVTYNSLI+ LC + +A
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 311
Query: 408 VFNDMMKRNITPTIRTFHAFFRILRVEEEVFE---LLDKMRELGCYPTIETYIMLIRKFC 464
+ +DM++R I P + TF A E ++ E L D+M + P I TY LI FC
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 465 RWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPK 524
+LDE ++ +M + +Y LI G +V+E + + EM ++G +
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 525 TEQML 529
T L
Sbjct: 432 TYNTL 436
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 179/409 (43%), Gaps = 55/409 (13%)
Query: 164 GKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCA 223
G QP + Y ++++ L K D A +L++ M G +V T+ I C
Sbjct: 215 GCQP----DLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTI---IDALCN 267
Query: 224 VRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIK 281
++V A+N F G + + + L+ LC Y DA LL + + P +
Sbjct: 268 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP-NVV 326
Query: 282 SFNIILNGWCN---LIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQL 338
+F+ +++ + L+ EAE+++ EM KR I D+ +Y+S+++ + +L + +
Sbjct: 327 TFSALIDAFVKEGKLV----EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 339 FDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCK 398
F+ M +K P+ YN +I K + V+E + L + M + + + VTYN+LI+ L +
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 399 NRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL----RVEEE--VFELLDKMR------- 445
D A+++F M+ + P I T+ L ++E+ VFE L K +
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 446 ------------------ELGCY-------PTIETYIMLIRKFCRWRKLDEVFKIWNMMR 480
+L C P + Y +I FCR +E ++ M+
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 481 EDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
EDG + +Y LI +G + + EM+ GF+ + T M+
Sbjct: 563 EDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 611
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 125/283 (44%), Gaps = 12/283 (4%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
+A ++ EM + +V + ++S +K +K V L ++M+N +I+ D YN +I
Sbjct: 63 DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILI 122
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
+ + + A+ +L M K PD+VT +SL+ C ++I EA + + M
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ 182
Query: 419 PTIRTF----HAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFK 474
P TF H F + E V L+D+M GC P + TY ++ C+ +D
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAV-ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 475 IWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLS 534
+ M + + D Y +I L V +A + + EM KG P T L L
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 535 GRQGTEGQVTDLEHNQLEDDTVEKKVKATPSKFDKE-KAFLRE 576
G+ +D ++L D +E+K+ F AF++E
Sbjct: 302 NY----GRWSD--ASRLLSDMIERKINPNVVTFSALIDAFVKE 338
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 147/356 (41%), Gaps = 72/356 (20%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAIN--- 232
Y ++I L + + A NL M G P++VT +L+ + Y D R ++
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 233 ---------TFYA----FKRFGFQV------------GID----EFQGLLSALCRYKNVQ 263
TF A F + G V ID + L++ C + +
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 264 DAEHL--LFCNKNVFPLEIKSFNIILNGWC---------------------------NLI 294
+A+H+ L +K+ FP + ++N ++ G+C N +
Sbjct: 378 EAKHMFELMISKDCFP-NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 295 V-------SAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKI 347
+ A++++ +M G+ D+++Y+ ++ K KL K +F+ ++ K+
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 348 TPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKE 407
PD YN +I + K V++ +L ++ V P+V+ Y ++I C+ +EA
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556
Query: 408 VFNDMMKRNITPTIRTFHAFFRI-LRVEEEV--FELLDKMRELGCYPTIETYIMLI 460
+F +M + P T++ R LR ++ EL+ +MR G T M+I
Sbjct: 557 LFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 612
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 104/264 (39%), Gaps = 46/264 (17%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y S+I+ + D A ++ E+M P++VT TL I+ +C + V + F
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL---IKGFCKAKRVEEGMELFR 419
Query: 236 AFKRFG---------------FQVG--------------------IDEFQGLLSALCRYK 260
+ G FQ G I + LL LC+Y
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479
Query: 261 NVQDAEHLL-FCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWH---EMSKRGIQHDV 316
++ A + + K+ +I ++NI++ G C A + E W +S +G++ +V
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK----AGKVEDGWDLFCSLSLKGVKPNV 535
Query: 317 VSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQT 376
+ Y +++S + + + LF +MK P+ YN +I A + + L++
Sbjct: 536 IIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKE 595
Query: 377 MEKNNVTPDVVTYNSLIKPLCKNR 400
M D T + +I L R
Sbjct: 596 MRSCGFVGDASTISMVINMLHDGR 619
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 190/419 (45%), Gaps = 45/419 (10%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
S+ E++ ++S + KM+KFD +L E M+ L T I+I +C + A+
Sbjct: 84 SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN---ILINCFCRRSQISLAL 140
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNG 289
+ G++ I LL+ C K + DA L+ P I +F +++G
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI-TFTTLIHG 199
Query: 290 WCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITP 349
L A EA + M +RG Q ++V+Y +++ K L ++M+ KI
Sbjct: 200 L-FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA 258
Query: 350 DRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVF 409
D ++N +I +L K R V +A+NL + ME + P+VVTY+SLI LC + +A ++
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 410 NDMMKRNITPTIRTFHAFFRIL-------------------RVEEEVF------------ 438
+DM+++ I P + TF+A ++ ++F
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 439 ELLDKMREL-------GCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSY 491
+ LDK +++ C+P + TY LI+ FC+ +++++ +++ M G+ D +Y
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Query: 492 IVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDLEHNQ 550
LI GLF +G A + +M G P+ T +L L E + ++ Q
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 497
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 169/371 (45%), Gaps = 14/371 (3%)
Query: 166 QPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVR 225
Q G ++ Y +++ L K D A NL+ M +V T+ I C R
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI---IDSLCKYR 274
Query: 226 DVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSF 283
V A+N F + G + + + L+S LC Y DA LL K + P + +F
Sbjct: 275 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP-NLVTF 333
Query: 284 NIILNGWCNLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQ 341
N +++ + + + EAE+++ +M KR I D+ +Y S+++ + +L K Q+F+
Sbjct: 334 NALIDAF---VKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 390
Query: 342 MKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRK 401
M +K PD YN +I K + V++ L + M + D VTY +LI+ L +
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 450
Query: 402 IDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIM 458
D A++VF M+ + P I T+ L E+ E+ D M++ I Y
Sbjct: 451 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 510
Query: 459 LIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKG 518
+I C+ K+D+ + ++ + GV + +Y +I GL ++EA+ +M+ G
Sbjct: 511 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Query: 519 FLPEPKTEQML 529
LP T L
Sbjct: 571 PLPNSGTYNTL 581
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 159/353 (45%), Gaps = 43/353 (12%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
GY + ++I L K A L++ M G P+LVT +++ C D
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG---VVVNGLCKRGDT 241
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIIL 287
A+N + + + F ++ +LC+Y++V DA +L
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL------------------- 282
Query: 288 NGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKI 347
+ EM +GI+ +VV+Y+S++SC + QL M KKI
Sbjct: 283 ----------------FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Query: 348 TPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKE 407
P+ +NA+I A K EA L M K ++ PD+ TYNSL+ C + ++D+AK+
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386
Query: 408 VFNDMMKRNITPTIRTFH----AFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKF 463
+F M+ ++ P + T++ F + RVE+ EL +M G TY LI+
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT-ELFREMSHRGLVGDTVTYTTLIQGL 445
Query: 464 CRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQR 516
D K++ M DGV D +Y +L+ GL NGK+++A + + MQ+
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 127/322 (39%), Gaps = 69/322 (21%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
++++I L K R D A NL + M G P++VT +L+ + Y D + ++
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 236 AFK----RFGFQVGIDEF----------------------------QGLLSALCRYKNVQ 263
K F ID F L++ C + +
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 264 DAEHLL--FCNKNVFPLEIKSFNIILNGWC----------------------------NL 293
A+ + +K+ FP ++ ++N ++ G+C L
Sbjct: 383 KAKQMFEFMVSKDCFP-DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 294 IVS------AREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKI 347
I A++V+ +M G+ D+++Y+ ++ + KL K ++FD M+ +I
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 348 TPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKE 407
D +Y +I + K V + +L ++ V P+VVTYN++I LC R + EA
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561
Query: 408 VFNDMMKRNITPTIRTFHAFFR 429
+ M + P T++ R
Sbjct: 562 LLKKMKEDGPLPNSGTYNTLIR 583
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 110/239 (46%), Gaps = 7/239 (2%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y+S+++ + D A + E M P +VT TL I+ +C + V F
Sbjct: 368 YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTL---IKGFCKSKRVEDGTELFR 424
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCNL 293
G + L+ L + +A+ + + V P +I +++I+L+G CN
Sbjct: 425 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV-PPDIMTYSILLDGLCN- 482
Query: 294 IVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKV 353
+A V+ M K I+ D+ Y +++ K+ K+ + LF + K + P+
Sbjct: 483 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 542
Query: 354 YNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDM 412
YN +I L RL++EA LL+ M+++ P+ TYN+LI+ ++ + E+ +M
Sbjct: 543 YNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 5/197 (2%)
Query: 367 VKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHA 426
+ +A+ L M K+ P +V +N L+ + K +K D + M + I + T++
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 427 FFRILRVEEEV---FELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDG 483
++ LL KM +LG P+I T L+ +C +++ + + + M E G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 484 VSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQV 543
D ++ LIHGLFL+ K EA M ++G P T ++ L R T+ +
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 544 TDLEHNQLEDDTVEKKV 560
L N++E +E V
Sbjct: 246 NLL--NKMEAAKIEADV 260
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 111/286 (38%), Gaps = 47/286 (16%)
Query: 331 KLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYN 390
KL LF M + P +N ++ A+AK + ++L + M++ + + TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 391 SLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTF-------------------------- 424
LI C+ +I A + MMK P+I T
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 425 -------------HAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDE 471
H F + E V L+D+M + GC P + TY +++ C+ D
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAV-ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243
Query: 472 VFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQA 531
+ N M + D + +I L V +A + + EM+ KG P T L +
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 532 WLSGRQGTEGQVTDLEHNQLEDDTVEKKVKATPSKFDKE-KAFLRE 576
L + G+ +D +QL D +EKK+ F+ AF++E
Sbjct: 304 CLC----SYGRWSD--ASQLLSDMIEKKINPNLVTFNALIDAFVKE 343
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 195/397 (49%), Gaps = 25/397 (6%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G H + Y+ +I+ L + +F A +++ M G P +VT +L I +C V
Sbjct: 99 GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSL---INGFCQGNRV 155
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL-FCNKNVFPLEIKSFNII 286
AI+ + GF+ + + ++ C+ V DA L ++ + ++N +
Sbjct: 156 FDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSL 215
Query: 287 LNGWCNLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKN 344
+ G C S R +A R+ +M R I +V+++ +++ + K K + +L+++M
Sbjct: 216 VAGLC---CSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTR 272
Query: 345 KKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDE 404
+ + PD YN++I+ L V EA +L M PDVVTYN+LI CK++++DE
Sbjct: 273 RCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDE 332
Query: 405 AKEVFNDMMKRNITPTIRTFH----AFFRILR--VEEEVFELLDKMRELGCYPTIETYIM 458
++F +M +R + T++ +F+ R +E+F +D P I TY +
Sbjct: 333 GTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS------RPNIRTYSI 386
Query: 459 LIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKG 518
L+ C ++++ ++ M++ + D ++Y ++IHG+ G V++A D + + KG
Sbjct: 387 LLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKG 446
Query: 519 FLPEPKT-EQMLQAWLSGRQGTEGQVTDLEHNQLEDD 554
P+ + M+ + RQ + +DL + ++++D
Sbjct: 447 LKPDVVSYTTMISGFCRKRQWDK---SDLLYRKMQED 480
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 151/300 (50%), Gaps = 13/300 (4%)
Query: 246 IDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPL--EIKSFNIILNGWCNLIVSAR--EAE 301
I +F +LS + + KN D LF + V + ++ S+NI++N C +R A
Sbjct: 69 IVDFSKVLSKIAKSKN-YDLVISLFHHMEVCGIGHDLYSYNIVINCLCR---CSRFVIAL 124
Query: 302 RVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHAL 361
V +M K G + DVV+ +S+++ + + ++++ L +M+ PD +YN +I
Sbjct: 125 SVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGS 184
Query: 362 AKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTI 421
K LV +AV L ME++ V D VTYNSL+ LC + + +A + DM+ R+I P +
Sbjct: 185 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNV 244
Query: 422 RTFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNM 478
TF A + E E +L ++M P + TY LI C ++DE ++ ++
Sbjct: 245 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 304
Query: 479 MREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT-EQMLQAWL-SGR 536
M G D +Y LI+G + +V E + EM ++G + + T ++Q + +GR
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 100/207 (48%), Gaps = 40/207 (19%)
Query: 249 FQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCNLIVSAR--EAERVW 304
+ L++ LC + V +A+ +L K P ++ ++N ++NG+C S R E +++
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLP-DVVTYNTLINGFCK---SKRVDEGTKLF 337
Query: 305 HEMSKRGIQHDVVSYASIMSCYSKSSK-----------------------LY-------- 333
EM++RG+ D ++Y +I+ Y ++ + LY
Sbjct: 338 REMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRV 397
Query: 334 -KVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSL 392
K LF+ M+ +I D YN VIH + K V++A +L +++ + PDVV+Y ++
Sbjct: 398 EKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTM 457
Query: 393 IKPLCKNRKIDEAKEVFNDMMKRNITP 419
I C+ R+ D++ ++ M + + P
Sbjct: 458 ISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 3/200 (1%)
Query: 329 SSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVT 388
S L + LF +M + P ++ V+ +AK + ++L ME + D+ +
Sbjct: 47 SMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYS 106
Query: 389 YNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLD---KMR 445
YN +I LC+ + A V MMK P + T + VF+ +D KM
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166
Query: 446 ELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVK 505
E+G P + Y +I C+ +++ ++++ M DGV D +Y L+ GL +G+
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 226
Query: 506 EAHDYYIEMQRKGFLPEPKT 525
+A +M + +P T
Sbjct: 227 DAARLMRDMVMRDIVPNVIT 246
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 171/364 (46%), Gaps = 12/364 (3%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
S+ E+ ++S + KM+KFD + E M G +L T IMI C + A+
Sbjct: 64 SIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN---IMINCLCRRSQLSFAL 120
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNV---FPLEIKSFNIILN 288
+ G+ I LL+ C + +A L+ ++ V + + +F +++
Sbjct: 121 AILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV--DQMVEMGYQPDTVTFTTLVH 178
Query: 289 GWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKIT 348
G A EA + M +G Q D+V+Y ++++ K + L ++M+ KI
Sbjct: 179 GLFQH-NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE 237
Query: 349 PDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEV 408
D +Y+ VI +L K R V +A+NL M+ + PDV TY+SLI LC + +A +
Sbjct: 238 ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 297
Query: 409 FNDMMKRNITPTIRTFHAFFRILRVEEEVFE---LLDKMRELGCYPTIETYIMLIRKFCR 465
+DM++R I P + TF++ E ++ E L D+M + P I TY LI FC
Sbjct: 298 LSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCM 357
Query: 466 WRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT 525
+LDE +I+ +M D +Y LI+G KV + + + +M R+G + T
Sbjct: 358 HDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVT 417
Query: 526 EQML 529
L
Sbjct: 418 YTTL 421
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 181/365 (49%), Gaps = 20/365 (5%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
GY + +++ L + K A L+E M G P LVT + I C +
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV---INGLCKRGEP 221
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNI 285
A+N ++ + + + ++ +LC+Y++V DA +L NK + P ++ +++
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP-DVFTYSS 280
Query: 286 ILNGWCNLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMK 343
+++ CN R +A R+ +M +R I +VV++ S++ ++K KL + +LFD+M
Sbjct: 281 LISCLCNY---GRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 337
Query: 344 NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKID 403
+ I P+ YN++I+ + EA + M + PDVVTYN+LI CK +K+
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVV 397
Query: 404 EAKEVFNDMMKRNITPTIRTF----HAFFRILRVE--EEVFELLDKMRELGCYPTIETYI 457
+ E+F DM +R + T+ H FF+ + + VF+ +M G +P I TY
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFK---QMVSDGVHPNIMTYN 454
Query: 458 MLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRK 517
L+ C+ KL++ ++ +++ + D +Y ++ G+ GKV++ D + + K
Sbjct: 455 TLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLK 514
Query: 518 GFLPE 522
G P+
Sbjct: 515 GVKPD 519
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 177/388 (45%), Gaps = 10/388 (2%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G +H++ Y+ MI+ L + + A ++ M G GPS+VT +LL +C +
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLL---NGFCHGNRI 151
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNI 285
A+ G+Q F L+ L ++ +A L+ K P ++ ++
Sbjct: 152 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQP-DLVTYGA 210
Query: 286 ILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNK 345
++NG C A + ++M K I+ DVV Y++++ K + LF +M NK
Sbjct: 211 VINGLCKR-GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK 269
Query: 346 KITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEA 405
I PD Y+++I L +A LL M + + P+VVT+NSLI K K+ EA
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329
Query: 406 KEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIMLIRK 462
+++F++M++R+I P I T+++ + +E ++ M C P + TY LI
Sbjct: 330 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLING 389
Query: 463 FCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
FC+ +K+ + +++ M G+ + +Y LIHG F A + +M G P
Sbjct: 390 FCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN 449
Query: 523 PKTEQMLQAWLSGRQGTEGQVTDLEHNQ 550
T L L E + E+ Q
Sbjct: 450 IMTYNTLLDGLCKNGKLEKAMVVFEYLQ 477
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 12/283 (4%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
EA ++ EM K +V ++ ++S +K K V ++M+ ++ + YN +I
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
+ L + + A+ +L M K P +VT NSL+ C +I EA + + M++
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167
Query: 419 PTIRTF----HAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFK 474
P TF H F+ + E V L+++M GC P + TY +I C+ + D
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAV-ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 475 IWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLS 534
+ N M + + D Y +I L V +A + + EM KG P+ T L + L
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 535 GRQGTEGQVTDLEHNQLEDDTVEKKVKATPSKFDKE-KAFLRE 576
G+ +D ++L D +E+K+ F+ AF +E
Sbjct: 287 ----NYGRWSD--ASRLLSDMLERKINPNVVTFNSLIDAFAKE 323
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 130/322 (40%), Gaps = 69/322 (21%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAIN--- 232
Y ++I L K R D A NL M G P + T +L+ + Y D R ++
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 233 ---------TFY----AFKRFG------------FQVGID----EFQGLLSALCRYKNVQ 263
TF AF + G Q ID + L++ C + +
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 264 DAEHL--LFCNKNVFPLEIKSFNIILNGWCNL--IVSARE-------------------- 299
+A+ + L +K+ P ++ ++N ++NG+C +V E
Sbjct: 363 EAQQIFTLMVSKDCLP-DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 300 ------------AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKI 347
A+ V+ +M G+ ++++Y +++ K+ KL K +F+ ++ K+
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 348 TPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKE 407
PD YN + + K V++ +L ++ V PDV+ YN++I CK +EA
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYT 541
Query: 408 VFNDMMKRNITPTIRTFHAFFR 429
+F M + P T++ R
Sbjct: 542 LFIKMKEDGPLPDSGTYNTLIR 563
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 171/356 (48%), Gaps = 10/356 (2%)
Query: 189 FDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDE 248
D A L + M G P++VT TL I YC +R + + G + +
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTL---IDGYCKLRKIDDGFKLLRSMALKGLEPNLIS 277
Query: 249 FQGLLSALCRYKNVQDAEHLLF-CNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEM 307
+ +++ LCR +++ +L N+ + L+ ++N ++ G+C + +A + EM
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKE-GNFHQALVMHAEM 336
Query: 308 SKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLV 367
+ G+ V++Y S++ K+ + + + DQM+ + + P+ + Y ++ ++ +
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 368 KEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFH-- 425
EA +L+ M N +P VVTYN+LI C K+++A V DM ++ ++P + ++
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Query: 426 --AFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDG 483
F R V+E + +M E G P TY LI+ FC R+ E ++ M G
Sbjct: 457 LSGFCRSYDVDE-ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 484 VSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGT 539
+ D +Y LI+ + G +++A + EM KG LP+ T +L L+ + T
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 571
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 184/401 (45%), Gaps = 21/401 (5%)
Query: 168 GYAHSVREYHSMI-SILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRD 226
G+ V Y++++ + + R A N+ + M P++ T I+IR +C +
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYN---ILIRGFCFAGN 220
Query: 227 VGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFN 284
+ A+ F + G + + L+ C+ + + D LL K + P + S+N
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEP-NLISYN 279
Query: 285 IILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKN 344
+++NG C +E V EM++RG D V+Y +++ Y K ++ + +M
Sbjct: 280 VVINGLCRE-GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
Query: 345 KKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDE 404
+TP Y ++IH++ K + A+ L M + P+ TY +L+ + ++E
Sbjct: 339 HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 405 AKEVFNDMMKRNITPTIRTFHAFFR---ILRVEEEVFELLDKMRELGCYPTIETYIMLIR 461
A V +M +P++ T++A + E+ +L+ M+E G P + +Y ++
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Query: 462 KFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
FCR +DE ++ M E G+ D +Y LI G + KEA D Y EM R G P
Sbjct: 459 GFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPP 518
Query: 522 EPKT-EQMLQAWLSGRQGTEGQVTDLEHN-QLEDDTVEKKV 560
+ T ++ A+ EG DLE QL ++ VEK V
Sbjct: 519 DEFTYTALINAYC-----MEG---DLEKALQLHNEMVEKGV 551
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 183/398 (45%), Gaps = 32/398 (8%)
Query: 150 RNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTG---P 206
+ND F WA P ++R + IL K + + TA L E +
Sbjct: 59 QNDQALILKFLNWA--NPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYA 116
Query: 207 SLV-------------TPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLL 253
SLV T ++++ Y + + +A++ + + GF G+ + +L
Sbjct: 117 SLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVL 176
Query: 254 SALCRYK-NVQDAEHLL--FCNKNVFPLEIKSFNIILNGWC---NLIVSAREAERVWHEM 307
A R K N+ AE++ V P + ++NI++ G+C N+ V A ++ +M
Sbjct: 177 DATIRSKRNISFAENVFKEMLESQVSP-NVFTYNILIRGFCFAGNIDV----ALTLFDKM 231
Query: 308 SKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLV 367
+G +VV+Y +++ Y K K+ F+L M K + P+ YN VI+ L + +
Sbjct: 232 ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRM 291
Query: 368 KEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAF 427
KE +L M + + D VTYN+LIK CK +A + +M++ +TP++ T+ +
Sbjct: 292 KEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSL 351
Query: 428 FRILRVE---EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGV 484
+ E LD+MR G P TY L+ F + ++E +++ M ++G
Sbjct: 352 IHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF 411
Query: 485 SHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
S +Y LI+G + GK+++A +M+ KG P+
Sbjct: 412 SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 183/408 (44%), Gaps = 27/408 (6%)
Query: 158 TFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIM 217
+F L + GY+ Y+++I K F A + M G PS++T +L
Sbjct: 295 SFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSL--- 351
Query: 218 IRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF-CNKNVF 276
I C ++ RA+ + G + L+ + + +A +L N N F
Sbjct: 352 IHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF 411
Query: 277 PLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVF 336
+ ++N ++NG C + +A V +M ++G+ DVVSY++++S + +S + +
Sbjct: 412 SPSVVTYNALINGHC-VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 337 QLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPL 396
++ +M K I PD Y+++I + R KEA +L + M + + PD TY +LI
Sbjct: 471 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530
Query: 397 CKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFE---LLDKMRELGCYPTI 453
C +++A ++ N+M+++ + P + T+ L + E LL K+ P+
Sbjct: 531 CMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSD 590
Query: 454 ETY---------------IMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGL 498
TY + LI+ FC + E +++ M D ++Y ++IHG
Sbjct: 591 VTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGH 650
Query: 499 FLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDL 546
G +++A+ Y EM + GFL T L L EG+V +L
Sbjct: 651 CRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALH----KEGKVNEL 694
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 174/403 (43%), Gaps = 34/403 (8%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G SV Y S+I + K + A ++ MR G P+ T TL + + +
Sbjct: 340 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTL---VDGFSQKGYM 396
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNI 285
A GF + + L++ C ++DA +L K + P ++ S++
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP-DVVSYST 455
Query: 286 ILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNK 345
+L+G+C EA RV EM ++GI+ D ++Y+S++ + + + + L+++M
Sbjct: 456 VLSGFCR-SYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV 514
Query: 346 KITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEA 405
+ PD Y A+I+A +++A+ L M + V PDVVTY+ LI L K + EA
Sbjct: 515 GLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 574
Query: 406 KEVFNDMMKRNITPTIRTFHAFFR---------------------ILRVEEEVFE-LLDK 443
K + + P+ T+H ++ ++VFE +L K
Sbjct: 575 KRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGK 634
Query: 444 MRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGK 503
+ P Y ++I CR + + + ++ M + G + I L+ L GK
Sbjct: 635 NHK----PDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGK 690
Query: 504 VKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDL 546
V E + + + R L E + ++L ++ R+G V D+
Sbjct: 691 VNELNSVIVHVLRSCELSEAEQAKVL-VEINHREGNMDVVLDV 732
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 132/314 (42%), Gaps = 36/314 (11%)
Query: 247 DEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIK------------------------- 281
DE+ L+ +K++Q+ L + +VF L +K
Sbjct: 113 DEYASLV-----FKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMP 167
Query: 282 ---SFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQL 338
S+N +L+ + AE V+ EM + + +V +Y ++ + + + L
Sbjct: 168 GVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTL 227
Query: 339 FDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCK 398
FD+M+ K P+ YN +I K R + + LL++M + P++++YN +I LC+
Sbjct: 228 FDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCR 287
Query: 399 NRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMREL---GCYPTIET 455
++ E V +M +R + T++ + E + L E+ G P++ T
Sbjct: 288 EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVIT 347
Query: 456 YIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQ 515
Y LI C+ ++ + + MR G+ + +Y L+ G G + EA+ EM
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407
Query: 516 RKGFLPEPKTEQML 529
GF P T L
Sbjct: 408 DNGFSPSVVTYNAL 421
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 112/262 (42%), Gaps = 22/262 (8%)
Query: 165 KQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAV 224
K+ G + V Y +++S + D A + M G P +T +L I+ +C
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL---IQGFCEQ 498
Query: 225 RDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKS 282
R A + + R G + L++A C +++ A L K V P ++ +
Sbjct: 499 RRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP-DVVT 557
Query: 283 FNIILNGWCNLIVSAREAERVWHEM-SKRGIQHDVVSYASIMSC----YSKSSKLYKVF- 336
+++++NG N REA+R+ ++ + + DV + I +C + L K F
Sbjct: 558 YSVLINGL-NKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFC 616
Query: 337 ---------QLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVV 387
Q+F+ M K PD YN +IH + +++A L + M K+ V
Sbjct: 617 MKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTV 676
Query: 388 TYNSLIKPLCKNRKIDEAKEVF 409
T +L+K L K K++E V
Sbjct: 677 TVIALVKALHKEGKVNELNSVI 698
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 177/354 (50%), Gaps = 14/354 (3%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
S+ ++ ++S + KM+K+D L E M+ G +L T LL +C + A+
Sbjct: 80 SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILL---NCFCRCSQLSLAL 136
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNV---FPLEIKSFNIILN 288
+ + G + I F LL+ CR V DA ++ ++ V + + +N I++
Sbjct: 137 SFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF--DQMVGMGYKPNVVIYNTIID 194
Query: 289 GWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKIT 348
G C A + + M K GI DVV+Y S++S S + ++ M ++I
Sbjct: 195 GLCK-SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIY 253
Query: 349 PDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEV 408
PD +NA+I A K V EA + M + ++ PD+VTY+ LI LC ++DEA+E+
Sbjct: 254 PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEM 313
Query: 409 FNDMMKRNITPTIRTF----HAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFC 464
F M+ + P + T+ + + + +VE + +L +M + G TY +LI+ +C
Sbjct: 314 FGFMVSKGCFPDVVTYSILINGYCKSKKVEHGM-KLFCEMSQRGVVRNTVTYTILIQGYC 372
Query: 465 RWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKG 518
R KL+ +I+ M GV + +Y VL+HGL NGK+++A +MQ+ G
Sbjct: 373 RAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNG 426
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 143/288 (49%), Gaps = 5/288 (1%)
Query: 246 IDEFQGLLSALCRYKNVQDAEHLLFCNKNV-FPLEIKSFNIILNGWCNLIVSAREAERVW 304
I +F LLSA+ + K +L + + P + + NI+LN +C A
Sbjct: 81 IADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCR-CSQLSLALSFL 139
Query: 305 HEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKG 364
+M K G + +V++ S+++ + + ++Y +FDQM P+ +YN +I L K
Sbjct: 140 GKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKS 199
Query: 365 RLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTF 424
+ V A++LL MEK+ + PDVVTYNSLI LC + + +A + + M KR I P + TF
Sbjct: 200 KQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTF 259
Query: 425 HAFFRILRVE---EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMRE 481
+A E E E ++M P I TY +LI C + +LDE +++ M
Sbjct: 260 NALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVS 319
Query: 482 DGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
G D +Y +LI+G + KV+ + EM ++G + T +L
Sbjct: 320 KGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTIL 367
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 178/368 (48%), Gaps = 12/368 (3%)
Query: 160 FLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIR 219
FL + G+ S+ + S+++ + + A + + M G G P++V T+ I
Sbjct: 138 FLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTI---ID 194
Query: 220 KYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFC--NKNVFP 277
C + V A++ ++ G + + L+S LC DA ++ C + ++P
Sbjct: 195 GLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYP 254
Query: 278 LEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQ 337
++ +FN +++ C EAE + EM +R + D+V+Y+ ++ S+L + +
Sbjct: 255 -DVFTFNALIDA-CVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEE 312
Query: 338 LFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLC 397
+F M +K PD Y+ +I+ K + V+ + L M + V + VTY LI+ C
Sbjct: 313 MFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYC 372
Query: 398 KNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL----RVEEEVFELLDKMRELGCYPTI 453
+ K++ A+E+F M+ + P I T++ L ++E+ + L D M++ G I
Sbjct: 373 RAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD-MQKNGMDADI 431
Query: 454 ETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIE 513
TY ++IR C+ ++ + + I+ + G+ D +Y ++ GL+ G +EA + +
Sbjct: 432 VTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRK 491
Query: 514 MQRKGFLP 521
M+ G LP
Sbjct: 492 MKEDGILP 499
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 162/347 (46%), Gaps = 52/347 (14%)
Query: 153 WEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQ 212
++A + F G GY +V Y+++I L K ++ D A +L+ M G GP +VT
Sbjct: 168 YDALYMFDQMVGM--GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225
Query: 213 TLLIMIRKYCAVRDVGRAINTFYAFKR------FGFQVGIDE------------------ 248
+L+ + D R ++ KR F F ID
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMT--KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMI 283
Query: 249 ----------FQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCNLIVS 296
+ L+ LC Y + +AE + +K FP ++ +++I++NG+C
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFP-DVVTYSILINGYCK---- 338
Query: 297 AREAE---RVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKV 353
+++ E +++ EMS+RG+ + V+Y ++ Y ++ KL ++F +M + P+
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398
Query: 354 YNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMM 413
YN ++H L +++A+ +L M+KN + D+VTYN +I+ +CK ++ +A +++ +
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458
Query: 414 KRNITPTIRTFHAFFRILR---VEEEVFELLDKMRELGCYPTIETYI 457
+ + P I T+ L + E L KM+E G P E Y+
Sbjct: 459 CQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN-ECYV 504
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 102/223 (45%), Gaps = 11/223 (4%)
Query: 331 KLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYN 390
KL LF M + P ++ ++ A++K + + L + M+ + ++ T N
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 391 SLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTF----HAFFRILRVEEEVFELLDKMRE 446
L+ C+ ++ A M+K P+I TF + F R RV + ++ + D+M
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALY-MFDQMVG 179
Query: 447 LGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKE 506
+G P + Y +I C+ +++D + N M +DG+ D +Y LI GL +G+ +
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239
Query: 507 AHDYYIEMQRKGFLPEPKT-EQMLQAWLSGRQGTEGQVTDLEH 548
A M ++ P+ T ++ A + EG+V++ E
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVK-----EGRVSEAEE 277
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 173/357 (48%), Gaps = 13/357 (3%)
Query: 172 SVREYHSMI-SILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRA 230
+VR Y +I S+ G RK + A NL++ M G P++ T ++I C+ +A
Sbjct: 322 TVRTYTVLIKSLCGSERKSE-ALNLVKEMEETGIKPNI---HTYTVLIDSLCSQCKFEKA 377
Query: 231 INTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHL--LFCNKNVFPLEIKSFNIILN 288
G + + L++ C+ ++DA + L ++ + P +++N ++
Sbjct: 378 RELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSP-NTRTYNELIK 436
Query: 289 GWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKIT 348
G+C + +A V ++M +R + DVV+Y S++ +S ++L M ++ +
Sbjct: 437 GYCK--SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Query: 349 PDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEV 408
PD+ Y ++I +L K + V+EA +L ++E+ V P+VV Y +LI CK K+DEA +
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 409 FNDMMKRNITPTIRTFHAFFRILRVEEEVFE---LLDKMRELGCYPTIETYIMLIRKFCR 465
M+ +N P TF+A L + ++ E L +KM ++G PT+ T +LI + +
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK 614
Query: 466 WRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
D + + M G D +Y I G++ +A D +M+ G P+
Sbjct: 615 DGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPD 671
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 177/400 (44%), Gaps = 50/400 (12%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
++ Y+ M++ K+ + A + + G P T +L I YC +D+ A
Sbjct: 217 NIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSL---IMGYCQRKDLDSAF 273
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKN--VFPLEIKSFNIILNG 289
F G + + L+ LC + + +A L K+ FP ++++ +++
Sbjct: 274 KVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFP-TVRTYTVLIKS 332
Query: 290 WCNLIVSAREAE--RVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKI 347
C S R++E + EM + GI+ ++ +Y ++ K K +L QM K +
Sbjct: 333 LCG---SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 389
Query: 348 TPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKE 407
P+ YNA+I+ K ++++AV++++ ME ++P+ TYN LIK CK+ + +A
Sbjct: 390 MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMG 448
Query: 408 VFNDMMKRNITPTIRTFHAF-------------FRILRVE-------------------- 434
V N M++R + P + T+++ +R+L +
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508
Query: 435 -----EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRS 489
EE +L D + + G P + Y LI +C+ K+DE + M +
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL 568
Query: 490 SYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
++ LIHGL +GK+KEA +M + G P T+ +L
Sbjct: 569 TFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTIL 608
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 176/385 (45%), Gaps = 33/385 (8%)
Query: 152 DWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTP 211
D + A F W + P Y HSV Y S++++L + G G V
Sbjct: 102 DPKTALNFSHWISQNPRYKHSVYSYASLLTLL---------------INNGYVG---VVF 143
Query: 212 QTLLIMIRKYCAVR------DVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDA 265
+ L+MI+ +V D+ R +N F+ +++ I + LL++L R+ V +
Sbjct: 144 KIRLLMIKSCDSVGDALYVLDLCRKMNKDERFE-LKYKLIIGCYNTLLNSLARFGLVDEM 202
Query: 266 E--HLLFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIM 323
+ ++ V P I ++N ++NG+C L + EA + ++ + G+ D +Y S++
Sbjct: 203 KQVYMEMLEDKVCP-NIYTYNKMVNGYCKL-GNVEEANQYVSKIVEAGLDPDFFTYTSLI 260
Query: 324 SCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVT 383
Y + L F++F++M K + Y +IH L R + EA++L M+ +
Sbjct: 261 MGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECF 320
Query: 384 PDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFEL 440
P V TY LIK LC + + EA + +M + I P I T+ L + E+ EL
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 441 LDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFL 500
L +M E G P + TY LI +C+ +++ + +M +S + +Y LI G +
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG-YC 439
Query: 501 NGKVKEAHDYYIEMQRKGFLPEPKT 525
V +A +M + LP+ T
Sbjct: 440 KSNVHKAMGVLNKMLERKVLPDVVT 464
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 108/242 (44%), Gaps = 12/242 (4%)
Query: 317 VSYASIMSCYSKSSKLYKVFQLFDQMKN-------KKITPDRKVYNAVIHALAKGRLVKE 369
+ Y I+ CY+ F L D+MK K+ P+ YN +++ K V+E
Sbjct: 177 LKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEE 236
Query: 370 AVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDM----MKRNITPTIRTFH 425
A + + + + PD TY SLI C+ + +D A +VFN+M +RN H
Sbjct: 237 ANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIH 296
Query: 426 AFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVS 485
R++E +L KM++ C+PT+ TY +LI+ C + E + M E G+
Sbjct: 297 GLCVARRIDE-AMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIK 355
Query: 486 HDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTD 545
+ +Y VLI L K ++A + +M KG +P T L R E V
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415
Query: 546 LE 547
+E
Sbjct: 416 VE 417
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 176/405 (43%), Gaps = 32/405 (7%)
Query: 173 VREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAIN 232
V Y+S+I + FD+A+ L+ +M G P T + MI C + V A +
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS---MIDSLCKSKRVEEACD 518
Query: 233 TFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGW 290
F + ++ G + + L+ C+ V +A +L +KN P + +FN +++G
Sbjct: 519 LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL-TFNALIHGL 577
Query: 291 CNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPD 350
C +EA + +M K G+Q V + ++ K + F QM + PD
Sbjct: 578 CA-DGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPD 636
Query: 351 RKVYNAVIHALAK-GRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVF 409
Y I + GRL+ +A +++ M +N V+PD+ TY+SLIK + + A +V
Sbjct: 637 AHTYTTFIQTYCREGRLL-DAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVL 695
Query: 410 NDMMKRNITPTIRTFHAFFR-ILRVE--------------------EEVFELLDKMRELG 448
M P+ TF + + +L ++ + V ELL+KM E
Sbjct: 696 KRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHS 755
Query: 449 CYPTIETYIMLIRKFCRWRKLDEVFKIWN-MMREDGVSHDRSSYIVLIHGLFLNGKVKEA 507
P ++Y LI C L K+++ M R +G+S + L+ K EA
Sbjct: 756 VTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEA 815
Query: 508 HDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDLEHNQLE 552
+M G LP+ ++ ++L L ++G + + T + N L+
Sbjct: 816 AKVVDDMICVGHLPQLESCKVLICGLY-KKGEKERGTSVFQNLLQ 859
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 183/379 (48%), Gaps = 13/379 (3%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
S+ E++ ++S + KM KF+ +L E M+ G L T I I +C + A+
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS---IFINCFCRRSQLSLAL 138
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNV---FPLEIKSFNIILN 288
+ G++ I LL+ C K + DA L+ ++ V + + +F +++
Sbjct: 139 AVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV--DQMVEMGYKPDTFTFTTLIH 196
Query: 289 GWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKIT 348
G L A EA + +M +RG Q D+V+Y ++++ K + L ++M+ +I
Sbjct: 197 GL-FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIK 255
Query: 349 PDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEV 408
+ ++N +I +L K R V+ AV+L ME + P+VVTYNSLI LC + +A +
Sbjct: 256 ANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRL 315
Query: 409 FNDMMKRNITPTIRTFHAFFRILRVEEEVFE---LLDKMRELGCYPTIETYIMLIRKFCR 465
++M+++ I P + TF+A E ++ E L ++M + P TY +LI FC
Sbjct: 316 LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM 375
Query: 466 WRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT 525
+LDE +++ M + +Y LI+G +V++ + + EM ++G + T
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVT 435
Query: 526 -EQMLQAWLSGRQGTEGQV 543
++Q + Q+
Sbjct: 436 YTTIIQGFFQAGDCDSAQM 454
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 172/389 (44%), Gaps = 56/389 (14%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
GY + ++I L K A L++ M G P LVT T+ + C D+
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV---VNGLCKRGDI 239
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIIL 287
A+N + + + F ++ +LC+Y++V+ A L
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDL------------------- 280
Query: 288 NGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKI 347
+ EM +GI+ +VV+Y S+++C + +L M KKI
Sbjct: 281 ----------------FTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI 324
Query: 348 TPDRKVYNAVIHALAK-GRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAK 406
P+ +NA+I A K G+LV EA L + M + ++ PD +TYN LI C + ++DEAK
Sbjct: 325 NPNVVTFNALIDAFFKEGKLV-EAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAK 383
Query: 407 EVFNDMMKRNITPTIRTF----HAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRK 462
++F M+ ++ P I+T+ + F + RVE+ V EL +M + G TY +I+
Sbjct: 384 QMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGV-ELFREMSQRGLVGNTVTYTTIIQG 442
Query: 463 FCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYY-----IEMQRK 517
F + D ++ M + V D +Y +L+HGL GK+ A + EM+
Sbjct: 443 FFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELN 502
Query: 518 GFLPEPKTEQMLQAWLSGRQGTEGQVTDL 546
F+ E M +A G G+ DL
Sbjct: 503 IFIYNTMIEGMCKA------GKVGEAWDL 525
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 169/369 (45%), Gaps = 43/369 (11%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAIN--- 232
++++I L K R + A +L M G P++VT +L+ + Y D R ++
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 233 ---------TFYAFKRFGFQVG----------------ID----EFQGLLSALCRYKNVQ 263
TF A F+ G ID + L++ C + +
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 264 DAEHLL--FCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYAS 321
+A+ + +K+ P I+++N ++NG+C + ++ EMS+RG+ + V+Y +
Sbjct: 381 EAKQMFKFMVSKDCLP-NIQTYNTLINGFCK-CKRVEDGVELFREMSQRGLVGNTVTYTT 438
Query: 322 IMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNN 381
I+ + ++ +F QM + ++ D Y+ ++H L + A+ + + ++K+
Sbjct: 439 IIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE 498
Query: 382 VTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL---RVEEEVF 438
+ ++ YN++I+ +CK K+ EA ++F + +I P + T++ L R+ +E
Sbjct: 499 MELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEAD 555
Query: 439 ELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGL 498
+L KM+E G P TY LIR R ++ MR G D S+ I L+ +
Sbjct: 556 DLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDAST-ISLVTNM 614
Query: 499 FLNGKVKEA 507
+G++ ++
Sbjct: 615 LHDGRLDKS 623
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 129/288 (44%), Gaps = 12/288 (4%)
Query: 294 IVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKV 353
I+ +A ++ +M K +V + ++S +K +K V L +QM+ I+ D
Sbjct: 61 IIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120
Query: 354 YNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMM 413
Y+ I+ + + A+ +L M K PD+VT +SL+ C +++I +A + + M+
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 414 KRNITPTIRTF----HAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKL 469
+ P TF H F + E V L+D+M + GC P + TY ++ C+ +
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAV-ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 470 DEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
D + N M + + + +I L V+ A D + EM+ KG P T L
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 530 QAWLSGRQGTEGQVTDLEHNQLEDDTVEKKVKATPSKFDKE-KAFLRE 576
L G+ +D ++L + +EKK+ F+ AF +E
Sbjct: 300 INCLCNY----GRWSD--ASRLLSNMLEKKINPNVVTFNALIDAFFKE 341
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 181/402 (45%), Gaps = 37/402 (9%)
Query: 155 AAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVM---RGGGTGPSL--- 208
+ F FF + QPG+ +V Y + L F A +LIE++ +G + S+
Sbjct: 100 SIFAFFKFISSQPGFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFIS 159
Query: 209 -----VTPQTLLIMIRKYCAVRDVG---RAINTFYAFKRFGFQVGIDEFQGLLSALCR-- 258
VTP ++ D+G AI F ++ F V I LL + +
Sbjct: 160 LVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLN 219
Query: 259 --------YKNVQDAEHLLFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKR 310
Y + DA FPL + FNI++N +C + +A++V+ E++KR
Sbjct: 220 PTGTIWGFYMEILDAG---------FPLNVYVFNILMNKFCKE-GNISDAQKVFDEITKR 269
Query: 311 GIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEA 370
+Q VVS+ ++++ Y K L + F+L QM+ + PD Y+A+I+AL K + A
Sbjct: 270 SLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGA 329
Query: 371 VNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRI 430
L M K + P+ V + +LI +N +ID KE + M+ + + P I ++
Sbjct: 330 HGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNG 389
Query: 431 LRVEEEVF---ELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHD 487
++ ++D M G P TY LI FCR ++ +I M ++G+ D
Sbjct: 390 FCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELD 449
Query: 488 RSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
R + L+ G+ G+V +A EM R G P+ T M+
Sbjct: 450 RVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMM 491
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 145/302 (48%), Gaps = 20/302 (6%)
Query: 206 PSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDA 265
P++V+ TL I YC V ++ + ++ + + + L++ALC+ +N D
Sbjct: 273 PTVVSFNTL---INGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCK-ENKMDG 328
Query: 266 EHLLF---CNKNVFPLEIKSFNII----LNGWCNLIVSAREAERVWHEMSKRGIQHDVVS 318
H LF C + + P ++ +I NG +L+ + + +M +G+Q D+V
Sbjct: 329 AHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLM------KESYQKMLSKGLQPDIVL 382
Query: 319 YASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTME 378
Y ++++ + K+ L + D M + + PD+ Y +I +G V+ A+ + + M+
Sbjct: 383 YNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMD 442
Query: 379 KNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEV- 437
+N + D V +++L+ +CK ++ +A+ +M++ I P T+ + +
Sbjct: 443 QNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQ 502
Query: 438 --FELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLI 495
F+LL +M+ G P++ TY +L+ C+ ++ + + M GV D +Y L+
Sbjct: 503 TGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562
Query: 496 HG 497
G
Sbjct: 563 EG 564
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 9/199 (4%)
Query: 199 MRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCR 258
M G P +V TL + +C D+ A N R G + + L+ CR
Sbjct: 371 MLSKGLQPDIVLYNTL---VNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCR 427
Query: 259 YKNVQDA-EHLLFCNKNVFPLEIKSFNIILNGWCNLIVSAR--EAERVWHEMSKRGIQHD 315
+V+ A E ++N L+ F+ ++ G C R +AER EM + GI+ D
Sbjct: 428 GGDVETALEIRKEMDQNGIELDRVGFSALVCGMCK---EGRVIDAERALREMLRAGIKPD 484
Query: 316 VVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQ 375
V+Y +M + K F+L +M++ P YN +++ L K +K A LL
Sbjct: 485 DVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLD 544
Query: 376 TMEKNNVTPDVVTYNSLIK 394
M V PD +TYN+L++
Sbjct: 545 AMLNIGVVPDDITYNTLLE 563
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 113/258 (43%), Gaps = 7/258 (2%)
Query: 173 VREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAIN 232
V Y ++I+ L K K D A L + M G P+ V TL I + ++
Sbjct: 310 VFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTL---IHGHSRNGEIDLMKE 366
Query: 233 TFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGW 290
++ G Q I + L++ C+ ++ A +++ + + P +I ++ +++G+
Sbjct: 367 SYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKI-TYTTLIDGF 425
Query: 291 CNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPD 350
C A + EM + GI+ D V +++++ K ++ + +M I PD
Sbjct: 426 CRG-GDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPD 484
Query: 351 RKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFN 410
Y ++ A K + LL+ M+ + P VVTYN L+ LCK ++ A + +
Sbjct: 485 DVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLD 544
Query: 411 DMMKRNITPTIRTFHAFF 428
M+ + P T++
Sbjct: 545 AMLNIGVVPDDITYNTLL 562
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 180/384 (46%), Gaps = 18/384 (4%)
Query: 150 RNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLV 209
++D A FF WA +Q Y H Y+SM+ +L K + + ++ +M+ G
Sbjct: 184 QDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGI---YR 240
Query: 210 TPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL 269
TP+ ++ Y + A+ +R G + + + R ++ A L
Sbjct: 241 TPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKA--LR 298
Query: 270 FCNK----NVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSC 325
F + + P + ++N ++ G+C+L EA + +M +G D VSY +IM
Sbjct: 299 FLERMQVVGIVP-NVVTYNCMIRGYCDLH-RVEEAIELLEDMHSKGCLPDKVSYYTIMGY 356
Query: 326 YSKSSKLYKVFQLFDQM-KNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTP 384
K ++ +V L +M K + PD+ YN +IH L K EA+ L+ ++
Sbjct: 357 LCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRI 416
Query: 385 DVVTYNSLIKPLCKNRKIDEAKEVFNDMM-KRNITPTIRTFHA----FFRILRVEEEVFE 439
D + Y++++ LCK ++ EAK++ N+M+ K + P + T+ A F R+ V++ +
Sbjct: 417 DKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDK-AKK 475
Query: 440 LLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLF 499
LL M G P +Y L+ CR K E ++ NM E S + +Y V++HGL
Sbjct: 476 LLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLR 535
Query: 500 LNGKVKEAHDYYIEMQRKGFLPEP 523
GK+ EA D EM KGF P P
Sbjct: 536 REGKLSEACDVVREMVLKGFFPGP 559
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/416 (19%), Positives = 150/416 (36%), Gaps = 42/416 (10%)
Query: 150 RNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLV 209
++D +FL ++ G+ Y +++ L K + A +LI M G P V
Sbjct: 395 KHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDV 454
Query: 210 TPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL 269
T ++ +C + +V +A G + + LL+ +CR +A ++
Sbjct: 455 VTYT--AVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMM 512
Query: 270 ------------------------------FCN-------KNVFPLEIKSFNIILNGWCN 292
C+ K FP ++ N++L C
Sbjct: 513 NMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVE-INLLLQSLCR 571
Query: 293 LIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRK 352
EA + E +G +VV++ +++ + ++ +L + D M D
Sbjct: 572 -DGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVF 630
Query: 353 VYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDM 412
Y ++ L K + EA L++ M + P VTY ++I C+ K+D+ + M
Sbjct: 631 TYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKM 690
Query: 413 MKRNITPTI-RTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDE 471
+ R TI +L EE LL K+ +T L+ + +
Sbjct: 691 ISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLS 750
Query: 472 VFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQ 527
+K+ M + D L L L GKV EA + + +G + +Q
Sbjct: 751 AYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISPQSLKQ 806
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 179/391 (45%), Gaps = 44/391 (11%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
S+ +++ ++S + K++K+D +L + M G L T I+I +C V A+
Sbjct: 84 SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN---IVINCFCCCFQVSLAL 140
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIILNGWC 291
+ + G++ L++ CR V DA L+
Sbjct: 141 SILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV---------------------- 178
Query: 292 NLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDR 351
+M + G + D+V+Y +I+ K+ ++ F F +++ K I P+
Sbjct: 179 -------------DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNV 225
Query: 352 KVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFND 411
Y A+++ L +A LL M K +TP+V+TY++L+ KN K+ EAKE+F +
Sbjct: 226 VTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEE 285
Query: 412 MMKRNITPTIRTFHAFFRILRVEEEVFE---LLDKMRELGCYPTIETYIMLIRKFCRWRK 468
M++ +I P I T+ + L + + + E + D M GC + +Y LI FC+ ++
Sbjct: 286 MVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKR 345
Query: 469 LDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQM 528
+++ K++ M + G+ + +Y LI G F G V +A +++ +M G P+ T +
Sbjct: 346 VEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNI 405
Query: 529 LQAWLSGRQGTEGQVT---DLEHNQLEDDTV 556
L L E + D++ +++ D V
Sbjct: 406 LLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 181/376 (48%), Gaps = 33/376 (8%)
Query: 180 ISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKR 239
+SILGKM K G P VT +L + +C V A++
Sbjct: 140 LSILGKMLKL-------------GYEPDRVTIGSL---VNGFCRRNRVSDAVSLVDKMVE 183
Query: 240 FGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCNLIVSA 297
G++ I + ++ +LC+ K V DA K + P + ++ ++NG CN S+
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRP-NVVTYTALVNGLCN---SS 239
Query: 298 R--EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYN 355
R +A R+ +M K+ I +V++Y++++ + K+ K+ + +LF++M I PD Y+
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299
Query: 356 AVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKR 415
++I+ L + EA + M DVV+YN+LI CK +++++ ++F +M +R
Sbjct: 300 SLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359
Query: 416 NITPTIRTFH----AFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDE 471
+ T++ FF+ V++ E +M G P I TY +L+ C +L++
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQ-EFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418
Query: 472 VFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQA 531
I+ M++ + D +Y +I G+ GKV+EA + + KG P+ T + +
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 478
Query: 532 WLSGRQGTEGQVTDLE 547
L T+G + ++E
Sbjct: 479 GLC----TKGLLHEVE 490
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 150/323 (46%), Gaps = 45/323 (13%)
Query: 166 QPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLL---------- 215
+ GY + Y+++I L K ++ + A++ + + G P++VT L+
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 216 -------IMIRK--------YCAVRD-------VGRAINTFYAFKRFGFQVGIDEFQGLL 253
MI+K Y A+ D V A F R I + L+
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 254 SALCRYKNVQDAEHL--LFCNKNVFPLEIKSFNIILNGWCNLIVSAREAE---RVWHEMS 308
+ LC + + +A + L +K ++ S+N ++NG+C A+ E +++ EMS
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLA-DVVSYNTLINGFCK----AKRVEDGMKLFREMS 357
Query: 309 KRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVK 368
+RG+ + V+Y +++ + ++ + K + F QM I+PD YN ++ L ++
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417
Query: 369 EAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFF 428
+A+ + + M+K + D+VTY ++I+ +CK K++EA +F + + + P I T+
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477
Query: 429 RILRVE---EEVFELLDKMRELG 448
L + EV L KM++ G
Sbjct: 478 SGLCTKGLLHEVEALYTKMKQEG 500
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 114/271 (42%), Gaps = 9/271 (3%)
Query: 295 VSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVY 354
+ +A ++ +M K +V + ++S K K V L +M+ I D +
Sbjct: 64 IKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 123
Query: 355 NAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMK 414
N VI+ V A+++L M K PD VT SL+ C+ ++ +A + + M++
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 415 RNITPTIRTFHAFFRILRVEEEVFELLDKMREL---GCYPTIETYIMLIRKFCRWRKLDE 471
P I ++A L + V + D +E+ G P + TY L+ C + +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 472 VFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQA 531
++ + M + ++ + +Y L+ NGKV EA + + EM R P+ T L
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 532 WLSGRQGTEGQVTDLEHNQLEDDTVEKKVKA 562
L + E NQ+ D V K A
Sbjct: 304 GLCLHDRID------EANQMFDLMVSKGCLA 328
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 58/420 (13%)
Query: 154 EAAFTFFLWAGK-QPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQ 212
+ A FL+AGK PG+ H+ YHS++ L + R FD +L+ +R + P + +
Sbjct: 63 DLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRN--SYPPIKCGE 120
Query: 213 TLLI-MIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFC 271
L I ++R Y ++ F FG + + LL+ L + + D H +F
Sbjct: 121 NLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRF-DLVHAMFK 179
Query: 272 NKNVFPLEIKSFNIILNGW-CNLIVSA-------REAERVWHEMSKRGIQHDVVSYASIM 323
N +SF I N + CNL+V A A +V E+ G+ ++V+Y +I+
Sbjct: 180 NSK------ESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTIL 233
Query: 324 SCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVT 383
Y + ++ ++M ++ PD Y ++ K EA ++ MEKN +
Sbjct: 234 GGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIE 293
Query: 384 PDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITP----TIRTFHAFFRILRVEE---- 435
P+ VTY +I+ LCK +K EA+ +F++M++R+ P + A +V+E
Sbjct: 294 PNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGL 353
Query: 436 ------------------------------EVFELLDKMRELGCYPTIETYIMLIRKFCR 465
E +L D+ E G P++ TY LI C
Sbjct: 354 WRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCE 412
Query: 466 WRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT 525
+L E ++W+ M E + +Y VLI GL NG VKE EM G P T
Sbjct: 413 KGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTT 472
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 154/349 (44%), Gaps = 17/349 (4%)
Query: 206 PSLVTPQTLLIMIRKYCAVRDVGRAINTF-YAFKRF-GFQVGIDEFQGLLSALCRYKNVQ 263
P + P+ L+ MI + +++ A+ F YA K GF D + +L L R +
Sbjct: 44 PQRLFPKRLVSMITQQ---QNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFD 100
Query: 264 DAEHLLFCNKNVFPLEIKSFNIILNGWCNLIVSAR--EAERVWHEMSKRGIQHDVVSYAS 321
E L+ +N +P N+ ++ N ++ R + R++ + G++ V S +
Sbjct: 101 PVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNT 160
Query: 322 IMSCYSKSSKLYKVFQLFDQMKNK-KITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKN 380
+++ ++ + V +F K ITP+ N ++ AL K ++ A +L +
Sbjct: 161 LLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSM 220
Query: 381 NVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTF----HAFFRILRVEEE 436
+ P++VTY +++ ++ AK V +M+ R P T+ + ++ R E
Sbjct: 221 GLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEA 280
Query: 437 VFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIH 496
++D M + P TY ++IR C+ +K E +++ M E D S +I
Sbjct: 281 A-TVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVID 339
Query: 497 GLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTD 545
L + KV EA + +M + +P+ L WL EG+VT+
Sbjct: 340 ALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLC----KEGRVTE 384
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 96/265 (36%), Gaps = 39/265 (14%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G+ Y ++ K+ +F A +++ M P+ VT +MIR C +
Sbjct: 256 GWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYG---VMIRALCKEKKS 312
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIIL 287
G A N F F ++ ALC V +A
Sbjct: 313 GEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEA---------------------- 350
Query: 288 NGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKI 347
C L W +M K D ++++ K ++ + +LFD+ + I
Sbjct: 351 ---CGL----------WRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI 397
Query: 348 TPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKE 407
P YN +I + + + EA L M + P+ TYN LI+ L KN + E
Sbjct: 398 -PSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVR 456
Query: 408 VFNDMMKRNITPTIRTFHAFFRILR 432
V +M++ P TF F L+
Sbjct: 457 VLEEMLEIGCFPNKTTFLILFEGLQ 481
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 166/363 (45%), Gaps = 10/363 (2%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
+V +++ + S + K ++++ L + M G S+ TL IMI +C R + A
Sbjct: 87 TVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSI---YTLSIMINCFCRCRKLSYAF 143
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNG 289
+T + G++ F LL+ LC V +A L+ P I + N ++NG
Sbjct: 144 STMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLI-TLNTLVNG 202
Query: 290 WCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITP 349
C L +A + M + G Q + V+Y +++ KS + +L +M+ + I
Sbjct: 203 LC-LNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 350 DRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVF 409
D Y+ +I L K + A NL ME D++TYN+LI C + D+ ++
Sbjct: 262 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLL 321
Query: 410 NDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIMLIRKFCRW 466
DM+KR I+P + TF E E +LL +M + G P TY LI FC+
Sbjct: 322 RDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKE 381
Query: 467 RKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTE 526
+L+E ++ ++M G D ++ +LI+G ++ + + + EM +G + T
Sbjct: 382 NRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTY 441
Query: 527 QML 529
L
Sbjct: 442 NTL 444
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 167/370 (45%), Gaps = 10/370 (2%)
Query: 165 KQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAV 224
+ G AHS+ MI+ + RK A++ + + G P V TLL C
Sbjct: 115 ESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLL---NGLCLE 171
Query: 225 RDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKS 282
V A+ G + + L++ LC V DA L+ P E+ +
Sbjct: 172 CRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEV-T 230
Query: 283 FNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQM 342
+ +LN C +A E + +M +R I+ D V Y+ I+ K L F LF++M
Sbjct: 231 YGPVLNVMCKSGQTALAME-LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289
Query: 343 KNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKI 402
+ K D YN +I + LL+ M K ++P+VVT++ LI K K+
Sbjct: 290 EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKL 349
Query: 403 DEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIML 459
EA ++ +MM+R I P T+++ E EE +++D M GC P I T+ +L
Sbjct: 350 READQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNIL 409
Query: 460 IRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGF 519
I +C+ ++D+ +++ M GV + +Y L+ G +GK++ A + EM +
Sbjct: 410 INGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469
Query: 520 LPEPKTEQML 529
P+ + ++L
Sbjct: 470 RPDIVSYKIL 479
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 175/377 (46%), Gaps = 11/377 (2%)
Query: 216 IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNK 273
I+I C + A N F + GF+ I + L+ C D LL +
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 274 NVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLY 333
+ P + +F+++++ + REA+++ EM +RGI + ++Y S++ + K ++L
Sbjct: 328 KISP-NVVTFSVLIDSFVKE-GKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 334 KVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLI 393
+ Q+ D M +K PD +N +I+ K + + + L + M V + VTYN+L+
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 394 KPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCY 450
+ C++ K++ AK++F +M+ R + P I ++ L E+ E+ K+ +
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505
Query: 451 PTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDY 510
I Y+++I C K+D+ + ++ + GV D +Y ++I L + +A
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADIL 565
Query: 511 YIEMQRKGFLPEPKTEQML-QAWLSGRQGTEGQ--VTDLEHNQLEDD-TVEKKVKATPSK 566
+ +M +G P+ T +L +A L T + +++ + D + K V S
Sbjct: 566 FRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSS 625
Query: 567 FDKEKAFLREPETRRVT 583
+ +K+FL T R +
Sbjct: 626 GELDKSFLDMLSTTRAS 642
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 107/228 (46%), Gaps = 3/228 (1%)
Query: 295 VSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVY 354
+ A +A ++ +M + V+ + + S +K+ + V L QM++K I
Sbjct: 67 IKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTL 126
Query: 355 NAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMK 414
+ +I+ + R + A + + + K PD V +N+L+ LC ++ EA E+ + M++
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVE 186
Query: 415 RNITPTIRTFHAFFRILRVEEEVFE---LLDKMRELGCYPTIETYIMLIRKFCRWRKLDE 471
PT+ T + L + +V + L+D+M E G P TY ++ C+ +
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 472 VFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGF 519
++ M E + D Y ++I GL +G + A + + EM+ KGF
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 294
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 133/297 (44%), Gaps = 18/297 (6%)
Query: 184 GKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQ 243
GK+R+ D L++ M G P+ +T +L I +C + AI G
Sbjct: 347 GKLREAD---QLLKEMMQRGIAPNTITYNSL---IDGFCKENRLEEAIQMVDLMISKGCD 400
Query: 244 VGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCNLIVSAR--E 299
I F L++ C+ + D L + V + ++N ++ G+C S +
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV-TYNTLVQGFCQ---SGKLEV 456
Query: 300 AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIH 359
A++++ EM R ++ D+VSY ++ + +L K ++F +++ K+ D +Y +IH
Sbjct: 457 AKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIH 516
Query: 360 ALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITP 419
+ V +A +L ++ V D YN +I LC+ + +A +F M + P
Sbjct: 517 GMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAP 576
Query: 420 TIRTFHAFFRILRVEEE---VFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVF 473
T++ R +++ EL+++M+ G +P + + ++ +LD+ F
Sbjct: 577 DELTYNILIRAHLGDDDATTAAELIEEMKSSG-FPADVSTVKMVINMLSSGELDKSF 632
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 119/281 (42%), Gaps = 7/281 (2%)
Query: 166 QPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVR 225
Q G A + Y+S+I K + + A ++++M G P ++T I+I YC
Sbjct: 361 QRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFN---ILINGYCKAN 417
Query: 226 DVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSF 283
+ + F G + L+ C+ ++ A+ L ++ V P +I S+
Sbjct: 418 RIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP-DIVSY 476
Query: 284 NIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMK 343
I+L+G C+ +A ++ ++ K ++ D+ Y I+ +SK+ + LF +
Sbjct: 477 KILLDGLCD-NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLP 535
Query: 344 NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKID 403
K + D + YN +I L + + +A L + M + PD +TYN LI+ +
Sbjct: 536 LKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDAT 595
Query: 404 EAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKM 444
A E+ +M + T +L E LD +
Sbjct: 596 TAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDML 636
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 174/384 (45%), Gaps = 49/384 (12%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
S+ ++ ++S++ KM ++D +L E M+ G P L T I++ C RA
Sbjct: 82 SIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN---IVMHCVCLSSQPCRAS 138
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIILNGWC 291
+ GF+ + F LL+ C + ++DA I F+ IL
Sbjct: 139 CFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDA--------------IALFDQILG--- 181
Query: 292 NLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDR 351
G + +VV+Y +++ C K+ L +LF+QM P+
Sbjct: 182 ------------------MGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNV 223
Query: 352 KVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFND 411
YNA++ L + +A LL+ M K + P+V+T+ +LI K K+ EAKE++N
Sbjct: 224 VTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNV 283
Query: 412 MMKRNITPTIRTFHAFFRILRVEEEVFELLDKMREL-------GCYPTIETYIMLIRKFC 464
M++ ++ P + T+ + L ++ LLD+ R++ GCYP Y LI FC
Sbjct: 284 MIQMSVYPDVFTYGSLINGL----CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFC 339
Query: 465 RWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPK 524
+ +++++ KI+ M + GV + +Y VLI G L G+ A + + +M + P+ +
Sbjct: 340 KSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIR 399
Query: 525 TEQMLQAWLSGRQGTEGQVTDLEH 548
T +L L E + E+
Sbjct: 400 TYNVLLDGLCCNGKVEKALMIFEY 423
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 168/368 (45%), Gaps = 10/368 (2%)
Query: 160 FLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIR 219
FL + G+ + + S+++ + + A L + + G G P++VT TL IR
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTL---IR 196
Query: 220 KYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFP 277
C R + A+ F G + + + L++ LC DA LL + + P
Sbjct: 197 CLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEP 256
Query: 278 LEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQ 337
+ +F +++ + + EA+ +++ M + + DV +Y S+++ L + Q
Sbjct: 257 -NVITFTALIDAFVK-VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQ 314
Query: 338 LFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLC 397
+F M+ P+ +Y +IH K + V++ + + M + V + +TY LI+ C
Sbjct: 315 MFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYC 374
Query: 398 KNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIE 454
+ D A+EVFN M R P IRT++ L E+ + + MR+ I
Sbjct: 375 LVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIV 434
Query: 455 TYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEM 514
TY ++I+ C+ K+++ F ++ + G+ + +Y +I G G + EA + +M
Sbjct: 435 TYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Query: 515 QRKGFLPE 522
+ GFLP
Sbjct: 495 KEDGFLPN 502
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 169/339 (49%), Gaps = 14/339 (4%)
Query: 216 IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNK 273
I+I C A++ F + G + + + L+ LC D +L +
Sbjct: 250 IVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 309
Query: 274 NVFPLEIKSFNIILNGWCNLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSK 331
N+ P ++ +F+ +++ + + + EA+ +++EM RGI D ++Y S++ + K +
Sbjct: 310 NIIP-DVVTFSALIDVF---VKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 365
Query: 332 LYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNS 391
L++ Q+FD M +K PD Y+ +I++ K + V + + L + + + P+ +TYN+
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425
Query: 392 LIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEV---FELLDKMRELG 448
L+ C++ K++ AKE+F +M+ R + P++ T+ L E+ E+ +KM++
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Query: 449 CYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAH 508
I Y ++I C K+D+ + ++ + + GV D +Y V+I GL G + EA
Sbjct: 486 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545
Query: 509 DYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDLE 547
+ +M+ G P+ T +L + G G ++ +E
Sbjct: 546 MLFRKMKEDGCTPDDFTYNIL---IRAHLGGSGLISSVE 581
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 163/360 (45%), Gaps = 10/360 (2%)
Query: 175 EYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTF 234
+++ + S + + +++D + M G + T+ IMI YC + + A +
Sbjct: 72 DFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDM---YTMTIMINCYCRKKKLLFAFSVL 128
Query: 235 YAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCN 292
+ G++ F L++ C V +A L+ P ++ + + ++NG C
Sbjct: 129 GRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP-DLVTVSTLINGLC- 186
Query: 293 LIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRK 352
L EA + M + G Q D V+Y +++ KS LF +M+ + I
Sbjct: 187 LKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVV 246
Query: 353 VYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDM 412
Y+ VI +L K +A++L ME + DVVTY+SLI LC + K D+ ++ +M
Sbjct: 247 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306
Query: 413 MKRNITPTIRTFHAFFRILRVEEEVF---ELLDKMRELGCYPTIETYIMLIRKFCRWRKL 469
+ RNI P + TF A + E ++ EL ++M G P TY LI FC+ L
Sbjct: 307 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366
Query: 470 DEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
E +++++M G D +Y +LI+ +V + + E+ KG +P T L
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 142/330 (43%), Gaps = 43/330 (13%)
Query: 173 VREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAIN 232
V + ++I + K K A L M G P +T +L I +C + A
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL---IDGFCKENCLHEANQ 371
Query: 233 TFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGW 290
F G + I + L+++ C+ K V D L +K + P I ++N ++ G+
Sbjct: 372 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTI-TYNTLVLGF 430
Query: 291 CNLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKIT 348
C S + A+ ++ EM RG+ VV+Y ++ + +L K ++F++M+ ++T
Sbjct: 431 CQ---SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Query: 349 PDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEV 408
+YN +IH + V +A +L ++ V PDVVTYN +I LCK + EA
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA--- 544
Query: 409 FNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRK 468
DM+ R KM+E GC P TY +LIR
Sbjct: 545 --DMLFR---------------------------KMKEDGCTPDDFTYNILIRAHLGGSG 575
Query: 469 LDEVFKIWNMMREDGVSHDRSSYIVLIHGL 498
L ++ M+ G S D S+ ++I L
Sbjct: 576 LISSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 106/247 (42%), Gaps = 7/247 (2%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G A Y+S+I K A + ++M G P +VT I+I YC + V
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYS---ILINSYCKAKRV 401
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNI 285
+ F G + L+ C+ + A+ L ++ V P + ++ I
Sbjct: 402 DDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV-PPSVVTYGI 460
Query: 286 ILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNK 345
+L+G C+ +A ++ +M K + + Y I+ +SK+ + LF + +K
Sbjct: 461 LLDGLCD-NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 519
Query: 346 KITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEA 405
+ PD YN +I L K + EA L + M+++ TPD TYN LI+ + +
Sbjct: 520 GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISS 579
Query: 406 KEVFNDM 412
E+ +M
Sbjct: 580 VELIEEM 586
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 112/261 (42%), Gaps = 19/261 (7%)
Query: 157 FTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLI 216
F + G +P + Y +I+ K ++ D L + G P+ +T TL++
Sbjct: 373 FDLMVSKGCEP----DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 428
Query: 217 MIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF-CNKNV 275
+C + A F G + + LL LC + A + K+
Sbjct: 429 ---GFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Query: 276 FPLEIKSFNIILNGWCNLIVSAREAERVWH---EMSKRGIQHDVVSYASIMSCYSKSSKL 332
L I +NII++G CN A + + W +S +G++ DVV+Y ++ K L
Sbjct: 486 MTLGIGIYNIIIHGMCN----ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSL 541
Query: 333 YKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSL 392
+ LF +MK TPD YN +I A G + +V L++ M+ + D T +
Sbjct: 542 SEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMV 601
Query: 393 IKPLCKNRKIDEAKEVFNDMM 413
I L +R++D++ F DM+
Sbjct: 602 IDML-SDRRLDKS---FLDML 618
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 96/255 (37%), Gaps = 41/255 (16%)
Query: 285 IILNGWCNLIVSAREAERV---WHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQ 341
I N C+ + ++ + V M GI+HD+ + +++CY + KL F +
Sbjct: 71 IDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVL-- 128
Query: 342 MKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRK 401
GR K PD +T+++L+ C +
Sbjct: 129 ----------------------GRAWKLGYE-----------PDTITFSTLVNGFCLEGR 155
Query: 402 IDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFE---LLDKMRELGCYPTIETYIM 458
+ EA + + M++ P + T L ++ V E L+D+M E G P TY
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215
Query: 459 LIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKG 518
++ + C+ ++ M E + Y ++I L +G +A + EM+ KG
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 519 FLPEPKTEQMLQAWL 533
+ T L L
Sbjct: 276 IKADVVTYSSLIGGL 290
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 162/349 (46%), Gaps = 8/349 (2%)
Query: 183 LGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGF 242
LG +KFD A + S++ + I+I V A N F + GF
Sbjct: 145 LGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGF 204
Query: 243 QVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCNLIVSAREA 300
+ + + L+SA ++A ++ P I ++N+ILN + + +
Sbjct: 205 SLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLI-TYNVILNVFGKMGTPWNKI 263
Query: 301 ERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHA 360
+ +M GI D +Y ++++C + S + Q+F++MK + D+ YNA++
Sbjct: 264 TSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDV 323
Query: 361 LAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPT 420
K KEA+ +L M N +P +VTYNSLI ++ +DEA E+ N M ++ P
Sbjct: 324 YGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPD 383
Query: 421 IRTF----HAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIW 476
+ T+ F R +V E + ++MR GC P I T+ I+ + K E+ KI+
Sbjct: 384 VFTYTTLLSGFERAGKV-ESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIF 442
Query: 477 NMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT 525
+ + G+S D ++ L+ NG E + EM+R GF+PE +T
Sbjct: 443 DEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERET 491
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 143/322 (44%), Gaps = 28/322 (8%)
Query: 165 KQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMI------ 218
K+ G+ ++++IS + F+ A + M G P L T T+L +
Sbjct: 481 KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMW 540
Query: 219 ---RKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCR--YKNVQDAEHLLFCNK 273
K A + GR + + GL+ +L Y V + +L
Sbjct: 541 EQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVL---- 596
Query: 274 NVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLY 333
+K+ +++ C+L+ EAER + E+ +RG D+ + S++S Y + +
Sbjct: 597 ------LKTL-VLVCSKCDLL---PEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVA 646
Query: 334 KVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLI 393
K + D MK + TP YN++++ ++ ++ +L+ + + PD+++YN++I
Sbjct: 647 KANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVI 706
Query: 394 KPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCY 450
C+N ++ +A +F++M I P + T++ F + EE ++ M + GC
Sbjct: 707 YAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCR 766
Query: 451 PTIETYIMLIRKFCRWRKLDEV 472
P TY ++ +C+ + DE
Sbjct: 767 PNQNTYNSIVDGYCKLNRKDEA 788
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 169/397 (42%), Gaps = 49/397 (12%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G++ S+ Y+S+IS + D A L M GT P + T TLL + V
Sbjct: 344 GFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVES- 402
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPL--EIKSF 283
A++ F + G + I F + Y N ++ F NV L +I ++
Sbjct: 403 --AMSIFEEMRNAGCKPNICTFNAFIKM---YGNRGKFTEMMKIFDEINVCGLSPDIVTW 457
Query: 284 NIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMK 343
N +L + + + E V+ EM + G + ++ +++S YS+ + ++ +M
Sbjct: 458 NTLLAVFGQNGMDS-EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRML 516
Query: 344 NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKID 403
+ +TPD YN V+ ALA+G + +++ +L ME P+ +TY SL+ ++I
Sbjct: 517 DAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIG 576
Query: 404 -----------------------------------EAKEVFNDMMKRNITPTIRTFHAFF 428
EA+ F+++ +R +P I T ++
Sbjct: 577 LMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMV 636
Query: 429 RILRVEEEVFE---LLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVS 485
I + V + +LD M+E G P++ TY L+ R + +I + G+
Sbjct: 637 SIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIK 696
Query: 486 HDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
D SY +I+ N ++++A + EM+ G +P+
Sbjct: 697 PDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPD 733
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 157/350 (44%), Gaps = 22/350 (6%)
Query: 165 KQPGYAHSVREYHSMISILGKMRKFDTAWN----LIEVMRGGGTGPSLVTPQTLLIMIRK 220
++ G ++ Y+ ++++ GKM T WN L+E M+ G P T TL+ ++
Sbjct: 235 EEDGCKPTLITYNVILNVFGKM---GTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKR 291
Query: 221 YCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNK---NVFP 277
++ A F K GF + LL + ++A +L N+ N F
Sbjct: 292 GSLHQE---AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVL--NEMVLNGFS 346
Query: 278 LEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQ 337
I ++N +++ + + EA + ++M+++G + DV +Y +++S + ++ K+
Sbjct: 347 PSIVTYNSLISAYARDGM-LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMS 405
Query: 338 LFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLC 397
+F++M+N P+ +NA I E + + + ++PD+VT+N+L+
Sbjct: 406 IFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG 465
Query: 398 KNRKIDEAKEVFNDMMKRNITPTIRTFH----AFFRILRVEEEVFELLDKMRELGCYPTI 453
+N E VF +M + P TF+ A+ R E+ + +M + G P +
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF-EQAMTVYRRMLDAGVTPDL 524
Query: 454 ETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGK 503
TY ++ R ++ K+ M + + +Y L+H + NGK
Sbjct: 525 STYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA-YANGK 573
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 120/250 (48%), Gaps = 17/250 (6%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y S++ ++ +L E + G P V +TL+++ K + + RA F
Sbjct: 562 YCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERA---FS 618
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL-FCNKNVFPLEIKSFNIILNGWCNLI 294
K GF I ++S R + V A +L + + F + ++N ++
Sbjct: 619 ELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM------Y 672
Query: 295 VSAREA-----ERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITP 349
+ +R A E + E+ +GI+ D++SY +++ Y +++++ ++F +M+N I P
Sbjct: 673 MHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVP 732
Query: 350 DRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVF 409
D YN I + A + +EA+ +++ M K+ P+ TYNS++ CK + DEAK
Sbjct: 733 DVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFV 792
Query: 410 NDMMKRNITP 419
D+ RN+ P
Sbjct: 793 EDL--RNLDP 800
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/374 (19%), Positives = 155/374 (41%), Gaps = 47/374 (12%)
Query: 165 KQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAV 224
+ G ++ +++ I + G KF + + + G P +VT TLL + +
Sbjct: 411 RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMD 470
Query: 225 RDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKS 282
+V F KR GF + F L+SA R + + A + + V P ++ +
Sbjct: 471 SEVS---GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTP-DLST 526
Query: 283 FNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCY---------------- 326
+N +L + ++E+V EM + + ++Y S++ Y
Sbjct: 527 YNTVLAALARGGM-WEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV 585
Query: 327 -------------------SKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLV 367
SK L + + F ++K + +PD N+++ + ++V
Sbjct: 586 YSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMV 645
Query: 368 KEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTF--- 424
+A +L M++ TP + TYNSL+ ++ +++E+ +++ + I P I ++
Sbjct: 646 AKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTV 705
Query: 425 -HAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDG 483
+A+ R R+ + + +MR G P + TY I + +E + M + G
Sbjct: 706 IYAYCRNTRM-RDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHG 764
Query: 484 VSHDRSSYIVLIHG 497
++++Y ++ G
Sbjct: 765 CRPNQNTYNSIVDG 778
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 7/227 (3%)
Query: 334 KVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLI 393
+ F F + K+ + D V +I L K V A N+ ++++ + DV +Y SLI
Sbjct: 156 RAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLI 215
Query: 394 KPLCKNRKIDEAKEVFNDMMKRNITPTIRTF----HAFFRILRVEEEVFELLDKMRELGC 449
+ + EA VF M + PT+ T+ + F ++ ++ L++KM+ G
Sbjct: 216 SAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGI 275
Query: 450 YPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHD 509
P TY LI R E +++ M+ G S+D+ +Y L+ + + KEA
Sbjct: 276 APDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMK 335
Query: 510 YYIEMQRKGFLPEPKT-EQMLQAWLSGRQGTEGQVTDLEHNQLEDDT 555
EM GF P T ++ A+ R G + +L++ E T
Sbjct: 336 VLNEMVLNGFSPSIVTYNSLISAY--ARDGMLDEAMELKNQMAEKGT 380
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 188/383 (49%), Gaps = 24/383 (6%)
Query: 166 QPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVR 225
+ G V ++++I+ L + A L+ M G G +VT T+ + C +
Sbjct: 219 EIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI---VNGMCKMG 275
Query: 226 DVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSF 283
D A+N + + + + ++ LC+ + DA++L K + P + ++
Sbjct: 276 DTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP-NVFTY 334
Query: 284 NIILNGWCNLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQ 341
N +++G+C+ R +A+R+ +M +R I DV+++ +++S K KL++ +L D+
Sbjct: 335 NCMIDGFCSF---GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 391
Query: 342 MKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRK 401
M ++ I PD YN++I+ K +A ++ M +PDVVT+N++I C+ ++
Sbjct: 392 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKR 447
Query: 402 IDEAKEVFNDMMKRNITPTIRTF----HAFFRI--LRVEEEVFELLDKMRELGCYPTIET 455
+DE ++ ++ +R + T+ H F + L +++F+ +M G P T
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ---EMISHGVCPDTIT 504
Query: 456 YIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQ 515
+L+ FC KL+E +++ +++ + D +Y ++IHG+ KV EA D + +
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP 564
Query: 516 RKGFLPEPKTEQMLQAWLSGRQG 538
G P+ +T ++ + G+
Sbjct: 565 IHGVEPDVQTYNVMISGFCGKSA 587
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 155/365 (42%), Gaps = 53/365 (14%)
Query: 216 IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL------ 269
I+I+ +C + +++TF + GFQ + F LL LC + +A L
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 270 -----------FCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVS 318
+ P+ I +FN ++NG C L EA + ++M +G+ DVV+
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVI-TFNTLINGLC-LEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 319 YASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTME 378
Y +I++ K L +M+ I PD +Y+A+I L K +A L M
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 379 KNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVF 438
+ + P+V TYN +I C + +A+ + DM++R I P + TF+A E ++F
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 439 E---LLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMM---------------- 479
E L D+M +P TY +I FC+ + D+ ++++M
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYC 443
Query: 480 ---RED------------GVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPK 524
R D G+ + ++Y LIHG + A D + EM G P+
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 503
Query: 525 TEQML 529
T +L
Sbjct: 504 TCNIL 508
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 131/332 (39%), Gaps = 75/332 (22%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y+SMI K +FD A ++ ++M P +VT T+ I YC + V +
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTI---IDVYCRAKRVDEGMQLLR 456
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIILNGWCNLIV 295
R G + L+ C N+
Sbjct: 457 EISRRGLVANTTTYNTLIHGFCEVDNLN-------------------------------- 484
Query: 296 SAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYN 355
A+ ++ EM G+ D ++ ++ + ++ KL + +LF+ ++ KI D YN
Sbjct: 485 ---AAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541
Query: 356 AVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKR 415
+IH + KG V EA +L ++ + V PDV TYN +I C I +A +F+
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH----- 596
Query: 416 NITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKI 475
KM++ G P TY LIR + ++D+ ++
Sbjct: 597 ---------------------------KMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629
Query: 476 WNMMREDGVSHDRSSYIVLIHGLFLNGKVKEA 507
+ MR +G S D + I ++ L +G++ ++
Sbjct: 630 ISEMRSNGFSGDAFT-IKMVADLITDGRLDKS 660
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 104/244 (42%), Gaps = 18/244 (7%)
Query: 300 AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIH 359
A ++ +M R I ++ S+ ++ C+ KL F ++ PD +N ++H
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 360 ALAK-----------GRLVK----EAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDE 404
L G +V+ EAV L M + +TP V+T+N+LI LC ++ E
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 405 AKEVFNDMMKRNITPTIRTFHAFFR---ILRVEEEVFELLDKMRELGCYPTIETYIMLIR 461
A + N M+ + + + T+ + + LL KM E P + Y +I
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304
Query: 462 KFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
+ C+ + +++ M E G++ + +Y +I G G+ +A +M + P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364
Query: 522 EPKT 525
+ T
Sbjct: 365 DVLT 368
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 96/225 (42%), Gaps = 19/225 (8%)
Query: 337 QLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPL 396
L+ +M+ ++I + +N +I + +++ + K PDVVT+N+L+ L
Sbjct: 127 SLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGL 186
Query: 397 CKNRKID---------------EAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFE-- 439
C +I EA +F+ M++ +TP + TF+ L +E V E
Sbjct: 187 CLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA 246
Query: 440 -LLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGL 498
L++KM G + + TY ++ C+ + + M E + D Y +I L
Sbjct: 247 ALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306
Query: 499 FLNGKVKEAHDYYIEMQRKGFLPEPKT-EQMLQAWLSGRQGTEGQ 542
+G +A + EM KG P T M+ + S + ++ Q
Sbjct: 307 CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 104/251 (41%), Gaps = 24/251 (9%)
Query: 355 NAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMK 414
N VI + A++L + ME + ++ ++N LIK C K+ + F + K
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 415 RNITPTIRTFHAFFRILRVEEEVFE------------------LLDKMRELGCYPTIETY 456
P + TF+ L +E+ + E L D+M E+G P + T+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 457 IMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQR 516
LI C ++ E + N M G+ D +Y +++G+ G K A + +M+
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 517 KGFLPEPKTEQMLQAWLSGRQGTEGQVTDLEH--NQLEDDTVEKKVKATPSKFDKEKAFL 574
P+ ++ + + R +G +D ++ +++ + + V D +F
Sbjct: 290 THIKPDV----VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 575 REPETRRVTRD 585
R + +R+ RD
Sbjct: 346 RWSDAQRLLRD 356
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 186/379 (49%), Gaps = 20/379 (5%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G V ++++I+ L + A L+ M G G +VT T+ + C + D
Sbjct: 221 GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI---VNGMCKMGDT 277
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNI 285
A+N + + + + ++ LC+ + DA++L K + P + ++N
Sbjct: 278 KSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP-NVFTYNC 336
Query: 286 ILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNK 345
+++G+C+ +A+R+ +M +R I DV+++ +++S K KL++ +L D+M ++
Sbjct: 337 MIDGFCSF-GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 395
Query: 346 KITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEA 405
I PD YN++I+ K +A ++ M +PDVVT+N++I C+ +++DE
Sbjct: 396 CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEG 451
Query: 406 KEVFNDMMKRNITPTIRTF----HAFFRI--LRVEEEVFELLDKMRELGCYPTIETYIML 459
++ ++ +R + T+ H F + L +++F+ +M G P T +L
Sbjct: 452 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ---EMISHGVCPDTITCNIL 508
Query: 460 IRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGF 519
+ FC KL+E +++ +++ + D +Y ++IHG+ KV EA D + + G
Sbjct: 509 LYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 568
Query: 520 LPEPKTEQMLQAWLSGRQG 538
P+ +T ++ + G+
Sbjct: 569 EPDVQTYNVMISGFCGKSA 587
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 155/365 (42%), Gaps = 53/365 (14%)
Query: 216 IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL------ 269
I+I+ +C + +++TF + GFQ + F LL LC + +A L
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 270 -----------FCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVS 318
+ P+ I +FN ++NG C L EA + ++M +G+ DVV+
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVI-TFNTLINGLC-LEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 319 YASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTME 378
Y +I++ K L +M+ I PD +Y+A+I L K +A L M
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 379 KNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVF 438
+ + P+V TYN +I C + +A+ + DM++R I P + TF+A E ++F
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 439 E---LLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMM---------------- 479
E L D+M +P TY +I FC+ + D+ ++++M
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYC 443
Query: 480 ---RED------------GVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPK 524
R D G+ + ++Y LIHG + A D + EM G P+
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 503
Query: 525 TEQML 529
T +L
Sbjct: 504 TCNIL 508
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 127/293 (43%), Gaps = 33/293 (11%)
Query: 249 FQGLLSALCRYKNVQDAEHLLF-CNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEM 307
F ++ CR K V + LL ++ ++N +++G+C + + A+ ++ EM
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE-VDNLNAAQDLFQEM 493
Query: 308 SKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLV 367
G+ D ++ ++ + ++ KL + +LF+ ++ KI D YN +IH + KG V
Sbjct: 494 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 553
Query: 368 KEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAF 427
EA +L ++ + V PDV TYN +I C I +A +F+ M P T++
Sbjct: 554 DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 613
Query: 428 FR-ILRVEE--EVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGV 484
R L+ E + EL+ +MR G T M CR +E+ I N +R
Sbjct: 614 IRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSD-EEI--IENYLRPK-- 668
Query: 485 SHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQ 537
+NG+ Y +E+ + + EP WL RQ
Sbjct: 669 ---------------INGETSSIPRYVVELAEELYTVEP--------WLLPRQ 698
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 116/267 (43%), Gaps = 19/267 (7%)
Query: 277 PLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMS--C--------- 325
PL I SFNI++ +C+ + + +++K G Q DVV++ +++ C
Sbjct: 138 PLNIYSFNILIKCFCDC-HKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 326 ----YSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNN 381
Y + + LFDQM +TP +N +I+ L V EA L+ M
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 382 VTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVF 438
+ DVVTY +++ +CK A + + M + +I P + + A L + +
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 439 ELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGL 498
L +M E G P + TY +I FC + + + ++ M E ++ D ++ LI
Sbjct: 317 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISAS 376
Query: 499 FLNGKVKEAHDYYIEMQRKGFLPEPKT 525
GK+ EA EM + P+ T
Sbjct: 377 VKEGKLFEAEKLCDEMLHRCIFPDTVT 403
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 104/244 (42%), Gaps = 18/244 (7%)
Query: 300 AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIH 359
A ++ +M R I ++ S+ ++ C+ KL F ++ PD +N ++H
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 360 ALAK-----------GRLVK----EAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDE 404
L G +V+ EAV L M + +TP V+T+N+LI LC ++ E
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 405 AKEVFNDMMKRNITPTIRTFHAFFR---ILRVEEEVFELLDKMRELGCYPTIETYIMLIR 461
A + N M+ + + + T+ + + LL KM E P + Y +I
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304
Query: 462 KFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
+ C+ + +++ M E G++ + +Y +I G G+ +A +M + P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364
Query: 522 EPKT 525
+ T
Sbjct: 365 DVLT 368
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 106/251 (42%), Gaps = 26/251 (10%)
Query: 337 QLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPL 396
L+ +M+ ++I + +N +I + +++ + K PDVVT+N+L+ L
Sbjct: 127 SLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGL 186
Query: 397 CKNRKID---------------EAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFE-- 439
C +I EA +F+ M++ +TP + TF+ L +E V E
Sbjct: 187 CLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA 246
Query: 440 -LLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGL 498
L++KM G + + TY ++ C+ + + M E + D Y +I L
Sbjct: 247 ALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306
Query: 499 FLNGKVKEAHDYYIEMQRKGFLPEPKTEQ-MLQAWLSGRQGTEGQVTDLEHNQLEDDTVE 557
+G +A + EM KG P T M+ + S + ++ Q +L D +E
Sbjct: 307 CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ-------RLLRDMIE 359
Query: 558 KKVKATPSKFD 568
+++ F+
Sbjct: 360 REINPDVLTFN 370
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 104/251 (41%), Gaps = 24/251 (9%)
Query: 355 NAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMK 414
N VI + A++L + ME + ++ ++N LIK C K+ + F + K
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 415 RNITPTIRTFHAFFRILRVEEEVFE------------------LLDKMRELGCYPTIETY 456
P + TF+ L +E+ + E L D+M E+G P + T+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 457 IMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQR 516
LI C ++ E + N M G+ D +Y +++G+ G K A + +M+
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 517 KGFLPEPKTEQMLQAWLSGRQGTEGQVTDLEH--NQLEDDTVEKKVKATPSKFDKEKAFL 574
P+ ++ + + R +G +D ++ +++ + + V D +F
Sbjct: 290 THIKPDV----VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 575 REPETRRVTRD 585
R + +R+ RD
Sbjct: 346 RWSDAQRLLRD 356
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 180/400 (45%), Gaps = 41/400 (10%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSL------------------- 208
GY V Y ++++ + + D W LIEVM+ G P+
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 335
Query: 209 -----------VTPQTLL--IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSA 255
+ P T++ +I +C D+ A FY + + ++S
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 256 LCRYKNVQDAE---HLLFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGI 312
C+ ++ +A H +FC K + P + +F ++NG+C ++A RV + M + G
Sbjct: 396 FCQIGDMVEAGKLFHEMFC-KGLEPDSV-TFTELINGYCK-AGHMKDAFRVHNHMIQAGC 452
Query: 313 QHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVN 372
+VV+Y +++ K L +L +M + P+ YN++++ L K ++EAV
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 373 LLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAF---FR 429
L+ E + D VTY +L+ CK+ ++D+A+E+ +M+ + + PTI TF+ F
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 430 ILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRS 489
+ + E+ +LL+ M G P T+ L++++C L I+ M GV D
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 490 SYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
+Y L+ G +KEA + EM+ KGF T +L
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 170/365 (46%), Gaps = 10/365 (2%)
Query: 166 QPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVR 225
+ G +V Y+ +I + ++ + A +L+ +M G P +++ T+ + YC
Sbjct: 239 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV---VNGYCRFG 295
Query: 226 DVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSF 283
++ + KR G + + ++ LCR + +AE + + P + +
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP-DTVVY 354
Query: 284 NIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMK 343
+++G+C R A + ++EM R I DV++Y +I+S + + + + +LF +M
Sbjct: 355 TTLIDGFCKR-GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 344 NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKID 403
K + PD + +I+ K +K+A + M + +P+VVTY +LI LCK +D
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 404 EAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIMLI 460
A E+ ++M K + P I T+++ L EE +L+ + G TY L+
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Query: 461 RKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFL 520
+C+ ++D+ +I M G+ ++ VL++G L+G +++ M KG
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 593
Query: 521 PEPKT 525
P T
Sbjct: 594 PNATT 598
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 159/346 (45%), Gaps = 15/346 (4%)
Query: 192 AWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQG 251
A + E M G S+ + L + K C AI F F G + +
Sbjct: 194 ARRVFEKMLNYGLVLSVDSCNVYLTRLSKDC--YKTATAIIVFREFPEVGVCWNVASYNI 251
Query: 252 LLSALCRYKNVQDAEHLLFCNK-NVFPLEIKSFNIILNGWCNLIVSAREAERVW---HEM 307
++ +C+ +++A HLL + + ++ S++ ++NG+C E ++VW M
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRF----GELDKVWKLIEVM 307
Query: 308 SKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLV 367
++G++ + Y SI+ + KL + + F +M + I PD VY +I K +
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 368 KEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTF--- 424
+ A M ++TPDV+TY ++I C+ + EA ++F++M + + P TF
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 425 -HAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDG 483
+ + + + ++ F + + M + GC P + TY LI C+ LD ++ + M + G
Sbjct: 428 INGYCKAGHM-KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 484 VSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
+ + +Y +++GL +G ++EA E + G + T L
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 161/382 (42%), Gaps = 36/382 (9%)
Query: 150 RNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLV 209
R D AA FF + V Y ++IS ++ A L M G P V
Sbjct: 364 RGDIRAASKFF-YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 422
Query: 210 TPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL 269
T L I YC + A + G + + L+ LC+ ++ A LL
Sbjct: 423 TFTEL---INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 270 F------CNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIM 323
N+F ++N I+NG C + EA ++ E G+ D V+Y ++M
Sbjct: 480 HEMWKIGLQPNIF-----TYNSIVNGLCK-SGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Query: 324 SCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVT 383
Y KS ++ K ++ +M K + P +N +++ ++++ LL M +
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 593
Query: 384 PDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFR---ILRVEEEVFEL 440
P+ T+NSL+K C + A ++ DM R + P +T+ + R +E + L
Sbjct: 594 PNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFL 653
Query: 441 LDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFL 500
+M+ G ++ TY +LI+ F + +K E ++++ MR +G++ D
Sbjct: 654 FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD------------- 700
Query: 501 NGKVKEAHDYYIEMQRKGFLPE 522
KE D++ + + KG P+
Sbjct: 701 ----KEIFDFFSDTKYKGKRPD 718
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 180/400 (45%), Gaps = 41/400 (10%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSL------------------- 208
GY V Y ++++ + + D W LIEVM+ G P+
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 335
Query: 209 -----------VTPQTLL--IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSA 255
+ P T++ +I +C D+ A FY + + ++S
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 256 LCRYKNVQDAE---HLLFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGI 312
C+ ++ +A H +FC K + P + +F ++NG+C ++A RV + M + G
Sbjct: 396 FCQIGDMVEAGKLFHEMFC-KGLEPDSV-TFTELINGYCK-AGHMKDAFRVHNHMIQAGC 452
Query: 313 QHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVN 372
+VV+Y +++ K L +L +M + P+ YN++++ L K ++EAV
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 373 LLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAF---FR 429
L+ E + D VTY +L+ CK+ ++D+A+E+ +M+ + + PTI TF+ F
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 430 ILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRS 489
+ + E+ +LL+ M G P T+ L++++C L I+ M GV D
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 490 SYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
+Y L+ G +KEA + EM+ KGF T +L
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 170/365 (46%), Gaps = 10/365 (2%)
Query: 166 QPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVR 225
+ G +V Y+ +I + ++ + A +L+ +M G P +++ T+ + YC
Sbjct: 239 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV---VNGYCRFG 295
Query: 226 DVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSF 283
++ + KR G + + ++ LCR + +AE + + P + +
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP-DTVVY 354
Query: 284 NIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMK 343
+++G+C R A + ++EM R I DV++Y +I+S + + + + +LF +M
Sbjct: 355 TTLIDGFCKR-GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 344 NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKID 403
K + PD + +I+ K +K+A + M + +P+VVTY +LI LCK +D
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 404 EAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIMLI 460
A E+ ++M K + P I T+++ L EE +L+ + G TY L+
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Query: 461 RKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFL 520
+C+ ++D+ +I M G+ ++ VL++G L+G +++ M KG
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 593
Query: 521 PEPKT 525
P T
Sbjct: 594 PNATT 598
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 159/346 (45%), Gaps = 15/346 (4%)
Query: 192 AWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQG 251
A + E M G S+ + L + K C AI F F G + +
Sbjct: 194 ARRVFEKMLNYGLVLSVDSCNVYLTRLSKDC--YKTATAIIVFREFPEVGVCWNVASYNI 251
Query: 252 LLSALCRYKNVQDAEHLLFCNK-NVFPLEIKSFNIILNGWCNLIVSAREAERVW---HEM 307
++ +C+ +++A HLL + + ++ S++ ++NG+C E ++VW M
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRF----GELDKVWKLIEVM 307
Query: 308 SKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLV 367
++G++ + Y SI+ + KL + + F +M + I PD VY +I K +
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 368 KEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTF--- 424
+ A M ++TPDV+TY ++I C+ + EA ++F++M + + P TF
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 425 -HAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDG 483
+ + + + ++ F + + M + GC P + TY LI C+ LD ++ + M + G
Sbjct: 428 INGYCKAGHM-KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 484 VSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
+ + +Y +++GL +G ++EA E + G + T L
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 161/382 (42%), Gaps = 36/382 (9%)
Query: 150 RNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLV 209
R D AA FF + V Y ++IS ++ A L M G P V
Sbjct: 364 RGDIRAASKFF-YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 422
Query: 210 TPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL 269
T L I YC + A + G + + L+ LC+ ++ A LL
Sbjct: 423 TFTEL---INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 270 F------CNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIM 323
N+F ++N I+NG C + EA ++ E G+ D V+Y ++M
Sbjct: 480 HEMWKIGLQPNIF-----TYNSIVNGLCK-SGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Query: 324 SCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVT 383
Y KS ++ K ++ +M K + P +N +++ ++++ LL M +
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 593
Query: 384 PDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFR---ILRVEEEVFEL 440
P+ T+NSL+K C + A ++ DM R + P +T+ + R +E + L
Sbjct: 594 PNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFL 653
Query: 441 LDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFL 500
+M+ G ++ TY +LI+ F + +K E ++++ MR +G++ D
Sbjct: 654 FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD------------- 700
Query: 501 NGKVKEAHDYYIEMQRKGFLPE 522
KE D++ + + KG P+
Sbjct: 701 ----KEIFDFFSDTKYKGKRPD 718
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 177/411 (43%), Gaps = 49/411 (11%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
+V ++ + S + K +++D L + M G +L TL IMI +C R + A
Sbjct: 87 TVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNL---YTLSIMINCFCRCRKLCLAF 143
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNG 289
+ + G++ F L++ LC V +A L+ P ++ + N ++NG
Sbjct: 144 SAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP-DLITINTLVNG 202
Query: 290 WCNLIVSAREAERVW--HEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKI 347
C +S +EAE + +M + G Q + V+Y +++ KS + +L +M+ + I
Sbjct: 203 LC---LSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259
Query: 348 TPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKE 407
D Y+ +I L K + A NL ME +T +++TYN LI C + D+ +
Sbjct: 260 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 319
Query: 408 VFNDMMKRNITPTIRTFHAFFRI------LRVEEEVF----------------------- 438
+ DM+KR I P + TF LR EE+
Sbjct: 320 LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC 379
Query: 439 ---------ELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRS 489
+++D M GC P I T+ +LI +C+ ++D+ +++ M GV D
Sbjct: 380 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 439
Query: 490 SYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTE 540
+Y LI G GK+ A + + EM + P T ++L L +E
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESE 490
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 148/319 (46%), Gaps = 7/319 (2%)
Query: 216 IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNK 273
I+I C + A N F + G I + L+ C D LL +
Sbjct: 268 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 274 NVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLY 333
+ P + +F+++++ + REAE + EM RGI D ++Y S++ + K + L
Sbjct: 328 KINP-NVVTFSVLIDSFVKE-GKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 334 KVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLI 393
K Q+ D M +K P+ + +N +I+ K + + + L + M V D VTYN+LI
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 394 KPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL---RVEEEVFELLDKMRELGCY 450
+ C+ K++ AKE+F +M+ R + P I T+ L E+ E+ +K+ +
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 505
Query: 451 PTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDY 510
I Y ++I C K+D+ + ++ + GV +Y ++I GL G + EA
Sbjct: 506 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELL 565
Query: 511 YIEMQRKGFLPEPKTEQML 529
+ +M+ G P+ T +L
Sbjct: 566 FRKMEEDGHAPDGWTYNIL 584
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 109/238 (45%), Gaps = 3/238 (1%)
Query: 295 VSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVY 354
+ A +A ++ +M V+ ++ + S +K+ + V L QM+ K I +
Sbjct: 67 IKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTL 126
Query: 355 NAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMK 414
+ +I+ + R + A + + + K P+ +T+++LI LC ++ EA E+ + M++
Sbjct: 127 SIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 186
Query: 415 RNITPTIRTFHAFFRILRV---EEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDE 471
P + T + L + E E L+DKM E GC P TY ++ C+ +
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 246
Query: 472 VFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
++ M E + D Y ++I GL +G + A + + EM+ KG T +L
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNIL 304
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 109/262 (41%), Gaps = 38/262 (14%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G A Y S+I K D A ++++M G P++ +T I+I YC +
Sbjct: 363 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI---RTFNILINGYCKANRI 419
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIIL 287
+ F +G+++ + ++N ++
Sbjct: 420 DDGLELFRKM----------SLRGVVA------------------------DTVTYNTLI 445
Query: 288 NGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKI 347
G+C L A+ ++ EM R + ++V+Y ++ + + K ++F++++ K+
Sbjct: 446 QGFCEL-GKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 504
Query: 348 TPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKE 407
D +YN +IH + V +A +L ++ V P V TYN +I LCK + EA+
Sbjct: 505 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAEL 564
Query: 408 VFNDMMKRNITPTIRTFHAFFR 429
+F M + P T++ R
Sbjct: 565 LFRKMEEDGHAPDGWTYNILIR 586
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 5/143 (3%)
Query: 401 KIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEE---VFELLDKMRELGCYPTIETYI 457
K D+A ++F DM+ PT+ F F + ++ V L +M G + T
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 458 MLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRK 517
++I FCR RKL F + + G + ++ LI+GL L G+V EA + M
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 518 GFLPEPKTEQML--QAWLSGRQG 538
G P+ T L LSG++
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEA 210
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 174/401 (43%), Gaps = 47/401 (11%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G +H + + +I + + A +++ M G PS+VT +LL +C V +
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLL---HGFCLVNRI 157
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF-CNKNVFPLEIKSFNII 286
G A + + G++ + + L+ LC+ + A LL K ++ ++N +
Sbjct: 158 GDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTL 217
Query: 287 LNGWCNLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCYSKSS-------------- 330
L G C S R +A R+ +M KR I DVV++ +++ + K
Sbjct: 218 LTGLC---YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274
Query: 331 ---------------------KLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKE 369
+LY + FD M +K P+ YN +I K R+V E
Sbjct: 275 SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDE 334
Query: 370 AVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFR 429
+ L Q M D+ TYN+LI C+ K+ A ++F M+ R +TP I T
Sbjct: 335 GMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLH 394
Query: 430 ILRVEEEVFELL---DKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSH 486
L V E+ L D MRE Y I Y ++I C+ K+++ ++++ + +GV
Sbjct: 395 GLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKP 454
Query: 487 DRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQ 527
D +Y ++I GL NG +EA + M+ +G + + E
Sbjct: 455 DARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAED 495
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 170/381 (44%), Gaps = 44/381 (11%)
Query: 153 WEAAFT-FFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTP 211
+E AF FF QP S+ ++ +++ +R+++T + M G L
Sbjct: 52 FEDAFALFFEMVHSQP--LPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDL--- 106
Query: 212 QTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFC 271
+ I+I +C + A++ + G++ I F LL C + DA L
Sbjct: 107 YSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSL--- 163
Query: 272 NKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSK 331
+IL M K G + +VV Y +++ K+ +
Sbjct: 164 -------------VIL-------------------MVKSGYEPNVVVYNTLIDGLCKNGE 191
Query: 332 LYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNS 391
L +L ++M+ K + D YN ++ L +A +L+ M K ++ PDVVT+ +
Sbjct: 192 LNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTA 251
Query: 392 LIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFE---LLDKMRELG 448
LI K +DEA+E++ +M++ ++ P T+++ L + +++ D M G
Sbjct: 252 LIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKG 311
Query: 449 CYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAH 508
C+P + TY LI FC++R +DE K++ M +G + D +Y LIHG GK++ A
Sbjct: 312 CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVAL 371
Query: 509 DYYIEMQRKGFLPEPKTEQML 529
D + M + P+ T +L
Sbjct: 372 DIFCWMVSRRVTPDIITHCIL 392
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 180/399 (45%), Gaps = 47/399 (11%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
S+ E+ ++S + KM KFD + E M G +L T I+I +C + A+
Sbjct: 77 SIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN---ILINCFCRCSRLSLAL 133
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNV---FPLEIKSFNIILN 288
+ G++ I LL+ C + DA L+ ++ V + + +F +++
Sbjct: 134 ALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALV--DQMVEMGYKPDTVTFTTLIH 191
Query: 289 GWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKIT 348
G L A EA + M +RG Q D+V+Y ++++ K L ++M+ KI
Sbjct: 192 GL-FLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIE 250
Query: 349 PDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEV 408
+ +Y+ VI +L K R +A+NL ME V P+V+TY+SLI LC + +A +
Sbjct: 251 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRL 310
Query: 409 FNDMMKRNITPTIRTFHAFF-------RILRVE---EEV------------------FEL 440
+DM++R I P + TF A ++++ E EE+ F +
Sbjct: 311 LSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCM 370
Query: 441 LDKMREL----------GCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSS 490
LD++ E C P + TY LI FC+ +++D+ +++ M + G+ + +
Sbjct: 371 LDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVT 430
Query: 491 YIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
Y LIHG F A + +M G P T +L
Sbjct: 431 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 469
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 175/355 (49%), Gaps = 16/355 (4%)
Query: 166 QPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVR 225
+ GY + ++I L K A LI+ M G P LVT + + C
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAV---VNGLCKRG 232
Query: 226 DVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSF 283
D A+N + + + + ++ +LC+Y++ DA +L NK V P + ++
Sbjct: 233 DTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP-NVITY 291
Query: 284 NIILNGWCNLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQ 341
+ +++ CN R +A R+ +M +R I ++V++++++ + K KL K +L+++
Sbjct: 292 SSLISCLCNY---GRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEE 348
Query: 342 MKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRK 401
M + I P+ Y+++I+ + EA +L+ M + + P+VVTYN+LI CK ++
Sbjct: 349 MIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKR 408
Query: 402 IDEAKEVFNDMMKRNITPTIRTF----HAFFRILRVEEEVFELLDKMRELGCYPTIETYI 457
+D+ E+F +M +R + T+ H FF+ R + + +M +G +P I TY
Sbjct: 409 VDKGMELFREMSQRGLVGNTVTYTTLIHGFFQA-RDCDNAQMVFKQMVSVGVHPNILTYN 467
Query: 458 MLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYI 512
+L+ C+ KL + ++ ++ + D +Y ++I G+ GK K Y++
Sbjct: 468 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYFV 522
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 5/205 (2%)
Query: 367 VKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHA 426
+ +A+ L M ++ P ++ ++ L+ + K K D M I+ + T++
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 427 FFRIL---RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDG 483
LL KM +LG P I T L+ FC ++ + + + M E G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 484 VSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQV 543
D ++ LIHGLFL+ K EA M ++G P+ T + L R T+ +
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 544 TDLEHNQLEDDTVEKKVKATPSKFD 568
L N++E +E V + D
Sbjct: 239 NLL--NKMEAAKIEANVVIYSTVID 261
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 169/363 (46%), Gaps = 12/363 (3%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G+ S+ S+++ + +F A +L++ M G G P++V T+ I C RD+
Sbjct: 144 GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTV---INGLCKNRDL 200
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIIL 287
A+ FY ++ G + + L+S L DA LL +++ +I I
Sbjct: 201 NNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL---RDMVKRKIDPNVIFF 257
Query: 288 NGWCNLIV---SAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKN 344
+ V + EA ++ EM +R + +V +Y S+++ + L +FD M +
Sbjct: 258 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 317
Query: 345 KKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDE 404
K PD YN +I K + V++ + L M + D TYN+LI C+ K++
Sbjct: 318 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 377
Query: 405 AKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIMLIR 461
A++VFN M+ ++P I T++ L E+ +++ +++ I TY ++I+
Sbjct: 378 AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQ 437
Query: 462 KFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
CR KL E + ++ + GV D +YI +I GL G +EA M+ GF+P
Sbjct: 438 GLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 497
Query: 522 EPK 524
+
Sbjct: 498 SER 500
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 166/341 (48%), Gaps = 10/341 (2%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
S+ ++ +++++ KM KFD L M G L + I+I +C + A+
Sbjct: 78 SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDL---YSFTILIHCFCRCSRLSLAL 134
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNV-FPLEIKSFNIILNGW 290
+ GF+ I LL+ C+ Q+A L+ F + +N ++NG
Sbjct: 135 ALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGL 194
Query: 291 CNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPD 350
C A V++ M K+GI+ D V+Y +++S S S + +L M +KI P+
Sbjct: 195 CK-NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPN 253
Query: 351 RKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFN 410
+ A+I K + EA NL + M + +V P+V TYNSLI C + + +AK +F+
Sbjct: 254 VIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFD 313
Query: 411 DMMKRNITPTIRTFH----AFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRW 466
M+ + P + T++ F + RVE+ + +L +M G TY LI +C+
Sbjct: 314 LMVSKGCFPDVVTYNTLITGFCKSKRVEDGM-KLFCEMTYQGLVGDAFTYNTLIHGYCQA 372
Query: 467 RKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEA 507
KL+ K++N M + GVS D +Y +L+ L NGK+++A
Sbjct: 373 GKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 413
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 132/334 (39%), Gaps = 76/334 (22%)
Query: 303 VWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALA 362
++H+M GI HD+ S+ ++ C+ + S+L L +M P ++++
Sbjct: 101 LYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFC 160
Query: 363 KGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVF------------- 409
+G +EAV+L+ +M+ P+VV YN++I LCKNR ++ A EVF
Sbjct: 161 QGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV 220
Query: 410 ----------------------NDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMREL 447
DM+KR I P + F A E + E + +E+
Sbjct: 221 TYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM 280
Query: 448 --------------------------------------GCYPTIETYIMLIRKFCRWRKL 469
GC+P + TY LI FC+ +++
Sbjct: 281 IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 340
Query: 470 DEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
++ K++ M G+ D +Y LIHG GK+ A + M G P+ T +L
Sbjct: 341 EDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 400
Query: 530 QAWLSGRQGTEG---QVTDLEHNQLEDDTVEKKV 560
L E V DL+ ++++ D + +
Sbjct: 401 LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 152/312 (48%), Gaps = 15/312 (4%)
Query: 152 DWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTP 211
D A F K+ A +V Y+++IS L ++ A L+ M P+++
Sbjct: 199 DLNNALEVFYCMEKKGIRADAV-TYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 257
Query: 212 QTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHL--L 269
L I + ++ A N + R + + L++ C + + DA+++ L
Sbjct: 258 TAL---IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDL 314
Query: 270 FCNKNVFPLEIKSFNIILNGWCNLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCYS 327
+K FP ++ ++N ++ G+C S R + +++ EM+ +G+ D +Y +++ Y
Sbjct: 315 MVSKGCFP-DVVTYNTLITGFCK---SKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYC 370
Query: 328 KSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVV 387
++ KL ++F++M + ++PD YN ++ L +++A+ +++ ++K+ + D++
Sbjct: 371 QAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDII 430
Query: 388 TYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL---RVEEEVFELLDKM 444
TYN +I+ LC+ K+ EA +F + ++ + P + L ++ E +L +M
Sbjct: 431 TYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRM 490
Query: 445 RELGCYPTIETY 456
+E G P+ Y
Sbjct: 491 KEDGFMPSERIY 502
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 188/414 (45%), Gaps = 64/414 (15%)
Query: 155 AAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTL 214
AAF F A + PGYAHS YH ++ L + R + ++E++R +
Sbjct: 25 AAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIR---SQECKCDEDVA 81
Query: 215 LIMIRKYCAVRDVGRAINTFYAFKR-FGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FC 271
L +I+ Y +A++ F + FG + I + LL+A K E L F
Sbjct: 82 LSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFE 141
Query: 272 NKNVFPLEIKSFNIILNGWCNLIVSAREAERV-----WHEMSKRGIQHDVVSYASIMSCY 326
V P ++++N+++ C +E E+ W M K G + DV SY+++++
Sbjct: 142 TAGVAP-NLQTYNVLIKMSC----KKKEFEKARGFLDW--MWKEGFKPDVFSYSTVINDL 194
Query: 327 SKSSKLYKVFQLFDQMKNKKITPDRKVYNAV----------------------------- 357
+K+ KL +LFD+M + + PD YN +
Sbjct: 195 AKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPN 254
Query: 358 -------IHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFN 410
I L+K V + + + + M++N D+ TY+SLI LC +D+A+ VFN
Sbjct: 255 VKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFN 314
Query: 411 DMMKRNITPTIRTFH----AFFRILRVEE--EVFELLDKMRELGCYPTIETYIMLIRKFC 464
++ +R + + T++ F R +++E E++ +++ + I +Y +LI+
Sbjct: 315 ELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV----NIVSYNILIKGLL 370
Query: 465 RWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKG 518
K+DE IW +M G + D+++Y + IHGL +NG V +A E++ G
Sbjct: 371 ENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSG 424
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 179/434 (41%), Gaps = 46/434 (10%)
Query: 150 RNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLV 209
+ ++E A F W K+ G+ V Y ++I+ L K K D A L + M G P +
Sbjct: 162 KKEFEKARGFLDWMWKE-GFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVT 220
Query: 210 TPQTLL---------------------------------IMIRKYCAVRDVGRAINTFYA 236
L+ IMI V + +
Sbjct: 221 CYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWER 280
Query: 237 FKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF-CNKNVFPLEIKSFNIILNGWCNLIV 295
K+ + + + L+ LC NV AE + ++ +++ ++N +L G+C
Sbjct: 281 MKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCR-CG 339
Query: 296 SAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYN 355
+E+ +W M + ++VSY ++ ++ K+ + ++ M K D+ Y
Sbjct: 340 KIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYG 398
Query: 356 AVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKR 415
IH L V +A+ ++Q +E + DV Y S+I LCK ++++EA + +M K
Sbjct: 399 IFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKH 458
Query: 416 NITPTIRTFHA----FFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDE 471
+ +A R R+ E F L +M + GC PT+ +Y +LI C+ K E
Sbjct: 459 GVELNSHVCNALIGGLIRDSRLGEASF-FLREMGKNGCRPTVVSYNILICGLCKAGKFGE 517
Query: 472 VFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQA 531
M E+G D +Y +L+ GL + K+ A + + + + G +T+ M+
Sbjct: 518 ASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGL----ETDVMMHN 573
Query: 532 WLSGRQGTEGQVTD 545
L + G++ D
Sbjct: 574 ILIHGLCSVGKLDD 587
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 151/383 (39%), Gaps = 75/383 (19%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
+V+ ++ MIS L K + D + E M+ L T +L I C +V +A
Sbjct: 254 NVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSL---IHGLCDAGNVDKAE 310
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIILNGWC 291
+ F + + + +L CR ++++ L ++ + I S+NI++ G
Sbjct: 311 SVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKG-- 368
Query: 292 NLIVSAR--EAERVW-----------------------------------HEMSKRGIQH 314
L+ + + EA +W E+ G
Sbjct: 369 -LLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHL 427
Query: 315 DVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLL 374
DV +YASI+ C K +L + L +M + + V NA+I L + + EA L
Sbjct: 428 DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFL 487
Query: 375 QTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE 434
+ M KN P VV+YN LI LCK K EA +M+
Sbjct: 488 REMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEML--------------------- 526
Query: 435 EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVL 494
E G P ++TY +L+ CR RK+D ++W+ + G+ D + +L
Sbjct: 527 -----------ENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNIL 575
Query: 495 IHGLFLNGKVKEAHDYYIEMQRK 517
IHGL GK+ +A M+ +
Sbjct: 576 IHGLCSVGKLDDAMTVMANMEHR 598
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 136/342 (39%), Gaps = 47/342 (13%)
Query: 161 LWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRK 220
LW + + ++ Y+ +I L + K D A + +M G T I I
Sbjct: 347 LWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAAD---KTTYGIFIHG 403
Query: 221 YCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL-FCNKNVFPLE 279
C V +A+ + G + + + ++ LC+ K +++A +L+ +K+ L
Sbjct: 404 LCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELN 463
Query: 280 IKSFNIILNGWCNLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQ 337
N ++ G LI +R EA EM K G + VVSY ++ K+ K +
Sbjct: 464 SHVCNALIGG---LIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASA 520
Query: 338 LFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLC 397
+M PD K Y+ ++ L + R + A+ L ++ + DV+ +N LI LC
Sbjct: 521 FVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLC 580
Query: 398 KNRKIDEAKEVFNDMMKRNITPTIRTFH----AFFRI----------------------- 430
K+D+A V +M RN T + T++ FF++
Sbjct: 581 SVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDII 640
Query: 431 -----------LRVEEEVFELLDKMRELGCYPTIETYIMLIR 461
R E D R G +PT+ T+ +L+R
Sbjct: 641 SYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVR 682
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 15/219 (6%)
Query: 149 IRNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSL 208
IR+ +FFL + G +V Y+ +I L K KF A ++ M G P L
Sbjct: 475 IRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDL 534
Query: 209 VTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHL 268
T LL + C R + A+ ++ F + G + + L+ LC + DA +
Sbjct: 535 KTYSILLCGL---CRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTV 591
Query: 269 LF------CNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASI 322
+ C N+ ++N ++ G+ + S R A +W M K G+Q D++SY +I
Sbjct: 592 MANMEHRNCTANLV-----TYNTLMEGFFKVGDSNR-ATVIWGYMYKMGLQPDIISYNTI 645
Query: 323 MSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHAL 361
M + + FD +N I P +N ++ A+
Sbjct: 646 MKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 165/363 (45%), Gaps = 9/363 (2%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G V ++ +I L + + A ++E M G P +T +++ Y D+
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPD---EKTFTTVMQGYIEEGDL 240
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNI 285
A+ FG ++ C+ V+DA + + N++ F + +FN
Sbjct: 241 DGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNT 300
Query: 286 ILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNK 345
++NG C + A + M + G DV +Y S++S K ++ + ++ DQM +
Sbjct: 301 LVNGLCK-AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR 359
Query: 346 KITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEA 405
+P+ YN +I L K V+EA L + + + PDV T+NSLI+ LC R A
Sbjct: 360 DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419
Query: 406 KEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIMLIRK 462
E+F +M + P T++ L + +E +L +M GC ++ TY LI
Sbjct: 420 MELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDG 479
Query: 463 FCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
FC+ K E +I++ M GVS + +Y LI GL + +V++A +M +G P+
Sbjct: 480 FCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPD 539
Query: 523 PKT 525
T
Sbjct: 540 KYT 542
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 170/368 (46%), Gaps = 53/368 (14%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y+++IS L K + + A L V+ G P + T +L I+ C R+ A+ F
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSL---IQGLCLTRNHRVAMELFE 424
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL------FCNKNVFPLEIKSFNIILNG 289
+ G + + L+ +LC + +A ++L C ++V ++N +++G
Sbjct: 425 EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI-----TYNTLIDG 479
Query: 290 WCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITP 349
+C REAE ++ EM G+ + V+Y +++ KS ++ QL DQM + P
Sbjct: 480 FCK-ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538
Query: 350 DRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVF 409
D+ YN+++ +G +K+A +++Q M N PD+VTY +LI LCK +++ A ++
Sbjct: 539 DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL 598
Query: 410 NDMMKR--NITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWR 467
+ + N+TP HA Y +I+ R R
Sbjct: 599 RSIQMKGINLTP-----HA-----------------------------YNPVIQGLFRKR 624
Query: 468 KLDEVFKIW-NMMREDGVSHDRSSYIVLIHGLF-LNGKVKEAHDYYIEMQRKGFLPEPKT 525
K E ++ M+ ++ D SY ++ GL G ++EA D+ +E+ KGF+PE +
Sbjct: 625 KTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSS 684
Query: 526 EQMLQAWL 533
ML L
Sbjct: 685 LYMLAEGL 692
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 184/391 (47%), Gaps = 25/391 (6%)
Query: 185 KMRKFDTAWNLIEVMRG-GGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQ 243
K + + A N I+ M G P T TL + C V AI + G+
Sbjct: 271 KEGRVEDALNFIQEMSNQDGFFPDQYTFNTL---VNGLCKAGHVKHAIEIMDVMLQEGYD 327
Query: 244 VGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWC--NLIVSARE 299
+ + ++S LC+ V++A +L ++ P + ++N +++ C N + A E
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV-TYNTLISTLCKENQVEEATE 386
Query: 300 AERVWHEMSKRGIQHDVVSYASIMS--CYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAV 357
RV ++ +GI DV ++ S++ C +++ ++ +LF++M++K PD YN +
Sbjct: 387 LARV---LTSKGILPDVCTFNSLIQGLCLTRNHRV--AMELFEEMRSKGCEPDEFTYNML 441
Query: 358 IHAL-AKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRN 416
I +L +KG+L EA+N+L+ ME + V+TYN+LI CK K EA+E+F++M
Sbjct: 442 IDSLCSKGKL-DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 417 ITPTIRTFHAFFRIL---RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVF 473
++ T++ L R E+ +L+D+M G P TY L+ FCR + +
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAA 560
Query: 474 KIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT-EQMLQAW 532
I M +G D +Y LI GL G+V+ A +Q KG P ++Q
Sbjct: 561 DIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGL 620
Query: 533 LSGRQGTEGQV---TDLEHNQLEDDTVEKKV 560
R+ TE LE N+ D V ++
Sbjct: 621 FRKRKTTEAINLFREMLEQNEAPPDAVSYRI 651
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 179/443 (40%), Gaps = 80/443 (18%)
Query: 152 DWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTP 211
D AA F A K+P ++ Y ++ LG+ FD ++E M+ + +
Sbjct: 62 DDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMK---SSRCEMGT 118
Query: 212 QTLLIMIRKYC--------------AVRDVGRAINT-FY--------------------- 235
T LI+I Y + + G +T FY
Sbjct: 119 STFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHA 178
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNG---- 289
+G + + F L+ ALCR ++ A +L + + P E K+F ++ G
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDE-KTFTTVMQGYIEE 237
Query: 290 -------------------WCNLIVS-----------AREAERVWHEMSKR-GIQHDVVS 318
W N+ V+ +A EMS + G D +
Sbjct: 238 GDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297
Query: 319 YASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTME 378
+ ++++ K+ + ++ D M + PD YN+VI L K VKEAV +L M
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI 357
Query: 379 KNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL---RVEE 435
+ +P+ VTYN+LI LCK +++EA E+ + + I P + TF++ + L R
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 436 EVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLI 495
EL ++MR GC P TY MLI C KLDE + M G + +Y LI
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Query: 496 HGLFLNGKVKEAHDYYIEMQRKG 518
G K +EA + + EM+ G
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHG 500
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 347 ITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAK 406
I PD +N +I AL + ++ A+ +L+ M + PD T+ ++++ + +D A
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGAL 244
Query: 407 EVFNDMMK-----RNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIR 461
+ M++ N++ + H F + RVE+ + + + + G +P T+ L+
Sbjct: 245 RIREQMVEFGCSWSNVSVNV-IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 462 KFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
C+ + +I ++M ++G D +Y +I GL G+VKEA + +M + P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 522 EPKTEQMLQAWLSGRQGTEGQVTDL 546
T L + L E + T+L
Sbjct: 364 NTVTYNTLISTLCKENQVE-EATEL 387
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 176/402 (43%), Gaps = 26/402 (6%)
Query: 150 RNDWEAAFTFFLWAGKQ-PGYAHSVREYHSMISILGKMRKFDTAWNLIEVM--RGGGTGP 206
RND F G P + H+ +MI IL + + A + + M R G +
Sbjct: 89 RNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRL 148
Query: 207 SLVTP------------QTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLS 254
+V ++IR Y R + A F + GF V ID L+
Sbjct: 149 EIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIG 208
Query: 255 ALCRYKNVQDAEHLLF-CNKNVFPLEIKSFNIILNGWCNLIVSAREAERV---WHEMSKR 310
+L R V+ A + +++ + + + NI++N C + E+V ++ ++
Sbjct: 209 SLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALC----KDGKMEKVGTFLSQVQEK 264
Query: 311 GIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEA 370
G+ D+V+Y +++S YS + + F+L + M K +P YN VI+ L K + A
Sbjct: 265 GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERA 324
Query: 371 VNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRI 430
+ M ++ ++PD TY SL+ CK + E ++VF+DM R++ P + F + +
Sbjct: 325 KEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSL 384
Query: 431 LRVE---EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHD 487
++ + ++E G P Y +LI+ +CR + + N M + G + D
Sbjct: 385 FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMD 444
Query: 488 RSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
+Y ++HGL + EA + EM + P+ T +L
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTIL 486
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 167/356 (46%), Gaps = 12/356 (3%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
+ SM+S+ + D A ++ G P V I+I+ YC + A+N
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI---YTILIQGYCRKGMISVAMNLRN 434
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCNL 293
+ G + + + +L LC+ K + +A+ L + +FP + + I+++G C L
Sbjct: 435 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFP-DSYTLTILIDGHCKL 493
Query: 294 IVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKV 353
+ + A ++ +M ++ I+ DVV+Y +++ + K + +++ M +K+I P
Sbjct: 494 -GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 552
Query: 354 YNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMM 413
Y+ +++AL + EA + M N+ P V+ NS+IK C++ + + M+
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 414 KRNITPTIRTFHAFFRILRVEE---EVFELLDKMRE--LGCYPTIETYIMLIRKFCRWRK 468
P +++ EE + F L+ KM E G P + TY ++ FCR +
Sbjct: 613 SEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ 672
Query: 469 LDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPK 524
+ E + M E GV+ DRS+Y +I+G + EA + EM ++GF P+ K
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDK 728
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 169/383 (44%), Gaps = 11/383 (2%)
Query: 166 QPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVR 225
+ G +V + M++ L K K + + ++ G P +VT TL I Y +
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTL---ISAYSSKG 284
Query: 226 DVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSF 283
+ A A GF G+ + +++ LC++ + A+ + + P + ++
Sbjct: 285 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP-DSTTY 343
Query: 284 NIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMK 343
+L C E E+V+ +M R + D+V ++S+MS +++S L K F+ +K
Sbjct: 344 RSLLMEACKK-GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 402
Query: 344 NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKID 403
+ PD +Y +I + ++ A+NL M + DVVTYN+++ LCK + +
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 462
Query: 404 EAKEVFNDMMKRNITPTIRTFHAFFR---ILRVEEEVFELLDKMRELGCYPTIETYIMLI 460
EA ++FN+M +R + P T L + EL KM+E + TY L+
Sbjct: 463 EADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Query: 461 RKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFL 520
F + +D +IW M + SY +L++ L G + EA + EM K
Sbjct: 523 DGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIK 582
Query: 521 PEPK-TEQMLQAWLSGRQGTEGQ 542
P M++ + ++G+
Sbjct: 583 PTVMICNSMIKGYCRSGNASDGE 605
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 180/409 (44%), Gaps = 51/409 (12%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVR-- 225
G + SV Y ++I+ G+ +++T+ L++ M+ PS++T T++ CA
Sbjct: 171 GVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVI----NACARGGL 226
Query: 226 DVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKN---VFP----- 277
D + F + G Q I + LLSA C + + D ++F N + P
Sbjct: 227 DWEGLLGLFAEMRHEGIQPDIVTYNTLLSA-CAIRGLGDEAEMVFRTMNDGGIVPDLTTY 285
Query: 278 -----------------------------LEIKSFNIILNGWCNLIVSAREAERVWHEMS 308
+I S+N++L + S +EA V+H+M
Sbjct: 286 SHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAK-SGSIKEAMGVFHQMQ 344
Query: 309 KRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVK 368
G + +Y+ +++ + +S + V QLF +MK+ PD YN +I +G K
Sbjct: 345 AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFK 404
Query: 369 EAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAF- 427
E V L M + N+ PD+ TY +I K ++A+++ M +I P+ + +
Sbjct: 405 EVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVI 464
Query: 428 --FRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVS 485
F + EE + M E+G P+IET+ L+ F R + E I + + + G+
Sbjct: 465 EAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIP 524
Query: 486 HDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLS 534
+R ++ I GK +EA Y++M++ P+ +T L+A LS
Sbjct: 525 RNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERT---LEAVLS 570
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 134/257 (52%), Gaps = 7/257 (2%)
Query: 303 VWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALA 362
V+ EM +G+ V SY ++++ Y ++ + +L D+MKN+KI+P YN VI+A A
Sbjct: 163 VFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACA 222
Query: 363 KGRLVKEA-VNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKI-DEAKEVFNDMMKRNITPT 420
+G L E + L M + PD+VTYN+L+ C R + DEA+ VF M I P
Sbjct: 223 RGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSA-CAIRGLGDEAEMVFRTMNDGGIVPD 281
Query: 421 IRTFHAF---FRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWN 477
+ T+ F LR E+V +LL +M G P I +Y +L+ + + + E +++
Sbjct: 282 LTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFH 341
Query: 478 MMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQ 537
M+ G + + ++Y VL++ +G+ + ++EM+ P+ T +L + G
Sbjct: 342 QMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIE-VFGEG 400
Query: 538 GTEGQVTDLEHNQLEDD 554
G +V L H+ +E++
Sbjct: 401 GYFKEVVTLFHDMVEEN 417
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 6/216 (2%)
Query: 319 YASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTME 378
Y ++S + L K ++FD+M ++ ++ Y A+I+A + + ++ LL M+
Sbjct: 144 YTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMK 203
Query: 379 KNNVTPDVVTYNSLIKPLCKNRKIDEAK--EVFNDMMKRNITPTIRTFHAFFRILRVE-- 434
++P ++TYN++I C +D +F +M I P I T++ +
Sbjct: 204 NEKISPSILTYNTVINA-CARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGL 262
Query: 435 -EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIV 493
+E + M + G P + TY L+ F + R+L++V + M G D +SY V
Sbjct: 263 GDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNV 322
Query: 494 LIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
L+ +G +KEA + +MQ G P T +L
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVL 358
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 146/364 (40%), Gaps = 55/364 (15%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G + Y ++ GK+R+ + +L+ M GG+ P + + LL K ++++
Sbjct: 277 GIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKE- 335
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNK--NVFPLEIKSFNI 285
A+ F+ + G + + LL+ + D L K N P + ++NI
Sbjct: 336 --AMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDP-DAATYNI 392
Query: 286 IL-----NGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFD 340
++ G+ +V+ ++H+M + I+ D+ +Y I+ K ++
Sbjct: 393 LIEVFGEGGYFKEVVT------LFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQ 446
Query: 341 QMKNKKITPDRKVYNAVIHAL-----------------------------------AKGR 365
M I P K Y VI A A+G
Sbjct: 447 YMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGG 506
Query: 366 LVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFH 425
LVKE+ +L + + + + T+N+ I+ + K +EA + + DM K P RT
Sbjct: 507 LVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLE 566
Query: 426 AFFRI---LRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMRED 482
A + R+ +E E ++M+ P+I Y M++ + + + D+V ++ M +
Sbjct: 567 AVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSN 626
Query: 483 GVSH 486
VS+
Sbjct: 627 RVSN 630
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/335 (15%), Positives = 131/335 (39%), Gaps = 42/335 (12%)
Query: 165 KQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAV 224
+ G + Y ++++ G+ ++D L M+ T P T L+ + +
Sbjct: 344 QAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYF 403
Query: 225 RDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--------------- 269
++V + F+ + ++ ++G++ A + +DA +L
Sbjct: 404 KEV---VTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAY 460
Query: 270 ------FCNKNVFPLEIKSFNII--------LNGWCNLIVS------AREAERVWHEMSK 309
F ++ + +FN + + + +L+ S +E+E + +
Sbjct: 461 TGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVD 520
Query: 310 RGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKE 369
GI + ++ + + Y + K + + + M+ + PD + AV+ + RLV E
Sbjct: 521 SGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDE 580
Query: 370 AVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFR 429
+ M+ +++ P ++ Y ++ K + D+ E+ +M+ ++ + +
Sbjct: 581 CREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIK 640
Query: 430 ILRVEEEVFEL----LDKMRELGCYPTIETYIMLI 460
++ +++ LDK+ GC I Y L+
Sbjct: 641 GDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALL 675
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 152/319 (47%), Gaps = 7/319 (2%)
Query: 216 IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNK 273
I+I C + A N F + GF+ I + L+ C D LL +
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311
Query: 274 NVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLY 333
+ P ++ +F+ +++ + REAE + EM +RGI D V+Y S++ + K ++L
Sbjct: 312 KITP-DVVAFSALIDCFVKE-GKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 334 KVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLI 393
K + D M +K P+ + +N +I+ K L+ + + L + M V D VTYN+LI
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 394 KPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL---RVEEEVFELLDKMRELGCY 450
+ C+ K++ AKE+F +M+ R + P I ++ L E+ E+ +K+ +
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Query: 451 PTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDY 510
I Y ++I C K+D+ + ++ + GV D +Y ++I GL G + EA
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLL 549
Query: 511 YIEMQRKGFLPEPKTEQML 529
+ +M+ G P T +L
Sbjct: 550 FRKMEEDGHSPNGCTYNIL 568
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 167/372 (44%), Gaps = 10/372 (2%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G AH++ MI+ + RK A++ + + G P VT TL I C V
Sbjct: 102 GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTL---INGLCLEGRV 158
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNI 285
A+ G + + L++ LC V DA L+ P E+ ++
Sbjct: 159 SEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEV-TYGP 217
Query: 286 ILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNK 345
+L C +A E + +M +R I+ D V Y+ I+ K L F LF++M+ K
Sbjct: 218 VLKVMCKSGQTALAME-LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 346 KITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEA 405
D +Y +I + LL+ M K +TPDVV +++LI K K+ EA
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 406 KEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFE---LLDKMRELGCYPTIETYIMLIRK 462
+E+ +M++R I+P T+ + E ++ + +LD M GC P I T+ +LI
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Query: 463 FCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
+C+ +D+ +++ M GV D +Y LI G GK++ A + + EM + P+
Sbjct: 397 YCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPD 456
Query: 523 PKTEQMLQAWLS 534
+ ++L L
Sbjct: 457 IVSYKILLDGLC 468
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 37/217 (17%)
Query: 249 FQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWC--NLIVSARE----- 299
+ L+ C+ + A H+L +K P I++FNI++NG+C NLI E
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGP-NIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 300 ---------------------------AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKL 332
A+ ++ EM R ++ D+VSY ++ + +
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEP 473
Query: 333 YKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSL 392
K ++F++++ K+ D +YN +IH + V +A +L ++ V PDV TYN +
Sbjct: 474 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIM 533
Query: 393 IKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFR 429
I LCK + EA +F M + +P T++ R
Sbjct: 534 IGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIR 570
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 114/231 (49%), Gaps = 5/231 (2%)
Query: 294 IVSAREAERV--WHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDR 351
IV +E + V + EM++ + ++ ++ + S +++ + V L QM+ K I +
Sbjct: 48 IVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNL 107
Query: 352 KVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFND 411
+ +I+ + R + A + + + K PD VT+++LI LC ++ EA E+ +
Sbjct: 108 YTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDR 167
Query: 412 MMKRNITPTIRTFHAFFRILRVEEEVFE---LLDKMRELGCYPTIETYIMLIRKFCRWRK 468
M++ PT+ T +A L + +V + L+D+M E G P TY +++ C+ +
Sbjct: 168 MVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 469 LDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGF 519
++ M E + D Y ++I GL +G + A + + EM+ KGF
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 278
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 98/223 (43%), Gaps = 3/223 (1%)
Query: 303 VWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALA 362
+ +M +GI H++ + + +++C + KL F ++ PD ++ +I+ L
Sbjct: 94 LCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLC 153
Query: 363 KGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIR 422
V EA+ L+ M + P ++T N+L+ LC N K+ +A + + M++ P
Sbjct: 154 LEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEV 213
Query: 423 TFHAFFRILRVEEE---VFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMM 479
T+ +++ + ELL KM E Y ++I C+ LD F ++N M
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273
Query: 480 REDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
G D Y LI G G+ + +M ++ P+
Sbjct: 274 EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 3/160 (1%)
Query: 369 EAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFF 428
+AV+L Q M ++ P ++ ++ L + + ++ D ++ M + I + T
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 429 RIL---RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVS 485
R F + K+ +LG P T+ LI C ++ E ++ + M E G
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 486 HDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT 525
+ L++GL LNGKV +A M GF P T
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVT 214
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
Query: 387 VTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEE---VFELLDK 443
V+Y ++ + K D+A ++F +M + P + F F ++ ++ V +L +
Sbjct: 38 VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97
Query: 444 MRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGK 503
M G + T ++I CR RKL F + + G D ++ LI+GL L G+
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 504 VKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTD 545
V EA + M G P T L A ++G G+V+D
Sbjct: 158 VSEALELVDRMVEMGHKPTLIT---LNALVNG-LCLNGKVSD 195
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 137/272 (50%), Gaps = 9/272 (3%)
Query: 276 FPLEIKSFNIILNGWCNLIVS--AREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLY 333
F + +S++I+++G LI + A E +++ M ++G D +Y ++ + K K+
Sbjct: 548 FVPDARSYSILIHG---LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVN 604
Query: 334 KVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLI 393
K +QL ++MK K P Y +VI LAK + EA L + + + +VV Y+SLI
Sbjct: 605 KAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLI 664
Query: 394 KPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELL---DKMRELGCY 450
K +IDEA + ++M++ +TP + T+++ L EE+ E L M+EL C
Sbjct: 665 DGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCT 724
Query: 451 PTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDY 510
P TY +LI C+ RK ++ F W M++ G+ SY +I GL G + EA
Sbjct: 725 PNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGAL 784
Query: 511 YIEMQRKGFLPEPKT-EQMLQAWLSGRQGTEG 541
+ + G +P+ M++ +G + +
Sbjct: 785 FDRFKANGGVPDSACYNAMIEGLSNGNRAMDA 816
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 177/399 (44%), Gaps = 38/399 (9%)
Query: 152 DWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTP 211
D A +F W ++ H Y+S++ ++ + R FD ++ M G GPS+ T
Sbjct: 77 DVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTC 136
Query: 212 QTLLI----------------MIRK----------------YCAVRDVGRAINTFYAFKR 239
+++ M+RK + AV + F +
Sbjct: 137 IEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQE 196
Query: 240 FGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNK-NVFPLEIKSFNIILNGWCNLIVSAR 298
G++ + F L+ + V A LL K + +I +N+ ++ + +
Sbjct: 197 LGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSF-GKVGKVD 255
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
A + +HE+ G++ D V+Y S++ K+++L + ++F+ ++ + P YN +I
Sbjct: 256 MAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMI 315
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
EA +LL+ P V+ YN ++ L K K+DEA +VF + MK++
Sbjct: 316 MGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEE-MKKDAA 374
Query: 419 PTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKI 475
P + T++ +L + FEL D M++ G +P + T +++ + C+ +KLDE +
Sbjct: 375 PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAM 434
Query: 476 WNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEM 514
+ M + D ++ LI GL G+V +A+ Y +M
Sbjct: 435 FEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKM 473
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 176/396 (44%), Gaps = 53/396 (13%)
Query: 170 AHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGR 229
A ++ Y+ +I +L + K DTA+ L + M+ G P++ +T+ IM+ + C + +
Sbjct: 374 APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNV---RTVNIMVDRLCKSQKLDE 430
Query: 230 AINTFYAFKRFGFQVGI-DE--FQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNII 286
A F + ++V DE F L+ L + V DA + + + + ++ +I+
Sbjct: 431 ACAMF---EEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVY---EKMLDSDCRTNSIV 484
Query: 287 LNGWC-NLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMK 343
N R + +++ +M + D+ + M C K+ + K +F+++K
Sbjct: 485 YTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIK 544
Query: 344 NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKID 403
++ PD + Y+ +IH L K E L +M++ D YN +I CK K++
Sbjct: 545 ARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVN 604
Query: 404 EAKEVFNDMMKRNITPTIRTFHAFF----RILRVEE------------------------ 435
+A ++ +M + PT+ T+ + +I R++E
Sbjct: 605 KAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLI 664
Query: 436 ----------EVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVS 485
E + +L+++ + G P + T+ L+ + +++E + M+E +
Sbjct: 665 DGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCT 724
Query: 486 HDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
++ +Y +LI+GL K +A ++ EMQ++G P
Sbjct: 725 PNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKP 760
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 160/403 (39%), Gaps = 80/403 (19%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTF- 234
Y+ I GK+ K D AW + G P VT + MI C + A+ F
Sbjct: 241 YNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS---MIGVLCKANRLDEAVEMFE 297
Query: 235 -----------YAFKR----FGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLE 279
YA+ +G DE LL Q A K P
Sbjct: 298 HLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER-------QRA-------KGSIP-S 342
Query: 280 IKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLF 339
+ ++N IL + EA +V+ EM K+ ++ +Y ++ ++ KL F+L
Sbjct: 343 VIAYNCILTCL-RKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELR 400
Query: 340 DQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKN 399
D M+ + P+ + N ++ L K + + EA + + M+ TPD +T+ SLI L K
Sbjct: 401 DSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKV 460
Query: 400 RKIDEAKEVFN-----------------------------------DMMKRNITPTIRTF 424
++D+A +V+ DM+ +N +P ++
Sbjct: 461 GRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLL 520
Query: 425 HAFFRILRVEEE------VFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNM 478
+ + + E +FE + R + P +Y +LI + +E ++++
Sbjct: 521 NTYMDCMFKAGEPEKGRAMFEEIKARRFV---PDARSYSILIHGLIKAGFANETYELFYS 577
Query: 479 MREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
M+E G D +Y ++I G GKV +A+ EM+ KGF P
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEP 620
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 137/320 (42%), Gaps = 10/320 (3%)
Query: 169 YAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVG 228
+ R Y +I L K + + L M+ G ++ + I+I +C V
Sbjct: 548 FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGC---VLDTRAYNIVIDGFCKCGKVN 604
Query: 229 RAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF--CNKNVFPLEIKSFNII 286
+A K GF+ + + ++ L + + +A ++LF L + ++ +
Sbjct: 605 KAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEA-YMLFEEAKSKRIELNVVIYSSL 663
Query: 287 LNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKK 346
++G+ + EA + E+ ++G+ ++ ++ S++ K+ ++ + F MK K
Sbjct: 664 IDGF-GKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 347 ITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAK 406
TP++ Y +I+ L K R +A Q M+K + P ++Y ++I L K I EA
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782
Query: 407 EVFNDMMKRNITPTIRTFHAFFRILRVEE---EVFELLDKMRELGCYPTIETYIMLIRKF 463
+F+ P ++A L + F L ++ R G +T ++L+
Sbjct: 783 ALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTL 842
Query: 464 CRWRKLDEVFKIWNMMREDG 483
+ L++ + ++RE G
Sbjct: 843 HKNDCLEQAAIVGAVLRETG 862
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 123/285 (43%), Gaps = 40/285 (14%)
Query: 160 FLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIR 219
++ K+ G R Y+ +I K K + A+ L+E M+ G P++VT +++ +
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633
Query: 220 K-------------------------YCAVRD----VGRAINTFYAFKRF---GFQVGID 247
K Y ++ D VGR + + G +
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLY 693
Query: 248 EFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIK----SFNIILNGWCNLIVSAREAERV 303
+ LL AL + + + +A L C +++ L+ ++ I++NG C + +A
Sbjct: 694 TWNSLLDALVKAEEINEA---LVCFQSMKELKCTPNQVTYGILINGLCK-VRKFNKAFVF 749
Query: 304 WHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAK 363
W EM K+G++ +SY +++S +K+ + + LFD+ K PD YNA+I L+
Sbjct: 750 WQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSN 809
Query: 364 GRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEV 408
G +A +L + + + T L+ L KN +++A V
Sbjct: 810 GNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIV 854
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 137/348 (39%), Gaps = 58/348 (16%)
Query: 191 TAWNLIEVMRGGGTGPSLVT----------PQTLLIMIRKYCAVRDVGRAINTFYAF-KR 239
T ++ V+ G GPS P+ ++ ++R+ ++DV RAI F + +R
Sbjct: 35 TVNDICNVLETGPWGPSAENTLSALSFKPQPEFVIGVLRR---LKDVNRAIEYFRWYERR 91
Query: 240 FGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIILNGWCNLIVSA-- 297
+ + LL + R +N + +L + + F +N +++
Sbjct: 92 TELPHCPESYNSLLLVMARCRNFDALDQILG------EMSVAGFGPSVNTCIEMVLGCVK 145
Query: 298 ----REAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKV 353
RE V M K + +Y +++ +S + + LF QM+ P +
Sbjct: 146 ANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHL 205
Query: 354 YNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMM 413
+ +I AK V A++LL M+ +++ D+V YN I K K+D A + F+++
Sbjct: 206 FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIE 265
Query: 414 KRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVF 473
+ P +EV TY +I C+ +LDE
Sbjct: 266 ANGLKP---------------DEV-----------------TYTSMIGVLCKANRLDEAV 293
Query: 474 KIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
+++ + ++ +Y +I G GK EA+ + KG +P
Sbjct: 294 EMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIP 341
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 78/198 (39%), Gaps = 3/198 (1%)
Query: 354 YNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMM 413
YN+++ +A+ R +L M P V T ++ K K+ E +V M
Sbjct: 101 YNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMR 160
Query: 414 KRNITPTIRTFHAF---FRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLD 470
K P + F + + + L +M+ELG PT+ + LIR F + ++D
Sbjct: 161 KFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVD 220
Query: 471 EVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQ 530
+ + M+ + D Y V I GKV A ++ E++ G P+ T +
Sbjct: 221 SALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMI 280
Query: 531 AWLSGRQGTEGQVTDLEH 548
L + V EH
Sbjct: 281 GVLCKANRLDEAVEMFEH 298
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 170/366 (46%), Gaps = 19/366 (5%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G V Y+ MIS K + + A ++++ M P +VT T+L R C +
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTIL---RSLCDSGKL 220
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNI 285
+A+ + + + L+ A CR V A LL ++ P ++ ++N+
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTP-DVVTYNV 279
Query: 286 ILNGWCNLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMK 343
++NG C R EA + ++M G Q +V+++ I+ + + +L M
Sbjct: 280 LVNGICK---EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336
Query: 344 NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKID 403
K +P +N +I+ L + L+ A+++L+ M ++ P+ ++YN L+ CK +K+D
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396
Query: 404 EAKEVFNDMMKRNITPTIRTFHAFFRIL----RVEEEVFELLDKMRELGCYPTIETYIML 459
A E M+ R P I T++ L +VE+ V E+L+++ GC P + TY +
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV-EILNQLSSKGCSPVLITYNTV 455
Query: 460 IRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGF 519
I + K + K+ + MR + D +Y L+ GL GKV EA ++ E +R G
Sbjct: 456 IDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGI 515
Query: 520 LPEPKT 525
P T
Sbjct: 516 RPNAVT 521
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 166/362 (45%), Gaps = 19/362 (5%)
Query: 183 LGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGF 242
LGK RK A ++E++ G G P ++T +MI YC ++ A++ R
Sbjct: 150 LGKTRK---AAKILEILEGSGAVPDVITYN---VMISGYCKAGEINNALSVL---DRMSV 200
Query: 243 QVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCNLIVSAREA 300
+ + +L +LC ++ A +L ++ +P ++ ++ I++ C A
Sbjct: 201 SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP-DVITYTILIEATCR-DSGVGHA 258
Query: 301 ERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHA 360
++ EM RG DVV+Y +++ K +L + + + M + P+ +N ++ +
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318
Query: 361 LAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPT 420
+ +A LL M + +P VVT+N LI LC+ + A ++ M + P
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378
Query: 421 IRTF----HAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIW 476
++ H F + +++ + E L++M GCYP I TY ++ C+ K+++ +I
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAI-EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 477 NMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGR 536
N + G S +Y +I GL GK +A EM+ K P+ T L LS R
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS-R 496
Query: 537 QG 538
+G
Sbjct: 497 EG 498
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 155/342 (45%), Gaps = 10/342 (2%)
Query: 192 AWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQG 251
A L++ MR G P +VT +++ C + AI G Q +
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYN---VLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314
Query: 252 LLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSK 309
+L ++C DAE LL K P + +FNI++N C + R + + +M +
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSP-SVVTFNILINFLCRKGLLGRAID-ILEKMPQ 372
Query: 310 RGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKE 369
G Q + +SY ++ + K K+ + + ++M ++ PD YN ++ AL K V++
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432
Query: 370 AVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFR 429
AV +L + +P ++TYN++I L K K +A ++ ++M +++ P T+ +
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Query: 430 ILRVE---EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSH 486
L E +E + + +G P T+ ++ C+ R+ D M G
Sbjct: 493 GLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKP 552
Query: 487 DRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQM 528
+ +SY +LI GL G KEA + E+ KG + + EQ+
Sbjct: 553 NETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQV 594
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 132/300 (44%), Gaps = 16/300 (5%)
Query: 252 LLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSK 309
L+ CR + A +L P ++ ++N++++G+C A E + +
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVP-DVITYNVMISGYCK----AGEINNALSVLDR 197
Query: 310 RGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKE 369
+ DVV+Y +I+ S KL + ++ D+M + PD Y +I A + V
Sbjct: 198 MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257
Query: 370 AVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFR 429
A+ LL M TPDVVTYN L+ +CK ++DEA + NDM P + T + R
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 430 ILRVEE---EVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSH 486
+ + +LL M G P++ T+ +LI CR L I M + G
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 487 DRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT-EQMLQAWLSGRQGTEGQVTD 545
+ SY L+HG K+ A +Y M +G P+ T ML A +G+V D
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCK-----DGKVED 432
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 125/251 (49%), Gaps = 7/251 (2%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
E + M G D++ +++ + + K K ++ + ++ PD YN +I
Sbjct: 120 EGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMI 179
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
K + A+++L M +V+PDVVTYN++++ LC + K+ +A EV + M++R+
Sbjct: 180 SGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY 236
Query: 419 PTIRTFHAFFRILRVEEEV---FELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKI 475
P + T+ + V +LLD+MR+ GC P + TY +L+ C+ +LDE K
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 476 WNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSG 535
N M G + ++ +++ + G+ +A +M RKGF P T +L +L
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC- 355
Query: 536 RQGTEGQVTDL 546
R+G G+ D+
Sbjct: 356 RKGLLGRAIDI 366
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 102/205 (49%), Gaps = 6/205 (2%)
Query: 328 KSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVV 387
++ +L + F+ + M PD +I + ++A +L+ +E + PDV+
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 388 TYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKM 444
TYN +I CK +I+ A V + M +++P + T++ R L ++ E+LD+M
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 445 RELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKV 504
+ CYP + TY +LI CR + K+ + MR+ G + D +Y VL++G+ G++
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 505 KEAHDYYIEMQRKGFLPEPKTEQML 529
EA + +M G P T ++
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNII 315
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 106/254 (41%), Gaps = 42/254 (16%)
Query: 166 QPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVR 225
Q G + Y+ ++ K +K D A +E M G P +VT T
Sbjct: 372 QHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT------------ 419
Query: 226 DVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSF 283
+L+ALC+ V+DA +L +K P+ I ++
Sbjct: 420 --------------------------MLTALCKDGKVEDAVEILNQLSSKGCSPVLI-TY 452
Query: 284 NIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMK 343
N +++G + + A ++ EM + ++ D ++Y+S++ S+ K+ + + F + +
Sbjct: 453 NTVIDGLAKAGKTGK-AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511
Query: 344 NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKID 403
I P+ +N+++ L K R A++ L M P+ +Y LI+ L
Sbjct: 512 RMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAK 571
Query: 404 EAKEVFNDMMKRNI 417
EA E+ N++ + +
Sbjct: 572 EALELLNELCNKGL 585
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 122/479 (25%), Positives = 198/479 (41%), Gaps = 78/479 (16%)
Query: 155 AAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTL 214
+ F W G Q GY HS Y +I LG +F T L+ M+ G +V ++L
Sbjct: 93 TSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEG----IVFKESL 148
Query: 215 LIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF---C 271
I I +RD +A F ++ + E + + S +K+ +L C
Sbjct: 149 FISI-----MRDYDKA-----GFPGQTTRLML-EMRNVYSCEPTFKSYNVVLEILVSGNC 197
Query: 272 NK---NVF--------PLEIKSFNIILNGWC--NLIVSAREAERVWHEMSKRGIQHDVVS 318
+K NVF P + +F +++ +C N I SA R +M+K G + V
Sbjct: 198 HKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLR---DMTKHGCVPNSVI 254
Query: 319 YASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTME 378
Y +++ SK +++ + QL ++M PD + +N VI L K + EA ++ M
Sbjct: 255 YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRML 314
Query: 379 KNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEE-- 436
PD +TY L+ LCK ++D AK++F + K I H F R+++
Sbjct: 315 IRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKA 374
Query: 437 ---------------------------------VFELLDKMRELGCYPTIETYIMLIRKF 463
E+L MR GC P + +Y +L+ F
Sbjct: 375 VLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGF 434
Query: 464 CRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEP 523
C+ K+DE + + N M DG+ + + LI ++ EA + + EM RKG P+
Sbjct: 435 CKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDV 494
Query: 524 KTEQMLQAWLSGRQGTEGQVTDLEHN--QLEDDTVEKKVKATPSKFDKEKAFLREPETR 580
T L + L +V +++H L D E V T + AFLR E +
Sbjct: 495 YTFNSLISGLC-------EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK 546
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 171/377 (45%), Gaps = 16/377 (4%)
Query: 151 NDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVT 210
N+ ++A + K +SV Y ++I L K + + A L+E M G P T
Sbjct: 231 NEIDSALSLLRDMTKHGCVPNSVI-YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAET 289
Query: 211 PQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF 270
+++ + K+ + + + +N GF + L++ LC+ V A+ L +
Sbjct: 290 FNDVILGLCKFDRINEAAKMVNRMLIR---GFAPDDITYGYLMNGLCKIGRVDAAKDLFY 346
Query: 271 CNKNVFPLEIKSFNIILNGWCNLIVSAR--EAERVWHEM-SKRGIQHDVVSYASIMSCYS 327
+ EI FN +++G+ + R +A+ V +M + GI DV +Y S++ Y
Sbjct: 347 ---RIPKPEIVIFNTLIHGF---VTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYW 400
Query: 328 KSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVV 387
K + ++ M+NK P+ Y ++ K + EA N+L M + + P+ V
Sbjct: 401 KEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTV 460
Query: 388 TYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMREL 447
+N LI CK +I EA E+F +M ++ P + TF++ L +E+ L +R++
Sbjct: 461 GFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 520
Query: 448 ---GCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKV 504
G TY LI F R ++ E K+ N M G D +Y LI GL G+V
Sbjct: 521 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV 580
Query: 505 KEAHDYYIEMQRKGFLP 521
+A + +M R G P
Sbjct: 581 DKARSLFEKMLRDGHAP 597
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 135/267 (50%), Gaps = 9/267 (3%)
Query: 271 CNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSS 330
C NV+ S+ I+++G+C L EA V +EMS G++ + V + ++S + K
Sbjct: 420 CKPNVY-----SYTILVDGFCKL-GKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEH 473
Query: 331 KLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYN 390
++ + ++F +M K PD +N++I L + +K A+ LL+ M V + VTYN
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 391 SLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFE---LLDKMREL 447
+LI + +I EA+++ N+M+ + T+++ + L EV + L +KM
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Query: 448 GCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEA 507
G P+ + +LI CR ++E + M G + D ++ LI+GL G++++
Sbjct: 594 GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653
Query: 508 HDYYIEMQRKGFLPEPKTEQMLQAWLS 534
+ ++Q +G P+ T L +WL
Sbjct: 654 LTMFRKLQAEGIPPDTVTFNTLMSWLC 680
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 141/312 (45%), Gaps = 12/312 (3%)
Query: 165 KQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAV 224
+ G +V Y ++ K+ K D A+N++ M G P+ V L I +C
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL---ISAFCKE 472
Query: 225 RDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFN 284
+ A+ F R G + + F L+S LC V + +H L+ +++ + +
Sbjct: 473 HRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE---VDEIKHALWLLRDMISEGVVANT 529
Query: 285 IILNGWCNLIV---SAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQ 341
+ N N + +EA ++ +EM +G D ++Y S++ ++ ++ K LF++
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEK 589
Query: 342 MKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRK 401
M P N +I+ L + +V+EAV + M TPD+VT+NSLI LC+ +
Sbjct: 590 MLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGR 649
Query: 402 IDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFE---LLDKMRELGCYPTIETYIM 458
I++ +F + I P TF+ L V++ LLD+ E G P T+ +
Sbjct: 650 IEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSI 709
Query: 459 LIRKFCRWRKLD 470
L++ LD
Sbjct: 710 LLQSIIPQETLD 721
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 157/345 (45%), Gaps = 10/345 (2%)
Query: 190 DTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEF 249
D L +++ G P + T +L I Y VG A+ + + G + + +
Sbjct: 371 DAKAVLSDMVTSYGIVPDVCTYNSL---IYGYWKEGLVGLALEVLHDMRNKGCKPNVYSY 427
Query: 250 QGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEM 307
L+ C+ + +A ++L + P + FN +++ +C EA ++ EM
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLKPNTV-GFNCLISAFCKE-HRIPEAVEIFREM 485
Query: 308 SKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLV 367
++G + DV ++ S++S + ++ L M ++ + + YN +I+A + +
Sbjct: 486 PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 545
Query: 368 KEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAF 427
KEA L+ M D +TYNSLIK LC+ ++D+A+ +F M++ P+ + +
Sbjct: 546 KEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNIL 605
Query: 428 FRIL---RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGV 484
L + EE E +M G P I T+ LI CR ++++ ++ ++ +G+
Sbjct: 606 INGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665
Query: 485 SHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
D ++ L+ L G V +A E GF+P +T +L
Sbjct: 666 PPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSIL 710
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 188/436 (43%), Gaps = 71/436 (16%)
Query: 149 IRNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLI-EVMRGGGTG-P 206
I+ D+ + FF WA + +HS+ + ++ L K RKF +A +++ +V+ GG P
Sbjct: 91 IQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLP 150
Query: 207 SLV-------------TPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLL 253
+ V TP+ + + + ++ A +TF K +GF ++ +
Sbjct: 151 AKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYM 210
Query: 254 SAL-----------------------------------CRYKNV-------QDAEHLLFC 271
S+L CR + QD E L F
Sbjct: 211 SSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFR 270
Query: 272 NKNVFPLEIKSFNIILNGWC--NLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKS 329
+V S+N ++ G C L+ SA + + + M K G+Q +VV++ +++ + ++
Sbjct: 271 ATDV------SYNTLIAGHCEKGLLSSALKLKNM---MGKSGLQPNVVTFNTLIHGFCRA 321
Query: 330 SKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTY 389
KL + ++F +MK + P+ YN +I+ ++ + A + M N + D++TY
Sbjct: 322 MKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTY 381
Query: 390 NSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFR---ILRVEEEVFELLDKMRE 446
N+LI LCK K +A + ++ K N+ P TF A + + + FEL M
Sbjct: 382 NALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIR 441
Query: 447 LGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKE 506
GC+P +T+ ML+ FCR D ++ M + D + + +GL GK +
Sbjct: 442 SGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQL 501
Query: 507 AHDYYIEMQRKGFLPE 522
EM+ K FL E
Sbjct: 502 VKKLLQEMEGKKFLQE 517
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 7/186 (3%)
Query: 348 TPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKE 407
TP +V++++ A + + A + M+ P V + N+ + L ++D A
Sbjct: 167 TP--RVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALR 224
Query: 408 VFNDMMKRNITPTIRTFH----AFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKF 463
+ +M + I+P T + + R ++++ + ELL M LG T +Y LI
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGI-ELLQDMERLGFRATDVSYNTLIAGH 283
Query: 464 CRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEP 523
C L K+ NMM + G+ + ++ LIHG K++EA + EM+ P
Sbjct: 284 CEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNT 343
Query: 524 KTEQML 529
T L
Sbjct: 344 VTYNTL 349
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 188/436 (43%), Gaps = 71/436 (16%)
Query: 149 IRNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLI-EVMRGGGTG-P 206
I+ D+ + FF WA + +HS+ + ++ L K RKF +A +++ +V+ GG P
Sbjct: 91 IQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLP 150
Query: 207 SLV-------------TPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLL 253
+ V TP+ + + + ++ A +TF K +GF ++ +
Sbjct: 151 AKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYM 210
Query: 254 SAL-----------------------------------CRYKNV-------QDAEHLLFC 271
S+L CR + QD E L F
Sbjct: 211 SSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFR 270
Query: 272 NKNVFPLEIKSFNIILNGWC--NLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKS 329
+V S+N ++ G C L+ SA + + + M K G+Q +VV++ +++ + ++
Sbjct: 271 ATDV------SYNTLIAGHCEKGLLSSALKLKNM---MGKSGLQPNVVTFNTLIHGFCRA 321
Query: 330 SKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTY 389
KL + ++F +MK + P+ YN +I+ ++ + A + M N + D++TY
Sbjct: 322 MKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTY 381
Query: 390 NSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFR---ILRVEEEVFELLDKMRE 446
N+LI LCK K +A + ++ K N+ P TF A + + + FEL M
Sbjct: 382 NALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIR 441
Query: 447 LGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKE 506
GC+P +T+ ML+ FCR D ++ M + D + + +GL GK +
Sbjct: 442 SGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQL 501
Query: 507 AHDYYIEMQRKGFLPE 522
EM+ K FL E
Sbjct: 502 VKKLLQEMEGKKFLQE 517
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 7/186 (3%)
Query: 348 TPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKE 407
TP +V++++ A + + A + M+ P V + N+ + L ++D A
Sbjct: 167 TP--RVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALR 224
Query: 408 VFNDMMKRNITPTIRTFH----AFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKF 463
+ +M + I+P T + + R ++++ + ELL M LG T +Y LI
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGI-ELLQDMERLGFRATDVSYNTLIAGH 283
Query: 464 CRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEP 523
C L K+ NMM + G+ + ++ LIHG K++EA + EM+ P
Sbjct: 284 CEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNT 343
Query: 524 KTEQML 529
T L
Sbjct: 344 VTYNTL 349
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 142/294 (48%), Gaps = 27/294 (9%)
Query: 249 FQGLLSALCRYKNVQDAEHLLFCNKNV---FPLEIKSFNIILNGWCNLIVSAREAER--- 302
+ GLL CR +++A L C + V L++ + ++++G S + +R
Sbjct: 615 YTGLLHGFCREGKLEEA--LSVCQEMVQRGVDLDLVCYGVLIDG------SLKHKDRKLF 666
Query: 303 --VWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHA 360
+ EM RG++ D V Y S++ SK+ + F ++D M N+ P+ Y AVI+
Sbjct: 667 FGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVING 726
Query: 361 LAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNR-KIDEAKEVFNDMMKRNITP 419
L K V EA L M+ + P+ VTY + L K + +A E+ N ++K +
Sbjct: 727 LCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLAN 786
Query: 420 T------IRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVF 473
T IR F RI EE EL+ +M G P TY +I + CR + +
Sbjct: 787 TATYNMLIRGFCRQGRI----EEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAI 842
Query: 474 KIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQ 527
++WN M E G+ DR +Y LIHG + G++ +A + EM R+G +P KT +
Sbjct: 843 ELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSR 896
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 155/356 (43%), Gaps = 23/356 (6%)
Query: 169 YAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVG 228
++ S S++ L K K + A NL++ + G P+L L I C R
Sbjct: 328 FSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNAL---IDSLCKGRKFH 384
Query: 229 RAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNV---FPLEIKSFNI 285
A F + G + + L+ CR + A L F + V L + +N
Sbjct: 385 EAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA--LSFLGEMVDTGLKLSVYPYNS 442
Query: 286 ILNGWCNL-IVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKN 344
++NG C +SA AE EM + ++ VV+Y S+M Y K+ K +L+ +M
Sbjct: 443 LINGHCKFGDISA--AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 500
Query: 345 KKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDE 404
K I P + ++ L + L+++AV L M + NV P+ VTYN +I+ C+ + +
Sbjct: 501 KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSK 560
Query: 405 AKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFE---LLDKMRELGCYPTIETYIMLIR 461
A E +M ++ I P ++ L + + E +D + + C Y L+
Sbjct: 561 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLH 620
Query: 462 KFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHG--------LFLNGKVKEAHD 509
FCR KL+E + M + GV D Y VLI G LF G +KE HD
Sbjct: 621 GFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF-GLLKEMHD 675
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 150/337 (44%), Gaps = 27/337 (8%)
Query: 212 QTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF- 270
+TL ++ R G A+ F G + + + G++ +LC K++ A+ ++
Sbjct: 193 RTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAH 252
Query: 271 -----CNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWH------EMSKRGIQHDVVSY 319
C+ N+ P +N++++G C + ++VW +++ + ++ DVV+Y
Sbjct: 253 MEATGCDVNIVP-----YNVLIDGLC-------KKQKVWEAVGIKKDLAGKDLKPDVVTY 300
Query: 320 ASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEK 379
+++ K + ++ D+M + +P ++++ L K ++EA+NL++ +
Sbjct: 301 CTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVD 360
Query: 380 NNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EE 436
V+P++ YN+LI LCK RK EA+ +F+ M K + P T+ + +
Sbjct: 361 FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDT 420
Query: 437 VFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIH 496
L +M + G ++ Y LI C++ + M + +Y L+
Sbjct: 421 ALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMG 480
Query: 497 GLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWL 533
G GK+ +A Y EM KG P T L + L
Sbjct: 481 GYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 162/354 (45%), Gaps = 24/354 (6%)
Query: 173 VREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAIN 232
VR +++ L K R F A L M G P + + IR C ++D+ RA
Sbjct: 192 VRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGV---IRSLCELKDLSRAKE 248
Query: 233 TFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGW 290
+ G V I + L+ LC+ + V +A + K++ P ++ ++ ++ G
Sbjct: 249 MIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKP-DVVTYCTLVYGL 307
Query: 291 CNLIVSAREAE---RVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKI 347
C + +E E + EM + +S++ K K+ + L ++ + +
Sbjct: 308 CKV----QEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGV 363
Query: 348 TPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKE 407
+P+ VYNA+I +L KGR EA L M K + P+ VTY+ LI C+ K+D A
Sbjct: 364 SPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALS 423
Query: 408 VFNDMMKRNITPTIRTFHA-------FFRILRVEEEVFELLDKMRELGCYPTIETYIMLI 460
+M+ + ++ +++ F I E + E+++K E PT+ TY L+
Sbjct: 424 FLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLE----PTVVTYTSLM 479
Query: 461 RKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEM 514
+C K+++ ++++ M G++ ++ L+ GLF G +++A + EM
Sbjct: 480 GGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM 533
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 85/186 (45%), Gaps = 4/186 (2%)
Query: 326 YSKSSKLYKVFQLFDQMKNK-KITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTP 384
Y +S ++ +F M K + P+ + +A++H L K R A+ L M + P
Sbjct: 166 YVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRP 225
Query: 385 DVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKM 444
DV Y +I+ LC+ + + AKE+ M I ++ L +++V+E +
Sbjct: 226 DVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIK 285
Query: 445 RELG---CYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLN 501
++L P + TY L+ C+ ++ + ++ + M S ++ L+ GL
Sbjct: 286 KDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKR 345
Query: 502 GKVKEA 507
GK++EA
Sbjct: 346 GKIEEA 351
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 4/149 (2%)
Query: 354 YNAVIHALAKGRLVKEAVNLLQTM-EKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDM 412
++ +I + R V + V + + M K ++ P+V T ++L+ L K R A E+FNDM
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 413 MKRNITPTIRTFHAFFRILRVEEEVF---ELLDKMRELGCYPTIETYIMLIRKFCRWRKL 469
+ I P + + R L +++ E++ M GC I Y +LI C+ +K+
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 470 DEVFKIWNMMREDGVSHDRSSYIVLIHGL 498
E I + + D +Y L++GL
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGL 307
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/463 (24%), Positives = 200/463 (43%), Gaps = 32/463 (6%)
Query: 106 AQDVKTILDIMHEPGSRPSEIKHKLEXXXXXXXXXXXXXXXXXIRNDWEAAFTFFLWAGK 165
DVK M G+RP+ + + D EAA F K
Sbjct: 243 TDDVKRFFKDMIGAGARPTVFTYNIMIDCMCK------------EGDVEAARGLF-EEMK 289
Query: 166 QPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVR 225
G Y+SMI GK+ + D E M+ P ++T L I +C
Sbjct: 290 FRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNAL---INCFCKFG 346
Query: 226 DVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNV--FPLEIKSF 283
+ + + K G + + + L+ A C+ +Q A + V P E ++
Sbjct: 347 KLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEY-TY 405
Query: 284 NIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMK 343
+++ C I + +A R+ +EM + G++ +VV+Y +++ + ++ + +LF +M
Sbjct: 406 TSLIDANCK-IGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMD 464
Query: 344 NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKID 403
+ P+ YNA+IH K + + A+ LL ++ + PD++ Y + I LC KI+
Sbjct: 465 TAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIE 524
Query: 404 EAKEVFNDM----MKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIML 459
AK V N+M +K N A+F+ E + LLD+M+EL T+ T+ +L
Sbjct: 525 AAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL-HLLDEMKELDIEVTVVTFCVL 583
Query: 460 IRKFCRWRKLDEVFKIWNMMRED-GVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKG 518
I C+ + + + +N + D G+ + + + +I GL + +V+ A + +M +KG
Sbjct: 584 IDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKG 643
Query: 519 FLPEPKTEQMLQAWLSGRQGTEGQVTDLEHNQLEDDTVEKKVK 561
+P+ A+ S G Q LE L D E +K
Sbjct: 644 LVPDR------TAYTSLMDGNFKQGNVLEALALRDKMAEIGMK 680
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 170/400 (42%), Gaps = 37/400 (9%)
Query: 149 IRNDWEAAFTFFLWAGKQPGYAHSV-------------REYHSMISILGKM-------RK 188
++ D + AF FF W+ + G+ HSV R Y+ S+L +M
Sbjct: 118 LKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDV 177
Query: 189 FDTAWNLIEV-MRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGID 247
FD W+ V + G G +L + L M+ + AI F KRF
Sbjct: 178 FDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEE---------AIQCFSKMKRFRVFPKTR 228
Query: 248 EFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWH 305
GLL + D + P + ++NI+++ C A ++
Sbjct: 229 SCNGLLHRFAKLGKTDDVKRFFKDMIGAGARP-TVFTYNIMIDCMCKE-GDVEAARGLFE 286
Query: 306 EMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGR 365
EM RG+ D V+Y S++ + K +L F++MK+ PD YNA+I+ K
Sbjct: 287 EMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG 346
Query: 366 LVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFH 425
+ + + M+ N + P+VV+Y++L+ CK + +A + + DM + + P T+
Sbjct: 347 KLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 406
Query: 426 AFFRI---LRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMRED 482
+ + + F L ++M ++G + TY LI C ++ E +++ M
Sbjct: 407 SLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 466
Query: 483 GVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
GV + +SY LIHG + A + E++ +G P+
Sbjct: 467 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPD 506
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 163/417 (39%), Gaps = 81/417 (19%)
Query: 173 VREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIM----------IRKYC 222
V Y+++I+ K K M+G G P++V+ TL+ I+ Y
Sbjct: 332 VITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYV 391
Query: 223 AVRDVGRAINTFY----------------AFKRFG---FQVGID----EFQGLLSALCRY 259
+R VG N + AF R G QVG++ + L+ LC
Sbjct: 392 DMRRVGLVPNEYTYTSLIDANCKIGNLSDAF-RLGNEMLQVGVEWNVVTYTALIDGLCDA 450
Query: 260 KNVQDAEHLL--FCNKNVFPLEIKSFNIILNGW--------------------------- 290
+ +++AE L V P + S+N +++G+
Sbjct: 451 ERMKEAEELFGKMDTAGVIP-NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 509
Query: 291 --------CNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQM 342
C+L A+ V +EM + GI+ + + Y ++M Y KS + L D+M
Sbjct: 510 YGTFIWGLCSL-EKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Query: 343 KNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKN-NVTPDVVTYNSLIKPLCKNRK 401
K I + +I L K +LV +AV+ + + + + + ++I LCK+ +
Sbjct: 569 KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQ 628
Query: 402 IDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELL---DKMRELGCYPTIETYIM 458
++ A +F M+++ + P + + + V E L DKM E+G + Y
Sbjct: 629 VEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTS 688
Query: 459 LIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQ 515
L+ +L + M +G+ D I ++ + G + EA +E+Q
Sbjct: 689 LVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEA----VELQ 741
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 125/295 (42%), Gaps = 20/295 (6%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G ++ Y+++I K + D A L+ ++G G P L+ T I C++ +
Sbjct: 467 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF---IWGLCSLEKI 523
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNV-FPLEIKSFNII 286
A K G + + L+ A + N + HLL K + + + +F ++
Sbjct: 524 EAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVL 583
Query: 287 LNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKK 346
++G C + ++ + + G+Q + + +++ K +++ LF+QM K
Sbjct: 584 IDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKG 643
Query: 347 ITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAK 406
+ PDR Y +++ K V EA+ L M + + D++ Y SL+ L ++ +A+
Sbjct: 644 LVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKAR 703
Query: 407 EVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYP---TIETYIM 458
+M+ I P E +L K ELGC +++Y+M
Sbjct: 704 SFLEEMIGEGIHPD-------------EVLCISVLKKHYELGCIDEAVELQSYLM 745
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 188/385 (48%), Gaps = 19/385 (4%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
+V ++ +I+ L K K + A +++E M+ G P++V+ TL I YC + G+
Sbjct: 222 NVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTL---IDGYCKLGGNGKMY 278
Query: 232 NTFYAFKRF---GFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNII 286
K + F L+ + N+ + + +++V P + S+N +
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP-NVISYNSL 337
Query: 287 LNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKK 346
+NG CN EA + +M G+Q ++++Y ++++ + K+ L + +F +K +
Sbjct: 338 INGLCN-GGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQG 396
Query: 347 ITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAK 406
P ++YN +I A K + + L + ME+ + PDV TYN LI LC+N I+ AK
Sbjct: 397 AVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAK 456
Query: 407 EVFNDMMKRNITPTIRTFHAFFR-ILRVEE--EVFELLDKMRELGCYPTIETYIMLIRKF 463
++F+ + + + P + TFH R E + LL +M ++G P TY ++++ +
Sbjct: 457 KLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGY 515
Query: 464 CRWRKLDEVFKIWNMM-REDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
C+ L + M +E + + +SY VL+ G GK+++A+ EM KG +P
Sbjct: 516 CKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPN 575
Query: 523 PKTEQMLQAWLSGRQGTEGQVTDLE 547
T ++++ + +G V D+E
Sbjct: 576 RITYEIVKEEMV----DQGFVPDIE 596
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 113/225 (50%), Gaps = 6/225 (2%)
Query: 311 GIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEA 370
G + +S +M K ++ V ++ +M +KI P+ +N VI+AL K + +A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 371 VNLLQTMEKNNVTPDVVTYNSLIKPLCK---NRKIDEAKEVFNDMMKRNITPTIRTFHAF 427
++++ M+ +P+VV+YN+LI CK N K+ +A V +M++ +++P + TF+
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302
Query: 428 FRILRVEEEV---FELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGV 484
++ + ++ +M + P + +Y LI C K+ E + + M GV
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362
Query: 485 SHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
+ +Y LI+G N +KEA D + ++ +G +P + ML
Sbjct: 363 QPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNML 407
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 168/387 (43%), Gaps = 55/387 (14%)
Query: 192 AWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQG 251
A + + M G G P+ VT I+I C A FY + G
Sbjct: 217 AQKMFDDMTGRGISPNRVT---YTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNA 273
Query: 252 LLSALCRYKNVQDAEHLL-FCNKNVFPLEIKSFNIILNGWCNLIVSAR---EAERVWHEM 307
LL C+ + +A LL K+ F L ++ ++ +++G + AR +A ++ M
Sbjct: 274 LLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDG----LFRARRYTQAFELYANM 329
Query: 308 SKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLV 367
K+ I+ D++ Y ++ SK+ K+ +L M +K I+PD YNAVI AL L+
Sbjct: 330 LKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLL 389
Query: 368 KEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAF 427
+E +L M + PD T+ LI +C+N + EA+E+F ++ K +P++ TF+A
Sbjct: 390 EEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNAL 449
Query: 428 FRILRVEEEVFE---LLDKM---------------------------------REL---- 447
L E+ E LL KM R+L
Sbjct: 450 IDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFA 509
Query: 448 --GCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVK 505
G P I +Y +LI FCR +D K+ N+++ G+S D +Y LI+GL G+ +
Sbjct: 510 DTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREE 569
Query: 506 EAHDYYIEMQRKGFLPEPKTEQMLQAW 532
EA + + F P + L W
Sbjct: 570 EAFKLF--YAKDDFRHSPAVYRSLMTW 594
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 150/379 (39%), Gaps = 41/379 (10%)
Query: 154 EAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQT 213
+ F FF+WA ++ S + +I +L + D W +E ++ GG V
Sbjct: 74 QLGFRFFIWASRRE-RLRSRESFGLVIDMLSEDNGCDLYWQTLEELKSGGVS---VDSYC 129
Query: 214 LLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNK 273
++I Y + +A+ +F K F C
Sbjct: 130 FCVLISAYAKMGMAEKAVESFGRMKEFD-----------------------------CRP 160
Query: 274 NVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLY 333
+VF ++N+IL V A V++EM K ++ ++ +M K +
Sbjct: 161 DVF-----TYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTS 215
Query: 334 KVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLI 393
++FD M + I+P+R Y +I L + +A L M+ + PD V +N+L+
Sbjct: 216 DAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALL 275
Query: 394 KPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL---RVEEEVFELLDKMRELGCY 450
CK ++ EA E+ K +R + + L R + FEL M +
Sbjct: 276 DGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIK 335
Query: 451 PTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDY 510
P I Y +LI+ + K+++ K+ + M G+S D Y +I L G ++E
Sbjct: 336 PDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSL 395
Query: 511 YIEMQRKGFLPEPKTEQML 529
+EM P+ T +L
Sbjct: 396 QLEMSETESFPDACTHTIL 414
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 137/330 (41%), Gaps = 20/330 (6%)
Query: 216 IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNV 275
I+I C V A F ++ G + F L+ LC+ +++A LL +
Sbjct: 413 ILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVG 472
Query: 276 FPLEI---------KSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCY 326
P + +SF+ ++ S +A R + G D+VSY +++ +
Sbjct: 473 RPASLFLRLSHSGNRSFDTMVESG-----SILKAYRDLAHFADTGSSPDIVSYNVLINGF 527
Query: 327 SKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDV 386
++ + +L + ++ K ++PD YN +I+ L + +EA L + +P V
Sbjct: 528 CRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV 587
Query: 387 VTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRE 446
Y SL+ C+ RK+ A ++ +K+ T + + + E E L ++ E
Sbjct: 588 --YRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFK-EGETERALRRLIE 644
Query: 447 LGCYP---TIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGK 503
L T+ Y + + C+ + E +++++RE + S + LIHGL +
Sbjct: 645 LDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQ 704
Query: 504 VKEAHDYYIEMQRKGFLPEPKTEQMLQAWL 533
+ A + ++ F P+ L + L
Sbjct: 705 LDAAIEVFLYTLDNNFKLMPRVCNYLLSSL 734
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 163/332 (49%), Gaps = 13/332 (3%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G +V Y++++ +L K + D A + M G P+ T LL ++ A +
Sbjct: 300 GLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLL---VAEGQL 356
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPL--EIKSFNI 285
R KR+ Q GI + L+ L + +V +A H LFC+ FP+ E S+
Sbjct: 357 VRLDGVVEISKRYMTQ-GI--YSYLVRTLSKLGHVSEA-HRLFCDMWSFPVKGERDSYMS 412
Query: 286 ILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNK 345
+L C + EA + ++ ++G+ D + Y ++ S K ++ + LF++MK
Sbjct: 413 MLESLCGAGKTI-EAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKD 471
Query: 346 KITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEA 405
+PD YN +I + + V EA+N+ + +E+++ PD+++YNSLI L KN +DEA
Sbjct: 472 GPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEA 531
Query: 406 KEVFNDMMKRNITPTIRTFHAFFRILRVEEEV---FELLDKMRELGCYPTIETYIMLIRK 462
F +M ++ + P + T+ E V + L ++M GC P I TY +L+
Sbjct: 532 HVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDC 591
Query: 463 FCRWRKLDEVFKIWNMMREDGVSHDRSSYIVL 494
+ + E +++ M++ G++ D +Y VL
Sbjct: 592 LEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 152/351 (43%), Gaps = 44/351 (12%)
Query: 217 MIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCR-YKNVQDAEHL--LFCNK 273
+++ Y RD +A + + +R G ++ I + LL AL + K Q E + C +
Sbjct: 209 LLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDMKKRHCRR 268
Query: 274 NVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLY 333
+ + I + G C+ EA +++EM G+ +VV Y ++M +K +
Sbjct: 269 DEYTYTIMIRTMGRIGKCD------EAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVD 322
Query: 334 KVFQLFDQMKNKKITPDRKVYNAVIHAL-AKGRLVK------------------------ 368
K Q+F +M P+ Y+ +++ L A+G+LV+
Sbjct: 323 KAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTL 382
Query: 369 -------EAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTI 421
EA L M V + +Y S+++ LC K EA E+ + + ++ +
Sbjct: 383 SKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDT 442
Query: 422 RTFHAFFRIL---RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNM 478
++ F L + + +L +KM++ G P I TY +LI F R ++DE I+
Sbjct: 443 MMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEE 502
Query: 479 MREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
+ D SY LI+ L NG V EAH + EMQ KG P+ T L
Sbjct: 503 LERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTL 553
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 120/264 (45%), Gaps = 15/264 (5%)
Query: 303 VWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALA 362
V+ E+ + G + D+ +Y ++ +K K Q+F+ MK + D Y +I +
Sbjct: 225 VYCEIRRGGHKLDIFAYNMLLDALAKDEK---ACQVFEDMKKRHCRRDEYTYTIMIRTMG 281
Query: 363 KGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIR 422
+ EAV L M +T +VV YN+L++ L K + +D+A +VF+ M++ P
Sbjct: 282 RIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEY 341
Query: 423 TFHAFFRILRVEEEVFELLDKMRELGC-YPTIETYIMLIRKFCRWRKLDEVFKIWNMMRE 481
T+ +L E ++ LD + E+ Y T Y L+R + + E +++ M
Sbjct: 342 TYSLLLNLLVAEGQLVR-LDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWS 400
Query: 482 DGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEG 541
V +R SY+ ++ L GK EA + ++ KG + T+ M+ + G
Sbjct: 401 FPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVV----TDTMMYNTVFSALGKLK 456
Query: 542 QVTDLEHNQLEDDTVEKKVKATPS 565
Q++ + D EK K PS
Sbjct: 457 QISHIH------DLFEKMKKDGPS 474
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 2/218 (0%)
Query: 217 MIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVF 276
M+ C AI G + + SAL + K + L K
Sbjct: 413 MLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDG 472
Query: 277 PL-EIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKV 335
P +I ++NI++ + + EA ++ E+ + + D++SY S+++C K+ + +
Sbjct: 473 PSPDIFTYNILIASF-GRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEA 531
Query: 336 FQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKP 395
F +M+ K + PD Y+ ++ K V+ A +L + M P++VTYN L+
Sbjct: 532 HVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDC 591
Query: 396 LCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRV 433
L KN + EA ++++ M ++ +TP T+ R+ V
Sbjct: 592 LEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERLQSV 629
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 182/420 (43%), Gaps = 56/420 (13%)
Query: 151 NDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVT 210
ND A FF WAGKQ GY H Y++ L + F A L E+M G PS
Sbjct: 136 NDAAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPS--- 192
Query: 211 PQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQV-------------------------- 244
+ I+IR + R R + K+FGF+
Sbjct: 193 EKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYE 252
Query: 245 -----GIDE----FQGLLSALCRYKNVQDAEHLL------FCNKNVFPLEIKSFNIILNG 289
G+ E F L+ LC+ +++ +L C +VF ++ G
Sbjct: 253 DFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEG 312
Query: 290 WCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITP 349
NL S R VW EM + I+ DV++Y +++ K ++ + ++LF +MK K+I
Sbjct: 313 --NLDASLR----VWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILI 366
Query: 350 DRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVF 409
DR++Y +I V+ A NL + + + D+ YN++IK LC ++D+A ++F
Sbjct: 367 DREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLF 426
Query: 410 NDMMKRNITPTIRTFHAF---FRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRW 466
++ + P T + ++ + +L+++ ELG YP + + C
Sbjct: 427 QVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELG-YPVSDYLTQFFKLLCAD 485
Query: 467 RKLDEV-FKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT 525
+ + + ++ +++ G S Y +L+ L+ G ++++ + EM++ GF P+ +
Sbjct: 486 EEKNAMALDVFYILKTKG-HGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSS 544
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/408 (20%), Positives = 164/408 (40%), Gaps = 64/408 (15%)
Query: 173 VREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAIN 232
V Y +MI L D + + + MR P ++ TL++ + C V R
Sbjct: 298 VFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGL---CKDGRVERGYE 354
Query: 233 TFYAFKRFGFQVGIDE--FQGLLSALCRYKNVQDAEHLLFCN------KNVFPLEIKSFN 284
F K G Q+ ID ++ L+ V+ A CN + + +I +N
Sbjct: 355 LFMEMK--GKQILIDREIYRVLIEGFVADGKVRSA-----CNLWEDLVDSGYIADIGIYN 407
Query: 285 IILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCY------------------ 326
++ G C+ + +A +++ + ++ D + + IM Y
Sbjct: 408 AVIKGLCS-VNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGE 466
Query: 327 ---SKSSKLYKVFQLF--DQMKNK-----------KITPDRKVYNAVIHALAKGRLVKEA 370
S L + F+L D+ KN K VYN ++ AL K ++++
Sbjct: 467 LGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKS 526
Query: 371 VNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRI 430
++L M K PD +Y+ I + + A +++ + P+I + + +
Sbjct: 527 LSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKG 586
Query: 431 LRVEEEVFELLDKMRELGCYPTIET------YIMLIRKFCRWRKLDEVFKIWNMMREDGV 484
L E+ ++ +RE C +E+ Y + + C+ ++V K+ + M ++GV
Sbjct: 587 LCQIGEIDAVMLLVRE--CLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGV 644
Query: 485 SHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT---EQML 529
+ Y +I G+ +G +K A + + E++++ + E E+ML
Sbjct: 645 FINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADMVVYEEML 692
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 166/371 (44%), Gaps = 44/371 (11%)
Query: 159 FFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLI-EVMRGGGTGPSLVTPQTLLIM 217
FF WAGK+ + H Y ++I L + R + + I EV+R V+P L +
Sbjct: 112 FFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVS---VSPAVLSEL 168
Query: 218 IRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFP 277
++ + V +A++ FY K + + ++ L +Q+ +H
Sbjct: 169 VKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILML-----MQEGQH---------- 213
Query: 278 LEIKSFNIILNGWCNLIVSAREAERVWHEMSKRG-IQHDVVSYASIMSCYSKSSKLYKVF 336
+ V+ EM G D ++Y++++S Y K +
Sbjct: 214 --------------------EKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAI 253
Query: 337 QLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPL 396
+LFD+MK+ + P K+Y ++ K V++A++L + M++ +P V TY LIK L
Sbjct: 254 RLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGL 313
Query: 397 CKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELG---CYPTI 453
K ++DEA + DM++ +TP + + IL V EL + E+G C PT+
Sbjct: 314 GKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTV 373
Query: 454 ETYIMLIRKFCRWRK-LDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYI 512
+Y +I+ + + EV ++ M+ D VS +Y +LI G +V++A
Sbjct: 374 VSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLE 433
Query: 513 EMQRKGFLPEP 523
EM KGF P P
Sbjct: 434 EMDEKGFPPCP 444
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 154/358 (43%), Gaps = 27/358 (7%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y +++ I K+ K + A +L E M+ G P++ T L+ + K GR +
Sbjct: 271 YTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGK------AGRVDEAYG 324
Query: 236 AFK---RFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF------CNKNVFPLEIKSFNII 286
+K R G + L++ L + V++ ++ C V S+N +
Sbjct: 325 FYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVV-----SYNTV 379
Query: 287 LNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKK 346
+ E + +M + +Y+ ++ Y K++++ K L ++M K
Sbjct: 380 IKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKG 439
Query: 347 ITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKN--NVTPDVVTYNSLIKPLCKNRKIDE 404
P Y ++I+AL K + + A L + +++N NV+ V Y +IK K K+ E
Sbjct: 440 FPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRV--YAVMIKHFGKCGKLSE 497
Query: 405 AKEVFNDMMKRNITPTIRTFHAFFRIL---RVEEEVFELLDKMRELGCYPTIETYIMLIR 461
A ++FN+M + P + ++A + + E LL KM E GC I ++ +++
Sbjct: 498 AVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILN 557
Query: 462 KFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGF 519
F R +++ ++ G+ D +Y L+ G +EA EM+ KGF
Sbjct: 558 GFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGF 615
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 133/326 (40%), Gaps = 48/326 (14%)
Query: 165 KQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAV 224
K+ G + +V Y +I LGK + D A+ + M G P +V L+ ++ K V
Sbjct: 295 KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRV 354
Query: 225 RDVG---------RAINTFYAFKR-----FGFQVGIDE-------------------FQG 251
++ R T ++ F + + E +
Sbjct: 355 EELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSI 414
Query: 252 LLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIILNGWCNLIVSAREAER------VWH 305
L+ C+ V+ A LL ++ K F +C+LI + +A+R ++
Sbjct: 415 LIDGYCKTNRVEKALLLLE------EMDEKGFPPCPAAYCSLINALGKAKRYEAANELFK 468
Query: 306 EMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGR 365
E+ + YA ++ + K KL + LF++MKN+ PD YNA++ + K
Sbjct: 469 ELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAG 528
Query: 366 LVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITP---TIR 422
++ EA +LL+ ME+N D+ ++N ++ + A E+F + I P T
Sbjct: 529 MINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYN 588
Query: 423 TFHAFFRILRVEEEVFELLDKMRELG 448
T F + EE ++ +M++ G
Sbjct: 589 TLLGCFAHAGMFEEAARMMREMKDKG 614
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 95/198 (47%), Gaps = 5/198 (2%)
Query: 166 QPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVR 225
+ G+ Y S+I+ LGK ++++ A L + ++ V+ + +MI+ +
Sbjct: 437 EKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGN---VSSRVYAVMIKHFGKCG 493
Query: 226 DVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF-CNKNVFPLEIKSFN 284
+ A++ F K G + + L+S + + + +A LL +N +I S N
Sbjct: 494 KLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHN 553
Query: 285 IILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKN 344
IILNG+ V R E ++ + GI+ D V+Y +++ C++ + + ++ +MK+
Sbjct: 554 IILNGFARTGVPRRAIE-MFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKD 612
Query: 345 KKITPDRKVYNAVIHALA 362
K D Y++++ A+
Sbjct: 613 KGFEYDAITYSSILDAVG 630
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 163/371 (43%), Gaps = 44/371 (11%)
Query: 173 VREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAIN 232
VR Y++ IS L +++D AW + E M P VT L+ +RK A R
Sbjct: 273 VRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRK--AGRSAKEVWE 330
Query: 233 TFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIILNGWCN 292
F G + D F GL+ + FC++ +
Sbjct: 331 IFEKMSEKGVKWSQDVFGGLVKS--------------FCDEGL----------------- 359
Query: 293 LIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRK 352
EA + EM K+GI+ + + Y ++M Y+KS+ + +V LF +M++K + P
Sbjct: 360 ----KEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAA 415
Query: 353 VYNAVIHALAKGRLVKEAV-NLLQTMEKNNVTPDVVTYNSLIKPLCKNRKI-DEAKEVFN 410
YN ++ A A+ R+ + V LL+ ME + P+V +Y LI + +K+ D A + F
Sbjct: 416 TYNILMDAYAR-RMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFL 474
Query: 411 DMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIMLIRKFCRWR 467
M K + P+ ++ A V E+ + ++M + G P++ETY ++ F R
Sbjct: 475 RMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSG 534
Query: 468 KLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQ 527
++ +IW +M + + R +Y L+ G G EA D E + G P T
Sbjct: 535 DTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYN 594
Query: 528 ML-QAWLSGRQ 537
ML A+ G Q
Sbjct: 595 MLMNAYARGGQ 605
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 110/263 (41%), Gaps = 14/263 (5%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y++++ K + L MR G PS T I++ Y
Sbjct: 382 YNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYN---ILMDAYARRMQPDIVETLLR 438
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQD--AEHLLFCNKNVFPLEIKSFNIILNGWCNL 293
+ G + + + L+SA R K + D A+ L K S+ +++ +
Sbjct: 439 EMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYS-- 496
Query: 294 IVSA--REAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDR 351
VS +A + EM K GI+ V +Y S++ + +S K+ +++ M +KI R
Sbjct: 497 -VSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTR 555
Query: 352 KVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFND 411
YN ++ AK L EA +++ K + P V+TYN L+ + + + ++ +
Sbjct: 556 ITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKE 615
Query: 412 MMKRNITPTIRTF----HAFFRI 430
M N+ P T+ +AF R+
Sbjct: 616 MAALNLKPDSITYSTMIYAFVRV 638
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 21/246 (8%)
Query: 168 GYAHSVREYHSMISILGKMRKF-DTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRD 226
G +V+ Y +IS G+ +K D A + M+ G PS + +I Y
Sbjct: 444 GLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPS---SHSYTALIHAYSVSGW 500
Query: 227 VGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIK----S 282
+A +F + G + ++ + +L A ++ D L+ K + +IK +
Sbjct: 501 HEKAYASFEEMCKEGIKPSVETYTSVLDA---FRRSGDTGKLMEIWKLMLREKIKGTRIT 557
Query: 283 FNIILNGWC--NLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFD 340
+N +L+G+ L + AR+ V E SK G+Q V++Y +M+ Y++ + K+ QL
Sbjct: 558 YNTLLDGFAKQGLYIEARD---VVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLK 614
Query: 341 QMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSL-----IKP 395
+M + PD Y+ +I+A + R K A + M K+ PD +Y L K
Sbjct: 615 EMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKA 674
Query: 396 LCKNRK 401
KNRK
Sbjct: 675 KTKNRK 680
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 6/206 (2%)
Query: 361 LAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPT 420
L + R+ + LL + DV YN+ I L +++ D+A EV+ M K N+ P
Sbjct: 248 LGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPD 307
Query: 421 IRTFHAFFRILR----VEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIW 476
T LR +EV+E+ +KM E G + + + L++ FC +E I
Sbjct: 308 NVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQ 367
Query: 477 NMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGR 536
M + G+ + Y L+ + ++E + EM+ KG P T +L + R
Sbjct: 368 TEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARR 427
Query: 537 QGTEGQVTDLEHNQLEDDTVEKKVKA 562
+ + + ++ED +E VK+
Sbjct: 428 M--QPDIVETLLREMEDLGLEPNVKS 451
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 172/421 (40%), Gaps = 65/421 (15%)
Query: 153 WEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQ 212
+E AF+ Q G+ Y +++ L K + A+ L E M+ GG +
Sbjct: 464 YEKAFSVIREMIGQ-GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGL---VADVY 519
Query: 213 TLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCN 272
T IM+ +C + +A F + G + + L+ A + K V A L
Sbjct: 520 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL---- 575
Query: 273 KNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKL 332
+ M G ++V+Y++++ + K+ ++
Sbjct: 576 -------------------------------FETMLSEGCLPNIVTYSALIDGHCKAGQV 604
Query: 333 YKVFQLFDQMKNKKITPDRKVY----------------NAVIHALAKGRLVKEAVNLLQT 376
K Q+F++M K PD +Y A++ K V+EA LL
Sbjct: 605 EKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDA 664
Query: 377 MEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHA----FFRILR 432
M P+ + Y++LI LCK K+DEA+EV +M + T+ T+ + +F++ R
Sbjct: 665 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR 724
Query: 433 VEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYI 492
++ ++L KM E C P + Y +I C+ K DE +K+ MM E G + +Y
Sbjct: 725 -QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 783
Query: 493 VLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDLEHNQLE 552
+I G + GK++ + M KG P T ++L + D+ HN LE
Sbjct: 784 AMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI-----DHCCKNGALDVAHNLLE 838
Query: 553 D 553
+
Sbjct: 839 E 839
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 168/403 (41%), Gaps = 61/403 (15%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLI------------------- 216
Y +IS L + F+ A + + MR P++VT TLL
Sbjct: 305 YTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMM 364
Query: 217 -------------MIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQ 263
++ YC D A + G G + L+ ++C K+
Sbjct: 365 MEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSL 424
Query: 264 DAEHLLFCNKNVFPLEIKSFNIILN-----GWCNLIVSAREAER---VWHEMSKRGIQHD 315
+ + L K E+ + ++LN + + SA + E+ V EM +G D
Sbjct: 425 NCDLLDLAEKAYS--EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPD 482
Query: 316 VVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQ 375
+Y+ +++ +SK+ F LF++MK + D Y ++ + K L+++A
Sbjct: 483 TSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFN 542
Query: 376 TMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFF----RIL 431
M + TP+VVTY +LI K +K+ A E+F M+ P I T+ A +
Sbjct: 543 EMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAG 602
Query: 432 RVEE--EVFELL---DKMRELGCY----------PTIETYIMLIRKFCRWRKLDEVFKIW 476
+VE+ ++FE + + ++ Y P + TY L+ FC+ +++E K+
Sbjct: 603 QVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLL 662
Query: 477 NMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGF 519
+ M +G ++ Y LI GL GK+ EA + EM GF
Sbjct: 663 DAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 705
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/426 (19%), Positives = 172/426 (40%), Gaps = 47/426 (11%)
Query: 155 AAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTL 214
A +FF+WAG+Q GY H+ Y++++ ++ + ++ +R V + L
Sbjct: 147 AVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKE---VFGEFL 203
Query: 215 LIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDA--------- 265
+++RK+C A+ K F F+ + L+ A + + A
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 266 ------------------------EHLLFCNKNVFPLEIKSFNIILNGWCNLIVSAREAE 301
E L F + + +++G C + EA
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASL-FEEAM 322
Query: 302 RVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHAL 361
+ M +VV+Y++++ +L + ++ + M + P K++N+++HA
Sbjct: 323 DFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAY 382
Query: 362 AKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRK------IDEAKEVFNDMMKR 415
A LL+ M K P V YN LI +C ++ +D A++ +++M+
Sbjct: 383 CTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAA 442
Query: 416 NITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEV 472
+ +F R L E+ F ++ +M G P TY ++ C K++
Sbjct: 443 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELA 502
Query: 473 FKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT-EQMLQA 531
F ++ M+ G+ D +Y +++ G +++A ++ EM+ G P T ++ A
Sbjct: 503 FLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHA 562
Query: 532 WLSGRQ 537
+L ++
Sbjct: 563 YLKAKK 568
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 163/414 (39%), Gaps = 55/414 (13%)
Query: 165 KQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLL--------- 215
++ G +V Y ++I K +K A L E M G P++VT L+
Sbjct: 545 REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV 604
Query: 216 ----IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL-- 269
+ + C +DV F + + + + LL C+ V++A LL
Sbjct: 605 EKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDA 664
Query: 270 FCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKS 329
+ P +I ++ +++G C + EA+ V EMS+ G + +Y+S++ Y K
Sbjct: 665 MSMEGCEPNQI-VYDALIDGLCK-VGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKV 722
Query: 330 SKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTY 389
+ ++ +M P+ +Y +I L K EA L+Q ME+ P+VVTY
Sbjct: 723 KRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTY 782
Query: 390 NSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFR------ILRVEEEVFE---- 439
++I KI+ E+ M + + P T+ L V + E
Sbjct: 783 TAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842
Query: 440 --------------------------LLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVF 473
LLD++ + P + Y +LI + ++L+
Sbjct: 843 THWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMAL 902
Query: 474 KIWNMMREDGVS--HDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT 525
++ + + S+Y LI L L KV+ A + EM +KG +PE ++
Sbjct: 903 RLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQS 956
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 119/278 (42%), Gaps = 11/278 (3%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G+ ++ Y S+I K+++ D A ++ M P++V MI C V
Sbjct: 704 GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTE---MIDGLCKVGKT 760
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNI 285
A + G Q + + ++ ++ LL +K V P + ++ +
Sbjct: 761 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYV-TYRV 819
Query: 286 ILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNK 345
+++ C + A + EM + Y ++ ++K + + L D++
Sbjct: 820 LIDHCCK-NGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQD 876
Query: 346 KITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVT--PDVVTYNSLIKPLCKNRKID 403
P VY +I L K + ++ A+ LL+ + + T TYNSLI+ LC K++
Sbjct: 877 DTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVE 936
Query: 404 EAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELL 441
A ++F++M K+ + P +++F + + L ++ E L
Sbjct: 937 TAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 191/417 (45%), Gaps = 36/417 (8%)
Query: 156 AFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIE------------VMRG-- 201
+++FF+W P HS++ MI IL K + F TA L++ V+R
Sbjct: 63 SWSFFIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLV 122
Query: 202 GGTG--PSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRY 259
GG P V+ +MI Y + +I F + G + + LL++L +
Sbjct: 123 GGVSEDPEDVSHVFSWLMIY-YAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVK- 180
Query: 260 KNVQDAEHLLFCNKNVFPL----EIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHD 315
+ + D +F K + L I +N++++ C+ +AE++ EM ++G+ D
Sbjct: 181 QRLTDTVWKIF--KKMVKLGVVANIHVYNVLVHA-CSKSGDPEKAEKLLSEMEEKGVFPD 237
Query: 316 VVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQ 375
+ +Y +++S Y K S ++ + D+M+ + P+ YN+ IH ++ ++EA L +
Sbjct: 238 IFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFR 297
Query: 376 TMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEE 435
+ K++VT + VTY +LI C+ IDEA + M R +P + T+++ R L +
Sbjct: 298 EI-KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDG 356
Query: 436 EVFE---LLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYI 492
+ E LL +M P T LI +C+ + K+ M E G+ D SY
Sbjct: 357 RIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYK 416
Query: 493 VLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSG---RQGTEGQVTDL 546
LIHG +++ A + M KGF P T +WL Q + ++T L
Sbjct: 417 ALIHGFCKVLELENAKEELFSMIEKGFSPGYAT----YSWLVDGFYNQNKQDEITKL 469
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 162/371 (43%), Gaps = 7/371 (1%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G ++ Y+ ++ K + A L+ M G P + T TL I YC
Sbjct: 198 GVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTL---ISVYCKKSMH 254
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIIL 287
A++ +R G I + + R +++A L K+ ++ ++
Sbjct: 255 FEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLI 314
Query: 288 NGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKI 347
+G+C + EA R+ M RG VV+Y SI+ + ++ + +L +M KKI
Sbjct: 315 DGYCRM-NDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKI 373
Query: 348 TPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKE 407
PD N +I+A K + AV + + M ++ + D+ +Y +LI CK +++ AKE
Sbjct: 374 EPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKE 433
Query: 408 VFNDMMKRNITPTIRTFHAF---FRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFC 464
M+++ +P T+ F ++E+ +LL++ + G + Y LIR+ C
Sbjct: 434 ELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRIC 493
Query: 465 RWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPK 524
+ ++D ++ M + G+ D + + + + GKV EA + M + + K
Sbjct: 494 KLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLK 553
Query: 525 TEQMLQAWLSG 535
+ + A +G
Sbjct: 554 LYKSISASYAG 564
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 172/389 (44%), Gaps = 16/389 (4%)
Query: 156 AFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLL 215
A FF ++ K + + + + IL +MR FD AW L+ +R P+L++ +++
Sbjct: 86 ALEFFKYSLKSSKSSPTSDSFEKTLHILARMRYFDQAWALMAEVRK--DYPNLLSFKSMS 143
Query: 216 IMIRKYCAVRDVGRAINTFYAFKR-----FGFQVGIDEFQGLLSALCRYKNVQDAEHLLF 270
I++ C + G T AF + F + G+DEF LL A C + +++A +
Sbjct: 144 ILL---CKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFE 200
Query: 271 CNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSS 330
+ F ++K+ NI+L G+ E +HEM KRG + + V+Y + + K
Sbjct: 201 KLHSRFNPDVKTMNILLLGF-KEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKR 259
Query: 331 KLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYN 390
+ +LF+ M ++ +IH R +A L + K +TPD YN
Sbjct: 260 NFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYN 319
Query: 391 SLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEE-----VFELLDKMR 445
+L+ L K + A +V +M ++ I P TFH+ F + +E V E KM+
Sbjct: 320 ALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMK 379
Query: 446 ELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVK 505
E P T +ML++ FC +++ +W M E G + +L L +
Sbjct: 380 ERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRAN 439
Query: 506 EAHDYYIEMQRKGFLPEPKTEQMLQAWLS 534
+A + + +G +ML+ LS
Sbjct: 440 DAFECSWQTVERGRCVSEPVYRMLETSLS 468
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 126/260 (48%), Gaps = 4/260 (1%)
Query: 281 KSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFD 340
+ + I+NG C + A + +M + I+ VV Y +I+ K LF
Sbjct: 42 QPYGTIINGLCKM-GDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFT 100
Query: 341 QMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNR 400
+M +K I PD Y+ +I + + +A LL+ M + + PDVVT+++LI L K
Sbjct: 101 EMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEG 160
Query: 401 KIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFE---LLDKMRELGCYPTIETYI 457
K+ EA+E++ DM++R I PT T+++ ++ + + +LD M C P + T+
Sbjct: 161 KVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFS 220
Query: 458 MLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRK 517
LI +C+ +++D +I+ M G+ + +Y LIHG G + A D M
Sbjct: 221 TLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISS 280
Query: 518 GFLPEPKTEQMLQAWLSGRQ 537
G P T Q + A L ++
Sbjct: 281 GVAPNYITFQSMLASLCSKK 300
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 109/257 (42%), Gaps = 34/257 (13%)
Query: 307 MSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFD-------------------------- 340
M + G + DVV++ ++M+ ++ + L D
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESA 60
Query: 341 -----QMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKP 395
+M+ I +YNA+I L K A NL M + PDV+TY+ +I
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 396 LCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPT 452
C++ + +A+++ DM++R I P + TF A L E E E+ M G +PT
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180
Query: 453 IETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYI 512
TY +I FC+ +L++ ++ + M S D ++ LI+G +V + +
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFC 240
Query: 513 EMQRKGFLPEPKTEQML 529
EM R+G + T L
Sbjct: 241 EMHRRGIVANTVTYTTL 257
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 93/210 (44%), Gaps = 7/210 (3%)
Query: 173 VREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAIN 232
V Y MI + ++ A L+ M P +VT L+ + K V A
Sbjct: 111 VITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKE---GKVSEAEE 167
Query: 233 TFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGW 290
+ R G + ++ C+ + DA+ +L +K+ P ++ +F+ ++NG+
Sbjct: 168 IYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSP-DVVTFSTLINGY 226
Query: 291 CNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPD 350
C ++ EM +RGI + V+Y +++ + + L L + M + + P+
Sbjct: 227 CK-AKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPN 285
Query: 351 RKVYNAVIHALAKGRLVKEAVNLLQTMEKN 380
+ +++ +L + +++A +L+ ++K+
Sbjct: 286 YITFQSMLASLCSKKELRKAFAILEDLQKS 315
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 166/388 (42%), Gaps = 43/388 (11%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLL------------ 215
G V Y +I L RK D A + E M+ G P VT TLL
Sbjct: 288 GCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSV 347
Query: 216 --------------------IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSA 255
I++ C + G A +T + G + + L+
Sbjct: 348 KQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICG 407
Query: 256 LCRYKNVQDAEHLLFCNKNVFPLEIKSFNIIL----NGWCNLIVSAREAERVWHEMSKRG 311
L R + DA L F N ++ ++ I+ G VSA E + +M +G
Sbjct: 408 LLRVHRLDDALEL-FGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET---FEKMKTKG 463
Query: 312 IQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAV 371
I ++V+ + + +K+ + + Q+F +K+ + PD YN ++ +K + EA+
Sbjct: 464 IAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAI 523
Query: 372 NLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL 431
LL M +N PDV+ NSLI L K ++DEA ++F M + + PT+ T++ L
Sbjct: 524 KLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGL 583
Query: 432 RVE---EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDR 488
+E EL + M + GC P T+ L C+ ++ K+ M + G D
Sbjct: 584 GKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDV 643
Query: 489 SSYIVLIHGLFLNGKVKEAHDYYIEMQR 516
+Y +I GL NG+VKEA ++ +M++
Sbjct: 644 FTYNTIIFGLVKNGQVKEAMCFFHQMKK 671
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 174/360 (48%), Gaps = 33/360 (9%)
Query: 165 KQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAV 224
++ G+ V + ++ L K F A++ ++VMR G P+L T TL+ + + V
Sbjct: 355 EKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLR---V 411
Query: 225 RDVGRAINTFYAFKRFG-------FQVGIDEFQ---GLLSALCRYKNVQD---AEHLLFC 271
+ A+ F + G + V ID + +SAL ++ ++ A +++ C
Sbjct: 412 HRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVAC 471
Query: 272 NKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSK 331
N +++ L + REA+++++ + G+ D V+Y +M CYSK +
Sbjct: 472 NASLYSLAKAGRD-------------REAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE 518
Query: 332 LYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNS 391
+ + +L +M PD V N++I+ L K V EA + M++ + P VVTYN+
Sbjct: 519 IDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 578
Query: 392 LIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEV---FELLDKMRELG 448
L+ L KN KI EA E+F M+++ P TF+ F L +EV ++L KM ++G
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 638
Query: 449 CYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAH 508
C P + TY +I + ++ E ++ M++ V D + L+ G+ +++A+
Sbjct: 639 CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAY 697
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 118/265 (44%), Gaps = 11/265 (4%)
Query: 291 CNLIVSA-------REAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMK 343
CN ++ A E V+ M KR I+ D +Y +I S L + +M+
Sbjct: 121 CNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMR 180
Query: 344 NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKID 403
+ YN +IH L K R EA+ + + M P + TY+SL+ L K R ID
Sbjct: 181 EFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDID 240
Query: 404 EAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIMLI 460
+ +M + P + TF R+L E +E+L +M + GC P + TY +LI
Sbjct: 241 SVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLI 300
Query: 461 RKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFL 520
C RKLD +++ M+ DR +YI L+ N + ++ EM++ G +
Sbjct: 301 DALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHV 360
Query: 521 PEPKTEQMLQAWLSGRQGTEGQVTD 545
P+ T +L L + G G+ D
Sbjct: 361 PDVVTFTILVDALC-KAGNFGEAFD 384
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 166/392 (42%), Gaps = 43/392 (10%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G+ S++ Y S++ LGK R D+ L++ M G P++ T +R +
Sbjct: 218 GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTI---------CIRVL 268
Query: 228 GRA--INTFYA-FKRF---GFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVF----- 276
GRA IN Y KR G + + L+ ALC + + C K VF
Sbjct: 269 GRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD-------CAKEVFEKMKT 321
Query: 277 ----PLEIKSFNIILNGWCNLIVSAREAERV---WHEMSKRGIQHDVVSYASIMSCYSKS 329
P + ++ + R+ + V W EM K G DVV++ ++ K+
Sbjct: 322 GRHKPDRVTYITLL-----DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKA 376
Query: 330 SKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTY 389
+ F D M+++ I P+ YN +I L + + +A+ L ME V P TY
Sbjct: 377 GNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTY 436
Query: 390 NSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHA-FFRILRV--EEEVFELLDKMRE 446
I K+ A E F M + I P I +A + + + + E ++ +++
Sbjct: 437 IVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKD 496
Query: 447 LGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKE 506
+G P TY M+++ + + ++DE K+ + M E+G D LI+ L+ +V E
Sbjct: 497 IGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDE 556
Query: 507 AHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQG 538
A ++ M+ P T L A L G+ G
Sbjct: 557 AWKMFMRMKEMKLKPTVVTYNTLLAGL-GKNG 587
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 6/244 (2%)
Query: 288 NGWCNLIVSAR---EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKN 344
NG +L++ +R EA V+ M G + + +Y+S+M K + V L +M+
Sbjct: 192 NGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMET 251
Query: 345 KKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDE 404
+ P+ + I L + + EA +L+ M+ PDVVTY LI LC RK+D
Sbjct: 252 LGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDC 311
Query: 405 AKEVFNDMMKRNITPTIRTFHAF---FRILRVEEEVFELLDKMRELGCYPTIETYIMLIR 461
AKEVF M P T+ F R + V + +M + G P + T+ +L+
Sbjct: 312 AKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVD 371
Query: 462 KFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
C+ E F ++MR+ G+ + +Y LI GL ++ +A + + M+ G P
Sbjct: 372 ALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKP 431
Query: 522 EPKT 525
T
Sbjct: 432 TAYT 435
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 113/250 (45%), Gaps = 4/250 (1%)
Query: 284 NIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMK 343
NI+++G + + MS R +Y ++ SKS +LY+ QLF+ M
Sbjct: 859 NIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGML 918
Query: 344 NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKID 403
+ P+ +YN +I+ K A L + M K V PD+ TY+ L+ LC ++D
Sbjct: 919 DYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVD 978
Query: 404 EAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMR-ELGCYPTIETYIML 459
E F ++ + + P + ++ L EE L ++M+ G P + TY L
Sbjct: 979 EGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSL 1038
Query: 460 IRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGF 519
I ++E KI+N ++ G+ + ++ LI G L+GK + A+ Y M GF
Sbjct: 1039 ILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGF 1098
Query: 520 LPEPKTEQML 529
P T + L
Sbjct: 1099 SPNTGTYEQL 1108
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 151/315 (47%), Gaps = 18/315 (5%)
Query: 257 CRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGW--CNLIVSAREAERVWHEMSKRGI 312
C++ NV A L F ++ ++N+++ G ++I A++ V+ ++ G
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQD---VFLQVKSTGC 816
Query: 313 QHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVN 372
DV +Y ++ Y KS K+ ++F+L+ +M + + +N VI L K V +A++
Sbjct: 817 IPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALD 876
Query: 373 L-LQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAF---F 428
L M + +P TY LI L K+ ++ EAK++F M+ P ++ F
Sbjct: 877 LYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGF 936
Query: 429 RILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDR 488
+ L +M + G P ++TY +L+ C ++DE + ++E G++ D
Sbjct: 937 GKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDV 996
Query: 489 SSYIVLIHGLFLNGKVKEAHDYYIEMQ-RKGFLPEPKT--EQMLQAWLSGRQGTEGQVTD 545
Y ++I+GL + +++EA + EM+ +G P+ T +L ++G G++
Sbjct: 997 VCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKI-- 1054
Query: 546 LEHNQLEDDTVEKKV 560
+N+++ +E V
Sbjct: 1055 --YNEIQRAGLEPNV 1067
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 126/249 (50%), Gaps = 13/249 (5%)
Query: 252 LLSALCRYKNVQDAEHL---LFCNKNVFPLEIKSFNIILNGWCNLIVSAR--EAERVWHE 306
++S L + NV DA L L +++ P ++ +++G L S R EA++++
Sbjct: 861 VISGLVKAGNVDDALDLYYDLMSDRDFSPTAC-TYGPLIDG---LSKSGRLYEAKQLFEG 916
Query: 307 MSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRL 366
M G + + Y +++ + K+ + LF +M + + PD K Y+ ++ L
Sbjct: 917 MLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 976
Query: 367 VKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDM-MKRNITPTIRTFH 425
V E ++ + ++++ + PDVV YN +I L K+ +++EA +FN+M R ITP + T++
Sbjct: 977 VDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYN 1036
Query: 426 AFFRILRVE---EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMRED 482
+ L + EE ++ ++++ G P + T+ LIR + K + + ++ M
Sbjct: 1037 SLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTG 1096
Query: 483 GVSHDRSSY 491
G S + +Y
Sbjct: 1097 GFSPNTGTY 1105
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 152/311 (48%), Gaps = 7/311 (2%)
Query: 216 IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF-CNKN 274
I+I+ C ++ ++ + FGF + + L+ C+ ++ A+ L F K
Sbjct: 168 ILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKL 227
Query: 275 VFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYK 334
+++ +++NG V ++ ++ +M + G+ ++ +Y +M+ K +
Sbjct: 228 GLVANERTYTVLINGLFKNGVK-KQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKD 286
Query: 335 VFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIK 394
FQ+FD+M+ + ++ + YN +I L + + EA ++ M+ + + P+++TYN+LI
Sbjct: 287 AFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLID 346
Query: 395 PLCKNRKIDEAKEVFNDMMKRNITPTIRTFH----AFFRILRVEEEVFELLDKMRELGCY 450
C K+ +A + D+ R ++P++ T++ F R +++ +M E G
Sbjct: 347 GFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAA-KMVKEMEERGIK 405
Query: 451 PTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDY 510
P+ TY +LI F R +++ ++ M E G+ D +Y VLIHG + G++ EA
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 511 YIEMQRKGFLP 521
+ M K P
Sbjct: 466 FKSMVEKNCEP 476
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 151/320 (47%), Gaps = 10/320 (3%)
Query: 216 IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNV 275
++I Y + + +I+ F GF G + F LL+ + + NK+
Sbjct: 99 VIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK 158
Query: 276 FPLEIKSFNIILNGWCNLIVSAREAERVWH---EMSKRGIQHDVVSYASIMSCYSKSSKL 332
L++ SF I++ G C A E E+ + E+++ G +VV Y +++ K ++
Sbjct: 159 VVLDVYSFGILIKGCC----EAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 333 YKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSL 392
K LF +M + + + Y +I+ L K + K+ + + M+++ V P++ TYN +
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 393 IKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGC 449
+ LCK+ + +A +VF++M +R ++ I T++ L E E +++D+M+ G
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334
Query: 450 YPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHD 509
P + TY LI FC KL + + ++ G+S +Y +L+ G G A
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAK 394
Query: 510 YYIEMQRKGFLPEPKTEQML 529
EM+ +G P T +L
Sbjct: 395 MVKEMEERGIKPSKVTYTIL 414
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 166/365 (45%), Gaps = 21/365 (5%)
Query: 187 RKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGI 246
+ FD L E G P++V TL I C ++ +A + F+ + G
Sbjct: 181 KSFDLLIELTEF----GFSPNVVIYTTL---IDGCCKKGEIEKAKDLFFEMGKLGLVANE 233
Query: 247 DEFQGLLSALCRYKNVQDAEHLLFCNK----NVFPLEIKSFNIILNGWCNLIVSAREAER 302
+ L++ L +KN + K VFP + ++N ++N C ++A +
Sbjct: 234 RTYTVLINGL--FKNGVKKQGFEMYEKMQEDGVFP-NLYTYNCVMNQLCK-DGRTKDAFQ 289
Query: 303 VWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALA 362
V+ EM +RG+ ++V+Y +++ + KL + ++ DQMK+ I P+ YN +I
Sbjct: 290 VFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFC 349
Query: 363 KGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIR 422
+ +A++L + ++ ++P +VTYN L+ C+ A ++ +M +R I P+
Sbjct: 350 GVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKV 409
Query: 423 TF----HAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNM 478
T+ F R +E+ + +L M ELG P + TY +LI FC +++E +++
Sbjct: 410 TYTILIDTFARSDNMEKAI-QLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468
Query: 479 MREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQ-MLQAWLSGRQ 537
M E + Y +I G G A EM+ K P + + M++ R+
Sbjct: 469 MVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERK 528
Query: 538 GTEGQ 542
E +
Sbjct: 529 SKEAE 533
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 142/300 (47%), Gaps = 41/300 (13%)
Query: 165 KQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAV 224
++ G + ++ Y+++I L + K + A +++ M+ G P+L+T TL I +C V
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTL---IDGFCGV 351
Query: 225 RDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFN 284
+G+A+ +LCR D + ++ + P + ++N
Sbjct: 352 GKLGKAL-----------------------SLCR-----DLK-----SRGLSP-SLVTYN 377
Query: 285 IILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKN 344
I+++G+C ++ A+ V EM +RGI+ V+Y ++ +++S + K QL M+
Sbjct: 378 ILVSGFCRKGDTSGAAKMV-KEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436
Query: 345 KKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDE 404
+ PD Y+ +IH + EA L ++M + N P+ V YN++I CK
Sbjct: 437 LGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYR 496
Query: 405 AKEVFNDMMKRNITPTIRTFHAFFRIL---RVEEEVFELLDKMRELGCYPTIETYIMLIR 461
A ++ +M ++ + P + ++ +L R +E L++KM + G P+ ++ R
Sbjct: 497 ALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISR 556
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 118/235 (50%), Gaps = 4/235 (1%)
Query: 304 WHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAK 363
++EM G + +++ SS + + F++ K+K + D + +I +
Sbjct: 117 FNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK-VVLDVYSFGILIKGCCE 175
Query: 364 GRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRT 423
++++ +LL + + +P+VV Y +LI CK +I++AK++F +M K + RT
Sbjct: 176 AGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERT 235
Query: 424 FHAFFRIL---RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMR 480
+ L V+++ FE+ +KM+E G +P + TY ++ + C+ + + F++++ MR
Sbjct: 236 YTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR 295
Query: 481 EDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSG 535
E GVS + +Y LI GL K+ EA+ +M+ G P T L G
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCG 350
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 171/402 (42%), Gaps = 52/402 (12%)
Query: 156 AFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLL 215
+ FF WA P Y + EY + L +K+++ W +++ M+ ++ +TL
Sbjct: 94 SLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLD---ISGETLC 150
Query: 216 IMIRKYCAVRDVGRAINTFYAF-KRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCN 272
+I +Y V +A+ F K G Q +D + LL ALC K A L+
Sbjct: 151 FIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIR 210
Query: 273 KNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQ-----HDVVSYASIMSCYS 327
K + P + +++ I++NGWC+ +EA+ EMS+RG D++ + + Y
Sbjct: 211 KGLKP-DKRTYAILVNGWCS-AGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYL 268
Query: 328 KSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVV 387
+S+K ++ +M PD + +N +I A++K V+ + + T K + D+
Sbjct: 269 ESAK-----EMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDID 323
Query: 388 TYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMREL 447
TY +LI + K KIDEA F LL+ E
Sbjct: 324 TYKTLIPAVSKIGKIDEA--------------------------------FRLLNNCVED 351
Query: 448 GCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEA 507
G P Y +I+ CR D+ F ++ M+ +R Y +LI GK +A
Sbjct: 352 GHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDA 411
Query: 508 HDYYIEMQRKGFLPEPKTEQMLQAWL--SGRQGTEGQVTDLE 547
+Y +EM G +P + M+ L G+ ++ LE
Sbjct: 412 ANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRIEQLE 453
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 167/385 (43%), Gaps = 16/385 (4%)
Query: 161 LWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRK 220
LW ++ + + S+++ L + R+FD+ W ++M G + P + +
Sbjct: 152 LWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRG-----LVPDVHIYFVLF 206
Query: 221 YCAVRD--VGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHL--LFCNKNVF 276
C + + G + + + + LCR +++AE + L V
Sbjct: 207 QCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVL 266
Query: 277 PLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVF 336
P + +++ +++G+C + R+A ++ E+ + +VV + +++ + K+ +L
Sbjct: 267 P-NLYTYSAMIDGYCK-TGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTAR 324
Query: 337 QLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPL 396
LF M + P+ VYN +IH K + EAV LL ME N++PDV TY LI L
Sbjct: 325 SLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGL 384
Query: 397 CKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTI 453
C ++ EA +F M I P+ T+++ E E+ +L +M G P I
Sbjct: 385 CIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNI 444
Query: 454 ETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIE 513
T+ LI +C R + ++ M G+ D +Y LI F +KEA Y +
Sbjct: 445 ITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSD 504
Query: 514 MQRKGFLPEPKTEQML--QAWLSGR 536
M G P T L W GR
Sbjct: 505 MLEAGIHPNDHTFACLVDGFWKEGR 529
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 167/405 (41%), Gaps = 51/405 (12%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G +V Y I L + K + A + E+M+ G P+L T MI YC +V
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSA---MIDGYCKTGNV 285
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLE--IKSFNI 285
+A + + F L+ C+ + + A L F + F ++ + +N
Sbjct: 286 RQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSL-FVHMVKFGVDPNLYVYNC 344
Query: 286 ILNGWC---NLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQM 342
+++G C N++ EA + EM + DV +Y +++ ++ + +LF +M
Sbjct: 345 LIHGHCKSGNML----EAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKM 400
Query: 343 KNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKI 402
KN++I P YN++IH K +++A++L M + V P+++T+++LI C R I
Sbjct: 401 KNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDI 460
Query: 403 DEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIML 459
A ++ +M + I P + T+ A E +E L M E G +P T+ L
Sbjct: 461 KAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACL 520
Query: 460 IRKFCRWRKLDEVF----------KIWNM-------------------------MREDGV 484
+ F + +L WN MR G+
Sbjct: 521 VDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGI 580
Query: 485 SHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
+ D SY+ ++ G ++ + +M + G LP Q+L
Sbjct: 581 TPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLL 625
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 143/292 (48%), Gaps = 10/292 (3%)
Query: 241 GFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNV---FPLEIKSFNIILNGWCNLIVSA 297
GF VG+ +++ +++ALC+ + AE +F +K + F L+ +L G+C + +
Sbjct: 190 GFVVGMIDYRTIVNALCKNGYTEAAE--MFMSKILKIGFVLDSHIGTSLLLGFCRGL-NL 246
Query: 298 REAERVWHEMSKR-GIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNA 356
R+A +V+ MSK + VSY+ ++ + +L + F L DQM K P + Y
Sbjct: 247 RDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTV 306
Query: 357 VIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRN 416
+I AL L+ +A NL M P+V TY LI LC++ KI+EA V M+K
Sbjct: 307 LIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDR 366
Query: 417 ITPTIRTFHAFFRILRVEEEV---FELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVF 473
I P++ T++A + V FELL M + C P + T+ L+ CR K +
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAV 426
Query: 474 KIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT 525
+ M ++G+S D SY VLI GL G + A+ M P+ T
Sbjct: 427 HLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLT 478
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 135/290 (46%), Gaps = 14/290 (4%)
Query: 239 RFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIK------SFNIILNGWCN 292
+ GF + LL CR N++DA + +V E+ S++I+++G C
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVF----DVMSKEVTCAPNSVSYSILIHGLCE 278
Query: 293 LIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRK 352
+ EA + +M ++G Q +Y ++ + K F LFD+M + P+
Sbjct: 279 -VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVH 337
Query: 353 VYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDM 412
Y +I L + ++EA + + M K+ + P V+TYN+LI CK+ ++ A E+ M
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM 397
Query: 413 MKRNITPTIRTFHAFFR-ILRVEE--EVFELLDKMRELGCYPTIETYIMLIRKFCRWRKL 469
KR P +RTF+ + RV + + LL +M + G P I +Y +LI CR +
Sbjct: 398 EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHM 457
Query: 470 DEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGF 519
+ +K+ + M + D ++ +I+ GK A + M RKG
Sbjct: 458 NTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGI 507
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 106/492 (21%), Positives = 201/492 (40%), Gaps = 93/492 (18%)
Query: 156 AFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLL 215
A F K+ A + Y +I L ++ + + A+ L + M G PS +T
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPS---TRTYT 305
Query: 216 IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNV 275
++I+ C + +A N F G + + + L+ LCR +++A + C K V
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV--CRKMV 363
Query: 276 ----FPLEIKSFNIILNGWC--NLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKS 329
FP + ++N ++NG+C +V A E V M KR + +V ++ +M +
Sbjct: 364 KDRIFP-SVITYNALINGYCKDGRVVPAFELLTV---MEKRACKPNVRTFNELMEGLCRV 419
Query: 330 SKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDV--- 386
K YK L +M + ++PD YN +I L + + A LL +M ++ PD
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTF 479
Query: 387 --------------------------------VTYNSLIKPLCKNRKIDEAKEVFNDMMK 414
VT +LI +CK K +A + ++K
Sbjct: 480 TAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVK 539
Query: 415 RNITPTIRTFHAFFRIL----RVEEEV--------------------------------- 437
I T + + +L +V+EE+
Sbjct: 540 MRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITG 599
Query: 438 -FELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIH 496
F +L+ M+ GC P + Y ++I C++ +++E K+ + M++ GVS + +Y V++
Sbjct: 600 SFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVK 659
Query: 497 GLFLNGKVKEAHDYYIEMQRKGF-LPEPKTEQMLQAWLSGRQGT----EGQVTDLEHNQL 551
G NGK+ A + M +G+ L + +LQ ++ ++G E V+D+ +
Sbjct: 660 GYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRET 719
Query: 552 EDDTVEKKVKAT 563
+ + + + +
Sbjct: 720 DPECINELISVV 731
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 106/235 (45%), Gaps = 4/235 (1%)
Query: 304 WHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAK 363
+ M G ++ Y +I++ K+ ++ D + +++ +
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCR 242
Query: 364 GRLVKEAVNLLQTMEKN-NVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIR 422
G +++A+ + M K P+ V+Y+ LI LC+ +++EA + + M ++ P+ R
Sbjct: 243 GLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTR 302
Query: 423 TFHAFFRIL---RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMM 479
T+ + L + ++ F L D+M GC P + TY +LI CR K++E + M
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 480 REDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLS 534
+D + +Y LI+G +G+V A + M+++ P +T L L
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLC 417
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 109/254 (42%), Gaps = 19/254 (7%)
Query: 293 LIVSAREAERVWHEMSKR-----------GIQHDVVSYASIMSCYSKSSKLYKVFQLFDQ 341
++ +E R EM K G + + Y+S++ +K + + + +
Sbjct: 126 IVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRR 185
Query: 342 MKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRK 401
M+ Y +++AL K + A + + K D SL+ C+
Sbjct: 186 MEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLN 245
Query: 402 IDEAKEVFNDMMKRNITPTIRT------FHAFFRILRVEEEVFELLDKMRELGCYPTIET 455
+ +A +VF D+M + +T + H + R+EE F L D+M E GC P+ T
Sbjct: 246 LRDALKVF-DVMSKEVTCAPNSVSYSILIHGLCEVGRLEE-AFGLKDQMGEKGCQPSTRT 303
Query: 456 YIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQ 515
Y +LI+ C +D+ F +++ M G + +Y VLI GL +GK++EA+ +M
Sbjct: 304 YTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMV 363
Query: 516 RKGFLPEPKTEQML 529
+ P T L
Sbjct: 364 KDRIFPSVITYNAL 377
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 165/389 (42%), Gaps = 45/389 (11%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G + + Y+ +I L + +TA+ L+ M P +T + I +C
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAI---INAFCKQ--- 489
Query: 228 GRAINTFYAFKRFGFQVGI--DEFQG--LLSALCRYKNVQDAEHLLFCNKNVFPLEI--- 280
G+A + AF + GI DE G L+ +C+ +DA LF + + + I
Sbjct: 490 GKA-DVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDA---LFILETLVKMRILTT 545
Query: 281 -KSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLF 339
S N+IL+ + +E + +++K G+ VV+Y +++ +S + F++
Sbjct: 546 PHSLNVILD-MLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRIL 604
Query: 340 DQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKN 399
+ MK P+ Y +I+ L + V+EA LL M+ + V+P+ VTY ++K N
Sbjct: 605 ELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNN 664
Query: 400 RKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE----------------------EEV 437
K+D A E M++R R + + + + E +
Sbjct: 665 GKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECI 724
Query: 438 FELLDKMREL-GCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIH 496
EL+ + +L GC + I L+ + C+ + DE + + E GV +++ I++
Sbjct: 725 NELISVVEQLGGCISGL--CIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDIIM-E 781
Query: 497 GLFLNGKVKEAHDYYIEMQRKGFLPEPKT 525
K + + + + GF+P K+
Sbjct: 782 SYCSKKKHTKCMELITLVLKSGFVPSFKS 810
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 172/365 (47%), Gaps = 19/365 (5%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G+ Y S+I L + + A L G G P+++ TL+ + + +
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNI 285
+ N G + F L++ LC+ V DA+ L+ +K FP +I +FNI
Sbjct: 411 AQLAN---EMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFP-DIFTFNI 466
Query: 286 ILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNK 345
+++G+ + A + M G+ DV +Y S+++ K+SK V + + M K
Sbjct: 467 LIHGYSTQL-KMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK 525
Query: 346 KITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEA 405
P+ +N ++ +L + R + EA+ LL+ M+ +V PD VT+ +LI CKN +D A
Sbjct: 526 GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGA 585
Query: 406 KEVFNDMMK----RNITPTIRTF-HAFFRILRV--EEEVF-ELLDKMRELGCYPTIETYI 457
+F M + + TPT HAF L V E++F E++D R LG P TY
Sbjct: 586 YTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVD--RCLG--PDGYTYR 641
Query: 458 MLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRK 517
+++ FC+ ++ +K M E+G ++ +I+ L + +V EA M +K
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Query: 518 GFLPE 522
G +PE
Sbjct: 702 GLVPE 706
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 168/385 (43%), Gaps = 41/385 (10%)
Query: 166 QPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYC--- 222
+ G V Y+++I L K KF A + M G P T TL I YC
Sbjct: 279 EQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTL---IAGYCKGG 335
Query: 223 ----AVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVF 276
A R VG A+ + +F ++ L+ LC A L K +
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQF-------TYRSLIDGLCHEGETNRALALFNEALGKGIK 388
Query: 277 PLEIKSFNIILNGWCN--LIVSAREAERVWHEMSKRGIQHDVVSYASI------MSCYSK 328
P + +N ++ G N +I+ EA ++ +EMS++G+ +V ++ + M C S
Sbjct: 389 P-NVILYNTLIKGLSNQGMIL---EAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444
Query: 329 SSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVT 388
+ L KV M +K PD +N +IH + ++ A+ +L M N V PDV T
Sbjct: 445 ADGLVKV------MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYT 498
Query: 389 YNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL---RVEEEVFELLDKMR 445
YNSL+ LCK K ++ E + M+++ P + TF+ L R +E LL++M+
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMK 558
Query: 446 ELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMRED-GVSHDRSSYIVLIHGLFLNGKV 504
P T+ LI FC+ LD + ++ M E VS +Y ++IH V
Sbjct: 559 NKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNV 618
Query: 505 KEAHDYYIEMQRKGFLPEPKTEQML 529
A + EM + P+ T +++
Sbjct: 619 TMAEKLFQEMVDRCLGPDGYTYRLM 643
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 180/417 (43%), Gaps = 21/417 (5%)
Query: 150 RNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLV 209
+ D A F K+ G+ H++ Y S+I LG KF+ ++ MR G ++
Sbjct: 17 QKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMR-ENVGNHML 75
Query: 210 TPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL 269
+ M + Y V A+N F + + + + ++S L D H +
Sbjct: 76 EGVYVGAM-KNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVD-SGYFDQAHKV 133
Query: 270 FC---NKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCY 326
+ ++ + P ++ SF I + +C A R+ + MS +G + +VV+Y +++ +
Sbjct: 134 YMRMRDRGITP-DVYSFTIRMKSFCK-TSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGF 191
Query: 327 SKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDV 386
+ + + ++LF +M ++ +N ++ L K VKE LL + K V P++
Sbjct: 192 YEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNL 251
Query: 387 VTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILR-----VEEEVFELL 441
TYN I+ LC+ ++D A + ++++ P + T++ L E EV+ L
Sbjct: 252 FTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVY--L 309
Query: 442 DKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLN 501
KM G P TY LI +C+ + +I +G D+ +Y LI GL
Sbjct: 310 GKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHE 369
Query: 502 GKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDLEHNQLEDDTVEK 558
G+ A + E KG P L LS +G + LE QL ++ EK
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLS----NQGMI--LEAAQLANEMSEK 420
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 124/296 (41%), Gaps = 19/296 (6%)
Query: 166 QPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVR 225
+ G V+ ++ +++ L KM A L++VM G P + T I+I Y
Sbjct: 419 EKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFN---ILIHGYSTQL 475
Query: 226 DVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL------FCNKNVFPLE 279
+ A+ G + + LL+ LC+ +D C N+F
Sbjct: 476 KMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLF--- 532
Query: 280 IKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLF 339
+FNI+L C EA + EM + + D V++ +++ + K+ L + LF
Sbjct: 533 --TFNILLESLCRY-RKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLF 589
Query: 340 DQMKNK-KITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCK 398
+M+ K++ YN +IHA + V A L Q M + PD TY ++ CK
Sbjct: 590 RKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCK 649
Query: 399 NRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFE---LLDKMRELGCYP 451
++ + +MM+ P++ T L VE+ V+E ++ +M + G P
Sbjct: 650 TGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 113/283 (39%), Gaps = 57/283 (20%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
GY + ++ +I K + A +++VM G P + T +LL + K DV
Sbjct: 456 GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDV 515
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNI 285
+ T+ G + F LL +LCRY+ + +A LL NK+V P + +F
Sbjct: 516 ---METYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP-DAVTFGT 571
Query: 286 ILNGWC----------------------------NLIVSA-------REAERVWHEMSKR 310
+++G+C N+I+ A AE+++ EM R
Sbjct: 572 LIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDR 631
Query: 311 GIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITP--------------DRKVYNA 356
+ D +Y ++ + K+ + ++ +M P + +VY A
Sbjct: 632 CLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEA 691
Query: 357 --VIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLC 397
+IH + + LV EAVN + ++K V + L+K C
Sbjct: 692 AGIIHRMVQKGLVPEAVNTICDVDKKEVAAPKLVLEDLLKKSC 734
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 175/396 (44%), Gaps = 26/396 (6%)
Query: 156 AFTFFLWAGKQPGYA--HSVREYHSMISILGKMRKFDTAWNLIE---VMRGGGT---GPS 207
A F W KQPG H V+ IL + R +D A ++++ +M G + G
Sbjct: 93 ALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGAL 152
Query: 208 LVT-------PQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYK 260
+ T P I+IR Y + ++ F +GF + +L ++ K
Sbjct: 153 MTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSV--VK 210
Query: 261 NVQDAEHLLFCN----KNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDV 316
+ +D F + + P ++ +FNI++N C S ++ + +M K G +
Sbjct: 211 SGEDVSVWSFLKEMLKRKICP-DVATFNILINVLCAE-GSFEKSSYLMQKMEKSGYAPTI 268
Query: 317 VSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQT 376
V+Y +++ Y K + +L D MK+K + D YN +IH L + + + LL+
Sbjct: 269 VTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD 328
Query: 377 MEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE-- 434
M K + P+ VTYN+LI K+ A ++ N+M+ ++P TF+A E
Sbjct: 329 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 388
Query: 435 -EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIV 493
+E ++ M G P+ +Y +L+ C+ + D + M+ +GV R +Y
Sbjct: 389 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 448
Query: 494 LIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
+I GL NG + EA EM + G P+ T L
Sbjct: 449 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSAL 484
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 153/385 (39%), Gaps = 72/385 (18%)
Query: 173 VREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAIN 232
V ++ +I++L F+ + L++ M G P++VT T+L YC AI
Sbjct: 233 VATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL---HWYCKKGRFKAAIE 289
Query: 233 TFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGW 290
K G + + L+ LCR + LL + + P E+ ++N ++NG+
Sbjct: 290 LLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV-TYNTLINGF 348
Query: 291 CN----LIVSA------------------------------REAERVWHEMSKRGIQHDV 316
N LI S +EA ++++ M +G+
Sbjct: 349 SNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSE 408
Query: 317 VSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQT 376
VSY ++ K+++ + +MK + R Y +I L K + EAV LL
Sbjct: 409 VSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE 468
Query: 377 MEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEE 436
M K+ + PD+VTY++LI CK + AKE+ RI RV
Sbjct: 469 MSKDGIDPDIVTYSALINGFCKVGRFKTAKEI------------------VCRIYRV--- 507
Query: 437 VFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIH 496
G P Y LI CR L E +I+ M +G + D ++ VL+
Sbjct: 508 -----------GLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVT 556
Query: 497 GLFLNGKVKEAHDYYIEMQRKGFLP 521
L GKV EA ++ M G LP
Sbjct: 557 SLCKAGKVAEAEEFMRCMTSDGILP 581
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 162/368 (44%), Gaps = 11/368 (2%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y+++I+ K A L+ M G P+ VT L I + + + A+ FY
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNAL---IDGHISEGNFKEALKMFY 397
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF-CNKNVFPLEIKSFNIILNGWC-NL 293
+ G + LL LC+ A +N + ++ +++G C N
Sbjct: 398 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 457
Query: 294 IVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKV 353
+ EA + +EMSK GI D+V+Y+++++ + K + ++ ++ ++P+ +
Sbjct: 458 FLD--EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 515
Query: 354 YNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMM 413
Y+ +I+ + +KEA+ + + M T D T+N L+ LCK K+ EA+E M
Sbjct: 516 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 575
Query: 414 KRNITPTIRTFHAFFRILRVEEE---VFELLDKMRELGCYPTIETYIMLIRKFCRWRKLD 470
I P +F E F + D+M ++G +PT TY L++ C+ L
Sbjct: 576 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 635
Query: 471 EVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQ 530
E K + + D Y L+ + +G + +A + EM ++ LP+ T L
Sbjct: 636 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 695
Query: 531 AWLSGRQG 538
+ L R+G
Sbjct: 696 SGLC-RKG 702
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 159/371 (42%), Gaps = 13/371 (3%)
Query: 166 QPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVR 225
+ G + Y ++I+ K+ +F TA ++ + G P+ + TL I C +
Sbjct: 471 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL---IYNCCRMG 527
Query: 226 DVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFC--NKNVFPLEIKSF 283
+ AI + A G F L+++LC+ V +AE + C + + P + SF
Sbjct: 528 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV-SF 586
Query: 284 NIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMK 343
+ ++NG+ N +A V+ EM+K G +Y S++ K L + + +
Sbjct: 587 DCLINGYGN-SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 645
Query: 344 NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKID 403
D +YN ++ A+ K + +AV+L M + ++ PD TY SLI LC+ K
Sbjct: 646 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 705
Query: 404 EAKEVFNDMMKR-NITPTIRTFHAF----FRILRVEEEVFELLDKMRELGCYPTIETYIM 458
A + R N+ P + F F+ + + ++ ++M LG P I T
Sbjct: 706 IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIY-FREQMDNLGHTPDIVTTNA 764
Query: 459 LIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKG 518
+I + R K+++ + M + ++Y +L+HG V + Y + G
Sbjct: 765 MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNG 824
Query: 519 FLPEPKTEQML 529
LP+ T L
Sbjct: 825 ILPDKLTCHSL 835
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 3/231 (1%)
Query: 310 RGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKE 369
RG++ D ++ ++S + ++ F L M + I+ D+ +A++ L + +E
Sbjct: 858 RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQE 917
Query: 370 AVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFR 429
+ +L M K ++P+ Y LI LC+ I A V +M+ I P A R
Sbjct: 918 SRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVR 977
Query: 430 ILRV---EEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSH 486
L +E LL M ++ PTI ++ L+ C+ + E ++ +M G+
Sbjct: 978 ALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKL 1037
Query: 487 DRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQ 537
D SY VLI GL G + A + Y EM+ GFL T + L L R+
Sbjct: 1038 DLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARE 1088
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/410 (20%), Positives = 169/410 (41%), Gaps = 44/410 (10%)
Query: 160 FLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIR 219
F+ G + + +I+ G + A+++ + M G P+ T +LL +
Sbjct: 570 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 629
Query: 220 KYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFP 277
K +R+ + + + +A V + LL+A+C+ N+ A L +++ P
Sbjct: 630 KGGHLREAEKFLKSLHAVPA---AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 686
Query: 278 LEIKSFNIILNGWCN------LIVSAREAE--------RVWH------------------ 305
+ ++ +++G C I+ A+EAE +V +
Sbjct: 687 -DSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIY 745
Query: 306 ---EMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALA 362
+M G D+V+ +++ YS+ K+ K L +M N+ P+ YN ++H +
Sbjct: 746 FREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYS 805
Query: 363 KGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIR 422
K + V + L +++ N + PD +T +SL+ +C++ ++ ++ + R +
Sbjct: 806 KRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRY 865
Query: 423 TFHAFFRILRVEEEV---FELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMM 479
TF+ E+ F+L+ M LG +T ++ R + E + + M
Sbjct: 866 TFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEM 925
Query: 480 REDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
+ G+S + YI LI+GL G +K A EM P E +
Sbjct: 926 SKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAM 975
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 147/373 (39%), Gaps = 53/373 (14%)
Query: 164 GKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCA 223
G Q G ++ Y+ ++ K + T++ L + G P +T +L++ I C
Sbjct: 786 GNQNG-GPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGI---CE 841
Query: 224 VRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSF 283
+ + AF G +V F L+S C + A L+ + S
Sbjct: 842 SNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKV--------MTSL 893
Query: 284 NIILN-GWCNLIVSA-------REAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKV 335
I L+ C+ +VS +E+ V HEMSK+GI + Y +++ + +
Sbjct: 894 GISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA 953
Query: 336 FQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKP 395
F + ++M KI P +A++ ALAK EA LL+ M K + P + ++ +L+
Sbjct: 954 FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHL 1013
Query: 396 LCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIET 455
CKN + EA E LRV M G + +
Sbjct: 1014 CCKNGNVIEALE-----------------------LRVV---------MSNCGLKLDLVS 1041
Query: 456 YIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYI-EM 514
Y +LI C + F+++ M+ DG + ++Y LI GL D + ++
Sbjct: 1042 YNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDL 1101
Query: 515 QRKGFLPEPKTEQ 527
+GF+ Q
Sbjct: 1102 LARGFITSMSLSQ 1114
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 140/276 (50%), Gaps = 6/276 (2%)
Query: 279 EIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQL 338
+I + + ++NG+C L S ++A V +M K GI+ DVV ++ K+ + ++
Sbjct: 12 DIVTASSLVNGFC-LSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEV 70
Query: 339 FDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCK 398
+MK++ I+P+ Y+++I L K + +A L M+ + P+V+T+++LI K
Sbjct: 71 LKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAK 130
Query: 399 NRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL----RVEEEVFELLDKMRELGCYPTIE 454
K+ + V+ M++ +I P + T+ + L RV+E + ++LD M GC P +
Sbjct: 131 RGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAI-KMLDLMISKGCTPNVV 189
Query: 455 TYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEM 514
TY L F + ++D+ K+ + M + GV+ + S LI G F GK+ A + M
Sbjct: 190 TYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYM 249
Query: 515 QRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDLEHNQ 550
G +P ++ ++ A L E ++ EH Q
Sbjct: 250 TSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQ 285
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 164/340 (48%), Gaps = 16/340 (4%)
Query: 203 GTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNV 262
G P +VT +L + +C + A+ ++ G + + L+ LC+ + V
Sbjct: 8 GIEPDIVTASSL---VNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLV 64
Query: 263 QDAEHLL--FCNKNVFPLEIKSFNIILNGWCNLIVSAR--EAERVWHEMSKRGIQHDVVS 318
A +L ++ + P + +++ ++ G C S R +AER HEM + I +V++
Sbjct: 65 VPALEVLKRMKDRGISP-NVVTYSSLITGLCK---SGRLADAERRLHEMDSKKINPNVIT 120
Query: 319 YASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTME 378
+++++ Y+K KL KV ++ M I P+ Y+++I+ L V EA+ +L M
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180
Query: 379 KNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRT----FHAFFRILRVE 434
TP+VVTY++L K+ ++D+ ++ +DM +R + + +F+ ++
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKI- 239
Query: 435 EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVL 494
+ + M G P I +Y +++ ++++ + M++ D +Y ++
Sbjct: 240 DLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIM 299
Query: 495 IHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLS 534
IHG+ VKEA+D + +++ K P+ K ++ A L+
Sbjct: 300 IHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELN 339
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 155/366 (42%), Gaps = 41/366 (11%)
Query: 156 AFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLL 215
A+ FF+W G Q + H+ YH ++ I + ++ LI+ M G + T L+
Sbjct: 135 AYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI 194
Query: 216 IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNV 275
+ RDV + F K F ++ + +L +L
Sbjct: 195 CTCGEAGLARDV---VEQFIKSKTFNYRPYKHSYNAILHSL------------------- 232
Query: 276 FPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKV 335
L +K + +I W V+ +M + G DV++Y +M + K ++
Sbjct: 233 --LGVKQYKLI--DW------------VYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRL 276
Query: 336 FQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKP 395
++L D+M +PD YN ++H LA G A+NLL M + V P V+ + +LI
Sbjct: 277 YRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDG 336
Query: 396 LCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFR--ILRVE-EEVFELLDKMRELGCYPT 452
L + K++ K ++ +K TP + + I E E+ E+ +M E G P
Sbjct: 337 LSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPN 396
Query: 453 IETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYI 512
+ TY +IR FC K E + M G + + Y L++ L GKV EAH+
Sbjct: 397 VFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVK 456
Query: 513 EMQRKG 518
+M KG
Sbjct: 457 DMVEKG 462
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 102/223 (45%), Gaps = 3/223 (1%)
Query: 302 RVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHAL 361
R+ EM K G ++ ++ ++ V + F + K P + YNA++H+L
Sbjct: 173 RLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSL 232
Query: 362 AKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTI 421
+ K + + M ++ TPDV+TYN ++ + K D + ++M+K +P +
Sbjct: 233 LGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDL 292
Query: 422 RTFHAFFRILRVEEE---VFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNM 478
T++ L + LL+ MRE+G P + + LI R KL+ +
Sbjct: 293 YTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDE 352
Query: 479 MREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
+ G + D Y V+I G G++++A + + EM KG LP
Sbjct: 353 TVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLP 395
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 177/389 (45%), Gaps = 22/389 (5%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G + R Y S+I R D A + + M+ G SLVT ++ K
Sbjct: 339 GITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSK------A 392
Query: 228 GRAINTFYAF---KRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF-CNKNVFPLEIKSF 283
G A Y F KR + + ++ A C+ N++ AE L+ + I +
Sbjct: 393 GHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIY 452
Query: 284 NIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMK 343
+ +++G+ ++ ++ V+ + + G VV+Y +++ Y+K K+ K ++ MK
Sbjct: 453 HTMMDGY-TMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMK 511
Query: 344 NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKID 403
+ + + K Y+ +I+ K + A + + M K + PDV+ YN++I C +D
Sbjct: 512 EEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMD 571
Query: 404 EAKEVFNDMMKRNITPTIRTF----HAFFRI--LRVEEEVFELLDKMRELGCYPTIETYI 457
A + +M K PT RTF H + + +R EVF D MR GC PT+ T+
Sbjct: 572 RAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVF---DMMRRCGCVPTVHTFN 628
Query: 458 MLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRK 517
LI R++++ +I + M GVS + +Y ++ G G +A +Y+ +Q +
Sbjct: 629 GLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNE 688
Query: 518 GFLPEPKT-EQMLQAWL-SGRQGTEGQVT 544
G + T E +L+A SGR + VT
Sbjct: 689 GLDVDIFTYEALLKACCKSGRMQSALAVT 717
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 163/402 (40%), Gaps = 46/402 (11%)
Query: 152 DWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTP 211
DW AF F K+ G V Y+++IS M D A ++ M+ P T
Sbjct: 534 DWANAFAVFEDMVKE-GMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRP---TT 589
Query: 212 QTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL-- 269
+T + +I Y D+ R++ F +R G + F GL++ L + ++ A +L
Sbjct: 590 RTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDE 649
Query: 270 FCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKS 329
V E ++ I+ G+ ++ + + E + + G+ D+ +Y +++ KS
Sbjct: 650 MTLAGVSANE-HTYTKIMQGYASVGDTGKAFE-YFTRLQNEGLDVDIFTYEALLKACCKS 707
Query: 330 SKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTY 389
++ + +M + I + VYN +I A+ V EA +L+Q M+K V PD+ TY
Sbjct: 708 GRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTY 767
Query: 390 NSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGC 449
S I K ++ A + +M LG
Sbjct: 768 TSFISACSKAGDMNRATQTIEEM--------------------------------EALGV 795
Query: 450 YPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHD 509
P I+TY LI+ + R ++ + M+ G+ D++ Y L+ L + EA+
Sbjct: 796 KPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYI 855
Query: 510 YY------IEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTD 545
Y EM G + + T L + + G++T+
Sbjct: 856 YSGVMTICKEMVEAGLIVDMGTAVHWSKCLCKIEASGGELTE 897
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 109/235 (46%), Gaps = 38/235 (16%)
Query: 326 YSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPD 385
Y + +++ + F++M+ + ITP ++Y ++IHA A GR + EA++ ++ M++ +
Sbjct: 319 YGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMS 378
Query: 386 VVTYNSLIKPL-----------------------------------CKNRKIDEAKEVFN 410
+VTY+ ++ C+ ++ A+ +
Sbjct: 379 LVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVR 438
Query: 411 DMMKRNITPTIRTFHAF---FRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWR 467
+M + I I +H + ++ E++ + +++E G PT+ TY LI + +
Sbjct: 439 EMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVG 498
Query: 468 KLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
K+ + ++ +M+E+GV H+ +Y ++I+G A + +M ++G P+
Sbjct: 499 KISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD 553
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 178/384 (46%), Gaps = 17/384 (4%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G A +V + ++I+ K + D A++L +VM G P L+ TL I Y +
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTL---IDGYFKAGML 337
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHL---LFCNKNVFPLEIKSFN 284
G F G ++ + F + + ++ A + + C + + P + ++
Sbjct: 338 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC-QGISP-NVVTYT 395
Query: 285 IILNGWCNLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQM 342
I++ G C R EA ++ ++ KRG++ +V+Y+S++ + K L F L++ M
Sbjct: 396 ILIKGLCQ---DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 343 KNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKI 402
PD +Y ++ L+K L+ A+ M ++ +VV +NSLI C+ +
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 403 DEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIML 459
DEA +VF M I P + TF R+ +E EE L +M ++G P Y L
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTL 572
Query: 460 IRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGF 519
I FC+ K +++++M+ + +S D + V+IH LF ++++A ++ +
Sbjct: 573 IDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM 632
Query: 520 LPEPKT-EQMLQAWLSGRQGTEGQ 542
P+ T M+ + S R+ E +
Sbjct: 633 EPDIVTYNTMICGYCSLRRLDEAE 656
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 161/364 (44%), Gaps = 18/364 (4%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G S+ Y S+I K + + L E M G P +V L+ + K +
Sbjct: 421 GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA 480
Query: 228 GRAINTFYAFKRFG--FQVGIDEFQGLLSALCRYKNVQDAEHL--LFCNKNVFPLEIKSF 283
R ++ K G ++ + F L+ CR +A + L + P ++ +F
Sbjct: 481 MR-----FSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP-DVATF 534
Query: 284 NIILNGWCNLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQ 341
++ I+ R EA ++ M K G++ D ++Y +++ + K K QLFD
Sbjct: 535 TTVMRVS---IMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDL 591
Query: 342 MKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRK 401
M+ KI+ D V N VIH L K +++A + + + PD+VTYN++I C R+
Sbjct: 592 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 651
Query: 402 IDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEV---FELLDKMRELGCYPTIETYIM 458
+DEA+ +F + P T +L ++ + M E G P TY
Sbjct: 652 LDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGC 711
Query: 459 LIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKG 518
L+ F + ++ FK++ M+E G+S SY ++I GL G+V EA + + +
Sbjct: 712 LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAK 771
Query: 519 FLPE 522
LP+
Sbjct: 772 LLPD 775
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 171/394 (43%), Gaps = 22/394 (5%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G V + S I + K TA + + M G P++VT I+I+ C +
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT---ILIKGLCQDGRI 407
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDA----EHLLFCNKNVFPLEIKSF 283
A + + G + I + L+ C+ N++ E ++ K +P ++ +
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI---KMGYPPDVVIY 464
Query: 284 NIILNGWC--NLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQ 341
++++G L++ A R +M + I+ +VV + S++ + + ++ + ++F
Sbjct: 465 GVLVDGLSKQGLML---HAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 342 MKNKKITPDRKVYNAVIH-ALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNR 400
M I PD + V+ ++ +GRL +EA+ L M K + PD + Y +LI CK+
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEGRL-EEALFLFFRMFKMGLEPDALAYCTLIDAFCKHM 580
Query: 401 KIDEAKEVFNDMMKRNITPTIRT----FHAFFRILRVEEEVFELLDKMRELGCYPTIETY 456
K ++F+ M + I+ I H F+ R+E+ + + + E P I TY
Sbjct: 581 KPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDAS-KFFNNLIEGKMEPDIVTY 639
Query: 457 IMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQR 516
+I +C R+LDE +I+ +++ + + +LIH L N + A + M
Sbjct: 640 NTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE 699
Query: 517 KGFLPEPKTEQMLQAWLSGRQGTEGQVTDLEHNQ 550
KG P T L W S EG E Q
Sbjct: 700 KGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ 733
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 115/269 (42%), Gaps = 11/269 (4%)
Query: 154 EAAFTFF--LWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTP 211
EA F FF G +P Y ++I K K L ++M+ +
Sbjct: 549 EALFLFFRMFKMGLEP----DALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVC 604
Query: 212 QTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL-F 270
++ ++ K + D + N K + I + ++ C + + +AE +
Sbjct: 605 NVVIHLLFKCHRIEDASKFFNNLIEGK---MEPDIVTYNTMICGYCSLRRLDEAERIFEL 661
Query: 271 CNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSS 330
F + I+++ C A R++ M+++G + + V+Y +M +SKS
Sbjct: 662 LKVTPFGPNTVTLTILIHVLCK-NNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSV 720
Query: 331 KLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYN 390
+ F+LF++M+ K I+P Y+ +I L K V EA N+ + PDVV Y
Sbjct: 721 DIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYA 780
Query: 391 SLIKPLCKNRKIDEAKEVFNDMMKRNITP 419
LI+ CK ++ EA ++ M++ + P
Sbjct: 781 ILIRGYCKVGRLVEAALLYEHMLRNGVKP 809
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/352 (19%), Positives = 141/352 (40%), Gaps = 72/352 (20%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
+V ++S+I ++ +FD A + +M G P + T T++ R + A+
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM---RVSIMEGRLEEAL 551
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRY--------------KNVQDAE--------HLL 269
F+ + G + + L+ A C++ +N A+ HLL
Sbjct: 552 FLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 611
Query: 270 F-CNK-------------NVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHD 315
F C++ +I ++N ++ G+C+L EAER++ + +
Sbjct: 612 FKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL-RRLDEAERIFELLKVTPFGPN 670
Query: 316 VVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQ 375
V+ ++ K++ + ++F M K P+ Y ++ +K ++ + L +
Sbjct: 671 TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 730
Query: 376 TMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEE 435
M++ ++P +V+Y+ +I LCK ++DEA +F+ + +
Sbjct: 731 EMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLL----------------- 773
Query: 436 EVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHD 487
P + Y +LIR +C+ +L E ++ M +GV D
Sbjct: 774 ---------------PDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 94/221 (42%), Gaps = 9/221 (4%)
Query: 303 VWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFD-QMKNKKITPDRKVYNAVIHAL 361
V + R + DV + +M C + + K ++F + + P VY ++++L
Sbjct: 135 VLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYR-MLNSL 191
Query: 362 AKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLI--KPLCKNRKIDEAKEVFNDMMKRNITP 419
V + + + + P V+ + + CK ++ +A + +M+R
Sbjct: 192 IGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKG-EVTKALDFHRLVMERGFRV 250
Query: 420 TIRTFHAFFRILRVE--EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWN 477
I + + + L V+ E LL + + G P + T+ LI FC+ ++D F ++
Sbjct: 251 GIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFK 310
Query: 478 MMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKG 518
+M + G+ D +Y LI G F G + H + + KG
Sbjct: 311 VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 158/349 (45%), Gaps = 14/349 (4%)
Query: 188 KFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGID 247
KF+ A L M PS+V LLI I K V I+ F + G +
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAV---ISLFRHLEMLGISHDLY 115
Query: 248 EFQGLLSALCRYKNVQDAEHLLFCNKNVFPL----EIKSFNIILNGWCNLIVSAREAERV 303
F L+ CR + A L C + L I +F ++NG+C+ + EA +
Sbjct: 116 SFTTLIDCFCRCARLSLA---LSCLGKMMKLGFEPSIVTFGSLVNGFCH-VNRFYEAMSL 171
Query: 304 WHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAK 363
++ G + +VV Y +I+ + ++ + MK I PD YN++I L
Sbjct: 172 VDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFH 231
Query: 364 GRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRT 423
+ +L M + ++PDV+T+++LI K ++ EAK+ +N+M++R++ P I T
Sbjct: 232 SGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVT 291
Query: 424 FHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMR 480
+++ L + +E ++L+ + G +P TY LI +C+ +++D+ KI +M
Sbjct: 292 YNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMS 351
Query: 481 EDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
DGV D +Y L G GK A M G P+ T +L
Sbjct: 352 RDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNIL 400
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 185/413 (44%), Gaps = 49/413 (11%)
Query: 151 NDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVT 210
N +EA + F + G +H + + ++I + + A + + M G PS+VT
Sbjct: 93 NKYEAVISLFRHL-EMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVT 151
Query: 211 PQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF 270
+L + +C V A++ G++ + + ++ +LC V A +L
Sbjct: 152 FGSL---VNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVL- 207
Query: 271 CNKNVFPLEIKSFNIILNGWCNLIVSARE---AERVWHEMSKRGIQHDVVSYASIMSCYS 327
K++ + I+ + N + + + R+ +M + GI DV+++++++ Y
Sbjct: 208 --KHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYG 265
Query: 328 KSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVV 387
K +L + + +++M + + P+ YN++I+ L L+ EA +L + P+ V
Sbjct: 266 KEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAV 325
Query: 388 TYNSLIKPLCKNRKIDE-----------------------------------AKEVFNDM 412
TYN+LI CK +++D+ A++V M
Sbjct: 326 TYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRM 385
Query: 413 MKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPT---IETYIMLIRKFCRWRKL 469
+ + P + TF+ L ++ + L ++ +L T I TY ++I+ C+ K+
Sbjct: 386 VSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKV 445
Query: 470 DEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRK-GFLP 521
++ + ++ + GVS D +YI ++ GL +EAH+ Y +MQ++ G +P
Sbjct: 446 EDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 166/387 (42%), Gaps = 33/387 (8%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
GY H + M+ L KF A +LI M+ +V+ LL + R Y V
Sbjct: 46 GYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMK---IENCVVSEDILLSICRGYGRVHRP 102
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCR----------YKNVQDAEHLLFCNKNVFP 277
++ F+ K F + +L+ L YKN+++ P
Sbjct: 103 FDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIG---------LP 153
Query: 278 LEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQ 337
+ S N+++ C + +++ EM KRG D +Y +++S + ++ + +
Sbjct: 154 PTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKK 213
Query: 338 LFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLC 397
LF +M K P Y ++I+ L + V EA+ L+ M+ + P+V TY+SL+ LC
Sbjct: 214 LFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLC 273
Query: 398 KNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIE 454
K+ + +A E+F MM R P + T+ L E +E ELLD+M G P
Sbjct: 274 KDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAG 333
Query: 455 TYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIV-------LIHGLFLNGKVKEA 507
Y +I FC K E + M G++ +R ++ + ++ GL N + A
Sbjct: 334 LYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSR-A 392
Query: 508 HDYYIEMQRKGFLPEPKTEQMLQAWLS 534
Y+ M+ +G E +T + L L
Sbjct: 393 FTLYLSMRSRGISVEVETLESLVKCLC 419
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 153/349 (43%), Gaps = 15/349 (4%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
S + Y ++++IL + + + A+ + MR G P++ + L+ + + D G I
Sbjct: 120 SQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKI 179
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNG 289
F + G + L+S LCR+ + +A+ L K+ P + ++ ++NG
Sbjct: 180 --FLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAP-TVVTYTSLING 236
Query: 290 WCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITP 349
C + EA R EM +GI+ +V +Y+S+M K + + +LF+ M + P
Sbjct: 237 LCG-SKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRP 295
Query: 350 DRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVF 409
+ Y +I L K + ++EAV LL M + PD Y +I C K EA
Sbjct: 296 NMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFL 355
Query: 410 NDMMKRNITPT-------IRTFHAFFRILRVE--EEVFELLDKMRELGCYPTIETYIMLI 460
++M+ ITP ++T + R L F L MR G +ET L+
Sbjct: 356 DEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLV 415
Query: 461 RKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHD 509
+ C+ + + ++ + + DG + ++ +LI V EA D
Sbjct: 416 KCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASD 464
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 136/308 (44%), Gaps = 16/308 (5%)
Query: 294 IVSAREAERVWHEMSKRGIQHDVVS---YASIMSCYSKSSKLYKVFQLFDQMKNKKITPD 350
+VSA + + + + I++ VVS SI Y + + + ++F +MK+ P
Sbjct: 61 LVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPS 120
Query: 351 RKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNR-KIDEAKEVF 409
+K Y V+ L + + A + M + + P V + N LIK LC+N +D ++F
Sbjct: 121 QKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIF 180
Query: 410 NDMMKRNITPTIRTF----HAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCR 465
+M KR P T+ R R++E +L +M E C PT+ TY LI C
Sbjct: 181 LEMPKRGCDPDSYTYGTLISGLCRFGRIDE-AKKLFTEMVEKDCAPTVVTYTSLINGLCG 239
Query: 466 WRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT 525
+ +DE + M+ G+ + +Y L+ GL +G+ +A + + M +G P T
Sbjct: 240 SKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVT 299
Query: 526 EQMLQAWLSGRQGTEGQVTDLEHNQLE----DDTVEKKVKA---TPSKFDKEKAFLREPE 578
L L Q + V L+ L+ D + KV + SKF + FL E
Sbjct: 300 YTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMI 359
Query: 579 TRRVTRDR 586
+T +R
Sbjct: 360 LGGITPNR 367
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 90/223 (40%), Gaps = 13/223 (5%)
Query: 160 FLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIR 219
+L K G +V Y S++ L K + A L E+M G P++VT TL I
Sbjct: 249 YLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTL---IT 305
Query: 220 KYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--------FC 271
C + + A+ G + + ++S C ++A + L
Sbjct: 306 GLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITP 365
Query: 272 NKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSK 331
N+ + + +K+ N ++ G C S A ++ M RGI +V + S++ C K +
Sbjct: 366 NRLTWNIHVKTSNEVVRGLCANYPS--RAFTLYLSMRSRGISVEVETLESLVKCLCKKGE 423
Query: 332 LYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLL 374
K QL D++ P + + +I +V EA + L
Sbjct: 424 FQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTL 466
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 165/371 (44%), Gaps = 26/371 (7%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIE--VMRGGGTGPSLVTPQTLLIMIRKYCAVR 225
G+ + + S+I +L FD+A + ++R G L+T +I C
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT-----LISGLCKHG 484
Query: 226 DVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFP----LEIK 281
+A+ ++ F GF V LL LC + +A + K + ++
Sbjct: 485 KHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI---QKEILGRGCVMDRV 541
Query: 282 SFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQ 341
S+N +++G C EA EM KRG++ D +Y+ ++ +K+ + Q +D
Sbjct: 542 SYNTLISGCCGK-KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDD 600
Query: 342 MKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRK 401
K + PD Y+ +I K +E M NV P+ V YN LI+ C++ +
Sbjct: 601 CKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGR 660
Query: 402 IDEAKEVFNDMMKRNITPTIRTFHAFFR----ILRVEEEVFELLDKMRELGCYPTIETYI 457
+ A E+ DM + I+P T+ + + I RVEE L ++MR G P + Y
Sbjct: 661 LSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKL-LFEEMRMEGLEPNVFHYT 719
Query: 458 MLIRKFCRWRKLDEVFKIWNMMRE---DGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEM 514
LI + KL ++ K+ ++RE V ++ +Y V+I G +G V EA EM
Sbjct: 720 ALIDG---YGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776
Query: 515 QRKGFLPEPKT 525
+ KG +P+ T
Sbjct: 777 REKGIVPDSIT 787
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 148/315 (46%), Gaps = 15/315 (4%)
Query: 252 LLSALCRYKNVQDAEHL--LFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSK 309
L+S LC++ A L F NK F ++ ++ N +L+G C EA R+ E+
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKG-FVVDTRTSNALLHGLCE-AGKLDEAFRIQKEILG 533
Query: 310 RGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKE 369
RG D VSY +++S KL + F D+M + + PD Y+ +I L V+E
Sbjct: 534 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 370 AVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFH---- 425
A+ ++N + PDV TY+ +I CK + +E +E F++MM +N+ P ++
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 426 AFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVS 485
A+ R R+ EL + M+ G P TY LI+ +++E ++ MR +G+
Sbjct: 654 AYCRSGRL-SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLE 712
Query: 486 HDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTD 545
+ Y LI G G++ + EM K P T + + G +G VT
Sbjct: 713 PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV----MIGGYARDGNVT- 767
Query: 546 LEHNQLEDDTVEKKV 560
E ++L ++ EK +
Sbjct: 768 -EASRLLNEMREKGI 781
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 172/432 (39%), Gaps = 80/432 (18%)
Query: 165 KQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAV 224
++ G A +V ++++I LG ++D A+ E M G P+L+T I+++
Sbjct: 287 EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYS---ILVKGLTRA 343
Query: 225 RDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHL--LFCNKNVFPLEIKS 282
+ +G A + GF + + L+ + ++ A + L +K + L +
Sbjct: 344 KRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL-SLTSST 402
Query: 283 FNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIM------------------- 323
+N ++ G+C A AER+ EM G + S+ S++
Sbjct: 403 YNTLIKGYCK-NGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 461
Query: 324 ----------------SCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLV 367
S K K K +L+ Q NK D + NA++H L + +
Sbjct: 462 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 521
Query: 368 KEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFH-- 425
EA + + + D V+YN+LI C +K+DEA ++M+KR + P T+
Sbjct: 522 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 581
Query: 426 --AFFRILRVE----------------------------------EEVFELLDKMRELGC 449
F + +VE EE E D+M
Sbjct: 582 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV 641
Query: 450 YPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHD 509
P Y LIR +CR +L ++ M+ G+S + ++Y LI G+ + +V+EA
Sbjct: 642 QPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKL 701
Query: 510 YYIEMQRKGFLP 521
+ EM+ +G P
Sbjct: 702 LFEEMRMEGLEP 713
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 143/334 (42%), Gaps = 18/334 (5%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G+ R ++++ L + K D A+ + + + G G V+ TL I C + +
Sbjct: 500 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL---ISGCCGKKKL 556
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF-CNKNVFPLEIKSFNII 286
A + G + + L+ L V++A C +N ++ +++++
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 287 LNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKK 346
++G C E + + EM + +Q + V Y ++ Y +S +L +L + MK+K
Sbjct: 617 IDGCCK-AERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Query: 347 ITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAK 406
I+P+ Y ++I ++ V+EA L + M + P+V Y +LI K ++ + +
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 735
Query: 407 EVFNDMMKRNITPTIRTFHAFFRILRVEEEVFE---LLDKMRELGCYPTIETYIMLIRKF 463
+ +M +N+ P T+ + V E LL++MRE G P TY I +
Sbjct: 736 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 795
Query: 464 CRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHG 497
+ + E FK D +Y +I G
Sbjct: 796 LKQGGVLEAFK----------GSDEENYAAIIEG 819
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 128/299 (42%), Gaps = 47/299 (15%)
Query: 272 NKNVFPLEIKSFNIILNGWCNLIVSAREAERVWH--EMSKRGIQHDVVSYASIMSCYSKS 329
NK +FP + + NI+L +V A E ++ ++ +G+ DV + + ++ + K
Sbjct: 219 NKGMFPSK-TTCNILLTS----LVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKG 273
Query: 330 SKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTY 389
K+ + +LF +M+ + P+ +N VI L EA + M + + P ++TY
Sbjct: 274 GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITY 333
Query: 390 NSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFH----AFFRILRVEEEVFELLDKMR 445
+ L+K L + ++I +A V +M K+ P + ++ +F + + + E+ D M
Sbjct: 334 SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI-EIKDLMV 392
Query: 446 ELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSY-------------- 491
G T TY LI+ +C+ + D ++ M G + ++ S+
Sbjct: 393 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 452
Query: 492 ---------------------IVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
LI GL +GK +A + + + KGF+ + +T L
Sbjct: 453 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 94/230 (40%), Gaps = 39/230 (16%)
Query: 328 KSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVV 387
K Y +F + NK + P + N ++ +L + ++ + K V+PDV
Sbjct: 203 KRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKG-VSPDVY 261
Query: 388 TYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRV---EEEVFELLDKM 444
+ + I CK K++EA ++F+ M + + P + TF+ L + +E F +KM
Sbjct: 262 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 321
Query: 445 RELGCYPTIETYIMLIRKFCRWRK-----------------------------------L 469
E G PT+ TY +L++ R ++ L
Sbjct: 322 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 381
Query: 470 DEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGF 519
++ +I ++M G+S S+Y LI G NG+ A EM GF
Sbjct: 382 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 431
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 165/371 (44%), Gaps = 26/371 (7%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIE--VMRGGGTGPSLVTPQTLLIMIRKYCAVR 225
G+ + + S+I +L FD+A + ++R G L+T +I C
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT-----LISGLCKHG 484
Query: 226 DVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFP----LEIK 281
+A+ ++ F GF V LL LC + +A + K + ++
Sbjct: 485 KHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI---QKEILGRGCVMDRV 541
Query: 282 SFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQ 341
S+N +++G C EA EM KRG++ D +Y+ ++ +K+ + Q +D
Sbjct: 542 SYNTLISGCCGK-KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDD 600
Query: 342 MKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRK 401
K + PD Y+ +I K +E M NV P+ V YN LI+ C++ +
Sbjct: 601 CKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGR 660
Query: 402 IDEAKEVFNDMMKRNITPTIRTFHAFFR----ILRVEEEVFELLDKMRELGCYPTIETYI 457
+ A E+ DM + I+P T+ + + I RVEE L ++MR G P + Y
Sbjct: 661 LSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKL-LFEEMRMEGLEPNVFHYT 719
Query: 458 MLIRKFCRWRKLDEVFKIWNMMRE---DGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEM 514
LI + KL ++ K+ ++RE V ++ +Y V+I G +G V EA EM
Sbjct: 720 ALIDG---YGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776
Query: 515 QRKGFLPEPKT 525
+ KG +P+ T
Sbjct: 777 REKGIVPDSIT 787
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 148/315 (46%), Gaps = 15/315 (4%)
Query: 252 LLSALCRYKNVQDAEHL--LFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSK 309
L+S LC++ A L F NK F ++ ++ N +L+G C EA R+ E+
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKG-FVVDTRTSNALLHGLCE-AGKLDEAFRIQKEILG 533
Query: 310 RGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKE 369
RG D VSY +++S KL + F D+M + + PD Y+ +I L V+E
Sbjct: 534 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 370 AVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFH---- 425
A+ ++N + PDV TY+ +I CK + +E +E F++MM +N+ P ++
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 426 AFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVS 485
A+ R R+ EL + M+ G P TY LI+ +++E ++ MR +G+
Sbjct: 654 AYCRSGRL-SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLE 712
Query: 486 HDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTD 545
+ Y LI G G++ + EM K P T + + G +G VT
Sbjct: 713 PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV----MIGGYARDGNVT- 767
Query: 546 LEHNQLEDDTVEKKV 560
E ++L ++ EK +
Sbjct: 768 -EASRLLNEMREKGI 781
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 172/432 (39%), Gaps = 80/432 (18%)
Query: 165 KQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAV 224
++ G A +V ++++I LG ++D A+ E M G P+L+T I+++
Sbjct: 287 EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYS---ILVKGLTRA 343
Query: 225 RDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHL--LFCNKNVFPLEIKS 282
+ +G A + GF + + L+ + ++ A + L +K + L +
Sbjct: 344 KRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL-SLTSST 402
Query: 283 FNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIM------------------- 323
+N ++ G+C A AER+ EM G + S+ S++
Sbjct: 403 YNTLIKGYCK-NGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 461
Query: 324 ----------------SCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLV 367
S K K K +L+ Q NK D + NA++H L + +
Sbjct: 462 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 521
Query: 368 KEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFH-- 425
EA + + + D V+YN+LI C +K+DEA ++M+KR + P T+
Sbjct: 522 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 581
Query: 426 --AFFRILRVE----------------------------------EEVFELLDKMRELGC 449
F + +VE EE E D+M
Sbjct: 582 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV 641
Query: 450 YPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHD 509
P Y LIR +CR +L ++ M+ G+S + ++Y LI G+ + +V+EA
Sbjct: 642 QPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKL 701
Query: 510 YYIEMQRKGFLP 521
+ EM+ +G P
Sbjct: 702 LFEEMRMEGLEP 713
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 143/334 (42%), Gaps = 18/334 (5%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G+ R ++++ L + K D A+ + + + G G V+ TL I C + +
Sbjct: 500 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL---ISGCCGKKKL 556
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF-CNKNVFPLEIKSFNII 286
A + G + + L+ L V++A C +N ++ +++++
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 287 LNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKK 346
++G C E + + EM + +Q + V Y ++ Y +S +L +L + MK+K
Sbjct: 617 IDGCCK-AERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Query: 347 ITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAK 406
I+P+ Y ++I ++ V+EA L + M + P+V Y +LI K ++ + +
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 735
Query: 407 EVFNDMMKRNITPTIRTFHAFFRILRVEEEVFE---LLDKMRELGCYPTIETYIMLIRKF 463
+ +M +N+ P T+ + V E LL++MRE G P TY I +
Sbjct: 736 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 795
Query: 464 CRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHG 497
+ + E FK D +Y +I G
Sbjct: 796 LKQGGVLEAFK----------GSDEENYAAIIEG 819
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 128/299 (42%), Gaps = 47/299 (15%)
Query: 272 NKNVFPLEIKSFNIILNGWCNLIVSAREAERVWH--EMSKRGIQHDVVSYASIMSCYSKS 329
NK +FP + + NI+L +V A E ++ ++ +G+ DV + + ++ + K
Sbjct: 219 NKGMFPSK-TTCNILLTS----LVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKG 273
Query: 330 SKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTY 389
K+ + +LF +M+ + P+ +N VI L EA + M + + P ++TY
Sbjct: 274 GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITY 333
Query: 390 NSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFH----AFFRILRVEEEVFELLDKMR 445
+ L+K L + ++I +A V +M K+ P + ++ +F + + + E+ D M
Sbjct: 334 SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI-EIKDLMV 392
Query: 446 ELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSY-------------- 491
G T TY LI+ +C+ + D ++ M G + ++ S+
Sbjct: 393 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 452
Query: 492 ---------------------IVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
LI GL +GK +A + + + KGF+ + +T L
Sbjct: 453 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 94/230 (40%), Gaps = 39/230 (16%)
Query: 328 KSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVV 387
K Y +F + NK + P + N ++ +L + ++ + K V+PDV
Sbjct: 203 KRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKG-VSPDVY 261
Query: 388 TYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRV---EEEVFELLDKM 444
+ + I CK K++EA ++F+ M + + P + TF+ L + +E F +KM
Sbjct: 262 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 321
Query: 445 RELGCYPTIETYIMLIRKFCRWRK-----------------------------------L 469
E G PT+ TY +L++ R ++ L
Sbjct: 322 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 381
Query: 470 DEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGF 519
++ +I ++M G+S S+Y LI G NG+ A EM GF
Sbjct: 382 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 431
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 162/362 (44%), Gaps = 13/362 (3%)
Query: 152 DWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTP 211
D E A + F ++ G+ H Y S+I L K R FD ++ ++R ++
Sbjct: 61 DPEEALSLF-HQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRY----RNVRCR 115
Query: 212 QTLLI-MIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF 270
++L + +I+ Y V +AI+ F+ F I L++ L ++ A+
Sbjct: 116 ESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFD 175
Query: 271 CNKN--VFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSK 328
K+ + P + SFNI++ G+ + A +V+ EM + +Q VV+Y S++ +
Sbjct: 176 GAKDMRLRPNSV-SFNILIKGFLDK-CDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCR 233
Query: 329 SSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVT 388
+ + K L + M K+I P+ + ++ L EA L+ ME P +V
Sbjct: 234 NDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVN 293
Query: 389 YNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMR 445
Y L+ L K +IDEAK + +M KR I P + ++ L E E + +L +M+
Sbjct: 294 YGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQ 353
Query: 446 ELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVK 505
GC P TY M+I FCR D + N M ++++ ++ GL G +
Sbjct: 354 MKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLD 413
Query: 506 EA 507
A
Sbjct: 414 HA 415
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 142/317 (44%), Gaps = 19/317 (5%)
Query: 224 VRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF--------CNKNV 275
+ D A++ F+ ++ GF+ + L+ L + +N + +L C +++
Sbjct: 59 IEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESL 118
Query: 276 FPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKV 335
F I+ + S +A V+H+++ + S ++++ + +L K
Sbjct: 119 FMGLIQHYG--------KAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKA 170
Query: 336 FQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKP 395
FD K+ ++ P+ +N +I + A + M + V P VVTYNSLI
Sbjct: 171 KSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGF 230
Query: 396 LCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFE---LLDKMRELGCYPT 452
LC+N + +AK + DM+K+ I P TF + L + E E L+ M GC P
Sbjct: 231 LCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPG 290
Query: 453 IETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYI 512
+ Y +L+ + ++DE + M++ + D Y +L++ L +V EA+
Sbjct: 291 LVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLT 350
Query: 513 EMQRKGFLPEPKTEQML 529
EMQ KG P T +M+
Sbjct: 351 EMQMKGCKPNAATYRMM 367
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 107/252 (42%), Gaps = 12/252 (4%)
Query: 150 RNDWEAAFTFF---LWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGP 206
+ DWEAA F L QP SV Y+S+I L + A +L+E M P
Sbjct: 199 KCDWEAACKVFDEMLEMEVQP----SVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRP 254
Query: 207 SLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAE 266
+ VT ++++ C + A + + G + G+ + L+S L + + +A+
Sbjct: 255 NAVT---FGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAK 311
Query: 267 HLLF-CNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSC 325
LL K ++ +NI++N C EA RV EM +G + + +Y ++
Sbjct: 312 LLLGEMKKRRIKPDVVIYNILVNHLCTE-CRVPEAYRVLTEMQMKGCKPNAATYRMMIDG 370
Query: 326 YSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPD 385
+ + + + M + P + ++ L KG + A +L+ M K N++
Sbjct: 371 FCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFG 430
Query: 386 VVTYNSLIKPLC 397
+ +L+ LC
Sbjct: 431 SGAWQNLLSDLC 442
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 163/355 (45%), Gaps = 43/355 (12%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
S+ +++++ L K + A N+++ M+ G P T I+ Y + A+
Sbjct: 283 SLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFT---FSILFDGYSSNEKAEAAL 339
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF--CNKNVFPLEIKSFNIILNG 289
+ G ++ LL+ALC+ ++ AE +L K + P E+ +N +++G
Sbjct: 340 GVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEV-IYNTMIDG 398
Query: 290 WC--NLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKI 347
+C +V AR M K+G++ D ++Y ++ + + ++ + ++MK K +
Sbjct: 399 YCRKGDLVGARMK---IEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGV 455
Query: 348 TPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKE 407
+P + YN +I + + ++L+ ME N P+VV+Y +LI LCK K+ EA+
Sbjct: 456 SPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI 515
Query: 408 VFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWR 467
V DM R ++P +R ++ MLI C
Sbjct: 516 VKRDMEDRGVSPKVRIYN--------------------------------MLIDGCCSKG 543
Query: 468 KLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
K+++ F+ M + G+ + +Y LI GL + GK+ EA D +E+ RKG P+
Sbjct: 544 KIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPD 598
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 166/388 (42%), Gaps = 51/388 (13%)
Query: 179 MISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFK 238
+++ L K K + A ++ G P+ V T MI YC D+ A A +
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNT---MIDGYCRKGDLVGARMKIEAME 416
Query: 239 RFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCNLIVS 296
+ G + + L+ C +++AE + K V P ++++NI++ G+
Sbjct: 417 KQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSP-SVETYNILIGGY------ 469
Query: 297 AREAE-----RVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDR 351
R+ E + EM G +VVSY ++++C K SKL + + M+++ ++P
Sbjct: 470 GRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKV 529
Query: 352 KVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFND 411
++YN +I +++A + M K + ++VTYN+LI L K+ EA+++ +
Sbjct: 530 RIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLE 589
Query: 412 MMKRNITPTIRTFHAFFRILRVEEEV---FELLDKMRELGCYPTIETYIMLI-------- 460
+ ++ + P + T+++ V L ++M+ G PT++TY +LI
Sbjct: 590 ISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGI 649
Query: 461 ----RKFCRWR-------------------KLDEVFKIWNMMREDGVSHDRSSYIVLIHG 497
R F +++ F + M E + D+++Y LI G
Sbjct: 650 ELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILG 709
Query: 498 LFLNGKVKEAHDYYIEMQRKGFLPEPKT 525
GK+ E EM + PE T
Sbjct: 710 QLKVGKLCEVRSLIDEMNAREMEPEADT 737
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 180/405 (44%), Gaps = 48/405 (11%)
Query: 165 KQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAV 224
K G + SV Y+ +I G+ +FD +++++ M GT P++V+ TL
Sbjct: 451 KLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTL---------- 500
Query: 225 RDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFN 284
IN + LL A ++++D + V P +++ +N
Sbjct: 501 ------INCLCKGSK------------LLEAQIVKRDMED--------RGVSP-KVRIYN 533
Query: 285 IILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKN 344
++++G C+ +A R EM K+GI+ ++V+Y +++ S + KL + L ++
Sbjct: 534 MLIDGCCS-KGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISR 592
Query: 345 KKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDE 404
K + PD YN++I V+ + L + M+++ + P + TY+ LI LC I+
Sbjct: 593 KGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIEL 651
Query: 405 AKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIMLIR 461
+ +F +M ++ P + ++ V E+ F L +M E TY LI
Sbjct: 652 TERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLIL 708
Query: 462 KFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
+ KL EV + + M + + +Y +++ G A+ +Y EMQ KGFL
Sbjct: 709 GQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLL 768
Query: 522 EPKTEQMLQAWLSGR---QGTEGQVTDLEHNQLEDDTVEKKVKAT 563
+ L + L + E ++++ L D TV++ + AT
Sbjct: 769 DVCIGNELVSGLKEEWRSKEAEIVISEMNGRMLGDVTVDEDLSAT 813
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 132/288 (45%), Gaps = 32/288 (11%)
Query: 252 LLSALC-RYKNVQDAEHLLFC--NKNVFP------------LEIKSFNIILNGWCNLIVS 296
LLS L K + +A L F N+ ++P ++ K F + +N + N++ S
Sbjct: 114 LLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILES 173
Query: 297 AREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNA 356
+ M + IQ V K S + K +LF++MK+ +I P +YN
Sbjct: 174 DFRPSKF---MYGKAIQAAV-----------KLSDVGKGLELFNRMKHDRIYPSVFIYNV 219
Query: 357 VIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRN 416
+I L KG+ + +A L M + P ++TYN+LI CK +++ +V M +
Sbjct: 220 LIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADH 279
Query: 417 ITPTIRTFHAFFRIL---RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVF 473
I P++ TF+ + L + E+ +L +M++LG P T+ +L + K +
Sbjct: 280 IEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAAL 339
Query: 474 KIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
++ + GV + + +L++ L GK+++A + KG +P
Sbjct: 340 GVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVP 387
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 104/245 (42%), Gaps = 32/245 (13%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
EA ++ + GI S ++ K+ + +F + P + +Y I
Sbjct: 127 EAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAI 186
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
A K V + + L M+ + + P V YN LI LCK +++++A+++F++M+ R +
Sbjct: 187 QAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLL 246
Query: 419 PTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNM 478
P++ T++ LI +C+ ++ FK+
Sbjct: 247 PSLITYNT--------------------------------LIDGYCKAGNPEKSFKVRER 274
Query: 479 MREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQG 538
M+ D + ++ L+ GLF G V++A + EM+ GF+P+ T +L S +
Sbjct: 275 MKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEK 334
Query: 539 TEGQV 543
E +
Sbjct: 335 AEAAL 339
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 191/441 (43%), Gaps = 59/441 (13%)
Query: 149 IRNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFD-TAWNLIEVMRGGGTG-- 205
+R + EA F A KQ + + Y M+ IL + R + T L E++ +G
Sbjct: 80 LRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGFV 139
Query: 206 --PSLV--------TPQTLLIMIRKYCAVRDVGRAINTFYAFKRFG-------------- 241
LV +P ++++ Y V A++ F +G
Sbjct: 140 VWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSN 199
Query: 242 -------------------FQVGIDEFQG--LLSALCRYKNVQDAEHLLFCNKNVFPLEI 280
F+V D F +++A CR NV A ++ LE+
Sbjct: 200 LVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLEL 259
Query: 281 K--SFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQL 338
++N ++NG+ +I RV MS+RG+ +VV+Y S++ Y K + + +
Sbjct: 260 NVVTYNSLINGYA-MIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHV 318
Query: 339 FDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCK 398
F+ +K KK+ D+ +Y ++ + +++AV + M + V + NSLI CK
Sbjct: 319 FELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCK 378
Query: 399 NRKIDEAKEVFNDMMKRNITPTIRTFH----AFFRILRVEEEVFELLDKMRELGCYPTIE 454
+ ++ EA+++F+ M ++ P T++ + R V +E +L D+M + PT+
Sbjct: 379 SGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYV-DEALKLCDQMCQKEVVPTVM 437
Query: 455 TYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEM 514
TY +L++ + R +V +W MM + GV+ D S L+ LF G EA + +
Sbjct: 438 TYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENV 497
Query: 515 QRKGFLPEPKTEQMLQAWLSG 535
+G L + T L +SG
Sbjct: 498 LARGLLTDTIT---LNVMISG 515
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 171/375 (45%), Gaps = 19/375 (5%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G +V Y+S+I+ + + ++ +M G ++VT +L I+ YC +
Sbjct: 256 GLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSL---IKGYCKKGLM 312
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKS----F 283
A + F K + L+ CR ++DA + + N+ + +++
Sbjct: 313 EEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRV---HDNMIEIGVRTNTTIC 369
Query: 284 NIILNGWCNLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQ 341
N ++NG+C S + EAE+++ M+ ++ D +Y +++ Y ++ + + +L DQ
Sbjct: 370 NSLINGYCK---SGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQ 426
Query: 342 MKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRK 401
M K++ P YN ++ ++ + ++L + M K V D ++ ++L++ L K
Sbjct: 427 MCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGD 486
Query: 402 IDEAKEVFNDMMKRNI-TPTIRTFHAFFRILRVEE--EVFELLDKMRELGCYPTIETYIM 458
+EA +++ +++ R + T TI + ++E+ E E+LD + C P ++TY
Sbjct: 487 FNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQA 546
Query: 459 LIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKG 518
L + + L E F + M G+ Y LI G F + + D IE++ +G
Sbjct: 547 LSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARG 606
Query: 519 FLPEPKT-EQMLQAW 532
P T ++ W
Sbjct: 607 LTPTVATYGALITGW 621
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 136/299 (45%), Gaps = 26/299 (8%)
Query: 165 KQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAV 224
++ G ++ Y+++IS K R + +L+ +R G P++ T L I +C +
Sbjct: 568 ERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGAL---ITGWCNI 624
Query: 225 RDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFN 284
+ +A T + G + ++ + ++L R + +A LL +I F+
Sbjct: 625 GMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLL--------QKIVDFD 676
Query: 285 IILNGWCNL-----------IVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLY 333
++L G+ +L + + + AE V + K+ + + + Y ++ K+ KL
Sbjct: 677 LLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLE 736
Query: 334 KVFQLF-DQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSL 392
+LF D + + + PD Y +IH A + +A L M + P++VTYN+L
Sbjct: 737 DARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNAL 796
Query: 393 IKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFE---LLDKMRELG 448
IK LCK +D A+ + + + ++ ITP T++ L V E L +KM E G
Sbjct: 797 IKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG 855
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 160/353 (45%), Gaps = 18/353 (5%)
Query: 179 MISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFK 238
MIS L KM K + A +++ + P++ T Q L Y V ++ A +
Sbjct: 512 MISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQAL---SHGYYKVGNLKEAFAVKEYME 568
Query: 239 RFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCNLIVS 296
R G I+ + L+S +Y+++ L+ + + P + ++ ++ GWCN I
Sbjct: 569 RKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTP-TVATYGALITGWCN-IGM 626
Query: 297 AREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKN-KKITPDRKVYN 355
+A EM ++GI +V + I + + K+ + L ++ + + P +
Sbjct: 627 IDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLK 686
Query: 356 AVIHALA----KGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFND 411
+ A A K + + E+V + K + P+ + YN I LCK K+++A+++F+D
Sbjct: 687 EFLEASATTCLKTQKIAESVE--NSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSD 744
Query: 412 MMKRN-ITPTIRTFHAFFRILRVEEEV---FELLDKMRELGCYPTIETYIMLIRKFCRWR 467
++ + P T+ + ++ F L D+M G P I TY LI+ C+
Sbjct: 745 LLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLG 804
Query: 468 KLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFL 520
+D ++ + + + G++ + +Y LI GL +G V EA +M KG +
Sbjct: 805 NVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 165/400 (41%), Gaps = 53/400 (13%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y++++ + D A L + M P+++T LL + A DV ++ +
Sbjct: 404 YNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDV---LSLWK 460
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFP----LEIKSFNIILNGWC 291
+ G LL AL + + +A L +NV + + N++++G C
Sbjct: 461 MMLKRGVNADEISCSTLLEALFKLGDFNEAMKLW---ENVLARGLLTDTITLNVMISGLC 517
Query: 292 NLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDR 351
+ EA+ + ++ + V +Y ++ Y K L + F + + M+ K I P
Sbjct: 518 KM-EKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTI 576
Query: 352 KVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFND 411
++YN +I K R + + +L+ + +TP V TY +LI C ID+A +
Sbjct: 577 EMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFE 636
Query: 412 MMKRNITPTI----RTFHAFFRILRVEEEV--------FELL----DKMREL------GC 449
M+++ IT + + ++ FR+ +++E F+LL ++E C
Sbjct: 637 MIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTC 696
Query: 450 Y-------------------PTIETYIMLIRKFCRWRKLDEVFKIW-NMMREDGVSHDRS 489
P Y + I C+ KL++ K++ +++ D D
Sbjct: 697 LKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEY 756
Query: 490 SYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
+Y +LIHG + G + +A EM KG +P T L
Sbjct: 757 TYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNAL 796
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 122/252 (48%), Gaps = 5/252 (1%)
Query: 307 MSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRL 366
M + I+ DVV +I+ K LF +M K I P+ YN +I +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 367 VKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHA 426
+A LL+ M + + PD+VT+++LI K RK+ EA+E++ +M++ +I PT T+++
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 427 ----FFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMRED 482
F + RV ++ +LD M GC P + T+ LI +C+ +++D +I+ M
Sbjct: 121 MIDGFCKQDRV-DDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 179
Query: 483 GVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQ 542
G+ + +Y LIHG G + A D EM G P+ T + A L ++
Sbjct: 180 GIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKA 239
Query: 543 VTDLEHNQLEDD 554
LE Q +D
Sbjct: 240 FAILEDLQKSED 251
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 123/233 (52%), Gaps = 13/233 (5%)
Query: 251 GLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCNLIVSAR--EAERVWHE 306
++ LC+ N +A++L K +FP + ++N +++ +C+ S R +A+++
Sbjct: 15 AIVDRLCKDGNHINAQNLFTEMHEKGIFP-NVLTYNCMIDSFCH---SGRWSDADQLLRH 70
Query: 307 MSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRL 366
M ++ I D+V+++++++ + K K+ + +++ +M I P YN++I K
Sbjct: 71 MIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDR 130
Query: 367 VKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTF-- 424
V +A +L +M +PDVVT+++LI CK +++D E+F +M +R I T+
Sbjct: 131 VDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 190
Query: 425 --HAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKI 475
H F ++ + + +LL++M G P T+ ++ C ++L + F I
Sbjct: 191 LIHGFCQVGDL-DAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 242
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 95/217 (43%), Gaps = 7/217 (3%)
Query: 166 QPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVR 225
+ G +V Y+ MI ++ A L+ M P +VT L I + R
Sbjct: 38 EKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSAL---INAFVKER 94
Query: 226 DVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSF 283
V A + R+ + ++ C+ V DA+ +L +K P ++ +F
Sbjct: 95 KVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSP-DVVTF 153
Query: 284 NIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMK 343
+ ++NG+C ++ EM +RGI + V+Y +++ + + L L ++M
Sbjct: 154 STLINGYCKA-KRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI 212
Query: 344 NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKN 380
+ + PD ++ ++ L + +++A +L+ ++K+
Sbjct: 213 SCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 249
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 173/418 (41%), Gaps = 78/418 (18%)
Query: 173 VREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAIN 232
V Y+++I+ KM + D A +++ MR P VT IMI C+ + A+
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYN---IMIGSLCSRGKLDLALK 214
Query: 233 TFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGW 290
Q + + L+ A V +A L+ ++ + P ++ ++N I+ G
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKP-DMFTYNTIIRGM 273
Query: 291 C---------------------------NLIVSA-------REAERVWHEMSKRGIQHDV 316
C N+++ A E E++ +M +V
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 317 VSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQT 376
V+Y+ +++ + K+ + L MK K +TPD Y+ +I A + + A+ L+T
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 377 MEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFN-------------------------- 410
M + PD+V YN+++ LCKN K D+A E+F
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 453
Query: 411 ---------DMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIM 458
+MM I P T+++ L E +E FELL MR +P++ TY +
Sbjct: 454 KIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNI 513
Query: 459 LIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQR 516
++ FC+ ++++ + M +G + ++Y VLI G+ G EA + ++ R
Sbjct: 514 VLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 119/247 (48%), Gaps = 4/247 (1%)
Query: 279 EIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQL 338
++ ++N ++NG+C + +A RV M + D V+Y ++ KL ++
Sbjct: 157 DVFAYNALINGFCKM-NRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 339 FDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCK 398
+Q+ + P Y +I A V EA+ L+ M + PD+ TYN++I+ +CK
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 399 NRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIET 455
+D A E+ ++ + P + +++ R L + EE +L+ KM C P + T
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 456 YIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQ 515
Y +LI CR K++E + +M+E G++ D SY LI G++ A ++ M
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 516 RKGFLPE 522
G LP+
Sbjct: 396 SDGCLPD 402
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 369 EAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHA-- 426
E+++LL+TM + PDV+ LIK R I +A V +++++ P + ++A
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYNALI 165
Query: 427 --FFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGV 484
F ++ R+++ +LD+MR P TY ++I C KLD K+ N + D
Sbjct: 166 NGFCKMNRIDDAT-RVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNC 224
Query: 485 SHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
+Y +LI L G V EA EM +G P+
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPD 262
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 130/291 (44%), Gaps = 43/291 (14%)
Query: 279 EIKSFNIILNGWCNLIVSAREAERVW--HEMSKRGIQHDVVSYASIMSCYSKSSKLYKVF 336
+ +FN ++ G L + + +E V M + G Q DVV+Y SI++ +S
Sbjct: 157 DTTTFNTLIKG---LFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213
Query: 337 QLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPL 396
L +M+ + + D Y+ +I +L + + A++L + ME + VVTYNSL++ L
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 397 CKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---------------------- 434
CK K ++ + DM+ R I P + TF+ + E
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 333
Query: 435 ----------------EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNM 478
E +LD M C P I T+ LI+ +C +++D+ K++
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393
Query: 479 MREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
+ + G+ + +Y +L+ G +GK+K A + + EM G LP+ T +L
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 176/377 (46%), Gaps = 26/377 (6%)
Query: 164 GKQPGYAHSVREYHSMISILGKMRKFDT--AWNLIEVMRGGGTGPSLVTPQTLLIMIRKY 221
G QP V Y+S+++ G R DT A +L+ M + T T+ I
Sbjct: 188 GCQP----DVVTYNSIVN--GICRSGDTSLALDLLRKMEERNVKADVFTYSTI---IDSL 238
Query: 222 CAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLE 279
C + AI+ F + G + + + L+ LC+ D LL ++ + P
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP-N 297
Query: 280 IKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLF 339
+ +FN++L+ + +EA ++ EM RGI ++++Y ++M Y ++L + +
Sbjct: 298 VITFNVLLDVFVKE-GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 340 DQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKN 399
D M K +PD + ++I + V + + + + + K + + VTY+ L++ C++
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 400 RKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL----RVEE--EVFELLDKMR-ELGCYPT 452
KI A+E+F +M+ + P + T+ L ++E+ E+FE L K + +LG
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG---- 472
Query: 453 IETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYI 512
I Y +I C+ K+++ + ++ + GV + +Y V+I GL G + EA+
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532
Query: 513 EMQRKGFLPEPKTEQML 529
+M+ G P T L
Sbjct: 533 KMEEDGNAPNDCTYNTL 549
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 135/329 (41%), Gaps = 37/329 (11%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
+V ++ ++ + K K A L + M G P+++T TL+ YC + A
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM---DGYCMQNRLSEAN 353
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL-FCNKNVFPLEIKSFNIILNGW 290
N R I F L+ C K V D + +K +++I++ G+
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Query: 291 CNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPD 350
C + AE ++ EM G+ DV++Y ++ + KL K ++F+ ++ K+
Sbjct: 414 CQ-SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472
Query: 351 RKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFN 410
+Y +I + KG V++A NL ++ V P+V+TY +I LCK + EA
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA----- 527
Query: 411 DMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLD 470
NI LL KM E G P TY LIR R L
Sbjct: 528 -----NI----------------------LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 560
Query: 471 EVFKIWNMMREDGVSHDRSSYIVLIHGLF 499
K+ M+ G S D SS ++I L
Sbjct: 561 ASAKLIEEMKSCGFSADASSIKMVIDMLL 589
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 115/247 (46%), Gaps = 7/247 (2%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G + ++ Y++++ + A N++++M P +VT +L I+ YC V+ V
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL---IKGYCMVKRV 384
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNI 285
+ F + G + L+ C+ ++ AE L + V P ++ ++ I
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP-DVMTYGI 443
Query: 286 ILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNK 345
+L+G C+ +A ++ ++ K + +V Y +I+ K K+ + LF + K
Sbjct: 444 LLDGLCD-NGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 502
Query: 346 KITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEA 405
+ P+ Y +I L K + EA LL+ ME++ P+ TYN+LI+ ++ + +
Sbjct: 503 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTAS 562
Query: 406 KEVFNDM 412
++ +M
Sbjct: 563 AKLIEEM 569
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 98/234 (41%), Gaps = 3/234 (1%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
+A ++ EM + +V ++ S +++ + V Q++ I + N +I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
+ + A ++L + K PD T+N+LIK L K+ EA + + M++
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 419 PTIRTFHAFFR-ILRVEEE--VFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKI 475
P + T+++ I R + +LL KM E + TY +I CR +D +
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 476 WNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
+ M G+ +Y L+ GL GK + +M + +P T +L
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 3/128 (2%)
Query: 401 KIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMREL---GCYPTIETYI 457
K D+A +F +M++ P++ F FF + ++ +LD ++L G I T
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 458 MLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRK 517
++I FCR K + + + + G D +++ LI GLFL GKV EA M
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 518 GFLPEPKT 525
G P+ T
Sbjct: 188 GCQPDVVT 195
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 168/371 (45%), Gaps = 16/371 (4%)
Query: 160 FLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIR 219
+++G PG + ++ +++ L K + A L+ MR G P+ V+ TL I+
Sbjct: 147 MIYSGVIPG----LITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTL---IK 199
Query: 220 KYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCR-----YKNVQDAEHLLFCNKN 274
C+V +V +A+ F ++G + ++ ALC+ N + E +L ++
Sbjct: 200 GLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQA 259
Query: 275 VFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYK 334
PL+I I+++ C + +A VW EMS++ + D V Y I+ S +
Sbjct: 260 NAPLDIVICTILMDS-CFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVA 318
Query: 335 VFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIK 394
+ M + + PD YN +I AL K EA +L TM+ V PD ++Y +I+
Sbjct: 319 AYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQ 378
Query: 395 PLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAF---FRILRVEEEVFELLDKMRELGCYP 451
LC + ++ A E M+K ++ P + ++ + +L+ M G P
Sbjct: 379 GLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKP 438
Query: 452 TIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYY 511
+ T LI + + +L + + + N MR + D ++Y +L+ G ++ A Y
Sbjct: 439 NVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLY 498
Query: 512 IEMQRKGFLPE 522
EM R+G P+
Sbjct: 499 DEMLRRGCQPD 509
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 150/369 (40%), Gaps = 12/369 (3%)
Query: 169 YAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVG 228
Y + + S++ L K D A L + M G P L+T LL C +
Sbjct: 117 YDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLL---NGLCKAGYIE 173
Query: 229 RAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIK--SFNII 286
+A + G + L+ LC NV A +L F N + + + NII
Sbjct: 174 KADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYL-FNTMNKYGIRPNRVTCNII 232
Query: 287 LNGWCNLIVSAREAERVWHEM---SKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMK 343
++ C V +++ E+ S+ D+V +M K+ + + +++ +M
Sbjct: 233 VHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMS 292
Query: 344 NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKID 403
K + D VYN +I L + A + M K V PDV TYN+LI LCK K D
Sbjct: 293 QKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFD 352
Query: 404 EAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVF---ELLDKMRELGCYPTIETYIMLI 460
EA ++ M + P ++ + L + +V E L M + P + + ++I
Sbjct: 353 EACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVI 412
Query: 461 RKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFL 520
+ R+ + N+M GV + + LIHG G++ +A EM+
Sbjct: 413 DGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIH 472
Query: 521 PEPKTEQML 529
P+ T +L
Sbjct: 473 PDTTTYNLL 481
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 112/246 (45%), Gaps = 11/246 (4%)
Query: 319 YASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTME 378
++SIM KL L +M + P +N +++ L K +++A L++ M
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 379 KNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL------- 431
+ +P+ V+YN+LIK LC +D+A +FN M K I P T + L
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243
Query: 432 -RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSS 490
++ + E+LD + + I++ F + + + ++W M + V D
Sbjct: 244 NNNKKLLEEILDSSQANAPLDIVICTILMDSCF-KNGNVVQALEVWKEMSQKNVPADSVV 302
Query: 491 YIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDLEHNQ 550
Y V+I GL +G + A+ + +M ++G P+ T L + L ++G + DL H
Sbjct: 303 YNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALC-KEGKFDEACDL-HGT 360
Query: 551 LEDDTV 556
+++ V
Sbjct: 361 MQNGGV 366
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 121/278 (43%), Gaps = 10/278 (3%)
Query: 216 IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAE--HLLFCNK 273
++IR C+ ++ A + G + + L+SALC+ +A H N
Sbjct: 305 VIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNG 364
Query: 274 NVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLY 333
V P +I S+ +I+ G C + A M K + +V+ + ++ Y +
Sbjct: 365 GVAPDQI-SYKVIIQGLC-IHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTS 422
Query: 334 KVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLI 393
+ + M + + P+ NA+IH KG + +A + M + PD TYN L+
Sbjct: 423 SALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLL 482
Query: 394 KPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCY 450
C + A +++++M++R P I T+ R L + ++ LL +++ G
Sbjct: 483 GAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGIT 542
Query: 451 PTIETYIMLIRKFCRWRKLDE---VFKIWNMMREDGVS 485
+++L +K+ R ++ E V+K W R GVS
Sbjct: 543 IDHVPFLILAKKYTRLQRPGEAYLVYKKWLATRNRGVS 580
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 116/264 (43%), Gaps = 39/264 (14%)
Query: 155 AAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTL 214
AA+ F K+ G V Y+++IS L K KFD A +L M+ GG P ++ +
Sbjct: 318 AAYGFMCDMVKR-GVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYK-- 374
Query: 215 LIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKN 274
++I+ C DV RA +EF + +
Sbjct: 375 -VIIQGLCIHGDVNRA----------------NEFLLSMLK-----------------SS 400
Query: 275 VFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYK 334
+ P E+ +N++++G+ A V + M G++ +V + +++ Y K +L
Sbjct: 401 LLP-EVLLWNVVIDGY-GRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLID 458
Query: 335 VFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIK 394
+ + ++M++ KI PD YN ++ A ++ A L M + PD++TY L++
Sbjct: 459 AWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVR 518
Query: 395 PLCKNRKIDEAKEVFNDMMKRNIT 418
LC ++ +A+ + + + IT
Sbjct: 519 GLCWKGRLKKAESLLSRIQATGIT 542
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 163/375 (43%), Gaps = 60/375 (16%)
Query: 152 DWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTP 211
D + A +F W + P + H+V Y S++++L P V P
Sbjct: 39 DPQTALSFSDWISRIPNFKHNVTSYASLVTLLCSQEI-----------------PYEV-P 80
Query: 212 QTLLIMIRKYCAVRDVGRAINTFYAFKR-----FGFQVGIDEFQGLLSALCRYKNVQDAE 266
+ ++MI+ +VRD ++ ++ +++ + LLS+L R+ V++ +
Sbjct: 81 KITILMIKSCNSVRDALFVVDFCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMK 140
Query: 267 HLLF-CNKNVFPLEIKSFNIILNGWCNL--IVSARE------------------------ 299
L +++ +I +FN ++NG+C L +V A++
Sbjct: 141 RLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGH 200
Query: 300 --------AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDR 351
A +V+ EM++ G + VSY ++ ++ K+ + L +MK+ P+
Sbjct: 201 CRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNV 260
Query: 352 KVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFND 411
+ Y +I AL EA+NL + M ++ + PD Y LI+ C +DEA +
Sbjct: 261 RTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEH 320
Query: 412 MMKRNITPTIRTFHAFFR--ILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKL 469
M++ + P + T++A + + + LL KM E P + TY LI C L
Sbjct: 321 MLENGLMPNVITYNALIKGFCKKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNL 380
Query: 470 DEVFKIWNMMREDGV 484
D +++ ++M E G+
Sbjct: 381 DSAYRLLSLMEESGL 395
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 35/201 (17%)
Query: 346 KITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEA 405
K+TP K YN ++ +LA+ LV+E L M ++ V+PD+ T+N+L+ CK + EA
Sbjct: 117 KLTP--KCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEA 174
Query: 406 KEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCR 465
K+ +++ GC P TY I CR
Sbjct: 175 KQYVTWLIQA--------------------------------GCDPDYFTYTSFITGHCR 202
Query: 466 WRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT 525
+++D FK++ M ++G + SY LI+GLF K+ EA ++M+ P +T
Sbjct: 203 RKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRT 262
Query: 526 EQMLQAWLSGRQGTEGQVTDL 546
+L L G G + + +L
Sbjct: 263 YTVLIDALCG-SGQKSEAMNL 282
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 5/208 (2%)
Query: 218 IRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNK--NV 275
I +C ++V A F + G + L+ L K + +A LL K N
Sbjct: 197 ITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNC 256
Query: 276 FPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKV 335
P ++++ ++++ C EA ++ +MS+ GI+ D Y ++ + L +
Sbjct: 257 CP-NVRTYTVLIDALCG-SGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEA 314
Query: 336 FQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKP 395
L + M + P+ YNA+I K V +A+ LL M + N+ PD++TYN+LI
Sbjct: 315 SGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAG 373
Query: 396 LCKNRKIDEAKEVFNDMMKRNITPTIRT 423
C + +D A + + M + + P RT
Sbjct: 374 QCSSGNLDSAYRLLSLMEESGLVPNQRT 401
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 154/339 (45%), Gaps = 22/339 (6%)
Query: 156 AFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLL 215
A+ FFLW+G+Q + H+V YH ++ I + ++ W L++ M G P+ LL
Sbjct: 132 AYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGF-PTTARTFNLL 190
Query: 216 IMIRKYCAVRDVG---RAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAE----HL 268
I C+ + G +A+ F K F ++ + +L++L K + E +
Sbjct: 191 I-----CSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQM 245
Query: 269 LFCNKNVFPLEIKSFNIILNGWCNLIVSAREA-ERVWHEMSKRGIQHDVVSYASIMSCYS 327
L ++ F ++ ++NI+L W N + + +R++ EM++ G D +Y ++
Sbjct: 246 L---EDGFSPDVLTYNILL--WTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILG 300
Query: 328 KSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVV 387
K +K + MK I P Y +I L++ ++ L M K PDVV
Sbjct: 301 KGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVV 360
Query: 388 TYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFE---LLDKM 444
Y +I + ++D+AKE+F +M + P + T+++ R L + E E LL +M
Sbjct: 361 CYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEM 420
Query: 445 RELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDG 483
GC P Y L+ + KL E K+ M + G
Sbjct: 421 ESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 4/203 (1%)
Query: 322 IMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNN 381
I SC V Q F + K P + YNA++++L + K + + M ++
Sbjct: 191 ICSCGEAGLAKQAVVQ-FMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDG 249
Query: 382 VTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEE---VF 438
+PDV+TYN L+ + K+D +F++M + +P T++ IL +
Sbjct: 250 FSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAAL 309
Query: 439 ELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGL 498
L+ M+E+G P++ Y LI R L+ + M + G D Y V+I G
Sbjct: 310 TTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGY 369
Query: 499 FLNGKVKEAHDYYIEMQRKGFLP 521
++G++ +A + + EM KG LP
Sbjct: 370 VVSGELDKAKEMFREMTVKGQLP 392
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 96/215 (44%), Gaps = 7/215 (3%)
Query: 313 QHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVN 372
+H V SY +M +++ + +++L D+M + +N +I + + L K+AV
Sbjct: 146 RHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVV 205
Query: 373 LLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAF----F 428
+ N P +YN+++ L ++ + V+ M++ +P + T++ +
Sbjct: 206 QFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNY 265
Query: 429 RILRVEEEVFE-LLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHD 487
R+ +++ F+ L D+M G P TY +L+ + K N M+E G+
Sbjct: 266 RLGKMDR--FDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPS 323
Query: 488 RSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
Y LI GL G ++ + EM + G P+
Sbjct: 324 VLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPD 358
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 162/341 (47%), Gaps = 13/341 (3%)
Query: 150 RNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLV 209
++D A F +A +QP + HS + +I LG+ R F+ +++ R G +
Sbjct: 61 QSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYP---L 117
Query: 210 TPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKN-VQDAEHL 268
T + +I+ Y + + ++TFY F F +L L ++ +Q A L
Sbjct: 118 TGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFEL 177
Query: 269 LFCNK--NVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCY 326
++ V P +S+N+++ +C L A +++ +M +R + DV SY ++ +
Sbjct: 178 FKSSRLHGVMP-NTRSYNLLMQAFC-LNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGF 235
Query: 327 SKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDV 386
+ ++ +L D M NK PDR Y ++++L + ++EA LL M+ PD+
Sbjct: 236 CRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDL 295
Query: 387 VTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFE----LLD 442
V YN++I C+ + +A++V +DM+ +P ++ L ++ +F+ L+
Sbjct: 296 VHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGL-CDQGMFDEGKKYLE 354
Query: 443 KMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDG 483
+M G P L++ FC + K++E + ++ ++G
Sbjct: 355 EMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 3/193 (1%)
Query: 332 LYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNS 391
L K F+LF + + P+ + YN ++ A + A L M + +V PDV +Y
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 392 LIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELG 448
LI+ C+ +++ A E+ +DM+ + P ++ L + E ++LL +M+ G
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKG 290
Query: 449 CYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAH 508
C P + Y +I FCR + + K+ + M +G S + SY LI GL G E
Sbjct: 291 CNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGK 350
Query: 509 DYYIEMQRKGFLP 521
Y EM KGF P
Sbjct: 351 KYLEEMISKGFSP 363
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 112/272 (41%), Gaps = 10/272 (3%)
Query: 167 PGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRD 226
P H R ++S G ++K A+ L + R G P+ ++ ++++ +C D
Sbjct: 152 PQPKHLNRILDVLVSHRGYLQK---AFELFKSSRLHGVMPN---TRSYNLLMQAFCLNDD 205
Query: 227 VGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFN 284
+ A F +D ++ L+ CR V A LL NK P + S+
Sbjct: 206 LSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRL-SYT 264
Query: 285 IILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKN 344
+LN C REA ++ M +G D+V Y +++ + + + ++ D M +
Sbjct: 265 TLLNSLCR-KTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLS 323
Query: 345 KKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDE 404
+P+ Y +I L + E L+ M +P N L+K C K++E
Sbjct: 324 NGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEE 383
Query: 405 AKEVFNDMMKRNITPTIRTFHAFFRILRVEEE 436
A +V +MK T T+ ++ E+E
Sbjct: 384 ACDVVEVVMKNGETLHSDTWEMVIPLICNEDE 415
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 113/279 (40%), Gaps = 16/279 (5%)
Query: 150 RNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLV 209
R + AF F + + G + R Y+ ++ A+ L M P +
Sbjct: 168 RGYLQKAFELF-KSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDV- 225
Query: 210 TPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL 269
+ I+I+ +C V A+ GF + LL++LCR +++A LL
Sbjct: 226 --DSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLL 283
Query: 270 F------CNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIM 323
CN ++ +N ++ G+C A +A +V +M G + VSY +++
Sbjct: 284 CRMKLKGCNPDLV-----HYNTMILGFCRED-RAMDARKVLDDMLSNGCSPNSVSYRTLI 337
Query: 324 SCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVT 383
+ + ++M +K +P V N ++ V+EA ++++ + KN T
Sbjct: 338 GGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGET 397
Query: 384 PDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIR 422
T+ +I +C + ++ K D +K IT R
Sbjct: 398 LHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDTR 436
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 183/440 (41%), Gaps = 48/440 (10%)
Query: 149 IRNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSL 208
IR + A++FF W+ KQ Y H++ Y S++ +L + D + P
Sbjct: 128 IREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRI-RFVSSEIKKFEFPMT 186
Query: 209 VTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHL 268
V+ L I+ + + V + + K G + + + L++ L V AE +
Sbjct: 187 VSAANAL--IKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERV 244
Query: 269 L-FCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYAS-IMSCY 326
+I ++N ++ G+C + + E++ +M RG + D ++Y + I +CY
Sbjct: 245 FEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKL-RDMETRGHEADKITYMTMIQACY 303
Query: 327 S----------------------------------KSSKLYKVFQLFDQMKNKKITPDRK 352
+ K KL + + +F+ M K P+
Sbjct: 304 ADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVA 363
Query: 353 VYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFN-- 410
+Y +I AK V++A+ LL M PDVVTY+ ++ LCKN +++EA + F+
Sbjct: 364 IYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTC 423
Query: 411 --DMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRK 468
D + N + RV +E L ++M E GC Y LI F + RK
Sbjct: 424 RFDGLAINSMFYSSLIDGLGKAGRV-DEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRK 482
Query: 469 LDEVFKIWNMM-REDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQ 527
+DE ++ M E+G +Y +L+ G+F + +EA + M KG P +
Sbjct: 483 VDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFR 542
Query: 528 MLQA--WLSGRQGTEGQVTD 545
L LSG+ ++ D
Sbjct: 543 ALSTGLCLSGKVARACKILD 562
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 170/420 (40%), Gaps = 76/420 (18%)
Query: 165 KQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYC-- 222
K+ G ++ Y+ +++ L D+A + EVM G P +VT T MI+ YC
Sbjct: 214 KENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNT---MIKGYCKA 270
Query: 223 ---------------------------------AVRDVGRAINTFYAFKRFGFQVGIDEF 249
A D G + + G QV F
Sbjct: 271 GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAF 330
Query: 250 QGLLSALCRYKNVQDAEHLLFCN---KNVFPLEIKSFNIILNGWCNLIVSAREAERVWHE 306
++ LC+ + + + +F N K P + + ++++G+ S +A R+ H
Sbjct: 331 SLVIGGLCKEGKLNEG-YTVFENMIRKGSKP-NVAIYTVLIDGYAK-SGSVEDAIRLLHR 387
Query: 307 MSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRL 366
M G + DVV+Y+ +++ K+ ++ + F + + + Y+++I L K
Sbjct: 388 MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGR 447
Query: 367 VKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHA 426
V EA L + M + T D YN+LI K+RK+DEA +F
Sbjct: 448 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFK---------------- 491
Query: 427 FFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSH 486
R+EEE GC T+ TY +L+ + + +E K+W+MM + G++
Sbjct: 492 -----RMEEEE----------GCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITP 536
Query: 487 DRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWL-SGRQGTEGQVTD 545
+ + L GL L+GKV A E+ G + + E M+ +GR ++ D
Sbjct: 537 TAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLAD 596
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 180/413 (43%), Gaps = 55/413 (13%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G + +V Y +I L + + A+ + + G PS+VT +L I +C ++
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSL---IDGFCKCGNL 442
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNV---FPLEIKSFN 284
+ + G+ + + L+ L + + A + F K + L + FN
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA--MRFSVKMLGQSIRLNVVVFN 500
Query: 285 IILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIM------SCYSKSSKLYKVFQL 338
+++GWC L EA +V+ M GI+ DV ++ ++M + K K QL
Sbjct: 501 SLIDGWCRL-NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQL 559
Query: 339 FDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCK 398
FD M+ KI+ D V N VIH L K +++A + + + PD+VTYN++I C
Sbjct: 560 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS 619
Query: 399 NRKIDEAKEVF-------------------------NDM----------MKRNITPTIRT 423
R++DEA+ +F NDM ++ P T
Sbjct: 620 LRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVT 679
Query: 424 FHA----FFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMM 479
+ F + + +E F+L ++M+E G P+I +Y ++I C+ ++DE I++
Sbjct: 680 YGCLMDWFSKSVDIEGS-FKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 738
Query: 480 REDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAW 532
+ + D +Y +LI G G++ EA Y M R G P+ ++ L +
Sbjct: 739 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEY 791
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 175/432 (40%), Gaps = 57/432 (13%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G A +V + ++I+ K + D A++L +VM G P L+ TL I Y +
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTL---IDGYFKAGML 337
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHL---LFCNKNVFPLEIKSFN 284
G F G ++ + F + + ++ A + + C + + P + ++
Sbjct: 338 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC-QGISP-NVVTYT 395
Query: 285 IILNGWCNLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQM 342
I++ G C R EA ++ ++ KRG++ +V+Y+S++ + K L F L++ M
Sbjct: 396 ILIKGLCQ---DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 343 KNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKI 402
PD +Y ++ L+K L+ A+ M ++ +VV +NSLI C+ +
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 403 DEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEV---------FELLDKMRE------- 446
DEA +VF M I P + TF R+ +E+ +L D M+
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADI 572
Query: 447 ----------LGCY------------------PTIETYIMLIRKFCRWRKLDEVFKIWNM 478
C+ P I TY +I +C R+LDE +I+ +
Sbjct: 573 AVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFEL 632
Query: 479 MREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQG 538
++ + + +LIH L N + A + M KG P T L W S
Sbjct: 633 LKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVD 692
Query: 539 TEGQVTDLEHNQ 550
EG E Q
Sbjct: 693 IEGSFKLFEEMQ 704
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 94/221 (42%), Gaps = 9/221 (4%)
Query: 303 VWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFD-QMKNKKITPDRKVYNAVIHAL 361
V + R + DV + +M C + + K ++F + + P VY ++++L
Sbjct: 135 VLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYR-MLNSL 191
Query: 362 AKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLI--KPLCKNRKIDEAKEVFNDMMKRNITP 419
V + + + + P V+ + + CK ++ +A + +M+R
Sbjct: 192 IGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKG-EVTKALDFHRLVMERGFRV 250
Query: 420 TIRTFHAFFRILRVE--EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWN 477
I + + + L V+ E LL + + G P + T+ LI FC+ ++D F ++
Sbjct: 251 GIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFK 310
Query: 478 MMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKG 518
+M + G+ D +Y LI G F G + H + + KG
Sbjct: 311 VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 121/248 (48%), Gaps = 6/248 (2%)
Query: 279 EIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQL 338
+ +++ ++ G+C + R+ + EM KR I +Y +++ S L + +
Sbjct: 381 QAQAYASLIEGYCRE-KNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439
Query: 339 FDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCK 398
+M P+ +Y +I + +A+ +L+ M++ + PD+ YNSLI L K
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 399 NRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDK----MRELGCYPTIE 454
+++DEA+ +M++ + P T+ AF +E F DK MRE G P
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGY-IEASEFASADKYVKEMRECGVLPNKV 558
Query: 455 TYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEM 514
LI ++C+ K+ E + M + G+ D +Y VL++GLF N KV +A + + EM
Sbjct: 559 LCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618
Query: 515 QRKGFLPE 522
+ KG P+
Sbjct: 619 RGKGIAPD 626
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 151/350 (43%), Gaps = 41/350 (11%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y +++ + D A+N+++ M G P++V TL I+ + G A+
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL---IKTFLQNSRFGDAMRVLK 476
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIILNGWCNLIV 295
K G I + L+ L + K + +A L
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV------------------------- 511
Query: 296 SAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYN 355
EM + G++ + +Y + +S Y ++S+ + +M+ + P++ +
Sbjct: 512 ----------EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCT 561
Query: 356 AVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKR 415
+I+ K V EA + ++M + D TY L+ L KN K+D+A+E+F +M +
Sbjct: 562 GLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK 621
Query: 416 NITPTIRTFHAF---FRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEV 472
I P + ++ F L ++ + D+M E G P + Y ML+ FCR ++++
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKA 681
Query: 473 FKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
++ + M G+ + +Y +I G +G + EA + EM+ KG +P+
Sbjct: 682 KELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD 731
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 102/469 (21%), Positives = 185/469 (39%), Gaps = 88/469 (18%)
Query: 160 FLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIR 219
FL + G + Y + IS + +F +A ++ MR G P+ V L I
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL---IN 565
Query: 220 KYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFP 277
+YC V A + + + G + L++ L + V DAE + K + P
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 278 LEIKSFNIILNGWC----------------------NLIV------------SAREAERV 303
++ S+ +++NG+ N+I+ +A+ +
Sbjct: 626 -DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 304 WHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAK 363
EMS +G+ + V+Y +I+ Y KS L + F+LFD+MK K + PD VY ++ +
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Query: 364 GRLVKEAVNLLQTMEKNNVT--------------------------------------PD 385
V+ A+ + T +K + P+
Sbjct: 745 LNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPN 804
Query: 386 VVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAF---FRILRVEEEVFELLD 442
VTYN +I LCK ++ AKE+F+ M N+ PT+ T+ + + + E+F + D
Sbjct: 805 DVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFD 864
Query: 443 KMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMM-----REDGVSHDRSSYIVLIHG 497
+ G P Y ++I F + + + + M +DG S+ L+ G
Sbjct: 865 EAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSG 924
Query: 498 LFLNGKVKEAHDYYIEMQRKGFLPEPKT--EQMLQAWLSGRQGTEGQVT 544
G+++ A M R ++P+ T E + ++ +S Q E
Sbjct: 925 FAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRVEADAV 973
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 122/274 (44%), Gaps = 5/274 (1%)
Query: 252 LLSALCRYKNVQDAEHLLFCNKNV-FPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKR 310
L+ LC+ K ++DA+ LL ++ L+ +++++++G +A A+ + HEM
Sbjct: 283 LIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG-RNADAAKGLVHEMVSH 341
Query: 311 GIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEA 370
GI Y + SK + K LFD M + P + Y ++I + + V++
Sbjct: 342 GINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQG 401
Query: 371 VNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRI 430
LL M+K N+ TY +++K +C + +D A + +M+ P + + +
Sbjct: 402 YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKT 461
Query: 431 LRVEE---EVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHD 487
+ +L +M+E G P I Y LI + +++DE M E+G+ +
Sbjct: 462 FLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPN 521
Query: 488 RSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
+Y I G + A Y EM+ G LP
Sbjct: 522 AFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 151/358 (42%), Gaps = 8/358 (2%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y +I L K R D A L+ M G + ++ K V + +A+ F
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKE-GVMEKAKAL--FD 371
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNV-QDAEHLLFCNKNVFPLEIKSFNIILNGWCNLI 294
G + L+ CR KNV Q E L+ K + ++ ++ G C+
Sbjct: 372 GMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCS-S 430
Query: 295 VSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVY 354
A + EM G + +VV Y +++ + ++S+ ++ +MK + I PD Y
Sbjct: 431 GDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCY 490
Query: 355 NAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMK 414
N++I L+K + + EA + L M +N + P+ TY + I + + A + +M +
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550
Query: 415 RNITPTIRTFHAFFRILRVEEEVFELLDKMREL---GCYPTIETYIMLIRKFCRWRKLDE 471
+ P + +V E R + G +TY +L+ + K+D+
Sbjct: 551 CGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD 610
Query: 472 VFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
+I+ MR G++ D SY VLI+G G +++A + EM +G P ML
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 166/370 (44%), Gaps = 23/370 (6%)
Query: 165 KQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAV 224
K+ G A + Y+S+I L K ++ D A + + M G P+ T I Y
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAF---ISGYIEA 535
Query: 225 RDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDA--EHLLFCNKNVFPLEIKS 282
+ A + G GL++ C+ V +A + ++ + + K+
Sbjct: 536 SEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILG-DAKT 594
Query: 283 FNIILNG-WCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQ 341
+ +++NG + N V +AE ++ EM +GI DV SY +++ +SK + K +FD+
Sbjct: 595 YTVLMNGLFKNDKVD--DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 342 MKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRK 401
M + +TP+ +YN ++ + +++A LL M + P+ VTY ++I CK+
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 402 IDEAKEVFNDMMKRNITPTIRTFHAFF----RILRVEEEVFELLDKMRELGCYPTIETYI 457
+ EA +F++M + + P + R+ VE + + + GC + +
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI--TIFGTNKKGCASSTAPFN 770
Query: 458 MLIRKFCRWRKLDEVFKIWNMMREDGVSHDR------SSYIVLIHGLFLNGKVKEAHDYY 511
LI ++ K + ++ N + DG S DR +Y ++I L G ++ A + +
Sbjct: 771 ALINWVFKFGKTELKTEVLNRLM-DG-SFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELF 828
Query: 512 IEMQRKGFLP 521
+MQ +P
Sbjct: 829 HQMQNANLMP 838
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 161/325 (49%), Gaps = 18/325 (5%)
Query: 208 LVTPQTLL--IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDA 265
L T T+L +++R C +R V AI FY K GF + +L+ L R +++A
Sbjct: 150 LETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENA 209
Query: 266 EHLLFCNKNVFPLEIKS----FNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYAS 321
+++ +EIKS FNI++N C ++A+ M GI+ +V+Y +
Sbjct: 210 WVFY---ADMYRMEIKSNVYTFNIMINVLCKE-GKLKKAKGFLGIMEVFGIKPTIVTYNT 265
Query: 322 IMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALA-KGRLVKEAVNLLQTMEKN 380
++ +S ++ + +MK+K PD + YN ++ + +GR A +L+ M++
Sbjct: 266 LVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR----ASEVLREMKEI 321
Query: 381 NVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFE- 439
+ PD V+YN LI+ N ++ A ++M+K+ + PT T++ L +E ++
Sbjct: 322 GLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAA 381
Query: 440 --LLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHG 497
L+ ++RE G TY +LI +C+ + F + + M DG+ + +Y LI+
Sbjct: 382 EILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYV 441
Query: 498 LFLNGKVKEAHDYYIEMQRKGFLPE 522
L K +EA + + ++ KG P+
Sbjct: 442 LCRKNKTREADELFEKVVGKGMKPD 466
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 169/391 (43%), Gaps = 13/391 (3%)
Query: 154 EAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQT 213
EA F+L K+ G+ + ++++L ++ + + AW M ++ T
Sbjct: 173 EAIECFYLM--KEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFN- 229
Query: 214 LLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNK 273
IMI C + +A + FG + I + L+ ++ A ++ K
Sbjct: 230 --IMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMK 287
Query: 274 NV-FPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKL 332
+ F +++++N IL+ CN A V EM + G+ D VSY ++ S + L
Sbjct: 288 SKGFQPDMQTYNPILSWMCN----EGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDL 343
Query: 333 YKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSL 392
F D+M + + P YN +IH L ++ A L++ + + + D VTYN L
Sbjct: 344 EMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIL 403
Query: 393 IKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL---RVEEEVFELLDKMRELGC 449
I C++ +A + ++MM I PT T+ + +L E EL +K+ G
Sbjct: 404 INGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGM 463
Query: 450 YPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHD 509
P + L+ C +D F + M ++ D +Y L+ GL GK +EA +
Sbjct: 464 KPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARE 523
Query: 510 YYIEMQRKGFLPEPKTEQMLQAWLSGRQGTE 540
EM+R+G P+ + L + S + T+
Sbjct: 524 LMGEMKRRGIKPDHISYNTLISGYSKKGDTK 554
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 117/224 (52%), Gaps = 4/224 (1%)
Query: 278 LEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQ 337
L+ ++NI++NG+C A++A + EM GIQ +Y S++ + +K + +
Sbjct: 395 LDSVTYNILINGYCQH-GDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADE 453
Query: 338 LFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLC 397
LF+++ K + PD + N ++ + A +LL+ M+ ++ PD VTYN L++ LC
Sbjct: 454 LFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLC 513
Query: 398 KNRKIDEAKEVFNDMMKRNITP---TIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIE 454
K +EA+E+ +M +R I P + T + + + F + D+M LG PT+
Sbjct: 514 GEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLL 573
Query: 455 TYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGL 498
TY L++ + ++ + ++ M+ +G+ + SS+ +I +
Sbjct: 574 TYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 125/255 (49%), Gaps = 4/255 (1%)
Query: 278 LEIKS---FNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYK 334
LE KS F++++ C L + EA ++ M ++G + I++ S+ +++
Sbjct: 150 LETKSTILFDLLVRCCCQLRM-VDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIEN 208
Query: 335 VFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIK 394
+ + M +I + +N +I+ L K +K+A L ME + P +VTYN+L++
Sbjct: 209 AWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQ 268
Query: 395 PLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIE 454
+I+ A+ + ++M + P ++T++ + E E+L +M+E+G P
Sbjct: 269 GFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSV 328
Query: 455 TYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEM 514
+Y +LIR L+ F + M + G+ +Y LIHGLF+ K++ A E+
Sbjct: 329 SYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREI 388
Query: 515 QRKGFLPEPKTEQML 529
+ KG + + T +L
Sbjct: 389 REKGIVLDSVTYNIL 403
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 164/389 (42%), Gaps = 46/389 (11%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
+V ++ MI++L K K A + +M G P++VT TL ++ + + A
Sbjct: 224 NVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTL---VQGFSLRGRIEGAR 280
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNV--FPLEIKSFNIILNG 289
K GFQ + + +LS +C N A +L K + P + S+NI++ G
Sbjct: 281 LIISEMKSKGFQPDMQTYNPILSWMC---NEGRASEVLREMKEIGLVPDSV-SYNILIRG 336
Query: 290 WCN-----LIVSARE-----------------------------AERVWHEMSKRGIQHD 315
N + + R+ AE + E+ ++GI D
Sbjct: 337 CSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLD 396
Query: 316 VVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQ 375
V+Y +++ Y + K F L D+M I P + Y ++I+ L + +EA L +
Sbjct: 397 SVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFE 456
Query: 376 TMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE- 434
+ + PD+V N+L+ C +D A + +M +I P T++ R L E
Sbjct: 457 KVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEG 516
Query: 435 --EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYI 492
EE EL+ +M+ G P +Y LI + + F + + M G + +Y
Sbjct: 517 KFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYN 576
Query: 493 VLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
L+ GL N + + A + EM+ +G +P
Sbjct: 577 ALLKGLSKNQEGELAEELLREMKSEGIVP 605
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 22/239 (9%)
Query: 356 AVIHALAKGRLVKEAVNLLQTMEKNNV---------------TPDVVTYNSLIKPLCKNR 400
AVI L+ + V + + + T KN++ T + ++ L++ C+ R
Sbjct: 110 AVISKLSSPKPVTQLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLR 169
Query: 401 KIDEAKEVFNDMMKRNITPTIRTFHAFFRIL----RVEEEVFELLDKMRELGCYPTIETY 456
+DEA E F M ++ P T + +L R+E D M + + T+
Sbjct: 170 MVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD-MYRMEIKSNVYTF 228
Query: 457 IMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQR 516
++I C+ KL + +M G+ +Y L+ G L G+++ A EM+
Sbjct: 229 NIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKS 288
Query: 517 KGFLPEPKTEQMLQAWLSGRQGTEGQVTDLEHNQLEDDTVEKK--VKATPSKFDKEKAF 573
KGF P+ +T + +W+ + +++ L D+V ++ + D E AF
Sbjct: 289 KGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAF 347
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 97/234 (41%), Gaps = 44/234 (18%)
Query: 329 SSKLYKVFQLFDQM---KNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTP- 384
+S+ + LFD++ ++ T +++ ++ + R+V EA+ M++ P
Sbjct: 130 TSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPK 189
Query: 385 ----------------------------------DVVTYNSLIKPLCKNRKIDEAKEVFN 410
+V T+N +I LCK K+ +AK
Sbjct: 190 TETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLG 249
Query: 411 DMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIMLIRKFCRWR 467
M I PTI T++ + + E ++ +M+ G P ++TY ++ C
Sbjct: 250 IMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG 309
Query: 468 KLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
+ EV + M+E G+ D SY +LI G NG ++ A Y EM ++G +P
Sbjct: 310 RASEVLR---EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVP 360
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 85/189 (44%), Gaps = 7/189 (3%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y S+I +L + K A L E + G G P LV TL+ +CA+ ++ RA +
Sbjct: 435 YTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLM---DGHCAIGNMDRAFSLLK 491
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCNL 293
+ L+ LC ++A L+ + + P I S+N +++G+
Sbjct: 492 EMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHI-SYNTLISGYSKK 550
Query: 294 IVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKV 353
+ A V EM G +++Y +++ SK+ + +L +MK++ I P+
Sbjct: 551 -GDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSS 609
Query: 354 YNAVIHALA 362
+ +VI A++
Sbjct: 610 FCSVIEAMS 618
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 159/357 (44%), Gaps = 14/357 (3%)
Query: 173 VREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAIN 232
V Y+++I + ++ + A L M+G G SLVT I+I +C + A+
Sbjct: 177 VFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWG---ILIDAFCKAGKMDEAMG 233
Query: 233 TFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGW 290
K G + + + L+ C + + L + P I ++N ++ G+
Sbjct: 234 FLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI-TYNTLIRGF 292
Query: 291 CNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPD 350
C L +EA ++ M +RG++ +V +Y ++ K + QL + M K P+
Sbjct: 293 CKL-GQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPN 351
Query: 351 RKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFN 410
YN +I+ L K LV +AV +++ M+K PD +TYN L+ LC +DEA ++
Sbjct: 352 AVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLY 411
Query: 411 DMMKRN--ITPTIRTFHAFFRILRVEEEVFELLD----KMRELGCYPTIETYIMLIRKFC 464
M+K + P + +++A L E + + LD + +LG + T I+L
Sbjct: 412 LMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTL- 470
Query: 465 RWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
+ +++ ++W + + + + +Y +I G G + A +M+ P
Sbjct: 471 KAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP 527
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 136/289 (47%), Gaps = 11/289 (3%)
Query: 273 KNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKL 332
K F + + NI+L G C + + A + EM + + DV SY +++ + + +L
Sbjct: 135 KRGFAFNVYNHNILLKGLCRNLECGK-AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKEL 193
Query: 333 YKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSL 392
K +L ++MK + + +I A K + EA+ L+ M+ + D+V Y SL
Sbjct: 194 EKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSL 253
Query: 393 IKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFR------ILRVEEEVFELLDKMRE 446
I+ C ++D K +F+++++R +P T++ R L+ E+FE M E
Sbjct: 254 IRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEF---MIE 310
Query: 447 LGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKE 506
G P + TY LI C K E ++ N+M E + +Y ++I+ L +G V +
Sbjct: 311 RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVAD 370
Query: 507 AHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDLEHNQLEDDT 555
A + M+++ P+ T +L L + G + + L + L+D +
Sbjct: 371 AVEIVELMKKRRTRPDNITYNILLGGLCAK-GDLDEASKLLYLMLKDSS 418
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 140/315 (44%), Gaps = 13/315 (4%)
Query: 217 MIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF-CNKNV 275
++ Y +R G A + GF + LL LCR A LL +N
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172
Query: 276 FPLEIKSFNIILNGWCNLIVSAREAER---VWHEMSKRGIQHDVVSYASIMSCYSKSSKL 332
++ S+N ++ G+C +E E+ + +EM G +V++ ++ + K+ K+
Sbjct: 173 LMPDVFSYNTVIRGFC----EGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKM 228
Query: 333 YKVFQLFDQMKNKKITPDRKVYNAVIHALAK-GRLVKEAVNLLQTMEKNNVTPDVVTYNS 391
+ +MK + D VY ++I G L + + +E+ + +P +TYN+
Sbjct: 229 DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGD-SPCAITYNT 287
Query: 392 LIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL---RVEEEVFELLDKMRELG 448
LI+ CK ++ EA E+F M++R + P + T+ L +E +LL+ M E
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Query: 449 CYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAH 508
P TY ++I K C+ + + +I +M++ D +Y +L+ GL G + EA
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407
Query: 509 DYYIEMQRKGFLPEP 523
M + +P
Sbjct: 408 KLLYLMLKDSSYTDP 422
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 148/339 (43%), Gaps = 18/339 (5%)
Query: 157 FTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLI 216
F F + G +P +V Y +I L + K A L+ +M P+ VT I
Sbjct: 305 FEFMIERGVRP----NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYN---I 357
Query: 217 MIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFC---NK 273
+I K C V A+ K+ + + LL LC ++ +A LL+ +
Sbjct: 358 IINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDS 417
Query: 274 NVFPLEIKSFNIILNGWC--NLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSK 331
+ ++ S+N +++G C N + +A ++ + ++ D V+ +++ K+
Sbjct: 418 SYTDPDVISYNALIHGLCKENRL---HQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGD 474
Query: 332 LYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNS 391
+ K +L+ Q+ + KI + Y A+I K ++ A LL M + + P V YN
Sbjct: 475 VNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNC 534
Query: 392 LIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFR-ILRVEE--EVFELLDKMRELG 448
L+ LCK +D+A +F +M + N P + +F+ L+ + LL M G
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG 594
Query: 449 CYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHD 487
P + TY LI +F + LDE ++ M + G D
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPD 633
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 111/223 (49%), Gaps = 5/223 (2%)
Query: 317 VSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQT 376
VS + ++ CY + K F + M + + +N ++ L + +AV+LL+
Sbjct: 108 VSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLRE 167
Query: 377 MEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTF----HAFFRILR 432
M +N++ PDV +YN++I+ C+ +++++A E+ N+M + ++ T+ AF + +
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227
Query: 433 VEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYI 492
+ +E L +M+ +G + Y LIR FC +LD +++ + E G S +Y
Sbjct: 228 M-DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYN 286
Query: 493 VLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSG 535
LI G G++KEA + + M +G P T L L G
Sbjct: 287 TLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCG 329
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 5/166 (3%)
Query: 282 SFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQ 341
++ +++G+C + A+ + +M +Q V Y ++S K L + ++LF++
Sbjct: 496 TYTAMIDGFCKTGM-LNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEE 554
Query: 342 MKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRK 401
M+ PD +N +I K +K A +LL M + ++PD+ TY+ LI K
Sbjct: 555 MQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGY 614
Query: 402 IDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMREL 447
+DEA F+ M+ P + + + E DK+ EL
Sbjct: 615 LDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGET----DKLTEL 656
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/318 (19%), Positives = 125/318 (39%), Gaps = 22/318 (6%)
Query: 105 LAQDVKTILDIMHEPGSRPSEIKHKLEXXXXXXXXXXXXXXXXXIRNDWEAAFTFFLWAG 164
L D I+++M + +RP I + + + D + A
Sbjct: 367 LVADAVEIVELMKKRRTRPDNITYNI------------LLGGLCAKGDLDEASKLLYLML 414
Query: 165 KQPGYAH-SVREYHSMISILGKMRKFDTAWNLIEVM-RGGGTGPSLVTPQTLLIMIRKYC 222
K Y V Y+++I L K + A ++ +++ G G + T I++
Sbjct: 415 KDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN----ILLNSTL 470
Query: 223 AVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLE--I 280
DV +A+ + D + ++ C+ + A+ LL C V L+ +
Sbjct: 471 KAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL-CKMRVSELQPSV 529
Query: 281 KSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFD 340
+N +L+ C S +A R++ EM + DVVS+ ++ K+ + L
Sbjct: 530 FDYNCLLSSLCK-EGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLV 588
Query: 341 QMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNR 400
M ++PD Y+ +I+ K + EA++ M + PD +S++K
Sbjct: 589 GMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQG 648
Query: 401 KIDEAKEVFNDMMKRNIT 418
+ D+ E+ ++ ++I
Sbjct: 649 ETDKLTELVKKLVDKDIV 666
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 174/393 (44%), Gaps = 32/393 (8%)
Query: 154 EAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQT 213
E A F A K+ G + Y +I K +++D A L+ M G P +VT
Sbjct: 362 EVAVGFLDEASKK-GLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYG- 419
Query: 214 LLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFC-- 271
I+I + A+N G + L+S LC+ A+ LLF
Sbjct: 420 --ILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAK-LLFSEM 476
Query: 272 -NKNVFPLEIKSFNIILNGWCNLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCYSK 328
++N+ P + + +++G+ I S EA +V+ ++G++ DVV + +++ + +
Sbjct: 477 LDRNILP-DAYVYATLIDGF---IRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCR 532
Query: 329 SSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVT 388
S L + ++M + + PD+ Y+ +I K + + A+ + + MEKN P+VVT
Sbjct: 533 SGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVT 592
Query: 389 YNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMREL- 447
Y SLI C A+E F +M R++ P + T+ R L E E EL
Sbjct: 593 YTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELM 652
Query: 448 ---GCYPTIETYIMLIRKFCR---WRKLDE-----------VFKIWNMMREDGVSHDRSS 490
C P T+ L++ F + + L E + ++ M+ DG S ++
Sbjct: 653 MTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAA 712
Query: 491 YIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEP 523
Y + L ++G VK A + +M +KGF P+P
Sbjct: 713 YNSALVCLCVHGMVKTACMFQDKMVKKGFSPDP 745
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 172/445 (38%), Gaps = 82/445 (18%)
Query: 172 SVREYHSMISILGKMR--KFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGR 229
SV Y + I + G K + LIE G G P++V T+ I YC + D+
Sbjct: 202 SVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTI---IGGYCKLGDIEN 258
Query: 230 AINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL-------------FCNK--- 273
A F K GF ++ F +++ C+ + ++ LL F N
Sbjct: 259 AYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIID 318
Query: 274 -------NVFPLE-------------IKSFNIILNGWCNLIVSARE-AERVWHEMSKRGI 312
V P E + ++NI++N C +E A E SK+G+
Sbjct: 319 AKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCK--EGKKEVAVGFLDEASKKGL 376
Query: 313 QHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVN 372
+ +SYA ++ Y KS + +L QM + PD Y +IH L + +AVN
Sbjct: 377 IPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVN 436
Query: 373 LLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTF----HAFF 428
+ + V+PD YN L+ LCK + AK +F++M+ RNI P + F
Sbjct: 437 MKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFI 496
Query: 429 RI-----------LRVE-----------------------EEVFELLDKMRELGCYPTIE 454
R L VE +E +++M E P
Sbjct: 497 RSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKF 556
Query: 455 TYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEM 514
TY +I + + + + KI+ M ++ + +Y LI+G G K A + + EM
Sbjct: 557 TYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEM 616
Query: 515 QRKGFLPEPKTEQMLQAWLSGRQGT 539
Q + +P T L L+ T
Sbjct: 617 QLRDLVPNVVTYTTLIRSLAKESST 641
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 174/404 (43%), Gaps = 33/404 (8%)
Query: 152 DWEAAFTFFLWAGKQP-------GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGT 204
D E F W + G+A S S + +L + R F+ +++ +R
Sbjct: 76 DVEIGVKLFDWLSSEKKDEFFSNGFACS-----SFLKLLARYRIFNEIEDVLGNLRNENV 130
Query: 205 GPSLVTPQTLLIMIRKYCAVRDVGRAINTF-YAFKRFGFQVGIDEFQGLLSALCRYKNVQ 263
+T + L ++ Y + +A+ + Y + + + LLS L + + +
Sbjct: 131 K---LTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLG 187
Query: 264 DAEHLL--FCNKNVFPLEIKSFNIILNGWCN---LIVSAREAERVWHEMSKRGIQHDVVS 318
DA + C++ ++ S I++ G CN + V + E W +G ++V
Sbjct: 188 DARKVYDEMCDRGD-SVDNYSTCILVKGMCNEGKVEVGRKLIEGRW----GKGCIPNIVF 242
Query: 319 YASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTME 378
Y +I+ Y K + + +F ++K K P + + +I+ K + LL ++
Sbjct: 243 YNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVK 302
Query: 379 KNNVTPDVVTYNSLIKPLCKN-RKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE--- 434
+ + V N++I ++ K+D A+ + ++ + P + T++ L E
Sbjct: 303 ERGLRVSVWFLNNIIDAKYRHGYKVDPAESI-GWIIANDCKPDVATYNILINRLCKEGKK 361
Query: 435 EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVL 494
E LD+ + G P +Y LI+ +C+ ++ D K+ M E G D +Y +L
Sbjct: 362 EVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGIL 421
Query: 495 IHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWL--SGR 536
IHGL ++G + +A + +++ +G P+ ML + L +GR
Sbjct: 422 IHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGR 465
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 151/341 (44%), Gaps = 8/341 (2%)
Query: 216 IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNK 273
++I+ C +R V RAI F + L+ LC+ + + +A LL ++
Sbjct: 192 LVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSE 251
Query: 274 NVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLY 333
P + +N++++G C R ++ M +G + V+Y +++ KL
Sbjct: 252 GCSPSPV-IYNVLIDGLCKKGDLTR-VTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 309
Query: 334 KVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLI 393
K L ++M + K P+ Y +I+ L K R +AV LL +ME+ + Y+ LI
Sbjct: 310 KAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLI 369
Query: 394 KPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCY 450
L K K +EA ++ M ++ P I + L E E E+L++M GC
Sbjct: 370 SGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCL 429
Query: 451 PTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDY 510
P TY L++ F + +E ++W M + G S ++ Y VLI GL G+VKEA
Sbjct: 430 PNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMV 489
Query: 511 YIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDLEHNQL 551
+ +M G P+ + L G G+ L H L
Sbjct: 490 WSKMLTIGIKPDTVAYSSIIKGLCG-IGSMDAALKLYHEML 529
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 162/393 (41%), Gaps = 17/393 (4%)
Query: 149 IRNDWEAAFT--FFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGP 206
+ N EA + F A K + SMI FD+ L+ +R
Sbjct: 51 VENPLEAPISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIR---LEN 107
Query: 207 SLVTPQTLLIMIRKYCAVRDVGRAINTFY-AFKRFGFQVGIDEFQGLLSALCR----YKN 261
++ ++ +++ R Y +A++ F+ F + + F +L+ + ++
Sbjct: 108 RVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRG 167
Query: 262 VQDAEHLLFCNKN--VFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSY 319
++ ++++ N N + P + SFN+++ C L R E V+ M +R D +Y
Sbjct: 168 LEFYDYVVNSNMNMNISPNGL-SFNLVIKALCKLRFVDRAIE-VFRGMPERKCLPDGYTY 225
Query: 320 ASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEK 379
++M K ++ + L D+M+++ +P +YN +I L K + L+ M
Sbjct: 226 CTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFL 285
Query: 380 NNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL---RVEEE 436
P+ VTYN+LI LC K+D+A + M+ P T+ L R +
Sbjct: 286 KGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATD 345
Query: 437 VFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIH 496
LL M E G + Y +LI + K +E +W M E G + Y VL+
Sbjct: 346 AVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVD 405
Query: 497 GLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
GL GK EA + M G LP T L
Sbjct: 406 GLCREGKPNEAKEILNRMIASGCLPNAYTYSSL 438
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 185/431 (42%), Gaps = 29/431 (6%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
++ +I L K+R D A IEV RG L T ++ C + A+
Sbjct: 190 FNLVIKALCKLRFVDRA---IEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLD 246
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCNL 293
+ G + L+ LC+ ++ L+ K P E+ ++N +++G C
Sbjct: 247 EMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEV-TYNTLIHGLCLK 305
Query: 294 IVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKV 353
+ + +S + I +DV +Y ++++ K + +L M+ + ++ +
Sbjct: 306 GKLDKAVSLLERMVSSKCIPNDV-TYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHI 364
Query: 354 YNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMM 413
Y+ +I L K +EA++L + M + P++V Y+ L+ LC+ K +EAKE+ N M+
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 414 KRNITPTIRTFHA----FFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKL 469
P T+ + FF+ EE V ++ +M + GC Y +LI C ++
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAV-QVWKEMDKTGCSRNKFCYSVLIDGLCGVGRV 483
Query: 470 DEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
E +W+ M G+ D +Y +I GL G + A Y EM + EPK++ +
Sbjct: 484 KEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQ---EEPKSQPDV 540
Query: 530 QAW---LSG--RQGTEGQVTDLEHNQLED---------DTVEKKVKATPSKFDKEKAFLR 575
+ L G Q + DL ++ L+ +T + + DK ++FL
Sbjct: 541 VTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLE 600
Query: 576 EPETRRVTRDR 586
E R + R R
Sbjct: 601 ELVVRLLKRQR 611
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 145/365 (39%), Gaps = 68/365 (18%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y+++I L K D A +L+E M P+ VT TL+ + K R A+
Sbjct: 295 YNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQ---RRATDAVRLLS 351
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCN- 292
+ + G+ + + L+S L + ++A L K P I ++++++G C
Sbjct: 352 SMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKP-NIVVYSVLVDGLCRE 410
Query: 293 ------------LIVS---------------------AREAERVWHEMSKRGIQHDVVSY 319
+I S EA +VW EM K G + Y
Sbjct: 411 GKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCY 470
Query: 320 ASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTM-- 377
+ ++ ++ + ++ +M I PD Y+++I L + A+ L M
Sbjct: 471 SVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLC 530
Query: 378 -EKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILR---- 432
E+ PDVVTYN L+ LC + I A ++ N M+ R P + T + F L
Sbjct: 531 QEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSN 590
Query: 433 --------VEEEVFELLDKMR----------ELGCY--PTIETYIMLIRKFCRWRKLDEV 472
+EE V LL + R LG Y P T+ M++R+ C+ +K++
Sbjct: 591 SCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAA 650
Query: 473 F-KIW 476
K W
Sbjct: 651 IDKCW 655
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 154/326 (47%), Gaps = 32/326 (9%)
Query: 151 NDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVT 210
+++ A FF W +QPG+ H Y +M+ LG+ ++F L++ M G P+ VT
Sbjct: 337 DNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVT 396
Query: 211 PQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQ---------VGIDEFQGLLS-ALCRYK 260
L I Y + A+N F + G + + I G L A+ Y+
Sbjct: 397 YNRL---IHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQ 453
Query: 261 NVQDAEHLLFCNKNVFPLEIKSFNIILN--GWCNLIVSAREAERVWHEMSKRGIQHDVVS 318
+Q+A + + F ++++I+N G + + A R++ EM +G ++V+
Sbjct: 454 RMQEAG----LSPDTF-----TYSVIINCLGKAGHLPA---AHRLFCEMVGQGCTPNLVT 501
Query: 319 YASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTME 378
+ +++ ++K+ +L+ M+N PD+ Y+ V+ L ++EA + M+
Sbjct: 502 FNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQ 561
Query: 379 KNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHA----FFRILRVE 434
+ N PD Y L+ K +D+A + + M++ + P + T ++ F R+ R+
Sbjct: 562 RKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRM- 620
Query: 435 EEVFELLDKMRELGCYPTIETYIMLI 460
E + LL M LG +P+++TY +L+
Sbjct: 621 SEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 113/232 (48%), Gaps = 6/232 (2%)
Query: 311 GIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEA 370
G +HD +Y +++ ++ + ++ +L D+M P+ YN +IH+ + +KEA
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 371 VNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRI 430
+N+ M++ PD VTY +LI K +D A +++ M + ++P T+
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 431 LRVEEEV---FELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHD 487
L + L +M GC P + T+ ++I + R + K++ M+ G D
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533
Query: 488 RSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP-EPKTEQMLQAWLSGRQG 538
+ +Y +++ L G ++EA + EMQRK ++P EP ++ W G+ G
Sbjct: 534 KVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLW--GKAG 583
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 4/239 (1%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
E ++ EM + G + + V+Y ++ Y +++ L + +F+QM+ PDR Y +I
Sbjct: 377 EINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLI 436
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
AK + A+++ Q M++ ++PD TY+ +I L K + A +F +M+ + T
Sbjct: 437 DIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCT 496
Query: 419 PTIRTFH---AFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKI 475
P + TF+ A R E +L M+ G P TY +++ L+E +
Sbjct: 497 PNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGV 556
Query: 476 WNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE-PKTEQMLQAWL 533
+ M+ D Y +L+ G V +A +Y M + G P P +L +L
Sbjct: 557 FAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFL 615
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 136/312 (43%), Gaps = 20/312 (6%)
Query: 230 AINTFYAFKR-FGFQVGIDEFQGLLSALCRYKNVQDAEHLL------FCNKNVFPLEIKS 282
A+ FY KR GF+ + ++ L R K + LL C N +
Sbjct: 342 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTV-----T 396
Query: 283 FNIILN--GWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFD 340
+N +++ G N + +EA V+++M + G + D V+Y +++ ++K+ L ++
Sbjct: 397 YNRLIHSYGRANYL---KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQ 453
Query: 341 QMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNR 400
+M+ ++PD Y+ +I+ L K + A L M TP++VT+N +I K R
Sbjct: 454 RMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKAR 513
Query: 401 KIDEAKEVFNDMMKRNITPTIRTFHAFFRIL---RVEEEVFELLDKMRELGCYPTIETYI 457
+ A +++ DM P T+ +L EE + +M+ P Y
Sbjct: 514 NYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYG 573
Query: 458 MLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRK 517
+L+ + + +D+ ++ + M + G+ + + L+ ++ EA++ M
Sbjct: 574 LLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLAL 633
Query: 518 GFLPEPKTEQML 529
G P +T +L
Sbjct: 634 GLHPSLQTYTLL 645
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 178/393 (45%), Gaps = 25/393 (6%)
Query: 149 IRNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSL 208
+ N+ F F+ ++ + HS Y+ + L K D A + E M+ G P+
Sbjct: 79 LDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPN- 137
Query: 209 VTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDA--- 265
+ L ++ + + A T + F + LL+ L + V+DA
Sbjct: 138 --NRLLGFLVSSFAEKGKLHFA--TALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKL 193
Query: 266 --EHLLF--CNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYAS 321
EHL F CN + K+FNI++ G C + A +A + MS G + D+V+Y +
Sbjct: 194 FDEHLRFQSCN------DTKTFNILIRGLCG-VGKAEKALELLGVMSGFGCEPDIVTYNT 246
Query: 322 IMSCYSKSSKLYKVFQLFDQMKNKKI-TPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKN 380
++ + KS++L K ++F +K+ + +PD Y ++I K ++EA +LL M +
Sbjct: 247 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 306
Query: 381 NVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHA----FFRILRVEEE 436
+ P VT+N L+ K ++ A+E+ M+ P + TF + + R+ +V +
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 366
Query: 437 VFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIH 496
F L ++M G +P TY +LI C +L + ++ + + Y +I
Sbjct: 367 -FRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVID 425
Query: 497 GLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
G GKV EA+ EM++K P+ T +L
Sbjct: 426 GFCKAGKVNEANVIVEEMEKKKCKPDKITFTIL 458
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 160/356 (44%), Gaps = 49/356 (13%)
Query: 170 AHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGR 229
+ + ++ +I L + K + A L+ VM G G P +VT TL I+ +C ++ +
Sbjct: 203 CNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTL---IQGFCKSNELNK 259
Query: 230 AINTFYAFKRFGFQVGID--EFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNI 285
A F K G D + ++S C+ +++A LL ++P + +FN+
Sbjct: 260 ASEMFKDVKS-GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNV-TFNV 317
Query: 286 ILNGWCNLIVSARE---AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQM 342
+++G+ A E AE + +M G DVV++ S++ Y + ++ + F+L+++M
Sbjct: 318 LVDGY----AKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM 373
Query: 343 KNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKI 402
+ + P+ Y+ +I+AL + +A LL + ++ P YN +I CK K+
Sbjct: 374 NARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKV 433
Query: 403 DEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRK 462
+EA + +M K+ P DK+ T+ +LI
Sbjct: 434 NEANVIVEEMEKKKCKP----------------------DKI----------TFTILIIG 461
Query: 463 FCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKG 518
C ++ E I++ M G S D+ + L+ L G KEA+ + ++ RKG
Sbjct: 462 HCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAY-HLNQIARKG 516
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 178/393 (45%), Gaps = 25/393 (6%)
Query: 149 IRNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSL 208
+ N+ F F+ ++ + HS Y+ + L K D A + E M+ G P+
Sbjct: 79 LDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPN- 137
Query: 209 VTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDA--- 265
+ L ++ + + A T + F + LL+ L + V+DA
Sbjct: 138 --NRLLGFLVSSFAEKGKLHFA--TALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKL 193
Query: 266 --EHLLF--CNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYAS 321
EHL F CN + K+FNI++ G C + A +A + MS G + D+V+Y +
Sbjct: 194 FDEHLRFQSCN------DTKTFNILIRGLCG-VGKAEKALELLGVMSGFGCEPDIVTYNT 246
Query: 322 IMSCYSKSSKLYKVFQLFDQMKNKKI-TPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKN 380
++ + KS++L K ++F +K+ + +PD Y ++I K ++EA +LL M +
Sbjct: 247 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 306
Query: 381 NVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHA----FFRILRVEEE 436
+ P VT+N L+ K ++ A+E+ M+ P + TF + + R+ +V +
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 366
Query: 437 VFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIH 496
F L ++M G +P TY +LI C +L + ++ + + Y +I
Sbjct: 367 -FRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVID 425
Query: 497 GLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
G GKV EA+ EM++K P+ T +L
Sbjct: 426 GFCKAGKVNEANVIVEEMEKKKCKPDKITFTIL 458
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 160/356 (44%), Gaps = 49/356 (13%)
Query: 170 AHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGR 229
+ + ++ +I L + K + A L+ VM G G P +VT TL I+ +C ++ +
Sbjct: 203 CNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTL---IQGFCKSNELNK 259
Query: 230 AINTFYAFKRFGFQVGID--EFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNI 285
A F K G D + ++S C+ +++A LL ++P + +FN+
Sbjct: 260 ASEMFKDVKS-GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNV-TFNV 317
Query: 286 ILNGWCNLIVSARE---AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQM 342
+++G+ A E AE + +M G DVV++ S++ Y + ++ + F+L+++M
Sbjct: 318 LVDGY----AKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM 373
Query: 343 KNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKI 402
+ + P+ Y+ +I+AL + +A LL + ++ P YN +I CK K+
Sbjct: 374 NARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKV 433
Query: 403 DEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRK 462
+EA + +M K+ P DK+ T+ +LI
Sbjct: 434 NEANVIVEEMEKKKCKP----------------------DKI----------TFTILIIG 461
Query: 463 FCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKG 518
C ++ E I++ M G S D+ + L+ L G KEA+ + ++ RKG
Sbjct: 462 HCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAY-HLNQIARKG 516
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 167/373 (44%), Gaps = 18/373 (4%)
Query: 156 AFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLL 215
A FF + H+ + MI L + D+ L++ M+ G S +
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCS---EDLFI 115
Query: 216 IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF--CNK 273
+I Y V RA+ FY K FG + + +L L +Q ++++ +
Sbjct: 116 SVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMI-YMVYRDMKR 174
Query: 274 NVFPLEIKSFNIILNGWC-NLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKL 332
+ F + ++N++L C N V A+++ EMS +G D VSY +++S + +
Sbjct: 175 DGFEPNVFTYNVLLKALCKNNKVDG--AKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLV 232
Query: 333 YKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSL 392
+ +L ++ + P VYNA+I+ L K K A L++ M + ++P+V++Y++L
Sbjct: 233 KEGRELAERFE-----PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTL 287
Query: 393 IKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLD----KMRELG 448
I LC + +I+ A M+KR P I T + + + F+ LD +R G
Sbjct: 288 INVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFG 347
Query: 449 CYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAH 508
P + Y L++ FC + + +++ M E G S + +Y LI+G G + A
Sbjct: 348 LQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAV 407
Query: 509 DYYIEMQRKGFLP 521
+ +M G P
Sbjct: 408 YIWNKMLTSGCCP 420
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 175/424 (41%), Gaps = 50/424 (11%)
Query: 165 KQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLL--------- 215
K+ G+ +V Y+ ++ L K K D A L+ M G P V+ T++
Sbjct: 173 KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLV 232
Query: 216 ------------------IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALC 257
+I C D A G + + L++ LC
Sbjct: 233 KEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLC 292
Query: 258 RYKNVQDAEHLLF------CNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKR- 310
++ A L C+ N++ L L G + +A +W++M +
Sbjct: 293 NSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRG------TTFDALDLWNQMIRGF 346
Query: 311 GIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEA 370
G+Q +VV+Y +++ + + K +F M+ +P+ + Y ++I+ AK + A
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGA 406
Query: 371 VNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRI 430
V + M + P+VV Y ++++ LC++ K EA+ + M K N P++ TF+AF +
Sbjct: 407 VYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKG 466
Query: 431 L----RVE--EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGV 484
L R++ E+VF +++ C P I TY L+ + +++E + + + GV
Sbjct: 467 LCDAGRLDWAEKVFRQMEQQHR--CPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGV 524
Query: 485 SHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQM--LQAWLSGRQGTEGQ 542
S+Y L+HG G A +M G P+ T M L G+ Q
Sbjct: 525 EWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQ 584
Query: 543 VTDL 546
+ DL
Sbjct: 585 MLDL 588
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 142/319 (44%), Gaps = 60/319 (18%)
Query: 193 WNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGL 252
WN +++RG G P++V TL ++ +C+ ++ +A++ F + G I + L
Sbjct: 339 WN--QMIRGFGLQPNVVAYNTL---VQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSL 393
Query: 253 LS-----------------------------------ALCRYKNVQDAEHLL--FCNKNV 275
++ ALCR+ ++AE L+ +N
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENC 453
Query: 276 FPLEIKSFNIILNGWCNLIVSARE--AERVWHEMSKRGIQH----DVVSYASIMSCYSKS 329
P + +FN + G C+ + R AE+V+ +M + QH ++V+Y ++ +K+
Sbjct: 454 AP-SVPTFNAFIKGLCD---AGRLDWAEKVFRQMEQ---QHRCPPNIVTYNELLDGLAKA 506
Query: 330 SKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTY 389
+++ + + L ++ + + YN ++H L A+ L+ M + +PD +T
Sbjct: 507 NRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITM 566
Query: 390 NSLIKPLCKNRKIDEAKEVFN--DMMKRNITPTIRTF-HAFFRILR--VEEEVFELLDKM 444
N +I CK K + A ++ + +R P + ++ + + + R E+ LL++M
Sbjct: 567 NMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERM 626
Query: 445 RELGCYPTIETYIMLIRKF 463
G P+I T+ +LI F
Sbjct: 627 ISAGIVPSIATWSVLINCF 645
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 81/172 (47%), Gaps = 8/172 (4%)
Query: 357 VIHALAKGRLVKEAVNLLQTMEKNNV---TPDVVTYNSLIKPLCKNRKIDEAKEVFNDMM 413
V+ L + V A++ +++ +N+ TP +T+ +I+ L + ++D + + M
Sbjct: 46 VVKRLRQESCVPLALHFFKSIANSNLFKHTP--LTFEVMIRKLAMDGQVDSVQYLLQQMK 103
Query: 414 KRNITPTIRTFHAFFRILR---VEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLD 470
+ + F + + R + E E+ +++E GC P+++ Y ++ ++
Sbjct: 104 LQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQ 163
Query: 471 EVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
++ ++ M+ DG + +Y VL+ L N KV A +EM KG P+
Sbjct: 164 MIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPD 215
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 112/279 (40%), Gaps = 12/279 (4%)
Query: 165 KQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAV 224
++ G + ++R Y S+I+ K D A + M G P++V M+ C
Sbjct: 379 EEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTN---MVEALCRH 435
Query: 225 RDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKS 282
A + + + F + LC + AE + ++ P I +
Sbjct: 436 SKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVT 495
Query: 283 FNIILNGWCNLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFD 340
+N +L+G L + R EA + E+ RG++ +Y +++ + QL
Sbjct: 496 YNELLDG---LAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVG 552
Query: 341 QMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTME--KNNVTPDVVTYNSLIKPLCK 398
+M +PD N +I A K + A +L + + PDV++Y ++I LC+
Sbjct: 553 KMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCR 612
Query: 399 NRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEV 437
+ ++ + M+ I P+I T+ +++ V
Sbjct: 613 SNCREDGVILLERMISAGIVPSIATWSVLINCFILDDIV 651
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 111/464 (23%), Positives = 198/464 (42%), Gaps = 67/464 (14%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
+++++S LG+ +L+ M P +VT L I+I C R V A+ F
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVT---LGILINTLCKSRRVDEALEVFE 353
Query: 236 AF--KRF--GFQVGIDE--FQGLLSALCRYKNVQDAEHLLF-------CNKNVFPLEIKS 282
KR G + D F L+ LC+ +++AE LL C N +
Sbjct: 354 KMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAV-----T 408
Query: 283 FNIILNGWC---------------------------NLIVSA-------REAERVWHEMS 308
+N +++G+C N IV A + +M
Sbjct: 409 YNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDME 468
Query: 309 KRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVK 368
K G++ +VV+Y +++ S + K +++M +PD K+Y A+I L + R
Sbjct: 469 KEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDH 528
Query: 369 EAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITP---TIRTFH 425
+A+ +++ +++ + D++ YN LI C ++ E+ DM K P T T
Sbjct: 529 DAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLI 588
Query: 426 AFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIW-NMMREDGV 484
+FF + E V ++++MRE G PT+ TY +I +C +LDE K++ +M V
Sbjct: 589 SFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKV 648
Query: 485 SHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVT 544
+ + Y +LI+ G +A EM+ K P +T L L+ + T+G+
Sbjct: 649 NPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLN--EKTQGETL 706
Query: 545 DLEHNQLEDDTVEKKVKATPSKFDKEKAFLREPETRRVTRDRGF 588
+L D+ VE+ + P++ E R + + + R F
Sbjct: 707 ----LKLMDEMVEQSCE--PNQITMEILMERLSGSDELVKLRKF 744
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 135/290 (46%), Gaps = 18/290 (6%)
Query: 199 MRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCR 258
M G ++VT TL I C+V +V +A+ + G + L+S LC+
Sbjct: 467 MEKEGVKGNVVTYMTL---IHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 259 YKNVQDAEHLLF-CNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWH---EMSKRGIQH 314
+ DA ++ + F L++ ++N+++ +C+ E+V+ +M K G +
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD----KNNTEKVYEMLTDMEKEGKKP 579
Query: 315 DVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLL 374
D ++Y +++S + K V ++ +QM+ + P Y AVI A + EA+ L
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 375 QTME-KNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRV 433
+ M + V P+ V YN LI K +A + +M + + P + T++A F+ L
Sbjct: 640 KDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNE 699
Query: 434 E---EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMR 480
+ E + +L+D+M E C P T +L+ R DE+ K+ M+
Sbjct: 700 KTQGETLLKLMDEMVEQSCEPNQITMEILME---RLSGSDELVKLRKFMQ 746
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 137/284 (48%), Gaps = 20/284 (7%)
Query: 252 LLSALCRYKNVQDAEHLL---FCNKNVFPLEIKSFNIILNG-WCNLIVSAREAERVWHEM 307
++ L R V DA +L ++VFP + +I+L+ W +++ + +
Sbjct: 191 VVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRF 250
Query: 308 SKRGIQHDVVSYASIMSCYSKSSKLYKVFQLF-DQMKNKKITP-DRKVYNAVIHALAKGR 365
S G+ + V +S K+++ + + D MKNK TP + +NA++ L +
Sbjct: 251 SSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNK--TPLEAPPFNALLSCLGRNM 308
Query: 366 LVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITP--TIRT 423
+ +L+ M++ + PDVVT LI LCK+R++DEA EVF M + I+
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKA 368
Query: 424 FHAFFRIL--------RVEEEVFELLDKMR-ELGCYPTIETYIMLIRKFCRWRKLDEVFK 474
F L R+ +E ELL +M+ E C P TY LI +CR KL+ +
Sbjct: 369 DSIHFNTLIDGLCKVGRL-KEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKE 427
Query: 475 IWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKG 518
+ + M+ED + + + ++ G+ + + A ++++M+++G
Sbjct: 428 VVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG 471
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 125/289 (43%), Gaps = 11/289 (3%)
Query: 156 AFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLL 215
A FF+ K+ G +V Y ++I + + A E M G P +
Sbjct: 460 AVVFFMDMEKE-GVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPD---AKIYY 515
Query: 216 IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNV 275
+I C VR AI K GF + + + L+ C N + +L ++
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEML---TDM 572
Query: 276 FPLEIKSFNIILNGWCNLIVSARE---AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKL 332
K +I N + ++ ER+ +M + G+ V +Y +++ Y +L
Sbjct: 573 EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGEL 632
Query: 333 YKVFQLFDQMK-NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNS 391
+ +LF M + K+ P+ +YN +I+A +K +A++L + M+ V P+V TYN+
Sbjct: 633 DEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNA 692
Query: 392 LIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFEL 440
L K L + + + ++ ++M++++ P T L +E+ +L
Sbjct: 693 LFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKL 741
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 161/374 (43%), Gaps = 41/374 (10%)
Query: 150 RNDWEAAFTFFLWAGKQPGYAHSVREYHS-MISILGKMRKFDTAWNLIEVMRGGGTGPSL 208
RN+ + A F+ +A K+ + + S MIS LG+ K A + E GG G ++
Sbjct: 209 RNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTV 268
Query: 209 VTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHL 268
L I Y AI+ F + K + GL L Y V DA
Sbjct: 269 YAFSAL---ISAYGRSGLHEEAISVFNSMKEY----------GLRPNLVTYNAVIDA--- 312
Query: 269 LFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSK 328
C K +E K + + + EM + G+Q D +++ S+++ S+
Sbjct: 313 --CGKG--GMEFK-----------------QVAKFFDEMQRNGVQPDRITFNSLLAVCSR 351
Query: 329 SSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVT 388
LFD+M N++I D YN ++ A+ KG + A +L M + P+VV+
Sbjct: 352 GGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVS 411
Query: 389 YNSLIKPLCKNRKIDEAKEVFNDMMKRNIT---PTIRTFHAFFRILRVEEEVFELLDKMR 445
Y+++I K + DEA +F +M I + T + + + EE ++L +M
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMA 471
Query: 446 ELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVK 505
+G + TY L+ + + K DEV K++ M+ + V + +Y LI G G K
Sbjct: 472 SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYK 531
Query: 506 EAHDYYIEMQRKGF 519
EA + + E + G
Sbjct: 532 EAMEIFREFKSAGL 545
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 177/398 (44%), Gaps = 17/398 (4%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
GY ++V + ++IS G+ + A ++ M+ G P+LVT ++ K +
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGK--GGMEF 320
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF---CNKNVFPLEIKSFN 284
+ F +R G Q F LL A+C + +A LF N+ + ++ S+N
Sbjct: 321 KQVAKFFDEMQRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRI-EQDVFSYN 378
Query: 285 IILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKN 344
+L+ C A + +M + I +VVSY++++ ++K+ + + LF +M+
Sbjct: 379 TLLDAICK-GGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY 437
Query: 345 KKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDE 404
I DR YN ++ K +EA+++L+ M + DVVTYN+L+ K K DE
Sbjct: 438 LGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDE 497
Query: 405 AKEVFNDMMKRNITPTIRTFHAF---FRILRVEEEVFELLDKMRELGCYPTIETYIMLIR 461
K+VF +M + ++ P + T+ + + +E E+ + + G + Y LI
Sbjct: 498 VKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALID 557
Query: 462 KFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
C+ + + + M ++G+S + +Y +I + + + DY G LP
Sbjct: 558 ALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADY----SNGGSLP 613
Query: 522 EPKTEQMLQAWLSGRQGTE--GQVTDLEHNQLEDDTVE 557
+ G + + GQ+T +N+ D E
Sbjct: 614 FSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEE 651
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 118/248 (47%), Gaps = 5/248 (2%)
Query: 300 AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIH 359
A+R++ G + V ++++++S Y +S + +F+ MK + P+ YNAVI
Sbjct: 252 AKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID 311
Query: 360 ALAKGRL-VKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
A KG + K+ M++N V PD +T+NSL+ + + A+ +F++M R I
Sbjct: 312 ACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIE 371
Query: 419 PTIRTFHAFFRILRVEEEV---FELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKI 475
+ +++ + ++ FE+L +M P + +Y +I F + + DE +
Sbjct: 372 QDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNL 431
Query: 476 WNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSG 535
+ MR G++ DR SY L+ G+ +EA D EM G + T L G
Sbjct: 432 FGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGY-G 490
Query: 536 RQGTEGQV 543
+QG +V
Sbjct: 491 KQGKYDEV 498
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 199/456 (43%), Gaps = 52/456 (11%)
Query: 165 KQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGG-GTGPSLVTPQTLLIMIRKYCA 223
KQ G + SV ++S++SIL K + A +L + MR G P T TL I +C
Sbjct: 165 KQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTL---INGFCK 221
Query: 224 VRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFC----NKNVFPLE 279
V A F + + + + ++ LCR V+ A ++L +V P
Sbjct: 222 NSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHP-N 280
Query: 280 IKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLF 339
+ S+ ++ G+C + EA V+H+M RG++ + V+Y +++ S++ + +
Sbjct: 281 VVSYTTLVRGYC-MKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHR-------Y 332
Query: 340 DQMKNKKI---------TPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYN 390
D++K+ I PD +N +I A + A+ + Q M + PD +Y+
Sbjct: 333 DEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYS 392
Query: 391 SLIKPLCKNRKIDEAKEVFNDMMKRNI-------TPTIRTFHAFFRIL------RVEEEV 437
LI+ LC + D A+ +FN++ ++ + P ++ F L + E+V
Sbjct: 393 VLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKV 452
Query: 438 FELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHG 497
F L K R + P+ +T LI CR K +++ +M D +Y +LI G
Sbjct: 453 FRQLMK-RGVQDPPSYKT---LITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDG 508
Query: 498 LFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQ---VTDLEHNQLED- 553
L G+ AHD M R +LP T + A L+ R+ VT + ++
Sbjct: 509 LLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQN 568
Query: 554 -DTVEKKVKATPSKFDKEKAFLREPETRRVTRDRGF 588
D + V+ S KEKAFL R+ D G+
Sbjct: 569 IDLSTQVVRLLFSSAQKEKAFL----IVRLLYDNGY 600
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 175/430 (40%), Gaps = 70/430 (16%)
Query: 159 FFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWN------------------------ 194
FF W + G++H + + M+ LG+ R + A N
Sbjct: 87 FFDWVSNK-GFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLI 145
Query: 195 --------------LIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKR- 239
L + M+ G PS++T +LL ++ K G A + F +R
Sbjct: 146 RSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKR---GRTGMAHDLFDEMRRT 202
Query: 240 FGFQVGIDEFQGLLSALCRYKNVQDA------EHLLFCNKNVFPLEIKSFNIILNGWCNL 293
+G F L++ C+ V +A L CN +V ++N I++G C
Sbjct: 203 YGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVV-----TYNTIIDGLCR- 256
Query: 294 IVSAREAERVWHEMSKRG--IQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDR 351
+ A V M K+ + +VVSY +++ Y ++ + +F M ++ + P+
Sbjct: 257 AGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNA 316
Query: 352 KVYNAVIHALAKGRLVKEAVNLLQTMEKNNVT--PDVVTYNSLIKPLCKNRKIDEAKEVF 409
YN +I L++ E ++L T PD T+N LIK C +D A +VF
Sbjct: 317 VTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVF 376
Query: 410 NDMMKRNITPTIRTFHAFFRIL-------RVEEEVFELLDKMRELG---CYPTIETYIML 459
+M+ + P ++ R L R E EL +K LG C P Y +
Sbjct: 377 QEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPM 436
Query: 460 IRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGF 519
C K + K++ + + GV D SY LI G GK K A++ + M R+ F
Sbjct: 437 FEYLCANGKTKQAEKVFRQLMKRGV-QDPPSYKTLITGHCREGKFKPAYELLVLMLRREF 495
Query: 520 LPEPKTEQML 529
+P+ +T ++L
Sbjct: 496 VPDLETYELL 505
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 153/377 (40%), Gaps = 52/377 (13%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQ--TLLIMIRKYCAVRDVGRAINT 233
Y+++I L + ++D + +++ GG + P T I+I+ +C + A+
Sbjct: 319 YNTLIKGLSEAHRYD---EIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKV 375
Query: 234 FYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHL---------LFCNKNVFPLEIKSFN 284
F + L+ LC AE L L PL ++N
Sbjct: 376 FQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLA-AAYN 434
Query: 285 IILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKN 344
+ C ++AE+V+ ++ KRG+Q D SY ++++ + + K ++L M
Sbjct: 435 PMFEYLCA-NGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLR 492
Query: 345 KKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDE 404
++ PD + Y +I L K A + LQ M +++ P T++S++ L K + +E
Sbjct: 493 REFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANE 552
Query: 405 AKEVFNDMMKRNITPTIRTFHAFFRIL---RVEEEVFEL---------LDKMRELGCYPT 452
+ + M+++ I I R+L +E+ F + L KM EL Y
Sbjct: 553 SFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLC 612
Query: 453 -----------------------IETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRS 489
I+T +I C+ ++ E F ++N + E G S
Sbjct: 613 ENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLS 672
Query: 490 SYIVLIHGLFLNGKVKE 506
++VL + L GK +E
Sbjct: 673 CHVVLRNALEAAGKWEE 689
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 7/190 (3%)
Query: 336 FQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNN---VTPDVVTYNSL 392
+ FD + NK + + + ++ L + R + A N L ++E+ + V +NSL
Sbjct: 85 LRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSL 144
Query: 393 IKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEE---VFELLDKMRE-LG 448
I+ E+ ++F M + I+P++ TF++ IL +L D+MR G
Sbjct: 145 IRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYG 204
Query: 449 CYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAH 508
P T+ LI FC+ +DE F+I+ M + D +Y +I GL GKVK AH
Sbjct: 205 VTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAH 264
Query: 509 DYYIEMQRKG 518
+ M +K
Sbjct: 265 NVLSGMLKKA 274
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 154/339 (45%), Gaps = 31/339 (9%)
Query: 151 NDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVT 210
ND+ A FF W +QPG+ H Y +M+ LG+ ++F L++ M G P+ VT
Sbjct: 342 NDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVT 401
Query: 211 PQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQ---------VGIDEFQGLLS-ALCRYK 260
L I Y + A+N F + G + + I G L A+ Y+
Sbjct: 402 YNRL---IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQ 458
Query: 261 NVQDAEHLLFCNKNVFPLEIKSFNIILN--GWCNLIVSAREAERVWHEMSKRGIQHDVVS 318
+Q + P + ++++I+N G + + A +++ EM +G ++V+
Sbjct: 459 RMQAG--------GLSP-DTFTYSVIINCLGKAGHLPA---AHKLFCEMVDQGCTPNLVT 506
Query: 319 YASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTME 378
Y +M ++K+ +L+ M+N PD+ Y+ V+ L ++EA + M+
Sbjct: 507 YNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQ 566
Query: 379 KNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFR-ILRVEE-- 435
+ N PD Y L+ K +++A + + M+ + P + T ++ LRV +
Sbjct: 567 QKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIA 626
Query: 436 EVFELLDKMRELGCYPTIETYIMLIRKFCRWR-KLDEVF 473
E +ELL M LG P+++TY +L+ R KLD F
Sbjct: 627 EAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGF 665
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 109/236 (46%), Gaps = 4/236 (1%)
Query: 302 RVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHAL 361
++ EM + G Q + V+Y ++ Y +++ L + +F+QM+ PDR Y +I
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 362 AKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTI 421
AK + A+++ Q M+ ++PD TY+ +I L K + A ++F +M+ + TP +
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 422 RTFHAFFRI---LRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNM 478
T++ + R + +L M+ G P TY +++ L+E ++
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE 564
Query: 479 MREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE-PKTEQMLQAWL 533
M++ D Y +L+ G V++A +Y M G P P +L +L
Sbjct: 565 MQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFL 620
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 142/336 (42%), Gaps = 26/336 (7%)
Query: 212 QTLLIMIRKYCA------VRDVGRAINTFYAFKR-FGFQVGIDEFQGLLSALCRYKNVQD 264
Q L + I Y A + D G A+ FY KR GF+ + ++ L R K
Sbjct: 323 QNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGA 382
Query: 265 AEHLL------FCNKNVFPLEIKSFNIILN--GWCNLIVSAREAERVWHEMSKRGIQHDV 316
LL C N ++N +++ G N + EA V+++M + G + D
Sbjct: 383 INKLLDEMVRDGCQPNTV-----TYNRLIHSYGRANYL---NEAMNVFNQMQEAGCKPDR 434
Query: 317 VSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQT 376
V+Y +++ ++K+ L ++ +M+ ++PD Y+ +I+ L K + A L
Sbjct: 435 VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 377 MEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL---RV 433
M TP++VTYN ++ K R A +++ DM P T+ +L
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 434 EEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIV 493
EE + +M++ P Y +L+ + + +++ ++ + M G+ + +
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 494 LIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
L+ K+ EA++ M G P +T +L
Sbjct: 615 LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLL 650
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 154/339 (45%), Gaps = 31/339 (9%)
Query: 151 NDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVT 210
ND+ A FF W +QPG+ H Y +M+ LG+ ++F L++ M G P+ VT
Sbjct: 342 NDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVT 401
Query: 211 PQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQ---------VGIDEFQGLLS-ALCRYK 260
L I Y + A+N F + G + + I G L A+ Y+
Sbjct: 402 YNRL---IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQ 458
Query: 261 NVQDAEHLLFCNKNVFPLEIKSFNIILN--GWCNLIVSAREAERVWHEMSKRGIQHDVVS 318
+Q + P + ++++I+N G + + A +++ EM +G ++V+
Sbjct: 459 RMQAG--------GLSP-DTFTYSVIINCLGKAGHLPA---AHKLFCEMVDQGCTPNLVT 506
Query: 319 YASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTME 378
Y +M ++K+ +L+ M+N PD+ Y+ V+ L ++EA + M+
Sbjct: 507 YNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQ 566
Query: 379 KNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFR-ILRVEE-- 435
+ N PD Y L+ K +++A + + M+ + P + T ++ LRV +
Sbjct: 567 QKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIA 626
Query: 436 EVFELLDKMRELGCYPTIETYIMLIRKFCRWR-KLDEVF 473
E +ELL M LG P+++TY +L+ R KLD F
Sbjct: 627 EAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGF 665
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 109/236 (46%), Gaps = 4/236 (1%)
Query: 302 RVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHAL 361
++ EM + G Q + V+Y ++ Y +++ L + +F+QM+ PDR Y +I
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 362 AKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTI 421
AK + A+++ Q M+ ++PD TY+ +I L K + A ++F +M+ + TP +
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 422 RTFHAFFRI---LRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNM 478
T++ + R + +L M+ G P TY +++ L+E ++
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE 564
Query: 479 MREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE-PKTEQMLQAWL 533
M++ D Y +L+ G V++A +Y M G P P +L +L
Sbjct: 565 MQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFL 620
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 142/336 (42%), Gaps = 26/336 (7%)
Query: 212 QTLLIMIRKYCA------VRDVGRAINTFYAFKR-FGFQVGIDEFQGLLSALCRYKNVQD 264
Q L + I Y A + D G A+ FY KR GF+ + ++ L R K
Sbjct: 323 QNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGA 382
Query: 265 AEHLL------FCNKNVFPLEIKSFNIILN--GWCNLIVSAREAERVWHEMSKRGIQHDV 316
LL C N ++N +++ G N + EA V+++M + G + D
Sbjct: 383 INKLLDEMVRDGCQPNTV-----TYNRLIHSYGRANYL---NEAMNVFNQMQEAGCKPDR 434
Query: 317 VSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQT 376
V+Y +++ ++K+ L ++ +M+ ++PD Y+ +I+ L K + A L
Sbjct: 435 VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 377 MEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL---RV 433
M TP++VTYN ++ K R A +++ DM P T+ +L
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 434 EEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIV 493
EE + +M++ P Y +L+ + + +++ ++ + M G+ + +
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 494 LIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
L+ K+ EA++ M G P +T +L
Sbjct: 615 LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLL 650
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 154/339 (45%), Gaps = 31/339 (9%)
Query: 151 NDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVT 210
ND+ A FF W +QPG+ H Y +M+ LG+ ++F L++ M G P+ VT
Sbjct: 342 NDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVT 401
Query: 211 PQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQ---------VGIDEFQGLLS-ALCRYK 260
L I Y + A+N F + G + + I G L A+ Y+
Sbjct: 402 YNRL---IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQ 458
Query: 261 NVQDAEHLLFCNKNVFPLEIKSFNIILN--GWCNLIVSAREAERVWHEMSKRGIQHDVVS 318
+Q + P + ++++I+N G + + A +++ EM +G ++V+
Sbjct: 459 RMQAG--------GLSP-DTFTYSVIINCLGKAGHLPA---AHKLFCEMVDQGCTPNLVT 506
Query: 319 YASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTME 378
Y +M ++K+ +L+ M+N PD+ Y+ V+ L ++EA + M+
Sbjct: 507 YNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQ 566
Query: 379 KNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFR-ILRVEE-- 435
+ N PD Y L+ K +++A + + M+ + P + T ++ LRV +
Sbjct: 567 QKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIA 626
Query: 436 EVFELLDKMRELGCYPTIETYIMLIRKFCRWR-KLDEVF 473
E +ELL M LG P+++TY +L+ R KLD F
Sbjct: 627 EAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGF 665
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 109/236 (46%), Gaps = 4/236 (1%)
Query: 302 RVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHAL 361
++ EM + G Q + V+Y ++ Y +++ L + +F+QM+ PDR Y +I
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 362 AKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTI 421
AK + A+++ Q M+ ++PD TY+ +I L K + A ++F +M+ + TP +
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 422 RTFHAFFRI---LRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNM 478
T++ + R + +L M+ G P TY +++ L+E ++
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE 564
Query: 479 MREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE-PKTEQMLQAWL 533
M++ D Y +L+ G V++A +Y M G P P +L +L
Sbjct: 565 MQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFL 620
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 142/336 (42%), Gaps = 26/336 (7%)
Query: 212 QTLLIMIRKYCA------VRDVGRAINTFYAFKR-FGFQVGIDEFQGLLSALCRYKNVQD 264
Q L + I Y A + D G A+ FY KR GF+ + ++ L R K
Sbjct: 323 QNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGA 382
Query: 265 AEHLL------FCNKNVFPLEIKSFNIILN--GWCNLIVSAREAERVWHEMSKRGIQHDV 316
LL C N ++N +++ G N + EA V+++M + G + D
Sbjct: 383 INKLLDEMVRDGCQPNTV-----TYNRLIHSYGRANYL---NEAMNVFNQMQEAGCKPDR 434
Query: 317 VSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQT 376
V+Y +++ ++K+ L ++ +M+ ++PD Y+ +I+ L K + A L
Sbjct: 435 VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 377 MEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL---RV 433
M TP++VTYN ++ K R A +++ DM P T+ +L
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 434 EEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIV 493
EE + +M++ P Y +L+ + + +++ ++ + M G+ + +
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 494 LIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
L+ K+ EA++ M G P +T +L
Sbjct: 615 LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLL 650
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 199/460 (43%), Gaps = 59/460 (12%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
+++++S LG+ +L+ M P +VT L I+I C R V A+ F
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVT---LGILINTLCKSRRVDEALEVFE 353
Query: 236 AF--KRF--GFQVGIDE--FQGLLSALCRYKNVQDAEHLLF---CNKNVFPLEIKSFNII 286
KR G + D F L+ LC+ +++AE LL + P + ++N +
Sbjct: 354 QMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAV-TYNCL 412
Query: 287 LNGWC---------------------------NLIVSA-------REAERVWHEMSKRGI 312
++G+C N IV A + +M K G+
Sbjct: 413 IDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV 472
Query: 313 QHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVN 372
+ +VV+Y +++ S + K +++M +PD K+Y A+I L + R +A+
Sbjct: 473 KGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIR 532
Query: 373 LLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITP---TIRTFHAFFR 429
+++ +++ + D++ YN LI C ++ E+ DM K P T T +FF
Sbjct: 533 VVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFG 592
Query: 430 ILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIW-NMMREDGVSHDR 488
+ E V ++++MRE G PT+ TY +I +C +LDE K++ +M V+ +
Sbjct: 593 KHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNT 652
Query: 489 SSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDLEH 548
Y +LI+ G +A EM+ K P +T L L+ + T+G+
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLN--EKTQGETL---- 706
Query: 549 NQLEDDTVEKKVKATPSKFDKEKAFLREPETRRVTRDRGF 588
+L D+ VE+ + P++ E R + + + R F
Sbjct: 707 LKLMDEMVEQSCE--PNQITMEILMERLSGSDELVKLRKF 744
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 136/290 (46%), Gaps = 18/290 (6%)
Query: 199 MRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCR 258
M G ++VT TL I C+V +V +A+ + G + L+S LC+
Sbjct: 467 MEKEGVKGNVVTYMTL---IHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 259 YKNVQDAEHLLF-CNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWH---EMSKRGIQH 314
+ DA ++ + F L++ ++N+++ +C+ AE+V+ +M K G +
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD----KNNAEKVYEMLTDMEKEGKKP 579
Query: 315 DVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLL 374
D ++Y +++S + K V ++ +QM+ + P Y AVI A + EA+ L
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 375 QTME-KNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRV 433
+ M + V P+ V YN LI K +A + +M + + P + T++A F+ L
Sbjct: 640 KDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNE 699
Query: 434 E---EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMR 480
+ E + +L+D+M E C P T +L+ R DE+ K+ M+
Sbjct: 700 KTQGETLLKLMDEMVEQSCEPNQITMEILME---RLSGSDELVKLRKFMQ 746
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 137/284 (48%), Gaps = 20/284 (7%)
Query: 252 LLSALCRYKNVQDAEHLL---FCNKNVFPLEIKSFNIILNG-WCNLIVSAREAERVWHEM 307
++ L R V DA +L ++VFP + +I+L+ W +++ + +
Sbjct: 191 VVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRF 250
Query: 308 SKRGIQHDVVSYASIMSCYSKSSKLYKVFQLF-DQMKNKKITP-DRKVYNAVIHALAKGR 365
S G+ + V +S K+++ + + D MKNK TP + +NA++ L +
Sbjct: 251 SSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNK--TPLEAPPFNALLSCLGRNM 308
Query: 366 LVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITP--TIRT 423
+ +L+ M++ + PDVVT LI LCK+R++DEA EVF M + I+
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKA 368
Query: 424 FHAFFRIL--------RVEEEVFELLDKMR-ELGCYPTIETYIMLIRKFCRWRKLDEVFK 474
F L R+ +E ELL +M+ E C P TY LI +CR KL+ +
Sbjct: 369 DSIHFNTLIDGLCKVGRL-KEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKE 427
Query: 475 IWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKG 518
+ + M+ED + + + ++ G+ + + A ++++M+++G
Sbjct: 428 VVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG 471
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 125/289 (43%), Gaps = 11/289 (3%)
Query: 156 AFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLL 215
A FF+ K+ G +V Y ++I + + A E M G P +
Sbjct: 460 AVVFFMDMEKE-GVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPD---AKIYY 515
Query: 216 IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNV 275
+I C VR AI K GF + + + L+ C N + +L ++
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEML---TDM 572
Query: 276 FPLEIKSFNIILNGWCNLIVSARE---AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKL 332
K +I N + ++ ER+ +M + G+ V +Y +++ Y +L
Sbjct: 573 EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGEL 632
Query: 333 YKVFQLFDQMK-NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNS 391
+ +LF M + K+ P+ +YN +I+A +K +A++L + M+ V P+V TYN+
Sbjct: 633 DEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNA 692
Query: 392 LIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFEL 440
L K L + + + ++ ++M++++ P T L +E+ +L
Sbjct: 693 LFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKL 741
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 191/439 (43%), Gaps = 57/439 (12%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
+++++S LG+ +L+ M P +VT L I+I C R V A+ F
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVT---LGILINTLCKSRRVDEALEVFE 353
Query: 236 AF--KRF--GFQVGIDE--FQGLLSALCRYKNVQDAEHLLF---CNKNVFPLEIKSFNII 286
KR G + D F L+ LC+ +++AE LL + P + ++N +
Sbjct: 354 QMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAV-TYNCL 412
Query: 287 LNGWC---------------------------NLIVSA-------REAERVWHEMSKRGI 312
++G+C N IV A + +M K G+
Sbjct: 413 IDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV 472
Query: 313 QHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVN 372
+ +VV+Y +++ S + K +++M +PD K+Y A+I L + R +A+
Sbjct: 473 KGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIR 532
Query: 373 LLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITP---TIRTFHAFFR 429
+++ +++ + D++ YN LI C ++ E+ DM K P T T +FF
Sbjct: 533 VVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFG 592
Query: 430 ILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIW-NMMREDGVSHDR 488
+ E V ++++MRE G PT+ TY +I +C +LDE K++ +M V+ +
Sbjct: 593 KHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNT 652
Query: 489 SSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDLEH 548
Y +LI+ G +A EM+ K P +T L L+ + T+G+
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLN--EKTQGETL---- 706
Query: 549 NQLEDDTVEKKVKATPSKF 567
+L D+ VE V S++
Sbjct: 707 LKLMDEMVEHLVNQIRSQW 725
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 137/284 (48%), Gaps = 20/284 (7%)
Query: 252 LLSALCRYKNVQDAEHLL---FCNKNVFPLEIKSFNIILNG-WCNLIVSAREAERVWHEM 307
++ L R V DA +L ++VFP + +I+L+ W +++ + +
Sbjct: 191 VVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRF 250
Query: 308 SKRGIQHDVVSYASIMSCYSKSSKLYKVFQLF-DQMKNKKITP-DRKVYNAVIHALAKGR 365
S G+ + V +S K+++ + + D MKNK TP + +NA++ L +
Sbjct: 251 SSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNK--TPLEAPPFNALLSCLGRNM 308
Query: 366 LVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITP--TIRT 423
+ +L+ M++ + PDVVT LI LCK+R++DEA EVF M + I+
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKA 368
Query: 424 FHAFFRIL--------RVEEEVFELLDKMR-ELGCYPTIETYIMLIRKFCRWRKLDEVFK 474
F L R+ +E ELL +M+ E C P TY LI +CR KL+ +
Sbjct: 369 DSIHFNTLIDGLCKVGRL-KEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKE 427
Query: 475 IWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKG 518
+ + M+ED + + + ++ G+ + + A ++++M+++G
Sbjct: 428 VVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG 471
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 136/285 (47%), Gaps = 14/285 (4%)
Query: 154 EAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQT 213
+ A FF W G+ H+ M +L K F W+ + + G ++VT +
Sbjct: 108 QKALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTAS 167
Query: 214 LLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNK 273
+ +++ V A+ TFY K + + + + +++ALCR N + A LL +
Sbjct: 168 ITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQ 227
Query: 274 NV---FPLEIKSFNIILNGWC--NLIVSAR--------EAERVWHEMSKRGIQHDVVSYA 320
+P + ++ I+++ +C + R EA R++ EM RG DVV+Y
Sbjct: 228 LPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYN 287
Query: 321 SIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEK- 379
++ K++++ + +LF+ MK K P++ YN+ I + ++ A+ +++TM+K
Sbjct: 288 CLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKL 347
Query: 380 NNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTF 424
+ P TY LI L + R+ EA+++ +M++ + P T+
Sbjct: 348 GHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTY 392
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 122/282 (43%), Gaps = 35/282 (12%)
Query: 293 LIVSAREAERVW---HEMSKRGIQHDVVSYASI---MSCYSKSSKLYKVFQLFDQMKNKK 346
L+ + + +W ++S+R +VV+ ASI M C + + + F +MK
Sbjct: 136 LLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYH 195
Query: 347 ITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNV--TPDVVTYNSLIKPLCK------ 398
PD YN +I+AL + K+A LL M+ PD TY LI C+
Sbjct: 196 CKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTG 255
Query: 399 -----NRKIDEAKEVFNDMMKRNITPTIRTFHAFF-------RILRVEEEVFELLDKMRE 446
R++ EA +F +M+ R P + T++ RI R EL + M+
Sbjct: 256 CRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRA----LELFEDMKT 311
Query: 447 LGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVS-HDRSSYIVLIHGLFLNGKVK 505
GC P TY IR + +++ ++ M++ G S+Y LIH L +
Sbjct: 312 KGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAA 371
Query: 506 EAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDLE 547
EA D +EM G +P T +++ LS +EG + L+
Sbjct: 372 EARDLVVEMVEAGLVPREYTYKLVCDALS----SEGLASTLD 409
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 147/379 (38%), Gaps = 75/379 (19%)
Query: 154 EAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGG-GTGPSLVTPQ 212
A F WA PG+ HS Y ++ L R+FDT + L++ M G P
Sbjct: 57 SGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPD---DA 113
Query: 213 TLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCN 272
+ +IR + R + R I+ +FG + + F +L L K D F
Sbjct: 114 IFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVL--VKEDIDIAREFFTR 171
Query: 273 KNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKL 332
K M GI DV +Y +M S ++++
Sbjct: 172 K---------------------------------MMASGIHGDVYTYGILMKGLSLTNRI 198
Query: 333 YKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSL 392
F+L MK + P+ VYN ++HAL K V A +L+ M++ P+ VT+N L
Sbjct: 199 GDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNIL 254
Query: 393 IKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPT 452
I C +K+ ++ LL+K LG P
Sbjct: 255 ISAYCNEQKLIQS--------------------------------MVLLEKCFSLGFVPD 282
Query: 453 IETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYI 512
+ T ++ C ++ E ++ + G D + L+ G GK++ A ++I
Sbjct: 283 VVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFI 342
Query: 513 EMQRKGFLPEPKTEQMLQA 531
EM+RKG+LP +T +L A
Sbjct: 343 EMERKGYLPNVETYNLLIA 361
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/453 (20%), Positives = 166/453 (36%), Gaps = 68/453 (15%)
Query: 149 IRNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSL 208
++ D + A FF G V Y ++ L + + L+++M+ G P+
Sbjct: 158 VKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNA 217
Query: 209 VTPQTLL----------------------------IMIRKYCAVRDVGRAINTFYAFKRF 240
V TLL I+I YC + + +++
Sbjct: 218 VVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSL 277
Query: 241 GFQVGIDEFQGLLSALCRYKNVQDA-EHLLFCNKNVFPLEIKSFNIILNGWCNLIVSARE 299
GF + ++ LC V +A E L +++ + N ++ G+C L R
Sbjct: 278 GFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCAL-GKMRV 336
Query: 300 AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIH 359
A+R + EM ++G +V +Y +++ Y L F+ MK I + +N +I
Sbjct: 337 AQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIR 396
Query: 360 ALAKGRLVKEAVNLLQTMEKNNVT--PDVVTYNSLIK----------------------- 394
L+ G + + +L+ M+ ++ + YN +I
Sbjct: 397 GLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFP 456
Query: 395 ----------PLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELL 441
LC+ +D+ K ++ M+ P+I H EE EL+
Sbjct: 457 RAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELI 516
Query: 442 DKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLN 501
+ M G P T+ +I FC+ K+ K M E G D SY L+ L +
Sbjct: 517 NDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVK 576
Query: 502 GKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLS 534
G +++A + M K +P+P L LS
Sbjct: 577 GDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLS 609
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 153/390 (39%), Gaps = 50/390 (12%)
Query: 189 FDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDE 248
FD W L+ M+ G P +V + I K C + A + + K FG
Sbjct: 287 FDKGWELLMGMKHYGIRPDIVA---FTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVS 343
Query: 249 FQGLLSALCRYKNVQDAEHLLFCNK---NVFPLEIKSFNIILNGWCNLIVSAREAERVWH 305
++ C+ ++A L+ + N+F NI G A ++
Sbjct: 344 VSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTG------DMLRASTIFQ 397
Query: 306 EMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQ---------------------------- 337
E+ + G+ D V Y +++ Y + K FQ
Sbjct: 398 EIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFG 457
Query: 338 -------LFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYN 390
+F MK + + D YN ++H K + + L+ M ++PDV TYN
Sbjct: 458 SISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYN 517
Query: 391 SLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFH---AFFRILRVEEEVFELLDKMREL 447
LI + IDEA E+ +++++R P+ F F +E F L M +L
Sbjct: 518 ILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADL 577
Query: 448 GCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEA 507
P + T L+ +C+ +++++ ++N + + G+ D Y LIHG G +++A
Sbjct: 578 RMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKA 637
Query: 508 HDYYIEMQRKGFLPEPKTEQMLQAWLSGRQ 537
+ M ++G LP T L L G++
Sbjct: 638 CELIGLMVQRGMLPNESTHHALVLGLEGKR 667
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 171/430 (39%), Gaps = 66/430 (15%)
Query: 152 DWEAAFTFFLWAGKQPGYAHSVREYHSMISIL--GKM--RKFDTAWNLIEVMRGGGTGPS 207
D FF W+ G HS R MI IL G M R D L++ G
Sbjct: 125 DASIVLYFFRWSELWIGVEHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGEERSLC 184
Query: 208 LVTPQTL-----------LIMIRKYCAVRD--VGRAINTFYAFKRFGFQVGIDEFQGLLS 254
LV + I C +R+ V A+ Y +FG LL
Sbjct: 185 LVMKDLFETRIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLK 244
Query: 255 ALCRYKNVQDA----EHLL-----------------FCNKNVFPL--------------- 278
+ R ++ A EH+L +C+ F
Sbjct: 245 EILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRP 304
Query: 279 EIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQL 338
+I +F + ++ C +EA V ++ GI D VS +S++ + K K + +L
Sbjct: 305 DIVAFTVFIDKLCKAGF-LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL 363
Query: 339 FDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCK 398
++ P+ VY++ + + + A + Q + + + PD V Y ++I C
Sbjct: 364 IHSF---RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCN 420
Query: 399 NRKIDEAKEVFNDMMKRNITPTIRTFHAF------FRILRVEEEVFELLDKMRELGCYPT 452
+ D+A + F ++K P++ T F + E VF M+ G
Sbjct: 421 LGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFR---NMKTEGLKLD 477
Query: 453 IETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYI 512
+ TY L+ + + +L++VF++ + MR G+S D ++Y +LIH + + G + EA++
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIIS 537
Query: 513 EMQRKGFLPE 522
E+ R+GF+P
Sbjct: 538 ELIRRGFVPS 547
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 153/390 (39%), Gaps = 50/390 (12%)
Query: 189 FDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDE 248
FD W L+ M+ G P +V + I K C + A + + K FG
Sbjct: 287 FDKGWELLMGMKHYGIRPDIVA---FTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVS 343
Query: 249 FQGLLSALCRYKNVQDAEHLLFCNK---NVFPLEIKSFNIILNGWCNLIVSAREAERVWH 305
++ C+ ++A L+ + N+F NI G A ++
Sbjct: 344 VSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTG------DMLRASTIFQ 397
Query: 306 EMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQ---------------------------- 337
E+ + G+ D V Y +++ Y + K FQ
Sbjct: 398 EIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFG 457
Query: 338 -------LFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYN 390
+F MK + + D YN ++H K + + L+ M ++PDV TYN
Sbjct: 458 SISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYN 517
Query: 391 SLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFH---AFFRILRVEEEVFELLDKMREL 447
LI + IDEA E+ +++++R P+ F F +E F L M +L
Sbjct: 518 ILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADL 577
Query: 448 GCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEA 507
P + T L+ +C+ +++++ ++N + + G+ D Y LIHG G +++A
Sbjct: 578 RMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKA 637
Query: 508 HDYYIEMQRKGFLPEPKTEQMLQAWLSGRQ 537
+ M ++G LP T L L G++
Sbjct: 638 CELIGLMVQRGMLPNESTHHALVLGLEGKR 667
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 171/430 (39%), Gaps = 66/430 (15%)
Query: 152 DWEAAFTFFLWAGKQPGYAHSVREYHSMISIL--GKM--RKFDTAWNLIEVMRGGGTGPS 207
D FF W+ G HS R MI IL G M R D L++ G
Sbjct: 125 DASIVLYFFRWSELWIGVEHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGEERSLC 184
Query: 208 LVTPQTL-----------LIMIRKYCAVRD--VGRAINTFYAFKRFGFQVGIDEFQGLLS 254
LV + I C +R+ V A+ Y +FG LL
Sbjct: 185 LVMKDLFETRIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLK 244
Query: 255 ALCRYKNVQDA----EHLL-----------------FCNKNVFPL--------------- 278
+ R ++ A EH+L +C+ F
Sbjct: 245 EILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRP 304
Query: 279 EIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQL 338
+I +F + ++ C +EA V ++ GI D VS +S++ + K K + +L
Sbjct: 305 DIVAFTVFIDKLCKAGF-LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL 363
Query: 339 FDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCK 398
++ P+ VY++ + + + A + Q + + + PD V Y ++I C
Sbjct: 364 IHSF---RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCN 420
Query: 399 NRKIDEAKEVFNDMMKRNITPTIRTFHAF------FRILRVEEEVFELLDKMRELGCYPT 452
+ D+A + F ++K P++ T F + E VF M+ G
Sbjct: 421 LGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFR---NMKTEGLKLD 477
Query: 453 IETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYI 512
+ TY L+ + + +L++VF++ + MR G+S D ++Y +LIH + + G + EA++
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIIS 537
Query: 513 EMQRKGFLPE 522
E+ R+GF+P
Sbjct: 538 ELIRRGFVPS 547
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 155/377 (41%), Gaps = 44/377 (11%)
Query: 206 PSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDA 265
P+L+T TLLI + +Y + + A F + G + + F L++ C ++DA
Sbjct: 164 PNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDA 223
Query: 266 EHLLFCNKNVFPLEIKSFNIILNGWCNLIVSA---REAERVWHEMSKRGIQHDVVSYASI 322
+L + V ++ N+ N + + + + +M K G+ + V+Y ++
Sbjct: 224 LGML--ERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNL 281
Query: 323 MSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNV 382
+ Y K L + FQ+ + MK + PD YN +I+ L ++E + L+ M+ +
Sbjct: 282 VYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKL 341
Query: 383 TPDVVTYNSLI-----------------------------------KPLCKNRKIDEAKE 407
PDVVTYN+LI K LCK K +
Sbjct: 342 QPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTR 401
Query: 408 VFNDMMK-RNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIML---IRKF 463
+++ +P I T+H + ++ L+ MRE+G I L +
Sbjct: 402 KVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDAL 461
Query: 464 CRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEP 523
C+ RKLDE + N + G D +Y LI G F KV++A + + EM++ P
Sbjct: 462 CKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTV 521
Query: 524 KTEQMLQAWLSGRQGTE 540
T L L TE
Sbjct: 522 STFNSLIGGLCHHGKTE 538
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 176/404 (43%), Gaps = 15/404 (3%)
Query: 160 FLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIR 219
L K+ G + Y++++ K+ A+ ++E+M+ P L T I+I
Sbjct: 262 LLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYN---ILIN 318
Query: 220 KYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFP 277
C + + A K Q + + L+ +A L+ N V
Sbjct: 319 GLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKA 378
Query: 278 LEIKSFNIILNGWCNLIVSAREA--ERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKV 335
++ + NI L C REA +V + G D+V+Y +++ Y K L
Sbjct: 379 NQV-THNISLKWLCK--EEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGA 435
Query: 336 FQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKP 395
++ +M K I + N ++ AL K R + EA NLL + K D VTY +LI
Sbjct: 436 LEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMG 495
Query: 396 LCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL---RVEEEVFELLDKMRELGCYPT 452
+ K+++A E++++M K ITPT+ TF++ L E E D++ E G P
Sbjct: 496 FFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPD 555
Query: 453 IETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYI 512
T+ +I +C+ ++++ F+ +N + D + +L++GL G ++A +++
Sbjct: 556 DSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFN 615
Query: 513 EMQRKGFLPEPKTEQMLQAWLSGRQGTEGQ--VTDLEHNQLEDD 554
+ + + M+ A+ ++ E ++++E LE D
Sbjct: 616 TLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPD 659
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 139/316 (43%), Gaps = 42/316 (13%)
Query: 197 EVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSAL 256
E++ G P +VT TL I+ Y V D+ A+ + G ++ +L AL
Sbjct: 405 ELVDMHGFSPDIVTYHTL---IKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDAL 461
Query: 257 CRYKNVQDAEHLLFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDV 316
C+ + + +A +LL + KRG D
Sbjct: 462 CKERKLDEAHNLL-----------------------------------NSAHKRGFIVDE 486
Query: 317 VSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQT 376
V+Y +++ + + K+ K +++D+MK KITP +N++I L + A+
Sbjct: 487 VTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDE 546
Query: 377 MEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE-- 434
+ ++ + PD T+NS+I CK ++++A E +N+ +K + P T + L E
Sbjct: 547 LAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606
Query: 435 -EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIV 493
E+ + + E T+ TY +I FC+ +KL E + + + M E G+ DR +Y
Sbjct: 607 TEKALNFFNTLIEEREVDTV-TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNS 665
Query: 494 LIHGLFLNGKVKEAHD 509
I L +GK+ E +
Sbjct: 666 FISLLMEDGKLSETDE 681
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 136/281 (48%), Gaps = 11/281 (3%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G++ + YH++I K+ A ++ M G + +T T+L + C R +
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDAL---CKERKL 467
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNV-FPLEIKSFNII 286
A N + + GF V + L+ R + V+ A + K V + +FN +
Sbjct: 468 DEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSL 527
Query: 287 LNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKK 346
+ G C+ + E+ + E+++ G+ D ++ SI+ Y K ++ K F+ +++
Sbjct: 528 IGGLCHHGKTELAMEK-FDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHS 586
Query: 347 ITPDRKVYNAVIHALAKGRLVKEAVNLLQTM-EKNNVTPDVVTYNSLIKPLCKNRKIDEA 405
PD N +++ L K + ++A+N T+ E+ V D VTYN++I CK++K+ EA
Sbjct: 587 FKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV--DTVTYNTMISAFCKDKKLKEA 644
Query: 406 KEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDK 443
++ ++M ++ + P T+++F +L + E ELL K
Sbjct: 645 YDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 97/214 (45%), Gaps = 7/214 (3%)
Query: 323 MSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAK---GRLVKEAVNLLQTMEK 379
+S Y K + Q+F +M K+ P+ N ++ L + + A + M K
Sbjct: 138 LSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVK 197
Query: 380 NNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKR-NITPTIRTFHAFFRILRVE---E 435
V+ +V T+N L+ C K+++A + M+ + P T++ + + +
Sbjct: 198 IGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLS 257
Query: 436 EVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLI 495
++ ELL M++ G P TY L+ +C+ L E F+I +M++ V D +Y +LI
Sbjct: 258 DLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILI 317
Query: 496 HGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
+GL G ++E + M+ P+ T L
Sbjct: 318 NGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTL 351
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 101/203 (49%), Gaps = 11/203 (5%)
Query: 349 PDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCK---NRKIDEA 405
P + +++ + A A+ + Q M + + P+++T N+L+ L + + I A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 406 KEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKM-RELGCYPTIETYIMLIR 461
+EVF+DM+K ++ ++TF+ +E E+ +L++M E P TY +++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 462 KFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
+ +L ++ ++ M+++G+ +R +Y L++G G +KEA M++ LP
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 522 EPKTEQMLQAWL----SGRQGTE 540
+ T +L L S R+G E
Sbjct: 309 DLCTYNILINGLCNAGSMREGLE 331
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 180/398 (45%), Gaps = 52/398 (13%)
Query: 153 WEAAFTFFLWAGKQPGYAHSVREYHSMISI----LGKMRKFDTAWNLIEVMRGGGTGPSL 208
WE A F W + +++ H +I I LG+ ++ A L++
Sbjct: 152 WERAVFLFEWLVLSSN-SGALKLDHQVIEIFVRILGRESQYSVAAKLLDK---------- 200
Query: 209 VTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFG-FQVGIDEFQGLLSALCRYKNVQDAEH 267
+ Q L+ +R Y + +A+ R G ++ ID F+ R K + +
Sbjct: 201 IPLQEYLLDVRAYTTI---------LHAYSRTGKYEKAIDLFE-------RMKEMGPSPT 244
Query: 268 LLFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYS 327
L+ ++N+IL+ + + S R+ V EM +G++ D + ++++S +
Sbjct: 245 LV------------TYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACA 292
Query: 328 KSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVV 387
+ L + + F ++K+ P YNA++ K + EA+++L+ ME+N+ D V
Sbjct: 293 REGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSV 352
Query: 388 TYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTF----HAFFRILRVEEEVFELLDK 443
TYN L+ + EA V M K+ + P T+ A+ + + E+E +L
Sbjct: 353 TYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGK-EDEALKLFYS 411
Query: 444 MRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGK 503
M+E GC P TY ++ + + +E+ K+ M+ +G S +R+++ ++ G
Sbjct: 412 MKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGM 471
Query: 504 VKEAHDYYIEMQRKGFLPEPKT-EQMLQAWLSGRQGTE 540
K + + EM+ GF P+ T ++ A+ GR G+E
Sbjct: 472 DKFVNRVFREMKSCGFEPDRDTFNTLISAY--GRCGSE 507
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 167/381 (43%), Gaps = 22/381 (5%)
Query: 160 FLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIR 219
++ K+ G + Y++++S+LGK + + ++ M+ G P+ T T+L +
Sbjct: 408 LFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLAL-- 465
Query: 220 KYCAVRDVGRAIN-TFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF-CNKNVFP 277
C + + + +N F K GF+ D F L+SA R + DA + + F
Sbjct: 466 --CGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFN 523
Query: 278 LEIKSFNIILNG------WCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSK 331
+ ++N +LN W R E V +M +G + SY+ ++ CY+K
Sbjct: 524 ACVTTYNALLNALARKGDW-------RSGENVISDMKSKGFKPTETSYSLMLQCYAKGGN 576
Query: 332 LYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNS 391
+ ++ +++K +I P + ++ A K R + + +K+ PD+V +NS
Sbjct: 577 YLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNS 636
Query: 392 LIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVF---ELLDKMRELG 448
++ +N D+A+ + + + ++P + T+++ + E + E+L + +
Sbjct: 637 MLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQ 696
Query: 449 CYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAH 508
P + +Y +I+ FCR + E ++ + M E G+ +Y + G G E
Sbjct: 697 LKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIE 756
Query: 509 DYYIEMQRKGFLPEPKTEQML 529
D M + P T +M+
Sbjct: 757 DVIECMAKNDCRPNELTFKMV 777
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 150/357 (42%), Gaps = 46/357 (12%)
Query: 169 YAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVG 228
Y VR Y +++ + K++ A +L E M+ G P+LVT +L + K R
Sbjct: 206 YLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKM--GRSWR 263
Query: 229 RAINTFYAFKRFGFQVGIDEF--QGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNII 286
+ + + G + DEF +LSA R E LL
Sbjct: 264 KILGVLDEMRSKGLK--FDEFTCSTVLSACAR-------EGLL----------------- 297
Query: 287 LNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKK 346
REA+ + E+ G + V+Y +++ + K+ + + +M+
Sbjct: 298 -----------REAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENS 346
Query: 347 ITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAK 406
D YN ++ A + KEA +++ M K V P+ +TY ++I K K DEA
Sbjct: 347 CPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEAL 406
Query: 407 EVFNDMMKRNITPTIRTFHAFFRILRVEE---EVFELLDKMRELGCYPTIETYIMLIRKF 463
++F M + P T++A +L + E+ ++L M+ GC P T+ ++
Sbjct: 407 KLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-AL 465
Query: 464 CRWRKLDE-VFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGF 519
C + +D+ V +++ M+ G DR ++ LI G +A Y EM R GF
Sbjct: 466 CGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGF 522
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 148/361 (40%), Gaps = 52/361 (14%)
Query: 165 KQPGYAHSVREYHSMISILGKM-RKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCA 223
K+ G + ++ Y+ ++ + GKM R + +++ MR G T T+L CA
Sbjct: 237 KEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVL----SACA 292
Query: 224 VRDVGRAINTFYA-FKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL-FCNKNVFPLEIK 281
+ R F+A K G++ G + LL + +A +L +N P +
Sbjct: 293 REGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSV 352
Query: 282 SFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQ 341
++N ++ + S +EA V M+K+G+ + ++Y +++ Y K+ K + +LF
Sbjct: 353 TYNELVAAYVRAGFS-KEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYS 411
Query: 342 MKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTP----------------- 384
MK P+ YNAV+ L K E + +L M+ N +P
Sbjct: 412 MKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGM 471
Query: 385 ------------------DVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHA 426
D T+N+LI + +A +++ +M + + T++A
Sbjct: 472 DKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNA 531
Query: 427 FFRIL------RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMR 480
L R E V + M+ G PT +Y ++++ + + + +I N ++
Sbjct: 532 LLNALARKGDWRSGENV---ISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIK 588
Query: 481 E 481
E
Sbjct: 589 E 589
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 107/247 (43%), Gaps = 15/247 (6%)
Query: 165 KQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAV 224
K G+ + Y M+ K + + ++ G PS + +TLL+ K A+
Sbjct: 553 KSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRAL 612
Query: 225 RDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL-FCNKNVFPLEIKSF 283
RA F FK+ G++ + F +LS R AE +L ++ ++ ++
Sbjct: 613 AGSERA---FTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTY 669
Query: 284 NIILN-----GWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQL 338
N +++ G C +AE + + K ++ D+VSY +++ + + + + ++
Sbjct: 670 NSLMDMYVRRGEC------WKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRM 723
Query: 339 FDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCK 398
+M + I P YN + + E ++++ M KN+ P+ +T+ ++ C+
Sbjct: 724 LSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCR 783
Query: 399 NRKIDEA 405
K EA
Sbjct: 784 AGKYSEA 790
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 162/356 (45%), Gaps = 14/356 (3%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y+++I+ K R F +++VM+ G + VT L+ + K + D A F
Sbjct: 262 YNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSD---AEKLFD 318
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF---CNKNVFPLEIKSFNIILNGWCN 292
+ G + + + L+S CR N++ A LLF K + P ++ +++G C
Sbjct: 319 EMRERGIESDVHVYTSLISWNCRKGNMKRA-FLLFDELTEKGLSPSSY-TYGALIDGVCK 376
Query: 293 LIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRK 352
+ AE + +EM +G+ V + +++ Y + + + ++D M+ K D
Sbjct: 377 -VGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVF 435
Query: 353 VYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDM 412
N + + + EA L M + V V+Y +LI CK ++EAK +F +M
Sbjct: 436 TCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEM 495
Query: 413 MKRNITPTIRTF----HAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRK 468
+ + P T+ +A+ + +++E +L M G P TY LI C
Sbjct: 496 SSKGVQPNAITYNVMIYAYCKQGKIKE-ARKLRANMEANGMDPDSYTYTSLIHGECIADN 554
Query: 469 LDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPK 524
+DE ++++ M G+ + +Y V+I GL GK EA Y EM+RKG+ + K
Sbjct: 555 VDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNK 610
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 114/230 (49%), Gaps = 3/230 (1%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
+AE+++ EM +RGI+ DV Y S++S + + + F LFD++ K ++P Y A+I
Sbjct: 312 DAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALI 371
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
+ K + A L+ M+ V V +N+LI C+ +DEA +++ M ++
Sbjct: 372 DGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQ 431
Query: 419 P---TIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKI 475
T T + F L+ +E + L +M E G + +Y LI +C+ ++E ++
Sbjct: 432 ADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRL 491
Query: 476 WNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT 525
+ M GV + +Y V+I+ GK+KEA M+ G P+ T
Sbjct: 492 FVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYT 541
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 136/335 (40%), Gaps = 37/335 (11%)
Query: 165 KQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAV 224
++ G V Y S+IS + A+ L + + G PS T L I C V
Sbjct: 321 RERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGAL---IDGVCKV 377
Query: 225 RDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL-FCNKNVFPLEIKSF 283
++G A + G + F L+ CR V +A + + F ++ +
Sbjct: 378 GEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTC 437
Query: 284 NIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMK 343
N I + + N + EA++ M + G++ VSY +++ Y K + + +LF +M
Sbjct: 438 NTIASCF-NRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMS 496
Query: 344 NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKID 403
+K + P+ YN +I+A K +KEA L ME N + PD TY SLI C +D
Sbjct: 497 SKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVD 556
Query: 404 EAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKF 463
EA +F++M + G TY ++I
Sbjct: 557 EAMRLFSEMGLK--------------------------------GLDQNSVTYTVMISGL 584
Query: 464 CRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGL 498
+ K DE F +++ M+ G + D Y LI +
Sbjct: 585 SKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 3/170 (1%)
Query: 366 LVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFH 425
+ +E + + M K ++ D + + K R+ID E+F M+ + T+ +
Sbjct: 169 MFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLT 228
Query: 426 AFFRILRVEEEVFELLDKMREL---GCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMRED 482
L EV + ++E G P TY +I + + R V + +M++D
Sbjct: 229 IVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKD 288
Query: 483 GVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAW 532
GV +++ +Y +L+ NGK+ +A + EM+ +G + L +W
Sbjct: 289 GVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISW 338
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 119/235 (50%), Gaps = 3/235 (1%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
E +R +M G+ V SY +++ C K+ ++ +M+++ I+P+ +N +
Sbjct: 408 EGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFL 467
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
+ VK+ +L+ + + PDV+T++ +I LC+ ++I +A + F +M++ I
Sbjct: 468 SGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIE 527
Query: 419 PTIRTFHAFFRILRVEEEV---FELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKI 475
P T++ R + +L KM+E G P + Y I+ FC+ RK+ + ++
Sbjct: 528 PNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEEL 587
Query: 476 WNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQ 530
M G+ D +Y LI L +G+ EA + + ++R G +P+ T+++++
Sbjct: 588 LKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLVE 642
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 171/407 (42%), Gaps = 42/407 (10%)
Query: 151 NDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVT 210
ND A +F G +P S R Y+++I L K D A+ + MR G P T
Sbjct: 165 NDVFAQISFL---GMKP----STRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFT 217
Query: 211 PQTLLIMIRKYCAVRDVGRAI----------NTF-YAFKRFGFQVG--IDEFQGLLSAL- 256
L+ + K V + R + N F Y GF + +DE L +
Sbjct: 218 YNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMR 277
Query: 257 CRYKNVQDAE-----HLLF-CNKNVFPLEI------KSFNIILNGWCNLIVS------AR 298
R N +A H +F C E+ K N+ G+ ++ A+
Sbjct: 278 VRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAK 337
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
E + ++ +RG D ++ + MSC K L + ++FD ++ + P Y ++
Sbjct: 338 ETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLV 397
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
AL + E L+ M + + V +YN++I LCK R+I+ A +M R I+
Sbjct: 398 QALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGIS 457
Query: 419 PTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKI 475
P + TF+ F V ++V +L+K+ G P + T+ ++I CR +++ + F
Sbjct: 458 PNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDC 517
Query: 476 WNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
+ M E G+ + +Y +LI G + + +M+ G P+
Sbjct: 518 FKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPD 564
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 111/230 (48%), Gaps = 14/230 (6%)
Query: 234 FYAFKRFGFQVGID-------EFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFN 284
F R+ Q+G+D + ++ LC+ + +++A L ++ + P + +FN
Sbjct: 406 FSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISP-NLVTFN 464
Query: 285 IILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKN 344
L+G+ ++ ++ V ++ G + DV++++ I++C ++ ++ F F +M
Sbjct: 465 TFLSGY-SVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLE 523
Query: 345 KKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDE 404
I P+ YN +I + +V L M++N ++PD+ YN+ I+ CK RK+ +
Sbjct: 524 WGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKK 583
Query: 405 AKEVFNDMMKRNITPTIRTFHAFFRILRV---EEEVFELLDKMRELGCYP 451
A+E+ M++ + P T+ + L E E E+ + GC P
Sbjct: 584 AEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVP 633
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 113/274 (41%), Gaps = 39/274 (14%)
Query: 285 IILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKN 344
+++ W L + A+ V+ ++S G++ Y +++ KS+ L + F QM++
Sbjct: 150 VLIGSWGRLGL-AKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRS 208
Query: 345 KKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDE 404
PDR YN +IH + K +V EA+ L++ ME+ P+V TY LI ++DE
Sbjct: 209 DGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDE 268
Query: 405 AKEVFNDMMKRNITP---TIRTF-HAFFRIL----------------------------- 431
A + M R + P TIRTF H FR L
Sbjct: 269 ALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLY 328
Query: 432 -----RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSH 486
+ +E + L K+ E G P T+ + + L E +I++ GV
Sbjct: 329 CLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKP 388
Query: 487 DRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFL 520
+ Y+VL+ L + E Y +M G L
Sbjct: 389 GFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLL 422
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/424 (18%), Positives = 170/424 (40%), Gaps = 64/424 (15%)
Query: 156 AFTFFLWAGK-QPGYAHSVREYHSMISILGK--MRK--FDTAWNLIEVMRGGGTGPSLVT 210
+ F+LW P YA S+ S+LG RK + L++ +R G ++
Sbjct: 92 SLRFYLWVSNFDPVYAKD----QSLKSVLGNALFRKGPLLLSMELLKEIRDSGY---RIS 144
Query: 211 PQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF 270
+ + ++I + + + F G + + ++ AL + N D +L F
Sbjct: 145 DELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVK-SNSLDLAYLKF 203
Query: 271 -------CNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIM 323
C + F ++NI+++G C V EA R+ +M + G + +V +Y ++
Sbjct: 204 QQMRSDGCKPDRF-----TYNILIHGVCKKGV-VDEAIRLVKQMEQEGNRPNVFTYTILI 257
Query: 324 SCYSKSSKLYKVFQLFDQMKNKKITPD--------------------------------- 350
+ + ++ + + + M+ +K+ P+
Sbjct: 258 DGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSN 317
Query: 351 --RKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEV 408
R Y+AV++ L+ + KE L+ + + PD T+N+ + L K + E +
Sbjct: 318 LQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRI 377
Query: 409 FNDMMKRNITPTIRTFHAFFRILRVEEEVFE---LLDKMRELGCYPTIETYIMLIRKFCR 465
F+ + R + P + + L + E L +M G ++ +Y +I C+
Sbjct: 378 FDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCK 437
Query: 466 WRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT 525
R+++ M++ G+S + ++ + G + G VK+ H ++ GF P+ T
Sbjct: 438 ARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVIT 497
Query: 526 EQML 529
++
Sbjct: 498 FSLI 501
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 167/384 (43%), Gaps = 52/384 (13%)
Query: 155 AAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTL 214
A TFF Q G V Y +I+ L + K A + M G P L
Sbjct: 133 AVQTFFCMV--QRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAAL 190
Query: 215 LIMIRKYCAVRDVGRAINTFYA-FKRFGFQVGIDEFQGLLSALCRYKNVQDAEHL-LFCN 272
++ + C R V A K ++ + L+S C+ ++ AE L + +
Sbjct: 191 VVGL---CHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMS 247
Query: 273 KNVFPLEIKSFNIILNGWC--NLIVSAREAERVWHEMSKRGIQ----------------- 313
K ++ ++N++LN + N++ + AE V EM + GIQ
Sbjct: 248 KIGCEPDLVTYNVLLNYYYDNNML---KRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVS 304
Query: 314 ------------------HDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYN 355
DVVSY++++ + ++S K ++LF++M+ K + + Y
Sbjct: 305 HPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYT 364
Query: 356 AVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKR 415
++I A + A LL M + ++PD + Y +++ LCK+ +D+A VFNDM++
Sbjct: 365 SLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEH 424
Query: 416 NITPTIRTFHAFFRIL----RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDE 471
ITP ++++ L RV E + +L + M+ C P T+ +I R +KL
Sbjct: 425 EITPDAISYNSLISGLCRSGRVTEAI-KLFEDMKGKECCPDELTFKFIIGGLIRGKKLSA 483
Query: 472 VFKIWNMMREDGVSHDRSSYIVLI 495
+K+W+ M + G + DR LI
Sbjct: 484 AYKVWDQMMDKGFTLDRDVSDTLI 507
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 177/413 (42%), Gaps = 46/413 (11%)
Query: 162 WAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKY 221
W K G++ Y IS L K++KFD L+ M G P + L ++
Sbjct: 68 WDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLL--- 124
Query: 222 CAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL------------ 269
C VG A+ TF+ + G + + + L++ L R V DA +
Sbjct: 125 CRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDN 184
Query: 270 -FCNKNVFPL---------------EIKS---------FNIILNGWCNLIVSAREAERVW 304
C V L EIKS +N +++G+C +AE +
Sbjct: 185 KACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCK-AGRIEKAEALK 243
Query: 305 HEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKG 364
MSK G + D+V+Y +++ Y ++ L + + +M I D YN ++ +
Sbjct: 244 SYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRV 303
Query: 365 RLVKEAVN-LLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRT 423
+ N +++ ME DVV+Y++LI+ C+ +A +F +M ++ + + T
Sbjct: 304 SHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVT 362
Query: 424 FHAFFRILRVEEE---VFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMR 480
+ + + E +LLD+M ELG P Y ++ C+ +D+ + ++N M
Sbjct: 363 YTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMI 422
Query: 481 EDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWL 533
E ++ D SY LI GL +G+V EA + +M+ K P+ T + + L
Sbjct: 423 EHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGL 475
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 4/223 (1%)
Query: 300 AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIH 359
AE ++ +M G +Y+ +S K K + L M+ PD +N +
Sbjct: 63 AEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLD 122
Query: 360 ALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITP 419
L + V AV M + PDVV+Y LI L + K+ +A E++N M++ ++P
Sbjct: 123 LLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSP 182
Query: 420 TIRTFHAFFRIL---RVEEEVFELL-DKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKI 475
+ A L R + +E++ ++++ + Y LI FC+ ++++ +
Sbjct: 183 DNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEAL 242
Query: 476 WNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKG 518
+ M + G D +Y VL++ + N +K A EM R G
Sbjct: 243 KSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSG 285
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 11/204 (5%)
Query: 317 VSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQT 376
++Y S ++ KS + Q+FD+M++ YN I L + + A +
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 377 MEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEE 436
M+ + TY+ I LCK +K D + +DM P I F+ + +L E +
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 437 V-------FELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRS 489
V F ++ + RE P + +Y +LI R K+ + +IWN M GVS D
Sbjct: 130 VGFAVQTFFCMVQRGRE----PDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNK 185
Query: 490 SYIVLIHGLFLNGKVKEAHDYYIE 513
+ L+ GL KV A++ E
Sbjct: 186 ACAALVVGLCHARKVDLAYEMVAE 209
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 10/217 (4%)
Query: 351 RKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFN 410
R Y + I L K ++ AV + M ++ YN I L + + + A+ ++
Sbjct: 9 RLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYW 68
Query: 411 DMMKRNITPTIRTFHAFFRILRVEEEVFELLDK----MRELGCYPTIETYIMLIRKFCRW 466
DM + T+ F L + + F+L+D M LG P I + + + CR
Sbjct: 69 DMKPMGFSLIPFTYSRFISGL-CKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRE 127
Query: 467 RKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTE 526
K+ + + M + G D SY +LI+GLF GKV +A + + M R G P+ K
Sbjct: 128 NKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKAC 187
Query: 527 QMLQAWLSGRQGTEGQVTDLEHNQLEDDTVEKKVKAT 563
L L + DL + + ++ +VK +
Sbjct: 188 AALVVGL-----CHARKVDLAYEMVAEEIKSARVKLS 219
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 4/183 (2%)
Query: 217 MIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKN 274
+I +C + +A F ++ G + + + L+ A R N A+ LL
Sbjct: 331 LIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELG 390
Query: 275 VFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYK 334
+ P I + IL+ C + +A V+++M + I D +SY S++S +S ++ +
Sbjct: 391 LSPDRI-FYTTILDHLCK-SGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTE 448
Query: 335 VFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIK 394
+LF+ MK K+ PD + +I L +G+ + A + M T D ++LIK
Sbjct: 449 AIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIK 508
Query: 395 PLC 397
C
Sbjct: 509 ASC 511
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 142/303 (46%), Gaps = 21/303 (6%)
Query: 249 FQGLLSALCRYKNVQDAEHLL------FCNKNVFPLEIKSFNIILNGWCNLIVSAREAER 302
F L+ ALC V A L C N F +F I++ G+C ++ + E
Sbjct: 150 FNLLIRALCDSSCVDAARELFDEMPEKGCKPNEF-----TFGILVRGYCKAGLTDKGLE- 203
Query: 303 VWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALA 362
+ + M G+ + V Y +I+S + + + ++ ++M+ + + PD +N+ I AL
Sbjct: 204 LLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALC 263
Query: 363 KGRLVKEAVNLLQTMEKNNVT----PDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
K V +A + ME + P+ +TYN ++K CK +++AK +F + + +
Sbjct: 264 KEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDL 323
Query: 419 PTIRTFHAFFRILRVEEEVFE---LLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKI 475
++++++ + + L + E +L +M + G P+I +Y +L+ C+ L + I
Sbjct: 324 ASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTI 383
Query: 476 WNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML--QAWL 533
+M+ +GV D +Y L+HG GKV A EM R LP T +L W
Sbjct: 384 VGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWK 443
Query: 534 SGR 536
GR
Sbjct: 444 MGR 446
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 161/362 (44%), Gaps = 36/362 (9%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
S++ Y+ + L + KF A +++ M G GPS+ + I++ C + + A
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYN---ILMDGLCKLGMLSDAK 381
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIILNGW- 290
KR G + LL C V A+ LL E+ N + N +
Sbjct: 382 TIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLL--------QEMMRNNCLPNAYT 433
Query: 291 CNLIVSA-------REAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMK 343
CN+++ + EAE + +M+++G D V+ I+ S +L K ++ M+
Sbjct: 434 CNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMR 493
Query: 344 NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQ-TMEKNNVTPDVVTYNSLIKPLCKNRKI 402
V + A G L + L+ ++ +NN PD++TY++L+ LCK +
Sbjct: 494 -------------VHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRF 540
Query: 403 DEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEV---FELLDKMRELGCYPTIETYIML 459
EAK +F +MM + P ++ F + ++ F +L M + GC+ ++ETY L
Sbjct: 541 AEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSL 600
Query: 460 IRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGF 519
I ++ E+ + + M+E G+S + +Y I L KV++A + EM +K
Sbjct: 601 ILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNI 660
Query: 520 LP 521
P
Sbjct: 661 AP 662
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 166/375 (44%), Gaps = 40/375 (10%)
Query: 179 MISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFK 238
++ L KM + A L+ M G G VT I++ C ++ +AI +
Sbjct: 437 LLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCN---IIVDGLCGSGELDKAIEIVKGMR 493
Query: 239 RFGFQ---------VGIDE--------------FQGLLSALCRYKNVQDAEHLL--FCNK 273
G +G+ + + LL+ LC+ +A++L +
Sbjct: 494 VHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGE 553
Query: 274 NVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLY 333
+ P + ++NI ++ +C A RV +M K+G + +Y S++ ++++
Sbjct: 554 KLQPDSV-AYNIFIHHFCKQ-GKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIF 611
Query: 334 KVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLI 393
++ L D+MK K I+P+ YN I L +G V++A NLL M + N+ P+V ++ LI
Sbjct: 612 EIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLI 671
Query: 394 KPLCKNRKIDEAKEVFNDMM-----KRNI-TPTIRTFHAFFRILRVEEEVFELLDKMREL 447
+ CK D A+EVF + K + + A ++L+ E + +LD+ EL
Sbjct: 672 EAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFEL 731
Query: 448 GCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEA 507
G + Y L+ C+ +L+ I + M + G D ++ + +I GL G KEA
Sbjct: 732 GTF----LYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEA 787
Query: 508 HDYYIEMQRKGFLPE 522
+ + +M + E
Sbjct: 788 NSFADKMMEMASVGE 802
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 177/443 (39%), Gaps = 59/443 (13%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y++++S + + D + ++E MR G P +VT + + + K V D R +
Sbjct: 220 YNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFS--- 276
Query: 236 AFKRFGFQVGIDEFQGL-----------LSALCRYKNVQDAEHLL-FCNKNVFPLEIKSF 283
+ +DE+ GL L C+ ++DA+ L +N ++S+
Sbjct: 277 -------DMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSY 329
Query: 284 NIILNGWCNLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQ 341
NI L G L+ + EAE V +M+ +GI + SY +M K L +
Sbjct: 330 NIWLQG---LVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGL 386
Query: 342 MKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRK 401
MK + PD Y ++H V A +LLQ M +NN P+ T N L+ L K +
Sbjct: 387 MKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGR 446
Query: 402 IDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEV---FELLDKMR------------- 445
I EA+E+ M ++ T + L E+ E++ MR
Sbjct: 447 ISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNS 506
Query: 446 ----------ELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLI 495
E C P + TY L+ C+ + E ++ M + + D +Y + I
Sbjct: 507 YIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFI 566
Query: 496 HGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDLEHNQLEDDT 555
H GK+ A +M++KG +T L L G + Q+ E + L D+
Sbjct: 567 HHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGL----GIKNQI--FEIHGLMDEM 620
Query: 556 VEKKVKATPSKFDKEKAFLREPE 578
EK + ++ +L E E
Sbjct: 621 KEKGISPNICTYNTAIQYLCEGE 643
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 150/370 (40%), Gaps = 47/370 (12%)
Query: 190 DTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEF 249
D L+ M G P+ V T+ + +C + + G I F
Sbjct: 199 DKGLELLNAMESFGVLPNKVIYNTI---VSSFCREGRNDDSEKMVEKMREEGLVPDIVTF 255
Query: 250 QGLLSALCRYKNVQDA----------EHLLFCNKNVFPLEIKSFNIILNGWCNLIVSARE 299
+SALC+ V DA E+L N ++N++L G+C + + +
Sbjct: 256 NSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSI-----TYNLMLKGFCKVGL-LED 309
Query: 300 AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIH 359
A+ ++ + + + SY + + K + + QM +K I P YN ++
Sbjct: 310 AKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMD 369
Query: 360 ALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITP 419
L K ++ +A ++ M++N V PD VTY L+ C K+D AK + +MM+ N P
Sbjct: 370 GLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLP 429
Query: 420 TIRT----FHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKI 475
T H+ +++ R+ E ELL KM E G T +++ C +LD+ +I
Sbjct: 430 NAYTCNILLHSLWKMGRI-SEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEI 488
Query: 476 WNMMR-----------------------EDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYI 512
MR E+ D +Y L++GL G+ EA + +
Sbjct: 489 VKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFA 548
Query: 513 EMQRKGFLPE 522
EM + P+
Sbjct: 549 EMMGEKLQPD 558
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 105/212 (49%), Gaps = 5/212 (2%)
Query: 318 SYASIMSCYSKSSKLYKVFQLFDQMKNK--KITPDRKVYNAVIHALAKGRLVKEAVNLLQ 375
S S++S ++KS+ + K F F ++++ + P +YN ++ + K R V+ L +
Sbjct: 77 SLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYK 136
Query: 376 TMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFR---ILR 432
M + P T+N LI+ LC + +D A+E+F++M ++ P TF R
Sbjct: 137 DMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAG 196
Query: 433 VEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYI 492
+ ++ ELL+ M G P Y ++ FCR + D+ K+ MRE+G+ D ++
Sbjct: 197 LTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFN 256
Query: 493 VLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPK 524
I L GKV +A + +M+ +L P+
Sbjct: 257 SRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 109/241 (45%), Gaps = 13/241 (5%)
Query: 303 VWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALA 362
++ +M GI ++ ++ SS + +LFD+M K P+ + ++
Sbjct: 134 LYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYC 193
Query: 363 KGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIR 422
K L + + LL ME V P+ V YN+++ C+ + D+++++ M + + P I
Sbjct: 194 KAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIV 253
Query: 423 TFHAFFRILRVEEEVFELLDKMR-----ELGCY-----PTIETYIMLIRKFCRWRKLDEV 472
TF++ L E +V LD R EL Y P TY ++++ FC+ L++
Sbjct: 254 TFNSRISALCKEGKV---LDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDA 310
Query: 473 FKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAW 532
++ +RE+ SY + + GL +GK EA +M KG P + +L
Sbjct: 311 KTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDG 370
Query: 533 L 533
L
Sbjct: 371 L 371
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 154/350 (44%), Gaps = 10/350 (2%)
Query: 151 NDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVT 210
NDW+ + W ++ Y SV Y+ ++ + + ++FD A L + MR P T
Sbjct: 133 NDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYT 192
Query: 211 PQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF 270
TL+ K + + G V L LC Y L
Sbjct: 193 YSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRL- 251
Query: 271 CNKNVFPLEIKSFNIILN--GWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSK 328
++ ++ ++N ++N G L REA + EM++ G+ + VSY++++S Y +
Sbjct: 252 -KRSGITPDLVAYNSMINVYGKAKLF---REARLLIKEMNEAGVLPNTVSYSTLLSVYVE 307
Query: 329 SSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVT 388
+ K + +F +MK D N +I + +VKEA L ++ K ++ P+VV+
Sbjct: 308 NHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVS 367
Query: 389 YNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL---RVEEEVFELLDKMR 445
YN++++ + EA +F M +++I + T++ +I E+ L+ +M+
Sbjct: 368 YNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQ 427
Query: 446 ELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLI 495
G P TY +I + + KLD ++ +R GV D+ Y +I
Sbjct: 428 SRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMI 477
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 171/388 (44%), Gaps = 10/388 (2%)
Query: 152 DWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTP 211
D+ A + F K+ G + Y+SMI++ GK + F A LI+ M G P+ V+
Sbjct: 240 DYSKAISIFSRL-KRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSY 298
Query: 212 QTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFC 271
TLL + Y A++ F K + + ++ + V++A+ L +
Sbjct: 299 STLLSV---YVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWS 355
Query: 272 NK--NVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKS 329
+ ++ P + S+N IL + + EA ++ M ++ I+ +VV+Y +++ Y K+
Sbjct: 356 LRKMDIEP-NVVSYNTILRVYGEAELFG-EAIHLFRLMQRKDIEQNVVTYNTMIKIYGKT 413
Query: 330 SKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTY 389
+ K L +M+++ I P+ Y+ +I K + A L Q + + V D V Y
Sbjct: 414 MEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLY 473
Query: 390 NSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGC 449
++I + + AK + +++ + P + R EE + + + E G
Sbjct: 474 QTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATW-VFRQAFESGE 532
Query: 450 YPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHD 509
I + +I + R ++ V +++ MR G D + ++++ + ++A
Sbjct: 533 VKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADT 592
Query: 510 YYIEMQRKG-FLPEPKTEQMLQAWLSGR 536
Y EMQ +G P+ QML + S +
Sbjct: 593 VYREMQEEGCVFPDEVHFQMLSLYSSKK 620
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 166/383 (43%), Gaps = 22/383 (5%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
+V Y + I K + A M+ P++VT L I YC D+ A+
Sbjct: 162 NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCL---IDGYCKAGDLEVAV 218
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNG 289
+ + +R + + + L+ C+ +Q AE + V P + + I++G
Sbjct: 219 SLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSL-VYTTIIDG 277
Query: 290 WCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITP 349
+ + A + +M +G++ D+ +Y I+S + KL + ++ + M+ + P
Sbjct: 278 FFQR-GDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVP 336
Query: 350 DRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVF 409
D ++ +++A K +K AVN+ + + PDVV +++I + KN ++ EA F
Sbjct: 337 DMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF 396
Query: 410 -----NDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFC 464
ND+M + + F + R L K+ E G P Y I C
Sbjct: 397 CIEKANDVMYTVLIDALCKEGDFIEVER-------LFSKISEAGLVPDKFMYTSWIAGLC 449
Query: 465 RWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPK 524
+ L + FK+ M ++G+ D +Y LI+GL G + EA + EM G P+
Sbjct: 450 KQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSA 509
Query: 525 T-EQMLQAWLSGRQGTEGQVTDL 546
+ +++A+ ++G +DL
Sbjct: 510 VFDLLIRAY--EKEGNMAAASDL 530
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/469 (20%), Positives = 190/469 (40%), Gaps = 75/469 (15%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIM------IRKY 221
GY ++S++S + K+ + A +++ M G P +++ +L+ IR
Sbjct: 51 GYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSA 110
Query: 222 CAVRDVGRAINTFYA----------FKRFGFQVGIDE---FQGLLSALCRYKNVQDAEHL 268
V + RA + F F F +DE + G++ C V + +
Sbjct: 111 SLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWI 170
Query: 269 -LFCNKNVFPLEIKSFN---------------IILNGWCNLIVSAREAERVWHEMSKRGI 312
FC L +KSF+ +++G+C A ++ EM + +
Sbjct: 171 DTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCK-AGDLEVAVSLYKEMRRVRM 229
Query: 313 QHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVN 372
+VV+Y +++ + K ++ + +++ +M ++ P+ VY +I + A+
Sbjct: 230 SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMK 289
Query: 373 LLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTF----HAFF 428
L M + D+ Y +I LC N K+ EA E+ DM K ++ P + F +A+F
Sbjct: 290 FLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYF 349
Query: 429 RILRVEEEV----------FE--------LLD------KMRELGCYPTIE-----TYIML 459
+ R++ V FE ++D ++ E Y IE Y +L
Sbjct: 350 KSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVL 409
Query: 460 IRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGF 519
I C+ EV ++++ + E G+ D+ Y I GL G + +A M ++G
Sbjct: 410 IDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGL 469
Query: 520 LPEPKTEQMLQAWLSGRQGTEGQVTDLEHNQLEDDTVEKKVKATPSKFD 568
L + L A+ + G + +E Q+ D+ + + + FD
Sbjct: 470 LLD------LLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFD 512
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 115/275 (41%), Gaps = 15/275 (5%)
Query: 150 RNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLV 209
R D + A F Q G + Y +IS L K A ++E M P +V
Sbjct: 281 RGDSDNAMKFLAKMLNQ-GMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMV 339
Query: 210 TPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL 269
T M+ Y + A+N ++ GF+ + ++ + + + +A +
Sbjct: 340 IFTT---MMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA-IVY 395
Query: 270 FCNKNVFPLEIKSFNIILNGWC---NLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCY 326
FC + + + ++++ C + I E ER++ ++S+ G+ D Y S ++
Sbjct: 396 FCIEKANDV---MYTVLIDALCKEGDFI----EVERLFSKISEAGLVPDKFMYTSWIAGL 448
Query: 327 SKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDV 386
K L F+L +M + + D Y +I+ LA L+ EA + M + ++PD
Sbjct: 449 CKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDS 508
Query: 387 VTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTI 421
++ LI+ K + A ++ DM +R + +
Sbjct: 509 AVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAV 543
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 142/344 (41%), Gaps = 47/344 (13%)
Query: 170 AHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGR 229
+H+ R S IS ++ +M G P VT I +R C V
Sbjct: 130 SHACRAPDSSIS---------NVHRVLNLMVNNGLEPDQVTTD---IAVRSLCETGRVDE 177
Query: 230 AINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPL--EIKSFNIIL 287
A + + LL LC+ K++ + ++ F + ++ SF I++
Sbjct: 178 AKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILI 237
Query: 288 NGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKI 347
+ CN + REA + ++ G + D Y +IM + SK + ++ +MK + +
Sbjct: 238 DNVCN-SKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGV 296
Query: 348 TPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKE 407
PD+ YN +I L+K V+EA L+TM PD TY SL+ +C+ + A
Sbjct: 297 EPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGA-- 354
Query: 408 VFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWR 467
LL++M GC P TY L+ C+ R
Sbjct: 355 ------------------------------LSLLEEMEARGCAPNDCTYNTLLHGLCKAR 384
Query: 468 KLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYY 511
+D+ +++ MM+ GV + + Y L+ L +GKV EA++ +
Sbjct: 385 LMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVF 428
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 138/300 (46%), Gaps = 15/300 (5%)
Query: 261 NVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEM-SKRGIQHDVV 317
N+ DA+ L + PL++K N +L + ++ V + H + S+ +
Sbjct: 64 NLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRS 123
Query: 318 SYASIMS--CYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQ 375
++ ++S C + S + V ++ + M N + PD+ + + +L + V EA +L++
Sbjct: 124 TFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMK 183
Query: 376 TMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKR-NITPTIRTFHAFF------ 428
+ + + PD TYN L+K LCK + + E ++M ++ P + +F
Sbjct: 184 ELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNS 243
Query: 429 RILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDR 488
+ LR E L+ K+ G P Y +++ FC K E ++ M+E+GV D+
Sbjct: 244 KNLR---EAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQ 300
Query: 489 SSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDLEH 548
+Y LI GL G+V+EA Y M G+ P+ T L + + + G ++ LE
Sbjct: 301 ITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEE 360
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 164/378 (43%), Gaps = 16/378 (4%)
Query: 155 AAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTL 214
A FF W GK+ GY H+ Y+ I + G + F +L MR G L+T T
Sbjct: 660 AVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGC---LITQDTW 716
Query: 215 LIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYK--NVQDAEHLLF-C 271
IMI +Y AI TF K G F+ L++ LC K NV++A
Sbjct: 717 AIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREM 776
Query: 272 NKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSK 331
++ F + + L C + + ++A+ + K G V+Y+ + + K
Sbjct: 777 IRSGFVPDRELVQDYLGCLCE-VGNTKDAKSCLDSLGKIGFPV-TVAYSIYIRALCRIGK 834
Query: 332 LYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNS 391
L + + ++ D+ Y +++H L + +++A++ + +M++ P V Y S
Sbjct: 835 LEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTS 894
Query: 392 LIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAF---FRILRVEEEVFELLDKMRELG 448
LI K +++++ E M + P++ T+ A + L EE + M E G
Sbjct: 895 LIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERG 954
Query: 449 CYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAH 508
P +TY I C+ K ++ K+ + M + G++ ++ + +GL GK H
Sbjct: 955 TSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGK----H 1010
Query: 509 DYY-IEMQRKGFLPEPKT 525
D I +Q+K L +T
Sbjct: 1011 DLARIALQKKSALVAQRT 1028
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 173/394 (43%), Gaps = 48/394 (12%)
Query: 156 AFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLL 215
A FF W ++ G++H V Y++M+SI G+ R D L+ M G + +T
Sbjct: 172 AMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDI---RTWT 228
Query: 216 IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCR----------YKNVQDA 265
I+I Y + +G+ + F ++ GF++ + ++ +LC YK + +
Sbjct: 229 ILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEK 288
Query: 266 ---------EHLLFC--------------NKNVFPLEIK---SFNIILNGWCNLIVSAR- 298
+ LL C + V EI +F +L +C VS +
Sbjct: 289 GITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFC---VSGKI 345
Query: 299 -EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAV 357
EA + E+ + + D + ++ +++++ ++ D MK +K+ D VY +
Sbjct: 346 KEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKL-DDSNVYGII 404
Query: 358 IHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNI 417
I + V +A+ + ++K+ P V TY +++ L K ++ ++ +FN+M++ I
Sbjct: 405 ISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGI 464
Query: 418 TP---TIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFK 474
P I A E +++ M E G PT ++Y + +++ CR + DE+ K
Sbjct: 465 EPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIK 524
Query: 475 IWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAH 508
I+N M + + +I + NG+ ++ H
Sbjct: 525 IFNQMHASKIVIRDDIFSWVISSMEKNGEKEKIH 558
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 120/258 (46%), Gaps = 9/258 (3%)
Query: 306 EMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGR 365
EM K G D+ ++ ++S Y K+ K+ K +F++M+ D YN +I +L
Sbjct: 214 EMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAG 273
Query: 366 LVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFH 425
A+ + M + +T + TY L+ + K+ K+D + + +DM++ F
Sbjct: 274 RGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFG 333
Query: 426 AFFRILRVEEEVFELLDKMRELG----CYPTIETYIMLIRKFCRWRKLDEVFKIWNMMRE 481
+ V ++ E L+ +REL C + + +L++ CR ++ + +I ++M+
Sbjct: 334 YLLKSFCVSGKIKEALELIRELKNKEMCLDA-KYFEILVKGLCRANRMVDALEIVDIMKR 392
Query: 482 DGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT-EQMLQAWLSGRQGTE 540
+ D + Y ++I G V +A + + +++ G P T +++Q +Q +
Sbjct: 393 RKLD-DSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEK 451
Query: 541 GQ--VTDLEHNQLEDDTV 556
G ++ N +E D+V
Sbjct: 452 GCNLFNEMIENGIEPDSV 469
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 96/212 (45%), Gaps = 3/212 (1%)
Query: 309 KRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVK 368
K G H V Y +++S ++ L V +L +M+ D + + +I K + +
Sbjct: 182 KDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIG 241
Query: 369 EAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFF 428
+ + + + M K+ D YN +I+ LC + D A E + +MM++ IT +RT+
Sbjct: 242 KGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLL 301
Query: 429 RILRVEEE---VFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVS 485
+ E+ V + D M + + + L++ FC K+ E ++ ++ +
Sbjct: 302 DCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMC 361
Query: 486 HDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRK 517
D + +L+ GL ++ +A + M+R+
Sbjct: 362 LDAKYFEILVKGLCRANRMVDALEIVDIMKRR 393
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%)
Query: 437 VFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIH 496
V EL+ +M + GC I T+ +LI + + +K+ + ++ MR+ G D ++Y ++I
Sbjct: 208 VDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIR 267
Query: 497 GLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
L + G+ A ++Y EM KG +T +ML
Sbjct: 268 SLCIAGRGDLALEFYKEMMEKGITFGLRTYKML 300
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 163/361 (45%), Gaps = 17/361 (4%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y +I LG+ K A+ L + +TP T +I D+ +A+N
Sbjct: 170 YSILIHALGRSEKLYEAFLL--------SQKQTLTPLTYNALIGACARNNDIEKALNLIA 221
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNV----FPLEIKSFNIILNGWC 291
++ G+Q + ++ +L R + D+ LL K + L+++ N I+ G+
Sbjct: 222 KMRQDGYQSDFVNYSLVIQSLTRSNKI-DSVMLLRLYKEIERDKLELDVQLVNDIIMGFA 280
Query: 292 NLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDR 351
+A ++ G+ + SI+S + S + + LF++++ I P
Sbjct: 281 K-SGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRT 339
Query: 352 KVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFND 411
+ YNA++ K +K+A +++ MEK V+PD TY+ LI + + A+ V +
Sbjct: 340 RAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKE 399
Query: 412 MMKRNITPTIRTFH---AFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRK 468
M ++ P F A FR ++ F++L +M+ +G P + Y ++I F ++
Sbjct: 400 MEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNC 459
Query: 469 LDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQM 528
LD ++ M +G+ DR ++ LI +G+ A + + M+R+G LP T +
Sbjct: 460 LDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNI 519
Query: 529 L 529
+
Sbjct: 520 M 520
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 156/350 (44%), Gaps = 18/350 (5%)
Query: 182 ILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINT---FYAFK 238
I+G + D + L + TG S T TL+ +I A+ D GR + F +
Sbjct: 276 IMGFAKSGDPSKALQLLGMAQATGLSAKTA-TLVSII---SALADSGRTLEAEALFEELR 331
Query: 239 RFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCNLIVS 296
+ G + + LL + ++DAE ++ + V P E +++++++ + N +
Sbjct: 332 QSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDE-HTYSLLIDAYVN---A 387
Query: 297 AR--EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVY 354
R A V EM +Q + ++ +++ + + K FQ+ +MK+ + PDR+ Y
Sbjct: 388 GRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFY 447
Query: 355 NAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMK 414
N VI K + A+ M + PD VT+N+LI CK+ + A+E+F M +
Sbjct: 448 NVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 507
Query: 415 RNITPTIRTFHAFFRILRVEE---EVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDE 471
R P T++ +E ++ LL KM+ G P + T+ L+ + + + ++
Sbjct: 508 RGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFND 567
Query: 472 VFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
+ M+ G+ + Y LI+ G ++A + + M G P
Sbjct: 568 AIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKP 617
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 104/237 (43%), Gaps = 3/237 (1%)
Query: 300 AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIH 359
A + M GI+ D V++ +++ C+ K + ++F+ M+ + P YN +I+
Sbjct: 463 AMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMIN 522
Query: 360 ALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITP 419
+ + LL M+ + P+VVT+ +L+ K+ + ++A E +M + P
Sbjct: 523 SYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 582
Query: 420 TIRTFHAFFRILR---VEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIW 476
+ ++A + E+ M G P++ LI F R+ E F +
Sbjct: 583 SSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVL 642
Query: 477 NMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWL 533
M+E+GV D +Y L+ L K ++ Y EM G P+ K ML++ L
Sbjct: 643 QYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSAL 699
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 142/324 (43%), Gaps = 47/324 (14%)
Query: 150 RNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLV 209
R +W+ F L K G + Y+ +I GK D A + M G P V
Sbjct: 422 RGEWQKTFQV-LKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRV 480
Query: 210 TPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL 269
T TL+ K+ GR I V + F+ + C L
Sbjct: 481 TWNTLIDCHCKH------GRHI------------VAEEMFEAMERRGC-----------L 511
Query: 270 FCNKNVFPLEIKSFNIILNGWCNLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCYS 327
C ++NI++N + + R + +R+ +M +GI +VV++ +++ Y
Sbjct: 512 PC--------ATTYNIMINSYGD---QERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYG 560
Query: 328 KSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVV 387
KS + + ++MK+ + P +YNA+I+A A+ L ++AVN + M + + P ++
Sbjct: 561 KSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLL 620
Query: 388 TYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFR-ILRVE--EEVFELLDKM 444
NSLI ++R+ EA V M + + P + T+ + ++RV+ ++V + ++M
Sbjct: 621 ALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEM 680
Query: 445 RELGCYPTIETYIMLIRKFCRWRK 468
GC P + ML R R+ K
Sbjct: 681 IMSGCKPDRKARSML-RSALRYMK 703
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 143/314 (45%), Gaps = 14/314 (4%)
Query: 153 WEAAFTFFLWA-GKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTP 211
W FFL++ P + H+ + M++I+G R D W L + + G LV
Sbjct: 91 WRPVHRFFLYSQTHHPDFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRG----LVND 146
Query: 212 QTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFC 271
+T I+++ + R++ + +N F+ FG+ ++ + LC+ K V++A+ +
Sbjct: 147 KTFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIK 206
Query: 272 NKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSK 331
K + ++ ++ G+C+ + EA ++W+ M G D+ + IM K ++
Sbjct: 207 LKEFIKPDEITYRTMIQGFCD-VGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQ 265
Query: 332 LYKVFQLFDQMKNKKITP-DRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYN 390
+ ++F M +K+ D Y +I L K + A + M + V D +T+
Sbjct: 266 FDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWA 325
Query: 391 SLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL---RVEEEVFELLDKMREL 447
SLI L R++ EA + + P I +H + L + E E+ KM +
Sbjct: 326 SLIYGLLVKRRVVEAYGLVEGVE----NPDISIYHGLIKGLVKIKRASEATEVFRKMIQR 381
Query: 448 GCYPTIETYIMLIR 461
GC P + TY+ML++
Sbjct: 382 GCEPIMHTYLMLLQ 395
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 104/230 (45%), Gaps = 13/230 (5%)
Query: 288 NGWCNLIVSAREAERVW---HEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKN 344
N +I ++R + W E+ KRG+ +D ++ ++ + + +L K F M
Sbjct: 116 NKMLAIIGNSRNMDLFWELAQEIGKRGLVNDK-TFRIVLKTLASARELKKCVNYFHLMNG 174
Query: 345 KKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDE 404
+ + N + L K +LV+EA + + K + PD +TY ++I+ C + E
Sbjct: 175 FGYLYNVETMNRGVETLCKEKLVEEAKFVFIKL-KEFIKPDEITYRTMIQGFCDVGDLIE 233
Query: 405 AKEVFNDMMKRNITPTIRTFHAFFRILRVEEE------VFELLDKMRELGCYPTIETYIM 458
A +++N MM I L + + VF ++ R G Y +
Sbjct: 234 AAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKR--GGDLDGGFYRV 291
Query: 459 LIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAH 508
+I C+ ++D K+++ MRE GV D ++ LI+GL + +V EA+
Sbjct: 292 MIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAY 341
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 6/209 (2%)
Query: 314 HDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNL 373
H + +++ S + ++L ++ + + D K + V+ LA R +K+ VN
Sbjct: 110 HTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRGLVND-KTFRIVLKTLASARELKKCVNY 168
Query: 374 LQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITP---TIRTFHAFFRI 430
M +V T N ++ LCK + ++EAK VF + K I P T RT F
Sbjct: 169 FHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKL-KEFIKPDEITYRTMIQGFCD 227
Query: 431 LRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKI-WNMMREDGVSHDRS 489
+ E +L + M + G IE ++ + + DE K+ + M+ + G D
Sbjct: 228 VGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGG 287
Query: 490 SYIVLIHGLFLNGKVKEAHDYYIEMQRKG 518
Y V+I L NG++ A + EM+ +G
Sbjct: 288 FYRVMIDWLCKNGRIDMARKVFDEMRERG 316
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 151/313 (48%), Gaps = 9/313 (2%)
Query: 216 IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNK 273
+MIR + V +A F+ +++ + + + L++A R + A +L+
Sbjct: 148 MMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRA 207
Query: 274 NVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLY 333
+ P ++N ++N C + REA V +M+ G+ D+V++ ++S Y +
Sbjct: 208 AIAPSR-STYNNLINA-CGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 334 KVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTM--EKNNVTPDVVTYNS 391
K F+ MK K+ PD +N +I+ L+K +A++L +M ++ PDVVT+ S
Sbjct: 266 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 325
Query: 392 LIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAF---FRILRVEEEVFELLDKMRELG 448
++ +I+ + VF M+ + P I +++A + + + +L +++ G
Sbjct: 326 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 385
Query: 449 CYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAH 508
P + +Y L+ + R R+ + +++ MMR++ + +Y LI NG + EA
Sbjct: 386 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV 445
Query: 509 DYYIEMQRKGFLP 521
+ + +M++ G P
Sbjct: 446 EIFRQMEQDGIKP 458
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 169/405 (41%), Gaps = 18/405 (4%)
Query: 170 AHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGR 229
A S Y+++I+ G + A + + M G GP LVT I++ Y + R +
Sbjct: 210 APSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHN---IVLSAYKSGRQYSK 266
Query: 230 AINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHL-LFCNKNVFPLEIKSFNIILN 288
A++ F K G +V D + C K Q ++ L LF + E + +
Sbjct: 267 ALSYFELMK--GAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 324
Query: 289 GWCNLIVSAREAER---VWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNK 345
+L E E V+ M G++ ++VSY ++M Y+ + +K
Sbjct: 325 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 384
Query: 346 KITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEA 405
I PD Y ++++ + R +A + M K P+VVTYN+LI N + EA
Sbjct: 385 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEA 444
Query: 406 KEVFNDMMKRNITP---TIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRK 462
E+F M + I P ++ T A + + V +L + G Y I
Sbjct: 445 VEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGS 504
Query: 463 FCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
+ +L++ ++ MR+ V D ++ +LI G K EA Y EM+ L
Sbjct: 505 YINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED---LSI 561
Query: 523 PKTEQMLQAWLSGRQGTEGQVTDLEH--NQLEDDTVEKKVKATPS 565
P T+++ + L +GQVT+ E NQ++ E V A S
Sbjct: 562 PLTKEVYSSVLCAYS-KQGQVTEAESIFNQMKMAGCEPDVIAYTS 605
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 102/229 (44%), Gaps = 5/229 (2%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
+A ++ EM K + D +Y ++++ + ++ + L D M I P R YN +I
Sbjct: 161 QARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLI 220
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
+A +EA+ + + M N V PD+VT+N ++ R+ +A F M +
Sbjct: 221 NACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVR 280
Query: 419 PTIRTFHAFFRILR---VEEEVFELLDKMRE--LGCYPTIETYIMLIRKFCRWRKLDEVF 473
P TF+ L + +L + MRE C P + T+ ++ + +++
Sbjct: 281 PDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCR 340
Query: 474 KIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
++ M +G+ + SY L+ ++G A ++++ G +P+
Sbjct: 341 AVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPD 389
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 136/313 (43%), Gaps = 8/313 (2%)
Query: 195 LIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLS 254
+ E M G P++V+ L+ Y G A++ K+ G + + LL+
Sbjct: 342 VFEAMVAEGLKPNIVSYNALM---GAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLN 398
Query: 255 ALCRYKNVQDA-EHLLFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQ 313
+ R + A E L K + ++N +++ + + A EA ++ +M + GI+
Sbjct: 399 SYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLA-EAVEIFRQMEQDGIK 457
Query: 314 HDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNL 373
+VVS ++++ S+S K V + +++ I + YN+ I + +++A+ L
Sbjct: 458 PNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIAL 517
Query: 374 LQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRV 433
Q+M K V D VT+ LI C+ K EA +M +I T + +
Sbjct: 518 YQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSK 577
Query: 434 EEEVFE---LLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSS 490
+ +V E + ++M+ GC P + Y ++ + K + +++ M +G+ D +
Sbjct: 578 QGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIA 637
Query: 491 YIVLIHGLFLNGK 503
L+ G+
Sbjct: 638 CSALMRAFNKGGQ 650
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 149/357 (41%), Gaps = 14/357 (3%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
+V Y+++I G A + M G P++V+ TLL + +V +
Sbjct: 424 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVL 483
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKS----FNIIL 287
+ A + G + + SA+ Y N + E + +++ ++K+ F I++
Sbjct: 484 S---AAQSRGINLNTAAYN---SAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILI 537
Query: 288 NGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKI 347
+G C + EA EM I Y+S++ YSK ++ + +F+QMK
Sbjct: 538 SGSCRM-SKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGC 596
Query: 348 TPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKE 407
PD Y +++HA +A L ME N + PD + ++L++ K +
Sbjct: 597 EPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFV 656
Query: 408 VFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCY-PTIETYI--MLIRKFC 464
+ + M ++ I T F F +E +D ++ + Y P++ + ++ F
Sbjct: 657 LMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFG 716
Query: 465 RWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
+ K++ + K++ + GV + +Y +L+ L G ++ + M G P
Sbjct: 717 KSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQP 773
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 86/185 (46%), Gaps = 4/185 (2%)
Query: 337 QLFDQMKNKKITPDRK-VYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKP 395
+F MK +K R +YN +I A+ V +A L M+K + PD TY++LI
Sbjct: 128 NVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINA 187
Query: 396 LCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPT 452
+ + A + +DM++ I P+ T++ E E+ KM + G P
Sbjct: 188 HGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPD 247
Query: 453 IETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYI 512
+ T+ +++ + R+ + + +M+ V D +++ ++I+ L G+ +A D +
Sbjct: 248 LVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFN 307
Query: 513 EMQRK 517
M+ K
Sbjct: 308 SMREK 312
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 149/353 (42%), Gaps = 15/353 (4%)
Query: 203 GTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNV 262
G P+L+ +L I C + +A R G++ + L+ LC+
Sbjct: 282 GFKPNLINFTSL---IDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWT 338
Query: 263 QDAEHLLF--CNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYA 320
+ A L + + + ++ ++ G+C R AE ++ M ++G+ +V +Y
Sbjct: 339 EKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNR-AEMLFSRMKEQGLFPNVNTYT 397
Query: 321 SIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKN 380
++++ + K+ + ++L + M ++ P+ YNA I +L K EA LL
Sbjct: 398 TLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSC 457
Query: 381 NVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRT----FHAFFRI--LRVE 434
+ D VTY LI+ CK I++A F M K +R AF R ++
Sbjct: 458 GLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 517
Query: 435 EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVL 494
E +F+L+ LG PT ETY +I +C+ +D K ++ M+ G D +Y L
Sbjct: 518 ERLFQLV---VSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSL 574
Query: 495 IHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDLE 547
I GL V EA Y M +G P T L R + + LE
Sbjct: 575 ISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLE 627
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 149/360 (41%), Gaps = 23/360 (6%)
Query: 154 EAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQT 213
E AF FL + Y +V Y SMI K K + A L M+ G P++ T T
Sbjct: 339 EKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTT 398
Query: 214 LLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNK 273
L I +C GRA GF I + + +LC+ +A LL NK
Sbjct: 399 L---INGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELL--NK 453
Query: 274 NVFPLEIK----SFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKS 329
F ++ ++ I++ C +A + M+K G + D+ +++ + +
Sbjct: 454 -AFSCGLEADGVTYTILIQEQCKQ-NDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQ 511
Query: 330 SKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTY 389
K+ + +LF + + + P ++ Y ++I K + A+ M+++ PD TY
Sbjct: 512 KKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTY 571
Query: 390 NSLIKPLCKNRKIDEAKEVFNDMMKRNITP--TIRTFHAFFRILRVEEE----VFELLDK 443
SLI LCK +DEA +++ M+ R ++P R A+ R + + E LDK
Sbjct: 572 GSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDK 631
Query: 444 MRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGK 503
I T L+RK C +K+ + + E S DR + +GK
Sbjct: 632 KL------WIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGK 685
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 108/231 (46%), Gaps = 6/231 (2%)
Query: 300 AERVWHEMSKRGIQHDVVSYA-SIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
AE V+ EMS RG+ D SY ++ C+ + K+ + + M + PD ++
Sbjct: 201 AENVFDEMSVRGVVPDSSSYKLMVIGCF-RDGKIQEADRWLTGMIQRGFIPDNATCTLIL 259
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
AL + LV A+ + M P+++ + SLI LCK I +A E+ +M++
Sbjct: 260 TALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWK 319
Query: 419 PTIRTFHAFFRILRVE---EEVFELLDKMRELGCY-PTIETYIMLIRKFCRWRKLDEVFK 474
P + T A L E+ F L K+ Y P + TY +I +C+ KL+
Sbjct: 320 PNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEM 379
Query: 475 IWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT 525
+++ M+E G+ + ++Y LI+G G A++ M +GF+P T
Sbjct: 380 LFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYT 430
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/404 (20%), Positives = 165/404 (40%), Gaps = 35/404 (8%)
Query: 156 AFTFFLWAGKQPGYAHSVREY--------------------HSMISILGKMRKFDTAWNL 195
A FF WA + H +R Y M+ ++ + + A +
Sbjct: 110 ALCFFYWAVGFEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGM 169
Query: 196 IEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSA 255
+ M+ G PS +T +L + + + A N F G ++ ++
Sbjct: 170 VMDMQNQGLTPSSITMNCVLEIAVELGLIE---YAENVFDEMSVRGVVPDSSSYKLMVIG 226
Query: 256 LCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWH--EMSKRG 311
R +Q+A+ L + P + + +IL C + R +W+ +M G
Sbjct: 227 CFRDGKIQEADRWLTGMIQRGFIP-DNATCTLILTALCENGLVNRA---IWYFRKMIDLG 282
Query: 312 IQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAV 371
+ +++++ S++ K + + F++ ++M P+ + A+I L K ++A
Sbjct: 283 FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAF 342
Query: 372 NL-LQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFR- 429
L L+ + + P+V TY S+I CK K++ A+ +F+ M ++ + P + T+
Sbjct: 343 RLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLING 402
Query: 430 --ILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHD 487
+EL++ M + G P I TY I C+ + E +++ N G+ D
Sbjct: 403 HCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEAD 462
Query: 488 RSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQA 531
+Y +LI + +A ++ M + GF + + +L A
Sbjct: 463 GVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIA 506
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 139/335 (41%), Gaps = 11/335 (3%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G+ ++ + S+I L K A+ ++E M G P++ T L I C
Sbjct: 282 GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTAL---IDGLCKRGWT 338
Query: 228 GRAINTFYAFKRFG-FQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFN 284
+A F R ++ + + ++ C+ + AE L + +FP + ++
Sbjct: 339 EKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFP-NVNTYT 397
Query: 285 IILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKN 344
++NG C R E + + M G ++ +Y + + K S+ + ++L ++ +
Sbjct: 398 TLINGHCKAGSFGRAYE-LMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFS 456
Query: 345 KKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDE 404
+ D Y +I K + +A+ M K D+ N LI C+ +K+ E
Sbjct: 457 CGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKE 516
Query: 405 AKEVFNDMMKRNITPTIRTFHAFFRILRVEEEV---FELLDKMRELGCYPTIETYIMLIR 461
++ +F ++ + PT T+ + E ++ + M+ GC P TY LI
Sbjct: 517 SERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLIS 576
Query: 462 KFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIH 496
C+ +DE K++ M + G+S + + L +
Sbjct: 577 GLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAY 611
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 6/181 (3%)
Query: 364 GRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRT 423
GRL EAV ++ M+ +TP +T N +++ + I+ A+ VF++M R + P +
Sbjct: 161 GRL-NEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSS 219
Query: 424 FH----AFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMM 479
+ FR +++E L M + G P T +++ C ++ + M
Sbjct: 220 YKLMVIGCFRDGKIQE-ADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKM 278
Query: 480 REDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGT 539
+ G + ++ LI GL G +K+A + EM R G+ P T L L R T
Sbjct: 279 IDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWT 338
Query: 540 E 540
E
Sbjct: 339 E 339
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 160/387 (41%), Gaps = 16/387 (4%)
Query: 149 IRNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGK-----------MRKFDTAWNLIE 197
IR E AF FF W +Q S + + +M+ IL + R D + I+
Sbjct: 95 IRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERSIDLGMHEID 154
Query: 198 VMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSAL- 256
+ G+ L+ + L +++ Y + + +F R GF + +L L
Sbjct: 155 DLLIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLR 214
Query: 257 -CRYKNVQDAEHLLFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHD 315
R N A + + P I +FN +L+ C +++W EM +R I+
Sbjct: 215 DSRMMNKASAVYETMIEHGIMPTVI-TFNTMLDS-CFKAGDLERVDKIWLEMKRRNIEFS 272
Query: 316 VVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQ 375
V+Y +++ +SK+ K+ + + M+ +N +I K L +A +
Sbjct: 273 EVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTD 332
Query: 376 TMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEE 435
M + P TYN I LC +ID+A+E+ + M ++ H + ++ + E
Sbjct: 333 EMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVE 392
Query: 436 EVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLI 495
L D +R +P+I TY LI C L+ ++ M + D +Y L+
Sbjct: 393 ASL-LFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLV 451
Query: 496 HGLFLNGKVKEAHDYYIEMQRKGFLPE 522
G NG + A + Y EM RKG P+
Sbjct: 452 KGFVKNGNLSMATEVYDEMLRKGIKPD 478
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 164/398 (41%), Gaps = 48/398 (12%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G+ SVR + ++ +L R + A + E M G P+++T T+L K + V
Sbjct: 198 GFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERV 257
Query: 228 GRA-------------------INTFYA-------------FKRFGFQVGIDEFQGLLSA 255
+ IN F +R GF V F L+
Sbjct: 258 DKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEG 317
Query: 256 LCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCNL--IVSAREAERVWHEMSKRG 311
C+ DA + N ++P ++NI + C+ I ARE + M+
Sbjct: 318 YCKQGLFDDAWGVTDEMLNAGIYP-TTSTYNIYICALCDFGRIDDARE---LLSSMA--- 370
Query: 312 IQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAV 371
DVVSY ++M Y K K + LFD ++ I P YN +I L + ++ A
Sbjct: 371 -APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQ 429
Query: 372 NLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPT--IRTFHAFFR 429
L + M + PDV+TY +L+K KN + A EV+++M+++ I P T A
Sbjct: 430 RLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGE 489
Query: 430 I-LRVEEEVFELLDKMRELGCY-PTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHD 487
+ L ++ F L ++M + P + Y + I C+ L + + + G+ D
Sbjct: 490 LRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPD 549
Query: 488 RSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT 525
+Y +I G NG+ K A + Y EM RK P T
Sbjct: 550 HVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVIT 587
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 171/375 (45%), Gaps = 23/375 (6%)
Query: 165 KQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAV 224
++ G+A + ++ +I K FD AW + + M G P T T I I CA+
Sbjct: 300 RRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYP---TTSTYNIYI---CAL 353
Query: 225 RDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCN---KNVFPLEIK 281
D GR + + + L+ + +A LLF + ++ P I
Sbjct: 354 CDFGRIDDARELLSSMA-APDVVSYNTLMHGYIKMGKFVEAS-LLFDDLRAGDIHP-SIV 410
Query: 282 SFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQ 341
++N +++G C + A+R+ EM+ + I DV++Y +++ + K+ L +++D+
Sbjct: 411 TYNTLIDGLCE-SGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDE 469
Query: 342 MKNKKITPDRKVYNAVIHALAKGRL--VKEAVNLLQTM-EKNNVTPDVVTYNSLIKPLCK 398
M K I PD Y A+ + RL +A L + M ++ PD+ YN I LCK
Sbjct: 470 MLRKGIKPDGYAYTT--RAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCK 527
Query: 399 NRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFE----LLDKMRELGCYPTIE 454
+ +A E + + + P T+ R +E F+ L D+M YP++
Sbjct: 528 VGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGY-LENGQFKMARNLYDEMLRKRLYPSVI 586
Query: 455 TYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEM 514
TY +LI + +L++ F+ M++ GV + ++ L++G+ G + EA+ Y +M
Sbjct: 587 TYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKM 646
Query: 515 QRKGFLPEPKTEQML 529
+ +G P + ML
Sbjct: 647 EEEGIPPNKYSYTML 661
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 74/141 (52%)
Query: 300 AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIH 359
A ++ EM ++ + V++Y ++ ++K+ +L + FQ +MK + + P+ +NA+++
Sbjct: 569 ARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLY 628
Query: 360 ALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITP 419
+ K + EA L ME+ + P+ +Y LI C K +E +++ +M+ + I P
Sbjct: 629 GMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEP 688
Query: 420 TIRTFHAFFRILRVEEEVFEL 440
T A F+ L + E E+
Sbjct: 689 DGYTHRALFKHLEKDHESREV 709
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 102/241 (42%), Gaps = 7/241 (2%)
Query: 304 WHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAK 363
+ +M ++G V + ++ S + K +++ M I P +N ++ + K
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 364 GRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRT 423
++ + M++ N+ VTYN LI KN K++EA+ DM + T +
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 424 FHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMR 480
F+ + ++ + + D+M G YPT TY + I C + ++D+ ++ + M
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM- 369
Query: 481 EDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTE 540
+ D SY L+HG GK EA + +++ P T L L E
Sbjct: 370 ---AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 541 G 541
G
Sbjct: 427 G 427
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 176/383 (45%), Gaps = 14/383 (3%)
Query: 152 DWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTP 211
D + F A +Q G+ H+ Y ++ L + +KF ++ M+ +
Sbjct: 68 DPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKY----ETCRFQ 123
Query: 212 QTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQV--GIDEFQGLLSALCRYKNVQDAEHLL 269
++L + + ++ + D+ + + + +V ++ L+ L V + LL
Sbjct: 124 ESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLL 183
Query: 270 FCNKNVFPLEIKS--FNIILNGWCNLIVSAREAERVWHEMSKRGIQH-DVVSYASIMSCY 326
K+ L+ + FNI++ C A V EM + GI + + ++Y+++M C
Sbjct: 184 LYAKHNLGLQPNTCIFNILVKHHCK-NGDINFAFLVVEEMKRSGISYPNSITYSTLMDCL 242
Query: 327 SKSSKLYKVFQLFDQMKNKK-ITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPD 385
S+ + +LF+ M +K+ I+PD +N +I+ + V+ A +L M+KN P+
Sbjct: 243 FAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPN 302
Query: 386 VVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNI---TPTIRTFHAFFRILRVEEEVFELLD 442
V Y++L+ CK KI EAK+ F+++ K + T T F +E +LL
Sbjct: 303 VYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLG 362
Query: 443 KMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNG 502
+M+ C TY +++R + +E ++ + +GV ++ SY ++++ L NG
Sbjct: 363 EMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNG 422
Query: 503 KVKEAHDYYIEMQRKGFLPEPKT 525
++++A + M +G P T
Sbjct: 423 ELEKAVKFLSVMSERGIWPHHAT 445
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 142/290 (48%), Gaps = 13/290 (4%)
Query: 197 EVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY-AFKRFGFQVGIDEFQGLLSA 255
E+ R G + P+ +T TL+ + + ++ A+ F + G F +++
Sbjct: 221 EMKRSGISYPNSITYSTLMDCLFAHSRSKE---AVELFEDMISKEGISPDPVTFNVMING 277
Query: 256 LCRYKNVQDAEHLL-FCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQH 314
CR V+ A+ +L F KN + +++ ++NG+C + +EA++ + E+ K G++
Sbjct: 278 FCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCK-VGKIQEAKQTFDEVKKTGLKL 336
Query: 315 DVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLL 374
D V Y ++M+C+ ++ + + +L +MK + D YN ++ L+ +EA+ +L
Sbjct: 337 DTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQML 396
Query: 375 QTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE 434
V + +Y ++ LC N ++++A + + M +R I P T++ ++R+
Sbjct: 397 DQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNEL--VVRLC 454
Query: 435 EEVF-----ELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMM 479
E + +L +G P +++ ++ C+ RKL VF++ + +
Sbjct: 455 ESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSL 504
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 107/221 (48%), Gaps = 29/221 (13%)
Query: 344 NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVT-PDVVTYNSLIKPLCKNRKI 402
N + P+ ++N ++ K + A +++ M+++ ++ P+ +TY++L+ L + +
Sbjct: 189 NLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRS 248
Query: 403 DEAKEVFNDMM-KRNITPTIRTFH----AFFRILRVEEEVFELLDKMRELGCYPTIETYI 457
EA E+F DM+ K I+P TF+ F R VE ++LD M++ GC P + Y
Sbjct: 249 KEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAK-KILDFMKKNGCNPNVYNYS 307
Query: 458 MLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQR- 516
L+ FC+ K+ E + ++ +++ G+ D Y L++ NG+ EA EM+
Sbjct: 308 ALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKAS 367
Query: 517 -------------KGFLPEPKTE---QMLQAWLSGRQGTEG 541
+G E ++E QML W G+EG
Sbjct: 368 RCRADTLTYNVILRGLSSEGRSEEALQMLDQW-----GSEG 403
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/244 (19%), Positives = 105/244 (43%), Gaps = 15/244 (6%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
++ MI+ + + + A +++ M+ G P++ L+ +C V + A TF
Sbjct: 271 FNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM---NGFCKVGKIQEAKQTFD 327
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF------CNKNVFPLEIKSFNIILNG 289
K+ G ++ + L++ CR +A LL C + ++N+IL G
Sbjct: 328 EVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTL-----TYNVILRG 382
Query: 290 WCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITP 349
+ S EA ++ + G+ + SY I++ + +L K + M + I P
Sbjct: 383 LSSEGRS-EEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWP 441
Query: 350 DRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVF 409
+N ++ L + + V +L + + P ++ ++++ +CK RK+ E+
Sbjct: 442 HHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELL 501
Query: 410 NDMM 413
+ ++
Sbjct: 502 DSLV 505
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 151/313 (48%), Gaps = 9/313 (2%)
Query: 216 IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNK 273
+MIR + V +A F+ +++ + + + L++A R + A +L+
Sbjct: 16 MMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRA 75
Query: 274 NVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLY 333
+ P ++N ++N C + REA V +M+ G+ D+V++ ++S Y +
Sbjct: 76 AIAPSR-STYNNLINA-CGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 334 KVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTM--EKNNVTPDVVTYNS 391
K F+ MK K+ PD +N +I+ L+K +A++L +M ++ PDVVT+ S
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 392 LIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAF---FRILRVEEEVFELLDKMRELG 448
++ +I+ + VF M+ + P I +++A + + + +L +++ G
Sbjct: 194 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 253
Query: 449 CYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAH 508
P + +Y L+ + R R+ + +++ MMR++ + +Y LI NG + EA
Sbjct: 254 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV 313
Query: 509 DYYIEMQRKGFLP 521
+ + +M++ G P
Sbjct: 314 EIFRQMEQDGIKP 326
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 169/405 (41%), Gaps = 18/405 (4%)
Query: 170 AHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGR 229
A S Y+++I+ G + A + + M G GP LVT I++ Y + R +
Sbjct: 78 APSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHN---IVLSAYKSGRQYSK 134
Query: 230 AINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHL-LFCNKNVFPLEIKSFNIILN 288
A++ F K G +V D + C K Q ++ L LF + E + +
Sbjct: 135 ALSYFELMK--GAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 192
Query: 289 GWCNLIVSAREAER---VWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNK 345
+L E E V+ M G++ ++VSY ++M Y+ + +K
Sbjct: 193 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 252
Query: 346 KITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEA 405
I PD Y ++++ + R +A + M K P+VVTYN+LI N + EA
Sbjct: 253 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEA 312
Query: 406 KEVFNDMMKRNITP---TIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRK 462
E+F M + I P ++ T A + + V +L + G Y I
Sbjct: 313 VEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGS 372
Query: 463 FCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
+ +L++ ++ MR+ V D ++ +LI G K EA Y EM+ L
Sbjct: 373 YINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED---LSI 429
Query: 523 PKTEQMLQAWLSGRQGTEGQVTDLEH--NQLEDDTVEKKVKATPS 565
P T+++ + L +GQVT+ E NQ++ E V A S
Sbjct: 430 PLTKEVYSSVLCAYS-KQGQVTEAESIFNQMKMAGCEPDVIAYTS 473
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 102/229 (44%), Gaps = 5/229 (2%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
+A ++ EM K + D +Y ++++ + ++ + L D M I P R YN +I
Sbjct: 29 QARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLI 88
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
+A +EA+ + + M N V PD+VT+N ++ R+ +A F M +
Sbjct: 89 NACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVR 148
Query: 419 PTIRTFHAFFRILR---VEEEVFELLDKMRE--LGCYPTIETYIMLIRKFCRWRKLDEVF 473
P TF+ L + +L + MRE C P + T+ ++ + +++
Sbjct: 149 PDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCR 208
Query: 474 KIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
++ M +G+ + SY L+ ++G A ++++ G +P+
Sbjct: 209 AVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPD 257
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 136/313 (43%), Gaps = 8/313 (2%)
Query: 195 LIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLS 254
+ E M G P++V+ L+ Y G A++ K+ G + + LL+
Sbjct: 210 VFEAMVAEGLKPNIVSYNALM---GAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLN 266
Query: 255 ALCRYKNVQDA-EHLLFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQ 313
+ R + A E L K + ++N +++ + + A EA ++ +M + GI+
Sbjct: 267 SYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLA-EAVEIFRQMEQDGIK 325
Query: 314 HDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNL 373
+VVS ++++ S+S K V + +++ I + YN+ I + +++A+ L
Sbjct: 326 PNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIAL 385
Query: 374 LQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRV 433
Q+M K V D VT+ LI C+ K EA +M +I T + +
Sbjct: 386 YQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSK 445
Query: 434 EEEVFE---LLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSS 490
+ +V E + ++M+ GC P + Y ++ + K + +++ M +G+ D +
Sbjct: 446 QGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIA 505
Query: 491 YIVLIHGLFLNGK 503
L+ G+
Sbjct: 506 CSALMRAFNKGGQ 518
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 149/357 (41%), Gaps = 14/357 (3%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
+V Y+++I G A + M G P++V+ TLL + +V +
Sbjct: 292 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVL 351
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKS----FNIIL 287
+ A + G + + SA+ Y N + E + +++ ++K+ F I++
Sbjct: 352 S---AAQSRGINLNTAAYN---SAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILI 405
Query: 288 NGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKI 347
+G C + EA EM I Y+S++ YSK ++ + +F+QMK
Sbjct: 406 SGSCRM-SKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGC 464
Query: 348 TPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKE 407
PD Y +++HA +A L ME N + PD + ++L++ K +
Sbjct: 465 EPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFV 524
Query: 408 VFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCY-PTIETYI--MLIRKFC 464
+ + M ++ I T F F +E +D ++ + Y P++ + ++ F
Sbjct: 525 LMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFG 584
Query: 465 RWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
+ K++ + K++ + GV + +Y +L+ L G ++ + M G P
Sbjct: 585 KSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQP 641
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 79/168 (47%), Gaps = 3/168 (1%)
Query: 353 VYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDM 412
+YN +I A+ V +A L M+K + PD TY++LI + + A + +DM
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 413 MKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKL 469
++ I P+ T++ E E+ KM + G P + T+ +++ + R+
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 470 DEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRK 517
+ + +M+ V D +++ ++I+ L G+ +A D + M+ K
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREK 180
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 125/259 (48%), Gaps = 15/259 (5%)
Query: 259 YKNVQDAEHLLFCNKNVFPLE--IKSFNIILNGWCNLIVSAREAERVWHEMSKR-GIQHD 315
Y + + H LF E +KSFN +L+ + N EA + + E+ ++ GI D
Sbjct: 134 YSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVN-SKKLDEAMKTFKELPEKLGITPD 192
Query: 316 VVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQ 375
+V+Y +++ + + + +F++++ PD +N ++ + L E +
Sbjct: 193 LVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWD 252
Query: 376 TMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE- 434
M+ N++P++ +YNS ++ L +N+K +A + + M I+P + T++A RV+
Sbjct: 253 LMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDN 312
Query: 435 --EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSS-- 490
EEV + ++M+E G P TY MLI C+ LD ++ E+ + H S
Sbjct: 313 NLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEV----SEEAIKHKLLSRP 368
Query: 491 --YIVLIHGLFLNGKVKEA 507
Y ++ L GK+ EA
Sbjct: 369 NMYKPVVERLMGAGKIDEA 387
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 8/218 (3%)
Query: 322 IMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTM-EKN 380
IM Y S +LFD+M K +NA++ A + + EA+ + + EK
Sbjct: 128 IMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKL 187
Query: 381 NVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFF-----RILRVEE 435
+TPD+VTYN++IK LC+ +D+ +F ++ K P + +F+ R L VE
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEG 247
Query: 436 EVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLI 495
+ + D M+ P I +Y +R R +K + + ++M+ +G+S D +Y LI
Sbjct: 248 D--RIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALI 305
Query: 496 HGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWL 533
++ ++E Y EM+ KG P+ T ML L
Sbjct: 306 TAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLL 343
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 7/212 (3%)
Query: 210 TPQTLLIMIRKYCAVRDVGRAINTFYAF-KRFGFQVGIDEFQGLLSALCRYKNVQDAEHL 268
T ++ ++ Y + + A+ TF ++ G + + ++ ALCR ++ D +
Sbjct: 156 TVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSI 215
Query: 269 LF-CNKNVFPLEIKSFNIILNGWC--NLIVSAREAERVWHEMSKRGIQHDVVSYASIMSC 325
KN F ++ SFN +L + L V E +R+W M + + ++ SY S +
Sbjct: 216 FEELEKNGFEPDLISFNTLLEEFYRRELFV---EGDRIWDLMKSKNLSPNIRSYNSRVRG 272
Query: 326 YSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPD 385
+++ K L D MK + I+PD YNA+I A ++E + M++ +TPD
Sbjct: 273 LTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPD 332
Query: 386 VVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNI 417
VTY LI LCK +D A EV + +K +
Sbjct: 333 TVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKL 364
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 111/240 (46%), Gaps = 8/240 (3%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLI-EVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRA 230
+V+ +++++S +K D A E+ G P LVT T MI+ C +
Sbjct: 156 TVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNT---MIKALCRKGSMDDI 212
Query: 231 INTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHL--LFCNKNVFPLEIKSFNIILN 288
++ F ++ GF+ + F LL R + + + + L +KN+ P I+S+N +
Sbjct: 213 LSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSP-NIRSYNSRVR 271
Query: 289 GWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKIT 348
G +A + M GI DV +Y ++++ Y + L +V + +++MK K +T
Sbjct: 272 GLTR-NKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLT 330
Query: 349 PDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEV 408
PD Y +I L K + AV + + K+ + Y +++ L KIDEA ++
Sbjct: 331 PDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQL 390
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 133/258 (51%), Gaps = 13/258 (5%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
S Y+S+I K + D+A E M G G P+++T +L+ C + +A+
Sbjct: 583 SCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLM---NGLCKNNRMDQAL 639
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNG 289
K G ++ I + L+ C+ N++ A L + + P + +N +++G
Sbjct: 640 EMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQ-PIYNSLISG 698
Query: 290 WCNL--IVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKI 347
+ NL +V+A + ++ +M K G++ D+ +Y +++ K L +L+ +M+ +
Sbjct: 699 FRNLGNMVAALD---LYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGL 755
Query: 348 TPDRKVYNAVIHALAK-GRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAK 406
PD +Y +++ L+K G+ VK V + + M+KNNVTP+V+ YN++I + +DEA
Sbjct: 756 VPDEIIYTVIVNGLSKKGQFVK-VVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAF 814
Query: 407 EVFNDMMKRNITPTIRTF 424
+ ++M+ + I P TF
Sbjct: 815 RLHDEMLDKGILPDGATF 832
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/399 (21%), Positives = 179/399 (44%), Gaps = 19/399 (4%)
Query: 177 HSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYA 236
++++S L K K D A L+ M G GP++V+ +++ +C +++ A F
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVML---GHCRQKNMDLARIVFSN 503
Query: 237 FKRFGFQVGIDEFQGLLSALCRYKNVQDA----EHLLFCNKNVFPLEIKSFNIILNGWCN 292
G + + L+ R + Q+A H+ N V + + I+NG C
Sbjct: 504 ILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGV---VYQTIINGLCK 560
Query: 293 LIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRK 352
+ +++ E + + + ++ + +SY SI+ + K ++ +++M I+P+
Sbjct: 561 VGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVI 620
Query: 353 VYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDM 412
Y ++++ L K + +A+ + M+ V D+ Y +LI CK ++ A +F+++
Sbjct: 621 TYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSEL 680
Query: 413 MKRNITPTIRTFHAF---FRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKL 469
++ + P+ +++ FR L +L KM + G + TY LI + L
Sbjct: 681 LEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNL 740
Query: 470 DEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
+++ M+ G+ D Y V+++GL G+ + + EM++ P +
Sbjct: 741 ILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNV---LIY 797
Query: 530 QAWLSGRQGTEGQVTDLEHNQLEDDTVEKKVKATPSKFD 568
A ++G EG + E +L D+ ++K + + FD
Sbjct: 798 NAVIAGHY-REGNLD--EAFRLHDEMLDKGILPDGATFD 833
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 104/205 (50%), Gaps = 2/205 (0%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
+A R+ EM GI +VV+ S+++ + K++ L LFD+M+ + +P+ ++ +I
Sbjct: 322 DAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLI 381
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
K +++A+ + ME +TP V +++I+ K +K +EA ++F++ + +
Sbjct: 382 EWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA 441
Query: 419 PTI--RTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIW 476
T ++ +E ELL KM G P + +Y ++ CR + +D ++
Sbjct: 442 NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVF 501
Query: 477 NMMREDGVSHDRSSYIVLIHGLFLN 501
+ + E G+ + +Y +LI G F N
Sbjct: 502 SNILEKGLKPNNYTYSILIDGCFRN 526
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 5/227 (2%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKI-TPDRKVYNAV 357
EA V +RG + D + Y+ + K+ L L +MK KK+ P ++ Y +V
Sbjct: 251 EALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSV 310
Query: 358 IHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNI 417
I A K + +A+ L M + ++ +VV SLI CKN + A +F+ M K
Sbjct: 311 ILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGP 370
Query: 418 TPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFK 474
+P TF R E+ E KM LG P++ +I+ + + +K +E K
Sbjct: 371 SPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALK 430
Query: 475 IWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
+++ E G+++ +L L GK EA + +M+ +G P
Sbjct: 431 LFDESFETGLANVFVCNTIL-SWLCKQGKTDEATELLSKMESRGIGP 476
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 97/227 (42%), Gaps = 6/227 (2%)
Query: 311 GIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEA 370
G + + ++ +++ YSK + + +QM + P N + AL + + EA
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEA 217
Query: 371 VNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTF----HA 426
L M V D VT L++ + K EA EV + ++R P + A
Sbjct: 218 KELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQA 277
Query: 427 FFRILRVEEEVFELLDKMRELG-CYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVS 485
+ L + LL +M+E C P+ ETY +I + +D+ ++ + M DG+S
Sbjct: 278 CCKTLDL-AMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGIS 336
Query: 486 HDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAW 532
+ + LI G N + A + +M+++G P T +L W
Sbjct: 337 MNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEW 383
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 152/362 (41%), Gaps = 44/362 (12%)
Query: 166 QPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVR 225
+P V+ Y++M+ + + KF A L++ MR G P L++ TL I R
Sbjct: 218 EPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTL-INARLKSGGL 276
Query: 226 DVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNI 285
A+ + G + + LLSA R N
Sbjct: 277 TPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSN------------------------ 312
Query: 286 ILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNK 345
L+G A +V+ +M Q D+ +Y +++S Y + + +LF +++ K
Sbjct: 313 -LDG----------AVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELK 361
Query: 346 KITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEA 405
PD YN++++A A+ R ++ + Q M+K D +TYN++I K ++D A
Sbjct: 362 GFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLA 421
Query: 406 KEVFNDM---MKRNITPTIRTFHAFFRILRVEEEVFE---LLDKMRELGCYPTIETYIML 459
+++ DM RN P T+ L E L+ +M ++G PT++TY L
Sbjct: 422 LQLYKDMKGLSGRN--PDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSAL 479
Query: 460 IRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGF 519
I + + K +E ++ M G D +Y V++ L + ++A Y +M G
Sbjct: 480 ICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGH 539
Query: 520 LP 521
P
Sbjct: 540 TP 541
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 4/216 (1%)
Query: 311 GIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEA 370
G++ D ++Y +++S S+ S L ++F+ M+ + PD YNA+I + L EA
Sbjct: 292 GLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEA 351
Query: 371 VNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRI 430
L +E PD VTYNSL+ + R ++ KEV+ M K T++ +
Sbjct: 352 ERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHM 411
Query: 431 LRVEEEV---FELLDKMREL-GCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSH 486
+ ++ +L M+ L G P TY +LI + + E + + M + G+
Sbjct: 412 YGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKP 471
Query: 487 DRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
+Y LI G GK +EA D + M R G P+
Sbjct: 472 TLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPD 507
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/362 (19%), Positives = 156/362 (43%), Gaps = 8/362 (2%)
Query: 165 KQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAV 224
+Q G ++ ++S++S + ++ A + M G P T +++ I++ C
Sbjct: 779 RQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSP---TVESINILLHALCVD 835
Query: 225 RDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPL-EIKSF 283
+ + GF++ +L A R N+ + + + K L I+ +
Sbjct: 836 GRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLY 895
Query: 284 NIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMK 343
+++ C R+AE + EM + + ++ + S++ Y+ K Q++ ++K
Sbjct: 896 RMMIELLCK-GKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIK 954
Query: 344 NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKID 403
+ PD YN +I + R +E L+Q M + P + TY SLI K + ++
Sbjct: 955 ETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLE 1014
Query: 404 EAKEVFNDMMKRNITPTIRTFHAFFRILR---VEEEVFELLDKMRELGCYPTIETYIMLI 460
+A+++F +++ + + +H +I R + + +LL M+ G PT+ T +L+
Sbjct: 1015 QAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLM 1074
Query: 461 RKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFL 520
+ E K+ + +++ V Y +I + + +EM+++G
Sbjct: 1075 VSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLE 1134
Query: 521 PE 522
P+
Sbjct: 1135 PD 1136
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 164/387 (42%), Gaps = 44/387 (11%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y +I GK + + A +++ +R G P L T +L+ + C + RAI F
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQ-CGCYERARAI--FN 811
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIILNGWCNLIV 295
R G ++ LL ALC +++ L V
Sbjct: 812 TMMRDGPSPTVESINILLHALCVDGRLEE----------------------------LYV 843
Query: 296 SAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYN 355
E + + ++SK I ++ ++++ +++V +++ MK P ++Y
Sbjct: 844 VVEELQDMGFKISKSSI-------LLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYR 896
Query: 356 AVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKR 415
+I L KG+ V++A ++ ME+ N ++ +NS++K + +V+ + +
Sbjct: 897 MMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKET 956
Query: 416 NITPTIRTFHAFFRIL---RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEV 472
+ P T++ + R EE + L+ +MR LG P ++TY LI F + + L++
Sbjct: 957 GLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQA 1016
Query: 473 FKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAW 532
+++ + G+ DRS Y ++ +G +A M+ G P T +L
Sbjct: 1017 EQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVS 1076
Query: 533 LSGR---QGTEGQVTDLEHNQLEDDTV 556
S Q E +++L+ ++E T+
Sbjct: 1077 YSSSGNPQEAEKVLSNLKDTEVELTTL 1103
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 157/355 (44%), Gaps = 49/355 (13%)
Query: 175 EYHSMISILGKMR---KFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
E +++SILG + A+ L+E ++ +G + + L+++ +C V ++ A+
Sbjct: 608 ENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVL---HCKVNNLSAAL 664
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIILNGWC 291
+ ++A + C + + E LL C C
Sbjct: 665 DEYFA-------------DPCVHGWC-FGSSTMYETLLHC-------------------C 691
Query: 292 NLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNK----KI 347
EA +V+ ++ G + S++ Y K Q+ +Q + K
Sbjct: 692 VANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFAC 751
Query: 348 TPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKE 407
+P +Y +I A K +L ++A +++ + ++ TPD+ T+NSL+ + + A+
Sbjct: 752 SP---MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARA 808
Query: 408 VFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIMLIRKFC 464
+FN MM+ +PT+ + + L V+ EE++ ++++++++G + + ++++ F
Sbjct: 809 IFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFA 868
Query: 465 RWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGF 519
R + EV KI++ M+ G Y ++I L +V++A EM+ F
Sbjct: 869 RAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANF 923
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 107/251 (42%), Gaps = 30/251 (11%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y++MIS+ G+ A L + G P VT +LL + R+ + +
Sbjct: 335 YNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLY---AFARERNTEKVKEVYQ 391
Query: 236 AFKRFGFQVGIDEF-----------QGLLS-ALCRYKNVQDAEHLLFCNKNVFPLEIKSF 283
++ GF G DE QG L AL YK+++ +N P I ++
Sbjct: 392 QMQKMGF--GKDEMTYNTIIHMYGKQGQLDLALQLYKDMKG-----LSGRN--PDAI-TY 441
Query: 284 NIILN--GWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQ 341
++++ G N V EA + EM GI+ + +Y++++ Y+K+ K + F
Sbjct: 442 TVLIDSLGKANRTV---EAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSC 498
Query: 342 MKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRK 401
M PD Y+ ++ L +G ++A L + M + TP Y +I L K +
Sbjct: 499 MLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENR 558
Query: 402 IDEAKEVFNDM 412
D+ ++ DM
Sbjct: 559 SDDIQKTIRDM 569
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 113/226 (50%), Gaps = 3/226 (1%)
Query: 300 AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIH 359
AERV +SK G +V+SY ++M Y + K +F +M++ P Y ++
Sbjct: 158 AERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILK 217
Query: 360 ALAKGRLVKEAVNLLQTM---EKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRN 416
+G KEA + +T+ +K+ + PD Y+ +I K ++A++VF+ M+ +
Sbjct: 218 TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKG 277
Query: 417 ITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIW 476
+ + T+++ +EV ++ D+M+ P + +Y +LI+ + R R+ +E ++
Sbjct: 278 VPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVF 337
Query: 477 NMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
M + GV +Y +L+ ++G V++A + M+R P+
Sbjct: 338 EEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPD 383
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/370 (18%), Positives = 161/370 (43%), Gaps = 41/370 (11%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G +V Y +++ G+ K + A + M+ G PS +T Q +L + ++
Sbjct: 169 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 228
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIIL 287
T K+ + + ++ + N + A + ++ + +
Sbjct: 229 EEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVF---SSMVGKGVPQSTVTY 285
Query: 288 NGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKI 347
N + S +E +++ +M + IQ DVVSYA ++ Y ++ + + +F++M + +
Sbjct: 286 NSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 345
Query: 348 TPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKE 407
P K YN ++ A A +V++A + ++M ++ + PD+ +Y +++ ++ A++
Sbjct: 346 RPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEK 405
Query: 408 VFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWR 467
FF+ ++V+ G P I TY LI+ + +
Sbjct: 406 -------------------FFKRIKVD-------------GFEPNIVTYGTLIKGYAKAN 433
Query: 468 KLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVK---EAHDYYIEMQRKGFLPEPK 524
++++ +++ MR G+ +++ +L + +G+ K A +Y EM+ G P+ K
Sbjct: 434 DVEKMMEVYEKMRLSGIKANQT---ILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQK 490
Query: 525 TEQMLQAWLS 534
+ +L + S
Sbjct: 491 AKNVLLSLAS 500
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 128/286 (44%), Gaps = 21/286 (7%)
Query: 248 EFQGLLSALCRYKNVQDAEHLL-FCNKNVFPLEIKSFNIIL-----NGWCNLIVSAREAE 301
+F L++A + N AE +L +K + S+ ++ G CN AE
Sbjct: 141 DFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCN------NAE 194
Query: 302 RVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKK---ITPDRKVYNAVI 358
++ M G + ++Y I+ + + K + ++F+ + ++K + PD+K+Y+ +I
Sbjct: 195 AIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMI 254
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
+ K ++A + +M V VTYNSL + E ++++ M + +I
Sbjct: 255 YMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQ 311
Query: 419 PTIRTFHAFFRIL---RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKI 475
P + ++ + R EEE + ++M + G PT + Y +L+ F +++ +
Sbjct: 312 PDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTV 371
Query: 476 WNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
+ MR D + D SY ++ ++ A ++ ++ GF P
Sbjct: 372 FKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEP 417
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 116/277 (41%), Gaps = 36/277 (12%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLL-------------------- 215
YH MI + K ++ A + M G G S VT +L+
Sbjct: 250 YHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSD 309
Query: 216 ---------IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAE 266
++I+ Y R A++ F G + + LL A V+ A+
Sbjct: 310 IQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAK 369
Query: 267 HLLFCNKN--VFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMS 324
+ + +FP ++ S+ +L+ + N AE+ + + G + ++V+Y +++
Sbjct: 370 TVFKSMRRDRIFP-DLWSYTTMLSAYVN-ASDMEGAEKFFKRIKVDGFEPNIVTYGTLIK 427
Query: 325 CYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTP 384
Y+K++ + K+ +++++M+ I ++ + ++ A + + A+ + ME V P
Sbjct: 428 GYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPP 487
Query: 385 DVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTI 421
D N L+ +++EAKE+ RN T TI
Sbjct: 488 DQKAKNVLLSLASTQDELEEAKELTG---IRNETATI 521
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 163/384 (42%), Gaps = 29/384 (7%)
Query: 154 EAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTP-- 211
E A FF W + H + MI +LG++ K + A ++ M P P
Sbjct: 131 EHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDM------PEKGVPWD 184
Query: 212 -QTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL- 269
+++I Y V ++ F K G + I + L + R A+
Sbjct: 185 EDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFN 244
Query: 270 -FCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSK 328
++ V P ++N++L G+ L + A R + +M RGI D ++ ++++ + +
Sbjct: 245 KMVSEGVEPTR-HTYNLMLWGFF-LSLRLETALRFFEDMKTRGISPDDATFNTMINGFCR 302
Query: 329 SSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVT 388
K+ + +LF +MK KI P Y +I V + + + + M + + P+ T
Sbjct: 303 FKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATT 362
Query: 389 YNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEE------VFELLD 442
Y++L+ LC K+ EAK + +MM ++I P + F ++L + + E+L
Sbjct: 363 YSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSI--FLKLLVSQSKAGDMAAATEVLK 420
Query: 443 KMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMRE--------DGVSHDRSSYIVL 494
M L Y +LI C+ + K+ + + E D + + S+Y +
Sbjct: 421 AMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPI 480
Query: 495 IHGLFLNGKVKEAHDYYIEMQRKG 518
I L NG+ +A + ++ ++G
Sbjct: 481 IEYLCNNGQTAKAEVLFRQLMKRG 504
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 6/230 (2%)
Query: 304 WHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAK 363
W E S I+HD ++ ++ + SKL + M K + D ++ +I + K
Sbjct: 139 WTERSGL-IRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGK 197
Query: 364 GRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRT 423
+V+E+V + Q M+ V + +YNSL K + + + AK FN M+ + PT T
Sbjct: 198 AGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHT 257
Query: 424 FH----AFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMM 479
++ FF LR+ E + M+ G P T+ +I FCR++K+DE K++ M
Sbjct: 258 YNLMLWGFFLSLRL-ETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEM 316
Query: 480 REDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
+ + + SY +I G +V + + EM+ G P T L
Sbjct: 317 KGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTL 366
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 142/368 (38%), Gaps = 56/368 (15%)
Query: 154 EAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQT 213
E A FF K G + +++MI+ + +K D A L M+G GPS+V+ T
Sbjct: 272 ETALRFF-EDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTT 330
Query: 214 LLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNK 273
MI+ Y AV V + F + G + + LL LC + +A+++L K
Sbjct: 331 ---MIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNIL---K 384
Query: 274 NVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLY 333
N+ M+K D + ++ SK+ +
Sbjct: 385 NM-------------------------------MAKHIAPKDNSIFLKLLVSQSKAGDMA 413
Query: 334 KVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTM--------EKNNVTPD 385
++ M + + Y +I K A+ LL T+ ++ + +
Sbjct: 414 AATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEME 473
Query: 386 VVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE------EEVFE 439
YN +I+ LC N + +A+ +F +MKR + A ++R + +E
Sbjct: 474 PSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQ----DALNNLIRGHAKEGNPDSSYE 529
Query: 440 LLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLF 499
+L M G Y +LI+ + + + + M EDG D S + +I LF
Sbjct: 530 ILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLF 589
Query: 500 LNGKVKEA 507
+G+V+ A
Sbjct: 590 EDGRVQTA 597
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 113/226 (50%), Gaps = 3/226 (1%)
Query: 300 AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIH 359
AERV +SK G +V+SY ++M Y + K +F +M++ P Y ++
Sbjct: 165 AERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILK 224
Query: 360 ALAKGRLVKEAVNLLQTM---EKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRN 416
+G KEA + +T+ +K+ + PD Y+ +I K ++A++VF+ M+ +
Sbjct: 225 TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKG 284
Query: 417 ITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIW 476
+ + T+++ +EV ++ D+M+ P + +Y +LI+ + R R+ +E ++
Sbjct: 285 VPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVF 344
Query: 477 NMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
M + GV +Y +L+ ++G V++A + M+R P+
Sbjct: 345 EEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPD 390
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/370 (18%), Positives = 161/370 (43%), Gaps = 41/370 (11%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G +V Y +++ G+ K + A + M+ G PS +T Q +L + ++
Sbjct: 176 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 235
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIIL 287
T K+ + + ++ + N + A + ++ + +
Sbjct: 236 EEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVF---SSMVGKGVPQSTVTY 292
Query: 288 NGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKI 347
N + S +E +++ +M + IQ DVVSYA ++ Y ++ + + +F++M + +
Sbjct: 293 NSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 352
Query: 348 TPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKE 407
P K YN ++ A A +V++A + ++M ++ + PD+ +Y +++ ++ A++
Sbjct: 353 RPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEK 412
Query: 408 VFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWR 467
FF+ ++V+ G P I TY LI+ + +
Sbjct: 413 -------------------FFKRIKVD-------------GFEPNIVTYGTLIKGYAKAN 440
Query: 468 KLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVK---EAHDYYIEMQRKGFLPEPK 524
++++ +++ MR G+ +++ +L + +G+ K A +Y EM+ G P+ K
Sbjct: 441 DVEKMMEVYEKMRLSGIKANQT---ILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQK 497
Query: 525 TEQMLQAWLS 534
+ +L + S
Sbjct: 498 AKNVLLSLAS 507
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 128/286 (44%), Gaps = 21/286 (7%)
Query: 248 EFQGLLSALCRYKNVQDAEHLL-FCNKNVFPLEIKSFNIIL-----NGWCNLIVSAREAE 301
+F L++A + N AE +L +K + S+ ++ G CN AE
Sbjct: 148 DFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCN------NAE 201
Query: 302 RVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKK---ITPDRKVYNAVI 358
++ M G + ++Y I+ + + K + ++F+ + ++K + PD+K+Y+ +I
Sbjct: 202 AIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMI 261
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
+ K ++A + +M V VTYNSL + E ++++ M + +I
Sbjct: 262 YMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQ 318
Query: 419 PTIRTFHAFFRIL---RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKI 475
P + ++ + R EEE + ++M + G PT + Y +L+ F +++ +
Sbjct: 319 PDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTV 378
Query: 476 WNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
+ MR D + D SY ++ ++ A ++ ++ GF P
Sbjct: 379 FKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEP 424
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 116/277 (41%), Gaps = 36/277 (12%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLL-------------------- 215
YH MI + K ++ A + M G G S VT +L+
Sbjct: 257 YHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSD 316
Query: 216 ---------IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAE 266
++I+ Y R A++ F G + + LL A V+ A+
Sbjct: 317 IQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAK 376
Query: 267 HLLFCNKN--VFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMS 324
+ + +FP ++ S+ +L+ + N AE+ + + G + ++V+Y +++
Sbjct: 377 TVFKSMRRDRIFP-DLWSYTTMLSAYVN-ASDMEGAEKFFKRIKVDGFEPNIVTYGTLIK 434
Query: 325 CYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTP 384
Y+K++ + K+ +++++M+ I ++ + ++ A + + A+ + ME V P
Sbjct: 435 GYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPP 494
Query: 385 DVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTI 421
D N L+ +++EAKE+ RN T TI
Sbjct: 495 DQKAKNVLLSLASTQDELEEAKELTG---IRNETATI 528
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/417 (20%), Positives = 177/417 (42%), Gaps = 57/417 (13%)
Query: 166 QPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLI--MIRKYCA 223
+ G+ S+ Y ++++ L + + F + +LI + G + P T+L +I
Sbjct: 347 EEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG-----LKPDTILFNAIINASSE 401
Query: 224 VRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIK 281
++ +A+ F K G + F L+ + ++++ LL + +
Sbjct: 402 SGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDR 461
Query: 282 SFNIILNGWCNLIVSAREAERVW---HEMSKRGIQHDVVSY------------------- 319
+ NI++ WCN R+ E W ++M G++ DVV++
Sbjct: 462 TCNILVQAWCN----QRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDM 517
Query: 320 -----------------ASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALA 362
+I++ Y + K+ + + F +MK + P+ V+N++I
Sbjct: 518 IIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFL 577
Query: 363 KGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIR 422
+ ++ ME+ V PDVVT+++L+ + +E++ DM++ I P I
Sbjct: 578 NINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIH 637
Query: 423 TFHAF---FRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIW-NM 478
F + E+ ++L++MR+ G P + Y +I +C ++ + +++ M
Sbjct: 638 AFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM 697
Query: 479 MREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML-QAWLS 534
G+S + ++Y LI G + +A + +M+ K +P KT Q++ W S
Sbjct: 698 CGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKS 754
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 269 LFCNKNVFPLEIKSFNIILNGWCNLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCY 326
+ C+ +++S ++NG LI R EA +++ + + G + +++Y ++++
Sbjct: 308 VICSGGTTCGDVRSRTKLMNG---LIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTAL 364
Query: 327 SKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDV 386
++ + + L +++ + PD ++NA+I+A ++ + +A+ + + M+++ P
Sbjct: 365 TRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTA 424
Query: 387 VTYNSLIKPLCKNRKIDEAKEVFNDMMKRN--ITPTIRTFHAFFRIL---RVEEEVFELL 441
T+N+LIK K K++E+ + DMM R+ + P RT + + R EE + ++
Sbjct: 425 STFNTLIKGYGKIGKLEESSRLL-DMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIV 483
Query: 442 DKMRELGCYPTIETYIMLIRKFCR-WRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFL 500
KM+ G P + T+ L + + R I M + V + + +++G
Sbjct: 484 YKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCE 543
Query: 501 NGKVKEAHDYYIEMQRKGFLP 521
GK++EA ++ M+ G P
Sbjct: 544 EGKMEEALRFFYRMKELGVHP 564
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 172/386 (44%), Gaps = 12/386 (3%)
Query: 156 AFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLL 215
A T FL +Q G +V Y++M+ +M+ D A ++ M G P+ T
Sbjct: 467 AATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYS--- 523
Query: 216 IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNK 273
I+I + +D A + F+ + +++ LC+ A+ +L +
Sbjct: 524 ILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKE 583
Query: 274 NVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLY 333
+ + S+N I++G+ + A + EMS+ G +VV++ S+++ + KS+++
Sbjct: 584 KRYSMSCTSYNSIIDGFVK-VGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMD 642
Query: 334 KVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLI 393
++ +MK+ ++ D Y A+I K +K A L + + + P+V YNSLI
Sbjct: 643 LALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLI 702
Query: 394 KPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEV---FELLDKMRELGCY 450
K+D A +++ M+ I+ + T+ L + + +L ++ +LG
Sbjct: 703 SGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIV 762
Query: 451 PTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDY 510
P +++L+ + + + K+ M++ V+ + Y +I G G + EA
Sbjct: 763 PDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRL 822
Query: 511 YIEMQRKGFLPEPKTEQMLQAWLSGR 536
+ EM KG + + + + +SGR
Sbjct: 823 HDEMLEKGIVHD---DTVFNLLVSGR 845
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 164/395 (41%), Gaps = 47/395 (11%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G S Y S+I K + A +++ M G G S++ +L + YC ++
Sbjct: 305 GVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSL---VNGYCKGNEL 361
Query: 228 GRAINTFYAFKRFG-------FQVGID------EFQGLLSALCRYKNVQDAEHLLF---- 270
G+A++ F + G F V ++ E + + R K+V+ A +
Sbjct: 362 GKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTM 421
Query: 271 ---CNKNVFP---LEIKSFNIILNGW------CNLIV-------SAREAERVWHEMSKRG 311
C K P LEI FN W CN I A M ++G
Sbjct: 422 IQGCLKAESPEAALEI--FNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKG 479
Query: 312 IQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAV 371
I+ +VV Y ++M + + + +F +M K + P+ Y+ +I K + + A
Sbjct: 480 IEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAW 539
Query: 372 NLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKR-----NITPTIRTFHA 426
+++ M +N + V YN++I LCK + +AKE+ +++K + T
Sbjct: 540 DVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDG 599
Query: 427 FFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSH 486
F ++ + V E +M E G P + T+ LI FC+ ++D ++ + M+ +
Sbjct: 600 FVKVGDTDSAV-ETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKL 658
Query: 487 DRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
D +Y LI G +K A+ + E+ G +P
Sbjct: 659 DLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMP 693
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 114/264 (43%), Gaps = 17/264 (6%)
Query: 284 NIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMK 343
N+++N NL+ S++ R E++ R + +++ Y ++ ++ F M
Sbjct: 150 NVMVN---NLVDSSK---RFGFELTPRAFNY-------LLNAYIRNKRMDYAVDCFGLMV 196
Query: 344 NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKID 403
++K+ P N V+ +L + L+ EA + M V D VT L++ + RK +
Sbjct: 197 DRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPE 256
Query: 404 EAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRE----LGCYPTIETYIML 459
EA ++F +M R P F + ++ LD +RE LG + ETY +
Sbjct: 257 EAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSV 316
Query: 460 IRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGF 519
I F + ++E ++ + M G+ + L++G ++ +A D + M+ +G
Sbjct: 317 IVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGL 376
Query: 520 LPEPKTEQMLQAWLSGRQGTEGQV 543
P+ ++ W E +
Sbjct: 377 APDKVMFSVMVEWFCKNMEMEKAI 400
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 130/306 (42%), Gaps = 42/306 (13%)
Query: 238 KRFGFQVGIDEFQGLLSALCRYKNVQDAEHL--LFCNKNVFPLEIKSFNIILNGWC--NL 293
KRFGF++ F LL+A R K + A L ++ V P + N +L+ NL
Sbjct: 161 KRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPF-VPYVNNVLSSLVRSNL 219
Query: 294 IVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKV 353
I EA+ ++++M G+ D V+ +M + K + ++F ++ ++ PD +
Sbjct: 220 I---DEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLL 276
Query: 354 YNAVIHALAKGRLVKEAVNLLQTME-KNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDM 412
++ + A K + A++LL+ M K V TY S+I K ++EA V
Sbjct: 277 FSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRV---- 332
Query: 413 MKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEV 472
+D+M G ++ L+ +C+ +L +
Sbjct: 333 ----------------------------MDEMVGFGIPMSVIAATSLVNGYCKGNELGKA 364
Query: 473 FKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPK-TEQMLQA 531
++N M E+G++ D+ + V++ N ++++A ++Y+ M+ P M+Q
Sbjct: 365 LDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG 424
Query: 532 WLSGRQ 537
L
Sbjct: 425 CLKAES 430
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 128/248 (51%), Gaps = 5/248 (2%)
Query: 300 AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNK-KITPDRKVYNAVI 358
A++V+ EM R + V+S+ +++S Y S K V +LF+++ K I PD YN +I
Sbjct: 128 AQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLI 187
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
AL + + EAV LL +E + PD+VT+N+L+ + + +E++ M+++N+
Sbjct: 188 KALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVA 247
Query: 419 PTIRTFHAFFRILRVEEEVFELLDKMREL---GCYPTIETYIMLIRKFCRWRKLDEVFKI 475
IRT++A L E + EL++ EL G P + ++ +IR K+DE
Sbjct: 248 IDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAW 307
Query: 476 WNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT-EQMLQAWLS 534
+ + + G D++++ +L+ + G + A + + E K +L T +Q++ +
Sbjct: 308 YKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVK 367
Query: 535 GRQGTEGQ 542
G + E +
Sbjct: 368 GSKREEAE 375
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 111/248 (44%), Gaps = 11/248 (4%)
Query: 281 KSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFD 340
KS ++NG N R E+ + ++ Y + + +L+ V ++ +
Sbjct: 42 KSLTSLVNGERN---PKRIVEKFKKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEILE 98
Query: 341 QMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNR 400
+ K + +I K + + A + + M + V+++N+L+ ++
Sbjct: 99 EQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSK 158
Query: 401 KIDEAKEVFNDM-MKRNITPTIRTFHAFFRILRVEE---EVFELLDKMRELGCYPTIETY 456
K D +E+FN++ K +I P I +++ + L ++ E LLD++ G P I T+
Sbjct: 159 KFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTF 218
Query: 457 -IMLIRKFCRWR-KLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEM 514
+L+ + + + +L E +IW M E V+ D +Y + GL K KE + + E+
Sbjct: 219 NTLLLSSYLKGQFELGE--EIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGEL 276
Query: 515 QRKGFLPE 522
+ G P+
Sbjct: 277 KASGLKPD 284
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 143/312 (45%), Gaps = 14/312 (4%)
Query: 203 GTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNV 262
G P ++T L+ ++ +YC RAI G I + L++ CR N+
Sbjct: 239 GCPPFMITYTVLVELVCRYCGS---ARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNL 295
Query: 263 QDA----EHLLFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVS 318
++ +H+L + L ++N +L+ C+ E E + + M + V++
Sbjct: 296 EEVASVIQHIL---SHGLELNTVTYNTLLHSLCSH-EYWDEVEEILNIMYQTSYCPTVIT 351
Query: 319 YASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTME 378
Y +++ K+ L + F QM +K PD YN V+ A++K +V +A+ LL ++
Sbjct: 352 YNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLK 411
Query: 379 KNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITP---TIRTFHAFFRILRVEE 435
P ++TYNS+I L K + +A E+++ M+ I P T R+ F + E
Sbjct: 412 NTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVE 471
Query: 436 EVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLI 495
E ++L + G TY ++I+ C+ ++++ ++ +M G D + Y ++
Sbjct: 472 EAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIV 531
Query: 496 HGLFLNGKVKEA 507
G+ G EA
Sbjct: 532 KGVEEMGMGSEA 543
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 148/344 (43%), Gaps = 16/344 (4%)
Query: 183 LGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGF 242
L ++ + D A ++ VM G P +T ++I C + A+ G
Sbjct: 149 LARIDQLDKAMCILRVMVMSGGVPDTITYN---MIIGNLCKKGHIRTALVLLEDMSLSGS 205
Query: 243 QVGIDEFQGLLSALCRYKNVQDA-----EHLLFCNKNVFPLEIKSFNIILNGWCNLIVSA 297
+ + ++ + Y N + A + L +N P + ++ +++ C SA
Sbjct: 206 PPDVITYNTVIRCMFDYGNAEQAIRFWKDQL----QNGCPPFMITYTVLVELVCRYCGSA 261
Query: 298 REAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAV 357
R E V +M+ G D+V+Y S+++ + L +V + + + + + YN +
Sbjct: 262 RAIE-VLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTL 320
Query: 358 IHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNI 417
+H+L E +L M + + P V+TYN LI LCK R + A + F M+++
Sbjct: 321 LHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKC 380
Query: 418 TPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFK 474
P I T++ + E ++ ELL ++ C P + TY +I + + + +
Sbjct: 381 LPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALE 440
Query: 475 IWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKG 518
+++ M + G+ D + LI+G V+EA E +G
Sbjct: 441 LYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRG 484
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 156/355 (43%), Gaps = 16/355 (4%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y+ +I L K TA L+E M G+ P ++T T++ + Y + +AI +
Sbjct: 177 YNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY---GNAEQAIRFWK 233
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWC-- 291
+ G + + L+ +CRY A +L + +P +I ++N ++N C
Sbjct: 234 DQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYP-DIVTYNSLVNYNCRR 292
Query: 292 -NLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPD 350
NL E V + G++ + V+Y +++ +V ++ + M P
Sbjct: 293 GNL----EEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPT 348
Query: 351 RKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFN 410
YN +I+ L K RL+ A++ M + PD+VTYN+++ + K +D+A E+
Sbjct: 349 VITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLG 408
Query: 411 DMMKRNITPTIRTFHAFFRILR---VEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWR 467
+ P + T+++ L + ++ EL +M + G +P T LI FCR
Sbjct: 409 LLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRAN 468
Query: 468 KLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
++E ++ G S+Y ++I GL +++ A + M G P+
Sbjct: 469 LVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPD 523
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 99/242 (40%), Gaps = 7/242 (2%)
Query: 307 MSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRL 366
M G D ++Y I+ K + L + M PD YN VI +
Sbjct: 165 MVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGN 224
Query: 367 VKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHA 426
++A+ + +N P ++TY L++ +C+ A EV DM P I T+++
Sbjct: 225 AEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNS 284
Query: 427 F--FRILRVE-EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDG 483
+ R EEV ++ + G TY L+ C DEV +I N+M +
Sbjct: 285 LVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTS 344
Query: 484 VSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQV 543
+Y +LI+GL + A D++ +M + LP+ T + +S EG V
Sbjct: 345 YCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMS----KEGMV 400
Query: 544 TD 545
D
Sbjct: 401 DD 402
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 88/228 (38%), Gaps = 45/228 (19%)
Query: 327 SKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDV 386
+ KL +L + M P + ++ LA+ + +A+ +L+ M + PD
Sbjct: 115 CSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDT 174
Query: 387 VTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL----RVEEEV----- 437
+TYN +I LCK I A + DM P + T++ R + E+ +
Sbjct: 175 ITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKD 234
Query: 438 -----------------------------FELLDKMRELGCYPTIETYIMLIRKFCRWRK 468
E+L+ M GCYP I TY L+ CR
Sbjct: 235 QLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGN 294
Query: 469 LDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQR 516
L+EV + + G+ + +Y L+H L +H+Y+ E++
Sbjct: 295 LEEVASVIQHILSHGLELNTVTYNTLLHSLC-------SHEYWDEVEE 335
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 147/317 (46%), Gaps = 15/317 (4%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIM-IRKYCAVRDVGRA 230
++R ++ ++ K +K + AW +++ M G P VT T+ ++K VR
Sbjct: 187 NIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEV 246
Query: 231 INTFY---AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNV-FPLEIKSFNII 286
+ K G GI ++ CR V+D + K + + FN +
Sbjct: 247 VEKMVMKEKAKPNGRTCGI-----VVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSL 301
Query: 287 LNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKK 346
+NG+ ++ + V M + ++ DV++Y+++M+ +S + + K Q+F +M
Sbjct: 302 INGFVE-VMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAG 360
Query: 347 ITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAK 406
+ PD Y+ + + + K+A LL+T+ + P+VV + ++I C N +D+A
Sbjct: 361 VKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAM 419
Query: 407 EVFNDMMKRNITPTIRTFHAF-FRILRVEE--EVFELLDKMRELGCYPTIETYIMLIRKF 463
VFN M K ++P I+TF + L V++ + E+L MR G P T+++L +
Sbjct: 420 RVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAW 479
Query: 464 CRWRKLDEVFKIWNMMR 480
DE K N ++
Sbjct: 480 RVAGLTDESNKAINALK 496
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 114/256 (44%), Gaps = 11/256 (4%)
Query: 283 FNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQM 342
FN ++N + + +A + +M + G+ +Y +++ Y + K + +L D M
Sbjct: 118 FNAVINAFSES-GNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLM 176
Query: 343 ---KNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLC-K 398
N + P+ + +N ++ A K + V+EA +++ ME+ V PD VTYN++ K
Sbjct: 177 LEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQK 236
Query: 399 NRKIDEAKEVFNDM-MKRNITPTIRT----FHAFFRILRVEEEVFELLDKMRELGCYPTI 453
+ EV M MK P RT + R RV + + +M+E+ +
Sbjct: 237 GETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDG-LRFVRRMKEMRVEANL 295
Query: 454 ETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIE 513
+ LI F D + ++ +M+E V D +Y +++ G +++A + E
Sbjct: 296 VVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKE 355
Query: 514 MQRKGFLPEPKTEQML 529
M + G P+ +L
Sbjct: 356 MVKAGVKPDAHAYSIL 371
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 112/227 (49%), Gaps = 12/227 (5%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
EA+ V+ +++ G + ++SY ++++ + + + + +++ D +NAVI
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKR--- 415
+A ++ +++AV L M++ + P TYN+LIK K + + E+ + M++
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNV 182
Query: 416 NITPTIRTFHAFFRIL---RVEEEVFELLDKMRELGCYPTIETYIML----IRKFCRWRK 468
++ P IRTF+ + + EE +E++ KM E G P TY + ++K R
Sbjct: 183 DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA 242
Query: 469 LDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQ 515
EV + +M+E + R+ IV + G G+V++ + M+
Sbjct: 243 ESEVVEKM-VMKEKAKPNGRTCGIV-VGGYCREGRVRDGLRFVRRMK 287
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 166/378 (43%), Gaps = 20/378 (5%)
Query: 165 KQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAV 224
++ G V Y+S+IS K + L + M G P + + TL+ Y +
Sbjct: 75 REAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLM---SCYFKL 131
Query: 225 RDVGRAINTFYA-FKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSF 283
G A + G GID + LL ALC+ + +A L K+ E+ ++
Sbjct: 132 GRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTY 191
Query: 284 NIILNGWCNLIVSAREAERVW--HEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQ 341
NI++NG C S R W E+ K G + V+Y +++ Y K+ ++ K QLF +
Sbjct: 192 NILINGLCK---SRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLK 248
Query: 342 MKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNV-TPDVVTYNSLIKPLCKNR 400
MK + T D AV+ AL K +EA + + ++ + D+V+YN+L+ K+
Sbjct: 249 MKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDG 308
Query: 401 KIDEAKEVFNDMMKRNITPTIRTFHAFFR-ILRVEEE--VFELLDKMRELGCYPTIETYI 457
+D ++ ++ + + P T +L + + L + E+G P++ T
Sbjct: 309 NLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCN 368
Query: 458 MLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRK 517
LI C+ +D +++ M D +Y ++H L +G++ A + K
Sbjct: 369 CLIDGLCKAGHVDRAMRLFASME----VRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNK 424
Query: 518 GFLPEPKTEQMLQAWLSG 535
G + P + + +A LSG
Sbjct: 425 G-MKIPSSAR--RAVLSG 439
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 125/283 (44%), Gaps = 42/283 (14%)
Query: 276 FP-LEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYK 334
FP + K NI +N C + AE + + + G+ DV++Y +++ Y++ + +
Sbjct: 8 FPGISTKLLNISVNSLCKF-RNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDE 66
Query: 335 VFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIK 394
+ + +M+ I PD YN++I AK ++ + L M + ++PD+ +YN+L+
Sbjct: 67 AYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMS 126
Query: 395 ------------------------------------PLCKNRKIDEAKEVFNDMMKRNIT 418
LCK+ D A E+F + R +
Sbjct: 127 CYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VK 185
Query: 419 PTIRTFHAFFRILRVEEEVFELLDKMREL---GCYPTIETYIMLIRKFCRWRKLDEVFKI 475
P + T++ L V + MREL G P TY +++ + + +++++ ++
Sbjct: 186 PELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQL 245
Query: 476 WNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKG 518
+ M+++G + D + ++ L G+ +EA++ E+ R G
Sbjct: 246 FLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSG 288
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/365 (20%), Positives = 149/365 (40%), Gaps = 49/365 (13%)
Query: 209 VTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHL 268
++ + L I + C R++ RA R G + + L+ R+ + +A +
Sbjct: 11 ISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAV 70
Query: 269 L--FCNKNVFPLEIKSFNIILNGWC-NLIVSAREAERVWHEMSKRGIQHDVVSYASIMSC 325
+ P ++ ++N +++G NL+++ +++ EM G+ D+ SY ++MSC
Sbjct: 71 TRRMREAGIEP-DVTTYNSLISGAAKNLMLN--RVLQLFDEMLHSGLSPDMWSYNTLMSC 127
Query: 326 Y------------------------------------SKSSKLYKVFQLFDQMKNKKITP 349
Y KS +LF +K++ + P
Sbjct: 128 YFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKP 186
Query: 350 DRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVF 409
+ YN +I+ L K R V +++ ++K+ TP+ VTY +++K K ++I++ ++F
Sbjct: 187 ELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLF 246
Query: 410 NDMMKRNIT----PTIRTFHAFFRILRVEEEVFELLDKMRELGCYPT-IETYIMLIRKFC 464
M K T A + R EE +E + ++ G I +Y L+ +
Sbjct: 247 LKMKKEGYTFDGFANCAVVSALIKTGRA-EEAYECMHELVRSGTRSQDIVSYNTLLNLYF 305
Query: 465 RWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPK 524
+ LD V + + G+ D ++ ++++GL G A + + G P
Sbjct: 306 KDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVV 365
Query: 525 TEQML 529
T L
Sbjct: 366 TCNCL 370
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 109/265 (41%), Gaps = 29/265 (10%)
Query: 163 AGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQ--TLLIMIRK 220
AG PG + Y+ ++ L K D A L + ++ S V P+ T I+I
Sbjct: 148 AGLVPG----IDTYNILLDALCKSGHTDNAIELFKHLK------SRVKPELMTYNILING 197
Query: 221 YCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEI 280
C R VG K+ G+ + +L + K ++ L L++
Sbjct: 198 LCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLF--------LKM 249
Query: 281 KSFNIILNGWCNLIV--------SAREAERVWHEMSKRGIQ-HDVVSYASIMSCYSKSSK 331
K +G+ N V A EA HE+ + G + D+VSY ++++ Y K
Sbjct: 250 KKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGN 309
Query: 332 LYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNS 391
L V L ++++ K + PD + +++ L A L + + + P VVT N
Sbjct: 310 LDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNC 369
Query: 392 LIKPLCKNRKIDEAKEVFNDMMKRN 416
LI LCK +D A +F M R+
Sbjct: 370 LIDGLCKAGHVDRAMRLFASMEVRD 394
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 157/362 (43%), Gaps = 25/362 (6%)
Query: 166 QPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVR 225
Q G A + Y ++ K R D A L++ + G P+LV+ LL +C
Sbjct: 204 QKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLT---GFCKEG 260
Query: 226 DVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSF 283
A+ F GF+ + + LL LC ++A LL + P + ++
Sbjct: 261 RTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAP-SVVTY 319
Query: 284 NIILNGWCNLIVSAR--EAERVWHEMSKRGIQHDVV--SYASIMSCYSKSSKLYKVFQLF 339
NI++N +L R +A +V EMSK Q V SY +++ K K+ V +
Sbjct: 320 NILIN---SLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCL 376
Query: 340 DQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKN 399
D+M ++ P+ YNA+ V+EA ++Q++ Y S+I LC+
Sbjct: 377 DEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRK 436
Query: 400 RKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMREL-GCYPTIET 455
A ++ +M + P T+ A R L +E E+L M E C PT++
Sbjct: 437 GNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDN 496
Query: 456 YIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQ 515
+ +I C+ R+ D +++ MM E + ++Y +L+ G+ AH+ +E+
Sbjct: 497 FNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGI--------AHEDELELA 548
Query: 516 RK 517
++
Sbjct: 549 KE 550
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 104/216 (48%), Gaps = 3/216 (1%)
Query: 328 KSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVV 387
K+++L K ++ + M + I PD Y +++ L K V A+ L++ ME + + V
Sbjct: 118 KANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTV 177
Query: 388 TYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL---RVEEEVFELLDKM 444
TYN+L++ LC ++++ + +M++ + P T+ R +E +LLD++
Sbjct: 178 TYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEI 237
Query: 445 RELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKV 504
G P + +Y +L+ FC+ + D+ ++ + G + SY +L+ L +G+
Sbjct: 238 IVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRW 297
Query: 505 KEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTE 540
+EA+ EM P T +L L+ TE
Sbjct: 298 EEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTE 333
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 104/233 (44%), Gaps = 7/233 (3%)
Query: 252 LLSALCRYKNVQDAEHL--LFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSK 309
LL LC+ ++ A + L + + P + ++ ++N C + A ++ +M
Sbjct: 112 LLYDLCKANRLKKAIRVIELMVSSGIIP-DASAYTYLVNQLCKR-GNVGYAMQLVEKMED 169
Query: 310 RGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKE 369
G + V+Y +++ L + Q +++ K + P+ Y+ ++ A K R E
Sbjct: 170 HGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDE 229
Query: 370 AVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFR 429
AV LL + P++V+YN L+ CK + D+A +F ++ + + +++ R
Sbjct: 230 AVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLR 289
Query: 430 ILRVE---EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMM 479
L + EE LL +M P++ TY +LI + ++ ++ M
Sbjct: 290 CLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEM 342
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 142/339 (41%), Gaps = 46/339 (13%)
Query: 217 MIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKN-VQDAEHLL--FCNK 273
M++ +CA G + F F R F + + L ++LC K+ + A+ LL
Sbjct: 538 MVKGFCAA---GCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKL 594
Query: 274 NVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLY 333
V P E + ++ WC + + R+A + + + I D+ +Y +++ Y + ++
Sbjct: 595 GVEP-EKSMYGKLIGAWCR-VNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPK 652
Query: 334 KVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLI 393
+ + LF+ MK + + PD Y+ ++++ +++ + ME +V PDVV Y +I
Sbjct: 653 QAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMI 705
Query: 394 KPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFR------------ILRVEEEVF--- 438
C + + +F DM +R I P + T+ + V+ +VF
Sbjct: 706 NRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYT 765
Query: 439 ----------------ELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMRED 482
+ D+M E G P Y LI C+ L E I++ M E
Sbjct: 766 VLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIES 825
Query: 483 GVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
GV D Y LI G NG V +A EM KG P
Sbjct: 826 GVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKP 864
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 136/314 (43%), Gaps = 36/314 (11%)
Query: 250 QGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEM 307
+L C+ N +A L F N+ L+ +N+ + L EA ++ EM
Sbjct: 365 SSILQCYCQMGNFSEAYDLFKEFRETNI-SLDRVCYNVAFDALGKL-GKVEEAIELFREM 422
Query: 308 SKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLV 367
+ +GI DV++Y +++ K F L +M TPD +YN + LA L
Sbjct: 423 TGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLA 482
Query: 368 KEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDM---MKRNITPTIRTF 424
+EA L+ ME V P VT+N +I+ L ++D+A+ + + + N ++ F
Sbjct: 483 QEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGF 542
Query: 425 -------HAFFRILRVE----------------------EEVFELLDKMRELGCYPTIET 455
HAF R +R+E + +LLD+M +LG P
Sbjct: 543 CAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSM 602
Query: 456 YIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQ 515
Y LI +CR + + + + ++ + D +Y ++I+ + K+A+ + +M+
Sbjct: 603 YGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMK 662
Query: 516 RKGFLPEPKTEQML 529
R+ P+ T +L
Sbjct: 663 RRDVKPDVVTYSVL 676
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 128/281 (45%), Gaps = 13/281 (4%)
Query: 249 FQGLLSALCRYKNVQDAEHLLF-CNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEM 307
++ ++ LC ++DAE ++ K+ ++ ++ I+ G ++ +A V+++M
Sbjct: 294 YRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGH-RKNMNIPKAVDVFNKM 352
Query: 308 SKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLV 367
K+ + + V +SI+ CY + + + LF + + I+ DR YN AL K V
Sbjct: 353 LKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKV 412
Query: 368 KEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAF 427
+EA+ L + M + PDV+ Y +LI C K +A ++ +M TP I ++
Sbjct: 413 EEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVL 472
Query: 428 FRILR---VEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGV 484
L + +E FE L M G PT T+ M+I +LD+ + +
Sbjct: 473 AGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSR 532
Query: 485 SHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT 525
+D S ++ G G + A + +I ++ P PK+
Sbjct: 533 ENDAS----MVKGFCAAGCLDHAFERFIRLE----FPLPKS 565
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 131/303 (43%), Gaps = 43/303 (14%)
Query: 222 CAVRD-VGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHL--LFCNKNVFPL 278
CA +D + +A + + G + + L+ A CR NV+ A + K + P
Sbjct: 575 CAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVP- 633
Query: 279 EIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSC------------- 325
++ ++ I++N +C L ++A ++ +M +R ++ DVV+Y+ +++
Sbjct: 634 DLFTYTIMINTYCRL-NEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAF 692
Query: 326 ---------------YSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEA 370
Y + L KV+ LF MK ++I PD Y ++ K
Sbjct: 693 DVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN-------KPE 745
Query: 371 VNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRI 430
NL + M+ +V PDV Y LI CK + EAK +F+ M++ + P + A
Sbjct: 746 RNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIAC 805
Query: 431 ---LRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHD 487
+ +E + D+M E G P + Y LI CR + + K+ M E G+
Sbjct: 806 CCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPT 865
Query: 488 RSS 490
++S
Sbjct: 866 KAS 868
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 124/325 (38%), Gaps = 33/325 (10%)
Query: 276 FPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKV 335
FPL + + C +A+ + M K G++ + Y ++ + + + + K
Sbjct: 560 FPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKA 619
Query: 336 FQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSL--- 392
+ F+ + KKI PD Y +I+ + K+A L + M++ +V PDVVTY+ L
Sbjct: 620 REFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS 679
Query: 393 -------------------------IKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAF 427
I C + + +F DM +R I P + T+
Sbjct: 680 DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVL 739
Query: 428 FRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHD 487
+ + L +M+ P + Y +LI C+ L E +I++ M E GV D
Sbjct: 740 LK----NKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPD 795
Query: 488 RSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDLE 547
+ Y LI G +KEA + M G P+ L A R G + L
Sbjct: 796 AAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCC-RNGFVLKAVKLV 854
Query: 548 HNQLEDDTVEKKVKATPSKFDKEKA 572
LE K + + K KA
Sbjct: 855 KEMLEKGIKPTKASLSAVHYAKLKA 879
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 117/281 (41%), Gaps = 42/281 (14%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y +I ++ A E++ P L T IMI YC + + +A F
Sbjct: 603 YGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFT---YTIMINTYCRLNEPKQAYALFE 659
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIILNGWCNLIV 295
KR + + + LL++ ++ E +V P ++ + I++N +C+L
Sbjct: 660 DMKRRDVKPDVVTYSVLLNSDPELDMKREMEAF-----DVIP-DVVYYTIMINRYCHL-N 712
Query: 296 SAREAERVWHEMSKRGIQHDVVSYASIM------------------------------SC 325
++ ++ +M +R I DVV+Y ++ C
Sbjct: 713 DLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQC 772
Query: 326 YSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPD 385
K L + ++FDQM + PD Y A+I K +KEA + M ++ V PD
Sbjct: 773 --KIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPD 830
Query: 386 VVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHA 426
VV Y +LI C+N + +A ++ +M+++ I PT + A
Sbjct: 831 VVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSA 871
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 167/421 (39%), Gaps = 58/421 (13%)
Query: 150 RNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWN----LIEVMRG---- 201
++D A TFF W G +V Y ++ IL +KF A LIE+
Sbjct: 90 QSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEV 149
Query: 202 -------GGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLS 254
T P ++++ Y + V F GF V + LL+
Sbjct: 150 DVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLN 209
Query: 255 ALCRYKNVQDAEHL--LFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGI 312
L + ++D + + C + P +FNI+ N +CN + RE + +M + G
Sbjct: 210 GLLKLDLMEDCWQVYSVMCRVGIHP-NTYTFNILTNVFCN-DSNFREVDDFLEKMEEEGF 267
Query: 313 QHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVN 372
+ D+V+Y +++S Y + +L + F L+ M +++ PD Y ++I L K V+EA
Sbjct: 268 EPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQ 327
Query: 373 LLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITP-------TIRTFH 425
M + PD ++YN+LI CK + ++K++ ++M+ ++ P + F
Sbjct: 328 TFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFV 387
Query: 426 AFFRILRVEEEVFE-------------------------------LLDK-MRELGCYPTI 453
R+L V E LLD+ + E G
Sbjct: 388 REGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKP 447
Query: 454 ETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIE 513
ETY LI R ++E + ++ D +Y LI L G+ +EA E
Sbjct: 448 ETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAE 507
Query: 514 M 514
M
Sbjct: 508 M 508
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 115/238 (48%), Gaps = 6/238 (2%)
Query: 283 FNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQM 342
F++++ G+ L + E RV+ E+ G VV+ +++ K + +Q++ M
Sbjct: 169 FDMLVKGYLKLGL-VEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVM 227
Query: 343 KNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKI 402
I P+ +N + + +E + L+ ME+ PD+VTYN+L+ C+ ++
Sbjct: 228 CRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRL 287
Query: 403 DEAKEVFNDMMKRNITPTIRTFHAFFRIL----RVEEEVFELLDKMRELGCYPTIETYIM 458
EA ++ M +R + P + T+ + + L RV E + +M + G P +Y
Sbjct: 288 KEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRV-REAHQTFHRMVDRGIKPDCMSYNT 346
Query: 459 LIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQR 516
LI +C+ + + K+ + M + V DR + V++ G G++ A ++ +E++R
Sbjct: 347 LIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRR 404
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 113/252 (44%), Gaps = 10/252 (3%)
Query: 350 DRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVF 409
D V++ ++ K LV+E + + + + + VVT N L+ L K +++ +V+
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 410 NDMMKRNITPTIRTFHAFFRILRVEE---EVFELLDKMRELGCYPTIETYIMLIRKFCRW 466
+ M + I P TF+ + + EV + L+KM E G P + TY L+ +CR
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 467 RKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTE 526
+L E F ++ +M V D +Y LI GL +G+V+EAH + M +G P+ +
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 344
Query: 527 QMLQAWLSGRQGTEGQVTDLEHNQLEDDTVEKK--VKATPSKFDKEKAFLRE----PETR 580
L + ++G Q L H L + V + K F +E L E R
Sbjct: 345 NTL-IYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELR 403
Query: 581 RVTRDRGFSFWD 592
R+ D F D
Sbjct: 404 RLKVDIPFEVCD 415
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 152/387 (39%), Gaps = 67/387 (17%)
Query: 160 FLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIR 219
FL ++ G+ + Y++++S + + A+ L ++M P LVT +L I+
Sbjct: 258 FLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSL---IK 314
Query: 220 KYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFP 277
C V A TF+ G + + L+ A C+ +Q ++ LL +V P
Sbjct: 315 GLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVP 374
Query: 278 LEIKSFNIILNGWC---------NLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSK 328
+ +I+ G+ N +V R K I +V + + C +
Sbjct: 375 DRF-TCKVIVEGFVREGRLLSAVNFVVELRRL--------KVDIPFEVCDFLIVSLC--Q 423
Query: 329 SSKLYKVFQLFDQM---KNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPD 385
K + L D++ + + P+ YN +I +L++ ++EA+ L ++ N D
Sbjct: 424 EGKPFAAKHLLDRIIEEEGHEAKPE--TYNNLIESLSRCDAIEEALVLKGKLKNQNQVLD 481
Query: 386 VVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMR 445
TY +LI LC+ + EA+ + +M + P
Sbjct: 482 AKTYRALIGCLCRIGRNREAESLMAEMFDSEVKP-------------------------- 515
Query: 446 ELGCYPTIETYIM--LIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNG- 502
+++I L+ +C+ D+ ++ ++ + D SY L+ + G
Sbjct: 516 --------DSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGC 567
Query: 503 KVKEAHDYYIEMQRKGFLPEPKTEQML 529
K+A + MQR GF+P T + L
Sbjct: 568 GYKKALELQERMQRLGFVPNRLTCKYL 594
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 135/302 (44%), Gaps = 37/302 (12%)
Query: 276 FPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKV 335
F L++ + +++ +C + + EA +M +G++ + V + I+ CY K +
Sbjct: 314 FGLDVYACLAVIDRYCKNM-NLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEA 372
Query: 336 FQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKP 395
+ F + ++ I DR YN AL+K V+EA LLQ M+ + PDV+ Y +LI
Sbjct: 373 LEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDG 432
Query: 396 LCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRV---EEEVFELLDKMRELGCYPT 452
C K+ +A ++ ++M+ ++P + T++ L EEEV E+ ++M+ G P
Sbjct: 433 YCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPN 492
Query: 453 IETYIMLIRKFCRWRKLDEVFKIWNMMR---------------EDGVSHD---------- 487
T ++I C RK+ E ++ + E G+S
Sbjct: 493 AVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEY 552
Query: 488 ---RSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPK---TEQMLQAWLSGRQGTEG 541
+S YI L L + G +++AHD +M + EP +M+ A+ E
Sbjct: 553 PLRKSVYIKLFFSLCIEGYLEKAHDVLKKMS--AYRVEPGRSMCGKMIGAFCKLNNVREA 610
Query: 542 QV 543
QV
Sbjct: 611 QV 612
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 161/397 (40%), Gaps = 33/397 (8%)
Query: 154 EAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQT 213
E AF L K G V Y ++I K A +LI+ M G G P L+T
Sbjct: 405 EEAFEL-LQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNV 463
Query: 214 LLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNK 273
L+ + + +V + + K G + ++ LC + V++AE +
Sbjct: 464 LVSGLARNGHEEEV---LEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLE 520
Query: 274 NVFPLEIKSFNIILNGWCNLIVSAREAE---RVWHEMSKRGIQHDVVSYASIMSCYSKSS 330
P SF + G+C +S + + R+ + + K Y +
Sbjct: 521 QKCPENKASF---VKGYCEAGLSKKAYKAFVRLEYPLRKS-------VYIKLFFSLCIEG 570
Query: 331 KLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYN 390
L K + +M ++ P R + +I A K V+EA L TM + + PD+ TY
Sbjct: 571 YLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYT 630
Query: 391 SLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFF-RILRVEEE------------- 436
+I C+ ++ +A+ +F DM +R I P + T+ R L+++ E
Sbjct: 631 IMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGK 690
Query: 437 --VFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVL 494
E+L + G + Y +LI + C+ L++ ++++ M + G+ D +Y L
Sbjct: 691 RKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTL 750
Query: 495 IHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQA 531
I F G + A E+ +K +P E +++
Sbjct: 751 ISSYFRKGYIDMAVTLVTELSKKYNIPSESFEAAVKS 787
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 132/309 (42%), Gaps = 12/309 (3%)
Query: 227 VGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNII 286
+G + F K+ G + ++ ALCR N+++A LL N++VF +
Sbjct: 197 IGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENESVF-----GYKTF 251
Query: 287 LNGWCNLIVSAREAERVWHEMSKRGIQHDVVS--YASIMSCYSKSSKLYKVFQLFDQMKN 344
+NG C + + + + ++ + D + ++ + K+ + +M+
Sbjct: 252 INGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEE 311
Query: 345 KKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDE 404
D AVI K + EA+ L M + + V + +++ CK E
Sbjct: 312 IGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLE 371
Query: 405 AKEVFNDMMKRNI----TPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLI 460
A E F + NI F A ++ RVEE FELL +M++ G P + Y LI
Sbjct: 372 ALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEE-AFELLQEMKDRGIVPDVINYTTLI 430
Query: 461 RKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFL 520
+C K+ + + + M +G+S D +Y VL+ GL NG +E + Y M+ +G
Sbjct: 431 DGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPK 490
Query: 521 PEPKTEQML 529
P T ++
Sbjct: 491 PNAVTNSVI 499
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 158/345 (45%), Gaps = 29/345 (8%)
Query: 159 FFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMI 218
FF W+ K G + +E++ ++ +L + + L+ +R + QT I+
Sbjct: 89 FFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQILLSDLRKENRA---MDKQTFSIVA 145
Query: 219 RKYCAVRDVGRAINTFYAFKRF-----GFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNK 273
V AI F +F GF V ++SALC +V+ A ++ +K
Sbjct: 146 ETLVKVGKEEDAIGIFKILDKFSCPQDGFTV-----TAIISALCSRGHVKRALGVMHHHK 200
Query: 274 NVFPL-EIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSK---- 328
+V E+ + +L GW ++ + +EA RV +M GI D+ + S+++C +
Sbjct: 201 DVISGNELSVYRSLLFGW-SVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVN 259
Query: 329 ---SSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPD 385
S + + + +M++ KI P YN ++ L + R V+E+ +L+ M+++ PD
Sbjct: 260 RNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPD 319
Query: 386 VVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEV---FELLD 442
+Y +++ L + + ++ ++M++R P + ++ +L E V +L +
Sbjct: 320 TGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFE 379
Query: 443 KMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHD 487
KM+ + Y +LI K C+ ++ ++W E+ +S D
Sbjct: 380 KMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELW----EEALSID 420
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 13/211 (6%)
Query: 335 VFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIK 394
+F++ D+ + D A+I AL VK A+ ++ + ++ Y SL+
Sbjct: 160 IFKILDKFSCPQ---DGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLF 216
Query: 395 PLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL----------RVEEEVFELLDKM 444
R + EA+ V DM ITP + F++ L + E ++ +M
Sbjct: 217 GWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEM 276
Query: 445 RELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKV 504
R PT +Y +L+ R R++ E +I M+ G D SY ++ L+L G+
Sbjct: 277 RSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRF 336
Query: 505 KEAHDYYIEMQRKGFLPEPKTEQMLQAWLSG 535
+ + EM +GF PE K L L G
Sbjct: 337 GKGNQIVDEMIERGFRPERKFYYDLIGVLCG 367
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 91/202 (45%), Gaps = 9/202 (4%)
Query: 225 RDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFN 284
R+V A K G + F LL+ LC ++ L+ N+ LE++S+
Sbjct: 222 RNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIM-LEMRSYK 280
Query: 285 IILNGWC-NLIVSA-------REAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVF 336
I N+++S RE+ ++ +M + G D SY ++ + + K
Sbjct: 281 IQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGN 340
Query: 337 QLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPL 396
Q+ D+M + P+RK Y +I L V A+ L + M++++V Y+ LI L
Sbjct: 341 QIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKL 400
Query: 397 CKNRKIDEAKEVFNDMMKRNIT 418
CK ++ +E++ + + ++T
Sbjct: 401 CKGGNFEKGRELWEEALSIDVT 422
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 134/290 (46%), Gaps = 10/290 (3%)
Query: 258 RYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEM-SKRGIQH 314
+ N+ DA+ L + PL++K N +L + ++ V + H + S+ +
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 315 DVVSYASIMS--CYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVN 372
++ ++S C + S + V ++ + M N + PD+ + + +L + V EA +
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKD 180
Query: 373 LLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKR-NITPTIRTFHAFFRIL 431
L++ + + + PD TYN L+K LCK + + E ++M ++ P + +F +
Sbjct: 181 LMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNV 240
Query: 432 ---RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDR 488
+ E L+ K+ G P Y +++ FC K E ++ M+E+GV D+
Sbjct: 241 CNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQ 300
Query: 489 SSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQG 538
+Y LI GL G+V+EA Y M G+ P+ T L + R+G
Sbjct: 301 ITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC-RKG 349
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 15/231 (6%)
Query: 170 AHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGR 229
+H+ R S IS ++ +M G P VT I +R C V
Sbjct: 130 SHACRAPDSSIS---------NVHRVLNLMVNNGLEPDQVTTD---IAVRSLCETGRVDE 177
Query: 230 AINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPL--EIKSFNIIL 287
A + + LL LC+ K++ + ++ F + ++ SF I++
Sbjct: 178 AKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILI 237
Query: 288 NGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKI 347
+ CN + REA + ++ G + D Y +IM + SK + ++ +MK + +
Sbjct: 238 DNVCN-SKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGV 296
Query: 348 TPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCK 398
PD+ YN +I L+K V+EA L+TM PD TY SL+ +C+
Sbjct: 297 EPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 14/234 (5%)
Query: 242 FQVGIDEFQGLLSALCR-----YKNVQDAEHLLFCNKNVFPLEIKSFNIILNGWCNLIVS 296
F+ G F LLS CR NV +L+ N + P ++ + +I + C
Sbjct: 118 FRPGRSTFLILLSHACRAPDSSISNVHRVLNLMV-NNGLEPDQVTT-DIAVRSLCE-TGR 174
Query: 297 AREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNK-KITPDRKVYN 355
EA+ + E++++ D +Y ++ K L+ V++ D+M++ + PD +
Sbjct: 175 VDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFT 234
Query: 356 AVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKR 415
+I + + ++EA+ L+ + PD YN+++K C K EA V+ M +
Sbjct: 235 ILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEE 294
Query: 416 NITPTIRTFHAFF----RILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCR 465
+ P T++ + RVEE L M + G P TY L+ CR
Sbjct: 295 GVEPDQITYNTLIFGLSKAGRVEEARM-YLKTMVDAGYEPDTATYTSLMNGMCR 347
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 162/353 (45%), Gaps = 16/353 (4%)
Query: 154 EAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQT 213
+ A +FF K G SV ++ +I+ L + A L M G P VT
Sbjct: 239 DMAKSFFCTVLK-CGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYN- 296
Query: 214 LLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNK 273
I+ + + + + A G + + LL C+ N+ D +L +
Sbjct: 297 --ILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNI-DMGLVLLKDM 353
Query: 274 NVFPLEIKSF---NIILNGWCNLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCYSK 328
E+ S +++L+G C + R EA ++++M G+ D+V+Y+ ++ K
Sbjct: 354 LSRGFELNSIIPCSVMLSGLCK---TGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCK 410
Query: 329 SSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVT 388
K L+D+M +K+I P+ + + A++ L + ++ EA +LL ++ + T D+V
Sbjct: 411 LGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVL 470
Query: 389 YNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFE---LLDKMR 445
YN +I K+ I+EA E+F +++ ITP++ TF++ + + E +LD ++
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Query: 446 ELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGL 498
G P++ +Y L+ + + ++ M+ +G+ +Y V+ GL
Sbjct: 531 LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGL 583
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 157/372 (42%), Gaps = 31/372 (8%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G + V Y ++ ++ D L++ M G + + P + +M+ C +
Sbjct: 322 GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS--VMLSGLCKTGRI 379
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNI 285
A++ F K G + + ++ LC+ A L C+K + P ++
Sbjct: 380 DEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILP-NSRTHGA 438
Query: 286 ILNGWC--NLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMK 343
+L G C +++ AR + + G D+V Y ++ Y+KS + + +LF +
Sbjct: 439 LLLGLCQKGMLLEARS---LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVI 495
Query: 344 NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPL--CKNRK 401
ITP +N++I+ K + + EA +L ++ + P VV+Y +L+ C N K
Sbjct: 496 ETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTK 555
Query: 402 -IDEAKEVFNDMMKRNITPTIRTFHAFFRIL---------------RVEEEVFELLDKMR 445
IDE + +M I PT T+ F+ L R+ E+ + L M
Sbjct: 556 SIDELRR---EMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDME 612
Query: 446 ELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVK 505
G P TY +I+ CR + L F +M+ + ++Y +LI L + G ++
Sbjct: 613 SEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIR 672
Query: 506 EAHDYYIEMQRK 517
+A + +Q +
Sbjct: 673 KADSFIYSLQEQ 684
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 103/225 (45%), Gaps = 6/225 (2%)
Query: 310 RGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKE 369
+ I VVS+ SIMS Y K + F + + P +N +I+ L + E
Sbjct: 216 KDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAE 275
Query: 370 AVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFF- 428
A+ L M K+ V PD VTYN L K I A EV DM+ + ++P + T+
Sbjct: 276 ALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLC 335
Query: 429 ---RILRVEEEVFELLDKM-RELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGV 484
++ ++ + L D + R I +ML C+ ++DE ++N M+ DG+
Sbjct: 336 GQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVML-SGLCKTGRIDEALSLFNQMKADGL 394
Query: 485 SHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
S D +Y ++IHGL GK A Y EM K LP +T L
Sbjct: 395 SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGAL 439
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 165/394 (41%), Gaps = 44/394 (11%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y +++ L + +K + A + GPS+V+ +++ YC + V A + F
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIM---SGYCKLGFVDMAKSFFC 246
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF-CNKNVFPLEIKSFNIILNGWCNLI 294
+ G + L++ LC ++ +A L NK+ + ++NI+ G+ +L+
Sbjct: 247 TVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGF-HLL 305
Query: 295 VSAREAERVWHEMSKRGIQHDVVSYA------------------------------SIMS 324
A V +M +G+ DV++Y SI+
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 325 C------YSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTME 378
C K+ ++ + LF+QMK ++PD Y+ VIH L K A+ L M
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425
Query: 379 KNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAF---FRILRVEE 435
+ P+ T+ +L+ LC+ + EA+ + + ++ T I ++ + E
Sbjct: 426 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485
Query: 436 EVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLI 495
E EL + E G P++ T+ LI +C+ + + E KI ++++ G++ SY L+
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
Query: 496 HGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
G K + EM+ +G P T ++
Sbjct: 546 DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 579
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 106/220 (48%), Gaps = 10/220 (4%)
Query: 303 VWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALA 362
+ +M + + SY S++ + ++ K++ V++ ++K+K + Y+ V+ L
Sbjct: 146 ILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYK---EIKDK----NEHTYSTVVDGLC 198
Query: 363 KGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIR 422
+ + +++AV L+T E ++ P VV++NS++ CK +D AK F ++K + P++
Sbjct: 199 RQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVY 258
Query: 423 TFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMM 479
+ + L + E EL M + G P TY +L + F + +++ M
Sbjct: 259 SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDM 318
Query: 480 REDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGF 519
+ G+S D +Y +L+ G G + +M +GF
Sbjct: 319 LDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF 358
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 111/263 (42%), Gaps = 15/263 (5%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y+ +I K + A L +V+ G PS+ T +L I YC +++ A
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSL---IYGYCKTQNIAEARKILD 527
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKS---FNIILNGW 290
K +G + + L+ A N + + L + + P + F + GW
Sbjct: 528 VIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGW 587
Query: 291 ----CNLIVSAREAERV---WHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMK 343
CN ++ R E+ +M GI D ++Y +I+ + L F + MK
Sbjct: 588 KHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMK 647
Query: 344 NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKID 403
++ + YN +I +L +++A + + ++++ NV+ Y +LIK C +
Sbjct: 648 SRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPE 707
Query: 404 EAKEVFNDMMKRNITPTIRTFHA 426
A ++F+ ++ R +IR + A
Sbjct: 708 MAVKLFHQLLHRGFNVSIRDYSA 730
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 162/353 (45%), Gaps = 16/353 (4%)
Query: 154 EAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQT 213
+ A +FF K G SV ++ +I+ L + A L M G P VT
Sbjct: 239 DMAKSFFCTVLK-CGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYN- 296
Query: 214 LLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNK 273
I+ + + + + A G + + LL C+ N+ D +L +
Sbjct: 297 --ILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNI-DMGLVLLKDM 353
Query: 274 NVFPLEIKSF---NIILNGWCNLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCYSK 328
E+ S +++L+G C + R EA ++++M G+ D+V+Y+ ++ K
Sbjct: 354 LSRGFELNSIIPCSVMLSGLCK---TGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCK 410
Query: 329 SSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVT 388
K L+D+M +K+I P+ + + A++ L + ++ EA +LL ++ + T D+V
Sbjct: 411 LGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVL 470
Query: 389 YNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFE---LLDKMR 445
YN +I K+ I+EA E+F +++ ITP++ TF++ + + E +LD ++
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Query: 446 ELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGL 498
G P++ +Y L+ + + ++ M+ +G+ +Y V+ GL
Sbjct: 531 LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGL 583
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 157/372 (42%), Gaps = 31/372 (8%)
Query: 168 GYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
G + V Y ++ ++ D L++ M G + + P + +M+ C +
Sbjct: 322 GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS--VMLSGLCKTGRI 379
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNI 285
A++ F K G + + ++ LC+ A L C+K + P ++
Sbjct: 380 DEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILP-NSRTHGA 438
Query: 286 ILNGWC--NLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMK 343
+L G C +++ AR + + G D+V Y ++ Y+KS + + +LF +
Sbjct: 439 LLLGLCQKGMLLEARS---LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVI 495
Query: 344 NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPL--CKNRK 401
ITP +N++I+ K + + EA +L ++ + P VV+Y +L+ C N K
Sbjct: 496 ETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTK 555
Query: 402 -IDEAKEVFNDMMKRNITPTIRTFHAFFRIL---------------RVEEEVFELLDKMR 445
IDE + +M I PT T+ F+ L R+ E+ + L M
Sbjct: 556 SIDELRR---EMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDME 612
Query: 446 ELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVK 505
G P TY +I+ CR + L F +M+ + ++Y +LI L + G ++
Sbjct: 613 SEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIR 672
Query: 506 EAHDYYIEMQRK 517
+A + +Q +
Sbjct: 673 KADSFIYSLQEQ 684
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 103/225 (45%), Gaps = 6/225 (2%)
Query: 310 RGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKE 369
+ I VVS+ SIMS Y K + F + + P +N +I+ L + E
Sbjct: 216 KDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAE 275
Query: 370 AVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFF- 428
A+ L M K+ V PD VTYN L K I A EV DM+ + ++P + T+
Sbjct: 276 ALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLC 335
Query: 429 ---RILRVEEEVFELLDKM-RELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGV 484
++ ++ + L D + R I +ML C+ ++DE ++N M+ DG+
Sbjct: 336 GQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVML-SGLCKTGRIDEALSLFNQMKADGL 394
Query: 485 SHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
S D +Y ++IHGL GK A Y EM K LP +T L
Sbjct: 395 SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGAL 439
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 165/394 (41%), Gaps = 44/394 (11%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y +++ L + +K + A + GPS+V+ +++ YC + V A + F
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIM---SGYCKLGFVDMAKSFFC 246
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF-CNKNVFPLEIKSFNIILNGWCNLI 294
+ G + L++ LC ++ +A L NK+ + ++NI+ G+ +L+
Sbjct: 247 TVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGF-HLL 305
Query: 295 VSAREAERVWHEMSKRGIQHDVVSYA------------------------------SIMS 324
A V +M +G+ DV++Y SI+
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 325 C------YSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTME 378
C K+ ++ + LF+QMK ++PD Y+ VIH L K A+ L M
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425
Query: 379 KNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAF---FRILRVEE 435
+ P+ T+ +L+ LC+ + EA+ + + ++ T I ++ + E
Sbjct: 426 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485
Query: 436 EVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLI 495
E EL + E G P++ T+ LI +C+ + + E KI ++++ G++ SY L+
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
Query: 496 HGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
G K + EM+ +G P T ++
Sbjct: 546 DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 579
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 106/220 (48%), Gaps = 10/220 (4%)
Query: 303 VWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALA 362
+ +M + + SY S++ + ++ K++ V++ ++K+K + Y+ V+ L
Sbjct: 146 ILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYK---EIKDK----NEHTYSTVVDGLC 198
Query: 363 KGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIR 422
+ + +++AV L+T E ++ P VV++NS++ CK +D AK F ++K + P++
Sbjct: 199 RQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVY 258
Query: 423 TFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMM 479
+ + L + E EL M + G P TY +L + F + +++ M
Sbjct: 259 SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDM 318
Query: 480 REDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGF 519
+ G+S D +Y +L+ G G + +M +GF
Sbjct: 319 LDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF 358
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 111/263 (42%), Gaps = 15/263 (5%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y+ +I K + A L +V+ G PS+ T +L I YC +++ A
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSL---IYGYCKTQNIAEARKILD 527
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKS---FNIILNGW 290
K +G + + L+ A N + + L + + P + F + GW
Sbjct: 528 VIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGW 587
Query: 291 ----CNLIVSAREAERV---WHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMK 343
CN ++ R E+ +M GI D ++Y +I+ + L F + MK
Sbjct: 588 KHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMK 647
Query: 344 NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKID 403
++ + YN +I +L +++A + + ++++ NV+ Y +LIK C +
Sbjct: 648 SRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPE 707
Query: 404 EAKEVFNDMMKRNITPTIRTFHA 426
A ++F+ ++ R +IR + A
Sbjct: 708 MAVKLFHQLLHRGFNVSIRDYSA 730
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 150/346 (43%), Gaps = 53/346 (15%)
Query: 166 QPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVR 225
+ G V Y +I L K + A L+ M G P+L+T + IR C +
Sbjct: 270 EKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAI---IRGLCKM- 325
Query: 226 DVGRAINTFYAFKRFGFQVGI--DEFQ--GLLSALCRYKNVQDAEHLL--FCNKNVFPLE 279
G+ F F R VGI DEF L+ +CR N+ A +L + + P
Sbjct: 326 --GKLEEAFVLFNRI-LSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQP-S 381
Query: 280 IKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLF 339
I ++N ++NG C ++ R +E E+SK G+ DV++Y++++ Y K + V ++
Sbjct: 382 ILTYNTVINGLC---MAGRVSEA--DEVSK-GVVGDVITYSTLLDSYIKVQNIDAVLEIR 435
Query: 340 DQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKN 399
+ KI D + N ++ A EA L + M + ++TPD TY ++IK CK
Sbjct: 436 RRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKT 495
Query: 400 RKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIML 459
+I+EA E+FN++ K +++ + CY I
Sbjct: 496 GQIEEALEMFNELRKSSVSAAV---------------------------CYNRI------ 522
Query: 460 IRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVK 505
I C+ LD ++ + E G+ D + L+H + NG K
Sbjct: 523 IDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDK 568
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 107/460 (23%), Positives = 192/460 (41%), Gaps = 65/460 (14%)
Query: 178 SMISILGKMRKFDTAWNLIE-VMRGGGTGPSLVTPQTL---LIMIRKYCAVRDVGRAIN- 232
++IS K+ K + A E + G P+LVT TL L + K VRD+ R +
Sbjct: 176 AVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLED 235
Query: 233 -------TFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNI 285
FY+ G+ G L+ AL +QD E + + ++ S++I
Sbjct: 236 EGFEFDCVFYSNWIHGYFKG----GALVDAL-----MQDREMV----EKGMNRDVVSYSI 282
Query: 286 ILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNK 345
+++G + EA + +M K G++ ++++Y +I+ K KL + F LF+++ +
Sbjct: 283 LIDGLSKE-GNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSV 341
Query: 346 KITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEA 405
I D +Y +I + + + A ++L ME+ + P ++TYN++I LC ++ EA
Sbjct: 342 GIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA 401
Query: 406 KEVFNDMMK---------------RNITPTIRTFHAF------------------FRILR 432
EV ++ +NI + F F ++
Sbjct: 402 DEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMG 461
Query: 433 VEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYI 492
E L M E+ P TY +I+ +C+ +++E +++N +R+ VS Y
Sbjct: 462 AYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYN 520
Query: 493 VLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWL---SGRQGTEGQVTDLEHN 549
+I L G + A + IE+ KG + T + L + G +G G V LE
Sbjct: 521 RIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLE-- 578
Query: 550 QLEDDTVEKKVKATPSKFDKEKAFLREPETRRVTRDRGFS 589
QL D + K +F E + R +G +
Sbjct: 579 QLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLT 618
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 103/240 (42%), Gaps = 37/240 (15%)
Query: 277 PLEIKSFNIILNGWC--NLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYK 334
+++ + II+NG C +V +A + RG+ + ++Y S+++ + L +
Sbjct: 652 SMDVIDYTIIINGLCKEGFLV---KALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVE 708
Query: 335 VFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIK 394
+LFD ++N + P Y +I L K L +A LL +M + P+++ YNS++
Sbjct: 709 ALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVD 768
Query: 395 PLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIE 454
CK + ++A V + M +TP T +
Sbjct: 769 GYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSS---------------------------- 800
Query: 455 TYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEM 514
+I+ +C+ ++E ++ ++ +S D ++ LI G G+++EA EM
Sbjct: 801 ----MIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREM 856
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 86/436 (19%), Positives = 172/436 (39%), Gaps = 80/436 (18%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y ++I + + + A++++ M G PS++T T+ I C V A
Sbjct: 350 YVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTV---INGLCMAGRVSEADEV-- 404
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVF----PLEIKSFNIILNGWC 291
G + + LL + Y VQ+ + +L + P+++ NI+L +
Sbjct: 405 ---SKGVVGDVITYSTLLDS---YIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFL 458
Query: 292 NLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDR 351
L+ + EA+ ++ M + + D +YA+++ Y K+ ++ + ++F++++ ++
Sbjct: 459 -LMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-A 516
Query: 352 KVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVT----------------------- 388
YN +I AL K ++ A +L + + + D+ T
Sbjct: 517 VCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYG 576
Query: 389 ------------YNSLIKPLCKNRKIDEAKEVFNDMMKRNITPT------------IRTF 424
N I LCK + A EV+ M ++ +T T +R+
Sbjct: 577 LEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSL 636
Query: 425 HAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGV 484
A+ ++ E +D + Y ++I C+ L + + + + GV
Sbjct: 637 DAYLLVVNAGETTLSSMD----------VIDYTIIINGLCKEGFLVKALNLCSFAKSRGV 686
Query: 485 SHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVT 544
+ + +Y LI+GL G + EA + ++ G +P T +L L EG
Sbjct: 687 TLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLC----KEGLFL 742
Query: 545 DLEHNQLEDDTVEKKV 560
D E +L D V K +
Sbjct: 743 DAE--KLLDSMVSKGL 756
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 112/237 (47%), Gaps = 11/237 (4%)
Query: 181 SILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRF 240
+++ +R D A+ L V+ G T S + I+I C + +A+N K
Sbjct: 628 TLVDNLRSLD-AYLL--VVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSR 684
Query: 241 GFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNV--FPLEIKSFNIILNGWC--NLIVS 296
G + + L++ LC+ + +A L +N+ P E+ ++ I+++ C L +
Sbjct: 685 GVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEV-TYGILIDNLCKEGLFL- 742
Query: 297 AREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNA 356
+AE++ M +G+ +++ Y SI+ Y K + ++ + ++TPD ++
Sbjct: 743 --DAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSS 800
Query: 357 VIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMM 413
+I K ++EA+++ + N++ D + LIK C +++EA+ + +M+
Sbjct: 801 MIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML 857
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 148/377 (39%), Gaps = 44/377 (11%)
Query: 149 IRNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSL 208
I + +AA + F WA KQP Y S Y + L + R F +L E M +
Sbjct: 181 IVKEVDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGD 240
Query: 209 VTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHL 268
++ +I+ + A F + G ++ + L+ +
Sbjct: 241 LSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLM--------------M 286
Query: 269 LFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSK 328
LF NK L K+F I + M K D +Y I+ +K
Sbjct: 287 LFLNKG---LPYKAFEI------------------YESMEKTDSLLDGSTYELIIPSLAK 325
Query: 329 SSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVT 388
S +L F+LF QMK +K+ P V+++++ ++ K + ++ + M+ P
Sbjct: 326 SGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATM 385
Query: 389 YNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTF------HAFFRILRVEEEVFELLD 442
+ SLI K K+D A ++++M K P + HA L V VF+
Sbjct: 386 FVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFK--- 442
Query: 443 KMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNG 502
M + G PT TY L+ ++D KI+N M G+ SSYI L+ L
Sbjct: 443 DMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKR 502
Query: 503 KVKEAHDYYIEMQRKGF 519
V A +EM+ G+
Sbjct: 503 LVDVAGKILLEMKAMGY 519
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 114/266 (42%), Gaps = 42/266 (15%)
Query: 284 NIILNGWCNLIVSAREAERV------WHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQ 337
++ N + +I +AE++ + + + G + D +Y ++M + YK F+
Sbjct: 240 DLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFE 299
Query: 338 LFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLC 397
+++ M+ D Y +I +LAK + A L Q M++ + P ++SL+ +
Sbjct: 300 IYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMG 359
Query: 398 KNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYI 457
K ++D + +V+ + M+ G P+ ++
Sbjct: 360 KAGRLDTSMKVYME--------------------------------MQGFGHRPSATMFV 387
Query: 458 MLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRK 517
LI + + KLD ++W+ M++ G + Y ++I +GK++ A + +M++
Sbjct: 388 SLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKA 447
Query: 518 GFLPEPKTEQMLQAWLSGRQGTEGQV 543
GFLP P T L +G GQV
Sbjct: 448 GFLPTPSTYSCLLEMHAG----SGQV 469
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 141/333 (42%), Gaps = 22/333 (6%)
Query: 165 KQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAV 224
++ G + Y ++IS K K D + + M G +L T L+ CA
Sbjct: 494 QESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALI----DGCA- 548
Query: 225 RDVGRAINTFYAFKRFGF----QVGIDE--FQGLLSALCRYKNVQDAEHLLFCNK-NVFP 277
RA AF +G V D F L+SA + V A +L K P
Sbjct: 549 ----RAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHP 604
Query: 278 LEIKSFNI--ILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKV 335
++ +I ++ CN R A+ V+ + K GI+ Y ++ SKS
Sbjct: 605 IDPDHISIGALMKACCNAGQVER-AKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFA 663
Query: 336 FQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKP 395
++ MK K +TPD ++A+I +++ EA +LQ + + ++Y+SL+
Sbjct: 664 CSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGA 723
Query: 396 LCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEV---FELLDKMRELGCYPT 452
C + +A E++ + + PTI T +A L ++ E LD+++ LG P
Sbjct: 724 CCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPN 783
Query: 453 IETYIMLIRKFCRWRKLDEVFKIWNMMREDGVS 485
TY ML+ R + FK+ + + DGVS
Sbjct: 784 TITYSMLMLASERKDDFEVSFKLLSQAKGDGVS 816
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 100/224 (44%), Gaps = 12/224 (5%)
Query: 280 IKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLF 339
+ +FN++++ C A V + + G+ D Y +++S +KS K+ +F++F
Sbjct: 467 MSTFNMLMS-VCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVF 525
Query: 340 DQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKN 399
QM N + + + A+I A+ V +A + NV PD V +N+LI ++
Sbjct: 526 HQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQS 585
Query: 400 RKIDEAKEVFNDMMKRN--ITPTIRTFHAFFRIL----RVE--EEVFELLDKMRELGCYP 451
+D A +V +M I P + A + +VE +EV++++ K G
Sbjct: 586 GAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKY---GIRG 642
Query: 452 TIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLI 495
T E Y + + + D I+ M+E V+ D + LI
Sbjct: 643 TPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALI 686
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 82/209 (39%), Gaps = 36/209 (17%)
Query: 315 DVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLL 374
D + +AS K + + F+ + N P +N ++ A + ++ A +L
Sbjct: 435 DKIYHASFFKACKKQRAVKEAFRFTKLILN----PTMSTFNMLMSVCASSQDIEGARGVL 490
Query: 375 QTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE 434
+ ++++ +T D Y +LI K+ K+D EVF+ M + + TF A
Sbjct: 491 RLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGA-------- 542
Query: 435 EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVL 494
L+D GC R ++ + F + ++R V DR + L
Sbjct: 543 -----LID-----GC--------------ARAGQVAKAFGAYGILRSKNVKPDRVVFNAL 578
Query: 495 IHGLFLNGKVKEAHDYYIEMQRKGFLPEP 523
I +G V A D EM+ + +P
Sbjct: 579 ISACGQSGAVDRAFDVLAEMKAETHPIDP 607
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Query: 361 LAKGRLVKEAVNLLQTMEKNNVTP-DVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITP 419
L GR +K+ ++LL+ +++ ++ D + + S K K R + KE F K + P
Sbjct: 411 LRDGR-IKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAV---KEAFR-FTKLILNP 465
Query: 420 TIRTFHAFFRILRVEEEVFE---LLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIW 476
T+ TF+ + +++ +L ++E G + Y LI + K+D +F+++
Sbjct: 466 TMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVF 525
Query: 477 NMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
+ M GV + ++ LI G G+V +A Y ++ K P+
Sbjct: 526 HQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPD 571
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 112/238 (47%), Gaps = 8/238 (3%)
Query: 273 KNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSK-RGIQHDVVSYASIMSCYSKSSK 331
K V P + +F +++G C +EA ++ H+M K G++ V YAS++ + +
Sbjct: 181 KKVKPTGV-TFGTLIHGLCK-DSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGE 238
Query: 332 LYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNS 391
L F+L D+ KI D +Y+ +I +L K E +L+ M + PD VTYN
Sbjct: 239 LSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNV 298
Query: 392 LIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFH----AFFRILRVEEEVFELLDKMREL 447
LI C + A V ++M+++ + P + +++ FFRI + EE + L + M
Sbjct: 299 LINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATY-LFEDMPRR 357
Query: 448 GCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVK 505
GC P +Y ++ C + +E I + M G R + L +GK++
Sbjct: 358 GCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLE 415
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 7/235 (2%)
Query: 315 DVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLL 374
D +Y ++ S+S +LFD+M KK+ P + +IH L K VKEA+ +
Sbjct: 151 DACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMK 210
Query: 375 QTMEK-NNVTPDVVTYNSLIKPLCKNRKIDEA----KEVFNDMMKRNITPTIRTFHAFFR 429
M K V P V Y SLIK LC+ ++ A E + +K + + +
Sbjct: 211 HDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIK 270
Query: 430 ILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRS 489
R EV +L++M E GC P TY +LI FC + ++ + M E G+ D
Sbjct: 271 AGR-SNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVI 329
Query: 490 SYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML-QAWLSGRQGTEGQV 543
SY +++ F K +EA + +M R+G P+ + +++ G Q E V
Sbjct: 330 SYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAV 384
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Query: 282 SFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQ 341
++N+++NG+C + + A RV EM ++G++ DV+SY I+ + + K + LF+
Sbjct: 295 TYNVLINGFC-VENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFED 353
Query: 342 MKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRK 401
M + +PD Y V L +G +EA +L M P ++ LC++ K
Sbjct: 354 MPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGK 413
Query: 402 IDEAKEVFNDM 412
++ +V + +
Sbjct: 414 LEILSKVISSL 424
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 151/341 (44%), Gaps = 38/341 (11%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIM-IRKYCAVRDVGRA 230
++R ++ ++ K +K + AW +++ M G P VT T+ ++K VR
Sbjct: 187 NIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEV 246
Query: 231 INTFYAFKRF---GFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNV-FPLEIKSFNII 286
+ ++ G GI ++ CR V+D + K + + FN +
Sbjct: 247 VEKMVMKEKAKPNGRTCGI-----VVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSL 301
Query: 287 LNGWCN---------------LIVSAREAERVWHE---------MSKRGIQHDVVSYASI 322
+NG+ L+ E E V ++ M + ++ DV++Y+++
Sbjct: 302 INGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTV 361
Query: 323 MSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNV 382
M+ +S + + K Q+F +M + PD Y+ + + + K+A LL+T+ +
Sbjct: 362 MNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES- 420
Query: 383 TPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAF-FRILRVEE--EVFE 439
P+VV + ++I C N +D+A VFN M K ++P I+TF + L V++ + E
Sbjct: 421 RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEE 480
Query: 440 LLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMR 480
+L MR G P T+++L + DE K N ++
Sbjct: 481 VLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALK 521
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 112/227 (49%), Gaps = 12/227 (5%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
EA+ V+ +++ G + ++SY ++++ + + + + +++ D +NAVI
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKR--- 415
+A ++ +++AV L M++ + P TYN+LIK K + + E+ + M++
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNV 182
Query: 416 NITPTIRTFHAFFRIL---RVEEEVFELLDKMRELGCYPTIETYIML----IRKFCRWRK 468
++ P IRTF+ + + EE +E++ KM E G P TY + ++K R
Sbjct: 183 DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA 242
Query: 469 LDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQ 515
EV + +M+E + R+ IV + G G+V++ + M+
Sbjct: 243 ESEVVEKM-VMKEKAKPNGRTCGIV-VGGYCREGRVRDGLRFVRRMK 287
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 116/281 (41%), Gaps = 36/281 (12%)
Query: 283 FNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQM 342
FN ++N + + +A + +M + G+ +Y +++ Y + K + +L D M
Sbjct: 118 FNAVINAFSE-SGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLM 176
Query: 343 ---KNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLC-K 398
N + P+ + +N ++ A K + V+EA +++ ME+ V PD VTYN++ K
Sbjct: 177 LEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQK 236
Query: 399 NRKIDEAKEVFNDM-MKRNITPTIRT----FHAFFRILRVEEEVFELLDKMRELGCYPTI 453
+ EV M MK P RT + R RV + + +M+E+ +
Sbjct: 237 GETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDG-LRFVRRMKEMRVEANL 295
Query: 454 ETYIMLIRKFCRWRK---LDEV----------------------FKIWNMMREDGVSHDR 488
+ LI F +DEV ++ +M+E V D
Sbjct: 296 VVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADV 355
Query: 489 SSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
+Y +++ G +++A + EM + G P+ +L
Sbjct: 356 ITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSIL 396
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 121/292 (41%), Gaps = 40/292 (13%)
Query: 276 FPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKV 335
P ++ S+N++++G L A+ + M ++GI+ D+ ++ +M+ K +
Sbjct: 535 MPWDVVSYNVLISGM--LKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGI 592
Query: 336 FQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVT------- 388
+L+D+MK+ I P N V+ L + ++EA+++L M + P++ T
Sbjct: 593 LKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDT 652
Query: 389 ----------------------------YNSLIKPLCKNRKIDEAKEVFNDMMKRNITPT 420
YN+LI LCK +A V DM R P
Sbjct: 653 SSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPD 712
Query: 421 IRTFHAFFRILRVEEEVFELLDK---MRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWN 477
TF++ V V + L M E G P + TY +IR + EV K +
Sbjct: 713 TVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLS 772
Query: 478 MMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
M+ G+ D +Y LI G G +K + Y EM G +P+ T +L
Sbjct: 773 EMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVL 824
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 115/286 (40%), Gaps = 49/286 (17%)
Query: 253 LSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGI 312
LSA+C + V D+ ++ I FN+ NG + VS ++ +M G+
Sbjct: 81 LSAMCTFGVVPDSR--------LWNSLIHQFNV--NGLVHDQVSL-----IYSKMIACGV 125
Query: 313 QHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVN 372
DV + ++ + K +L L ++N+ I+ D YN VI L + L EA
Sbjct: 126 SPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCEHGLADEAYQ 182
Query: 373 LLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAK-------------------------- 406
L M K + PD V+YN+LI CK AK
Sbjct: 183 FLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHA 242
Query: 407 --EVFNDMMKRNITPTIRTFHAFFRILRVEEEVFE---LLDKMRELGCYPTIETYIMLIR 461
E + DM+ P + TF + L +V E LL +M E+ YP TY L+
Sbjct: 243 IEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVD 302
Query: 462 KFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEA 507
+ +++ M G+ D Y VL+ GLF G ++EA
Sbjct: 303 SLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREA 348
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 151/346 (43%), Gaps = 13/346 (3%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y+++IS L + D A+ + M G P V+ TL I +C V + RA
Sbjct: 164 YNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTL---IDGFCKVGNFVRA----K 216
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIILNGWCNLIV 295
A ++ + LLS+ +++A + + F ++ +F+ I+N C
Sbjct: 217 ALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSG--FDPDVVTFSSIINRLCKG-G 273
Query: 296 SAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYN 355
E + EM + + + V+Y +++ K++ L+ QM + I D VY
Sbjct: 274 KVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYT 333
Query: 356 AVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKR 415
++ L K ++EA + + ++N P+VVTY +L+ LCK + A+ + M+++
Sbjct: 334 VLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEK 393
Query: 416 NITPTIRTFHAFFRIL---RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEV 472
++ P + T+ + + EE LL KM + P TY +I + K +
Sbjct: 394 SVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMA 453
Query: 473 FKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKG 518
++ MR GV + L++ L G++KE +M KG
Sbjct: 454 IELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKG 499
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 4/186 (2%)
Query: 283 FNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQM 342
+N ++ C L ++ ++A V +M RG D V++ S+M Y S + K + M
Sbjct: 681 YNTLIATLCKLGMT-KKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVM 739
Query: 343 KNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKI 402
I+P+ YN +I L+ L+KE L M+ + PD TYN+LI K +
Sbjct: 740 MEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNM 799
Query: 403 DEAKEVFNDMMKRNITPTIRTFHAF---FRILRVEEEVFELLDKMRELGCYPTIETYIML 459
+ ++ +M+ + P T++ F + + ELL +M + G P TY +
Sbjct: 800 KGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTM 859
Query: 460 IRKFCR 465
I C+
Sbjct: 860 ISGLCK 865
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 123/270 (45%), Gaps = 7/270 (2%)
Query: 276 FPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKV 335
P+++ + ++++G REAE+ + + + +VV+Y +++ K+ L
Sbjct: 325 IPVDLVVYTVLMDGLFK-AGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSA 383
Query: 336 FQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKP 395
+ QM K + P+ Y+++I+ K +++EAV+LL+ ME NV P+ TY ++I
Sbjct: 384 EFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDG 443
Query: 396 LCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFF----RILRVEEEVFELLDKMRELGCYP 451
L K K + A E+ +M + A RI R+ +EV L+ M G
Sbjct: 444 LFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRI-KEVKGLVKDMVSKGVTL 502
Query: 452 TIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYY 511
Y LI F + + M+E G+ D SY VLI G+ GKV A Y
Sbjct: 503 DQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAY 561
Query: 512 IEMQRKGFLPEPKTEQMLQAWLSGRQGTEG 541
M+ KG P+ T ++ + +EG
Sbjct: 562 KGMREKGIEPDIATFNIMMNSQRKQGDSEG 591
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 12/210 (5%)
Query: 319 YASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQT-M 377
+ ++ Y +LY + M + PD +++N++IH LV + V+L+ + M
Sbjct: 61 FHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKM 120
Query: 378 EKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEV 437
V+PDV N LI CK ++ A + + + T T T + + +E
Sbjct: 121 IACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEA 180
Query: 438 FELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHG 497
++ L +M ++G P +Y LI FC K+ N +R + + S ++ H
Sbjct: 181 YQFLSEMVKMGILPDTVSYNTLIDGFC---------KVGNFVRAKALVDEISELNLITHT 231
Query: 498 LFLNG--KVKEAHDYYIEMQRKGFLPEPKT 525
+ L+ + + Y +M GF P+ T
Sbjct: 232 ILLSSYYNLHAIEEAYRDMVMSGFDPDVVT 261
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 145/318 (45%), Gaps = 10/318 (3%)
Query: 245 GIDEFQGLLSALCRYKNVQDAEHLLF--CNKNVFPLEIKSFNIILNGWCNLIVSAREAER 302
G + ++ A R ++DA L K P + + +I++N N REAE
Sbjct: 703 GKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAV-TISILVNALTNR-GKHREAEH 760
Query: 303 VWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALA 362
+ ++ I+ D V Y +++ ++ KL +++++M + + YN +I
Sbjct: 761 ISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYG 820
Query: 363 KGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIR 422
+G + +A+ + ++ + D Y ++I K K+ EA +F++M K+ I P
Sbjct: 821 RGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTP 880
Query: 423 TFHAFFRIL---RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMM 479
+++ +I R+ EV ELL M G + TY+ LI+ + + E K ++
Sbjct: 881 SYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLV 940
Query: 480 REDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQ-MLQAWLSGRQG 538
+E G+ S + L+ L G ++EA Y +M G P+ ++ +L+ +++
Sbjct: 941 KEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDA 1000
Query: 539 TEGQV--TDLEHNQLEDD 554
+G + + + +EDD
Sbjct: 1001 EKGILFYEKMIRSSVEDD 1018
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 109/237 (45%), Gaps = 10/237 (4%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
+AE + + + G++ + + A++++ Y + KL + +L+ K TP + V ++I
Sbjct: 653 KAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESK-TPGKSVIRSMI 711
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
A + +++A L + P VT + L+ L K EA+ + +++NI
Sbjct: 712 DAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIE 771
Query: 419 PTIRTFHAFFRI------LRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEV 472
++ + L+ E++E +M G +I+TY +I + R +LD+
Sbjct: 772 LDTVGYNTLIKAMLEAGKLQCASEIYE---RMHTSGVPCSIQTYNTMISVYGRGLQLDKA 828
Query: 473 FKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
+I++ R G+ D Y +I GK+ EA + EMQ+KG P + M+
Sbjct: 829 IEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMM 885
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 78/387 (20%), Positives = 140/387 (36%), Gaps = 49/387 (12%)
Query: 153 WEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQ 212
W FF W Q Y SV Y ++ + G++ K A M G P V
Sbjct: 168 WRQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACG 227
Query: 213 TLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCN 272
T+L + R+G + F YK VQ+ LL +
Sbjct: 228 TMLC-------------------TYARWGRHSAMLTF---------YKAVQERRILLSTS 259
Query: 273 KNVF---PLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKS 329
F L+ KSF+ + +W EM + G+ + +Y ++S Y+K
Sbjct: 260 VYNFMLSSLQKKSFH-------------GKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQ 306
Query: 330 SKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTY 389
+ + F +MK+ P+ Y++VI K ++A+ L + M + P T
Sbjct: 307 GFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTC 366
Query: 390 NSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAF-FRI---LRVEEEVFELLDKMR 445
+++ K +A +F D M+RN P RI L + + + ++
Sbjct: 367 ATMLSLYYKTENYPKALSLFAD-MERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETE 425
Query: 446 ELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVK 505
L +TY+ + + + + + MM+ + R +YIV++ V
Sbjct: 426 RLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVD 485
Query: 506 EAHDYYIEMQRKGFLPEPKTEQMLQAW 532
A + + + + G ML +
Sbjct: 486 CAEEAFRALSKTGLPDASSCNDMLNLY 512
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 93/178 (52%), Gaps = 3/178 (1%)
Query: 310 RGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKE 369
+G +HD +Y +++ + ++ ++ ++ +F MK K + D Y ++IH ++ V
Sbjct: 116 KGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDG 175
Query: 370 AVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFR 429
A+ L + M N P VV+Y + +K L + +++EA EV+ +M++ ++P T+
Sbjct: 176 AMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLME 235
Query: 430 ILRVE---EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGV 484
L EE ++ KM+E+G P +LI K ++ + + ++ M+E+GV
Sbjct: 236 YLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGV 293
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 64/118 (54%), Gaps = 2/118 (1%)
Query: 303 VWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHAL- 361
V+H M ++G+ D V+Y S++ S S + +L+++M++ P Y A + L
Sbjct: 144 VFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLF 203
Query: 362 AKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITP 419
A GR V+EA + + M ++ V+P+ TY L++ L K +EA ++F M + + P
Sbjct: 204 ADGR-VEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQP 260
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 70/150 (46%), Gaps = 3/150 (2%)
Query: 385 DVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEV---FELL 441
D TY +++ + +I VF+ M ++ + T+ + + +V L
Sbjct: 121 DHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLW 180
Query: 442 DKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLN 501
++MR+ GC PT+ +Y ++ +++E +++ M VS + +Y VL+ L
Sbjct: 181 EEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVAT 240
Query: 502 GKVKEAHDYYIEMQRKGFLPEPKTEQMLQA 531
GK +EA D + +MQ G P+ +L A
Sbjct: 241 GKCEEALDIFFKMQEIGVQPDKAACNILIA 270
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 68/156 (43%), Gaps = 3/156 (1%)
Query: 300 AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIH 359
A R+W EM G + VVSY + M ++ + +++ +M +++P+ Y ++
Sbjct: 176 AMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLME 235
Query: 360 ALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITP 419
L +EA+++ M++ V PD N LI K + V M + +
Sbjct: 236 YLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGV-- 293
Query: 420 TIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIET 455
+ + F L + E D +RE+ + ++E+
Sbjct: 294 -VLRYPIFVEALETLKAAGESDDLLREVNSHISVES 328
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 157/393 (39%), Gaps = 20/393 (5%)
Query: 157 FTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPS---LVTPQT 213
F F WA + H + M L +FD + L+ + S P+
Sbjct: 97 FAVFNWAATLDTFRHDHDSFLWMSRSLAATHRFDDLYRLLSFVAANPCPCSSGIFSCPEL 156
Query: 214 LLIM---IRKYCAVRDVGRAINTFYAFKRF-GFQVGIDEFQGLLSALCRYKNVQDAEHLL 269
I I YC R + A+ F KR + + + +++ + ++ A L
Sbjct: 157 EPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKA--LR 214
Query: 270 F---CNKNVFPLEIKSFNIILNGWCNLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMS 324
F K ++ +FNI++NG+C S++ A ++ EM ++G + +VVS+ +++
Sbjct: 215 FYQRMGKERAKPDVCTFNILINGYCR---SSKFDLALDLFREMKEKGCEPNVVSFNTLIR 271
Query: 325 CYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTP 384
+ S K+ + ++ +M ++ L + V +A L+ + V P
Sbjct: 272 GFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLP 331
Query: 385 DVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELL 441
Y SL++ LC K A E+ ++ K+ TP LR E+ +
Sbjct: 332 SEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFM 391
Query: 442 DKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLN 501
+KM G P T+ +L+R C + ++ + G D ++Y VL+ G
Sbjct: 392 EKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKE 451
Query: 502 GKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLS 534
G+ KE EM K LP+ T L LS
Sbjct: 452 GRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLS 484
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 117/277 (42%), Gaps = 8/277 (2%)
Query: 151 NDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVT 210
D + A F+ GK+ V ++ +I+ + KFD A +L M+ G P++V+
Sbjct: 207 GDMDKALRFYQRMGKERAKP-DVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVS 265
Query: 211 PQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF 270
TL IR + + + + Y G + + L+ LCR V DA L+
Sbjct: 266 FNTL---IRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVL 322
Query: 271 --CNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSK 328
NK V P E + ++ C + R E + E+ K+G ++ +++ K
Sbjct: 323 DLLNKRVLPSEF-DYGSLVEKLCGENKAVRAME-MMEELWKKGQTPCFIACTTLVEGLRK 380
Query: 329 SSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVT 388
S + K ++M N I PD +N ++ L +A L PD T
Sbjct: 381 SGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETT 440
Query: 389 YNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFH 425
Y+ L+ K + E + + N+M+ +++ P I T++
Sbjct: 441 YHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYN 477
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 122/248 (49%), Gaps = 5/248 (2%)
Query: 300 AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNK-KITPDRKVYNAVI 358
A++V+ EM +R + +S+ ++++ S K V +F ++ K I PD YN +I
Sbjct: 125 AQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLI 184
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
L EAV L+ +E + PD +T+N L+ K +E ++++ M+++N+
Sbjct: 185 KGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVK 244
Query: 419 PTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKI 475
IR+++A L +E EE+ L DK++ P + T+ +I+ F KLDE
Sbjct: 245 RDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITW 304
Query: 476 WNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFL-PEPKTEQMLQAWLS 534
+ + ++G + + L+ + G ++ A++ E+ K L E ++++ A +
Sbjct: 305 YKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVK 364
Query: 535 GRQGTEGQ 542
G + E +
Sbjct: 365 GSKQDEAE 372
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 103/233 (44%), Gaps = 7/233 (3%)
Query: 282 SFNIILNGWCNLIVSAREAERVWHEM-SKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFD 340
SFN +LN N E ++ E+ K I+ DV SY +++ + L D
Sbjct: 143 SFNALLNACVN-SKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALID 201
Query: 341 QMKNKKITPDRKVYNAVIH-ALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKN 399
+++NK + PD +N ++H + KG+ +E + M + NV D+ +YN+ + L
Sbjct: 202 EIENKGLKPDHITFNILLHESYTKGKF-EEGEQIWARMVEKNVKRDIRSYNARLLGLAME 260
Query: 400 RKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMREL---GCYPTIETY 456
K +E +F+ + + P + TF A + E ++ E + +E+ GC P +
Sbjct: 261 NKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVF 320
Query: 457 IMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHD 509
L+ C+ L+ +++ + + D + ++ L K EA +
Sbjct: 321 NSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEE 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 87/181 (48%), Gaps = 4/181 (2%)
Query: 239 RFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCNLIVS 296
+ + + + L+ LC + +A L+ NK + P I +FNI+L+
Sbjct: 170 KLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHI-TFNILLHE-SYTKGK 227
Query: 297 AREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNA 356
E E++W M ++ ++ D+ SY + + + +K ++ LFD++K ++ PD + A
Sbjct: 228 FEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTA 287
Query: 357 VIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRN 416
+I + EA+ + +EKN P +NSL+ +CK ++ A E+ ++ +
Sbjct: 288 MIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKR 347
Query: 417 I 417
+
Sbjct: 348 L 348
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 95/238 (39%), Gaps = 40/238 (16%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
E + + MSK G A I++ Y + ++FD+M + +NA++
Sbjct: 95 EEQNKYPNMSKEGF------VARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALL 148
Query: 359 HALAKGRLVKEAVNLLQTME-KNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNI 417
+A + + + + K ++ PDV +YN+LIK LC EA + +++ + +
Sbjct: 149 NACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGL 208
Query: 418 TPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWN 477
P TF+ I+L + + K +E +IW
Sbjct: 209 KPDHITFN-------------------------------ILLHESYTKG-KFEEGEQIWA 236
Query: 478 MMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT-EQMLQAWLS 534
M E V D SY + GL + K +E + +++ P+ T M++ ++S
Sbjct: 237 RMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVS 294
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 130/272 (47%), Gaps = 12/272 (4%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
EA+R+ EM G + +YA++++ Y + L L++ M+ + P+ VY ++I
Sbjct: 568 EAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLI 627
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
+ A+ +V+EA+ + ME++ V + + SLIK K ++EA+ V++ M
Sbjct: 628 NGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGG 687
Query: 419 PTIRTFHAFFRI---LRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKI 475
P + ++ + L + E + + +RE G I ++ ++ + LDE ++
Sbjct: 688 PDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVI-SFATMMYLYKGMGMLDEAIEV 746
Query: 476 WNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEM--QRKGFLPEPKTEQMLQAWL 533
MRE G+ D +S+ ++ +G++ E + + EM +RK L + T + L L
Sbjct: 747 AEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERK-LLLDWGTFKTLFTLL 805
Query: 534 SGRQGTEGQVTDLEHNQLEDDTVEKKVKATPS 565
+G V +QL+ E K ATP+
Sbjct: 806 K-----KGGVPSEAVSQLQTAYNEAKPLATPA 832
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 155/381 (40%), Gaps = 41/381 (10%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
+++MI G A +L++ M G P +T I++ + D+ A+ +
Sbjct: 343 FNTMIHTCGTHGHLSEAESLLKKMEEKGISPD---TKTYNILLSLHADAGDIEAALEYYR 399
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF-CNKNVFPLEIKSFNIILNGWCN-- 292
++ G + +L LC+ K V + E ++ ++N ++ S +I+ + N
Sbjct: 400 KIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEG 459
Query: 293 LIVSAR-------------------------------EAERVWH-EMSKRGIQHDVVSYA 320
L+V A+ EAE V++ + + G ++DV+ Y
Sbjct: 460 LVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYN 519
Query: 321 SIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKN 380
++ Y K+ K LF MKN+ PD YN++ LA LV EA +L M +
Sbjct: 520 VMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDS 579
Query: 381 NVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAF---FRILRVEEEV 437
P TY ++I + + +A +++ M K + P + + F + EE
Sbjct: 580 GCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEA 639
Query: 438 FELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHG 497
+ M E G LI+ + + L+E ++++ M++ D ++ ++
Sbjct: 640 IQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSL 699
Query: 498 LFLNGKVKEAHDYYIEMQRKG 518
G V EA + ++ KG
Sbjct: 700 CADLGIVSEAESIFNALREKG 720
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/442 (21%), Positives = 175/442 (39%), Gaps = 55/442 (12%)
Query: 153 WEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQ 212
W A T F G + V EY+ MI GK + + A +L + M+ GT P T
Sbjct: 495 WVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYN 554
Query: 213 TLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFC- 271
+L M+ V V A G + G + ++++ R + DA L
Sbjct: 555 SLFQML---AGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAM 611
Query: 272 -NKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSS 330
V P E+ + ++NG+ + EA + + M + G+Q + + S++ YSK
Sbjct: 612 EKTGVKPNEV-VYGSLINGFAESGM-VEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVG 669
Query: 331 KLYKVFQLFDQMKNKKITPDRKVYNAVIHALA-----------------KGR-------- 365
L + +++D+MK+ + PD N+++ A KG
Sbjct: 670 CLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFAT 729
Query: 366 ---------LVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMM-KR 415
++ EA+ + + M ++ + D ++N ++ + ++ E E+F++M+ +R
Sbjct: 730 MMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVER 789
Query: 416 NITPTIRTFHAFFRILR----VEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDE 471
+ TF F +L+ E V +L E T L +
Sbjct: 790 KLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAY--- 846
Query: 472 VFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQA 531
+ + + + +Y +I+ +G + A Y+ MQ KG P+ T QA
Sbjct: 847 ALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVT----QA 902
Query: 532 WLSGRQGTEGQVTDLE--HNQL 551
+L G G G V ++ H++L
Sbjct: 903 YLVGIYGKAGMVEGVKRVHSRL 924
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 117/287 (40%), Gaps = 41/287 (14%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
+A ++ EM K G+ D V++ +++ L + L +M+ K I+PD K YN ++
Sbjct: 323 DAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILL 382
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNI- 417
A ++ A+ + + K + PD VT+ +++ LC+ + + E + V +M + +I
Sbjct: 383 SLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIR 442
Query: 418 -----TPTIRTFHAFFRILRVEEEVFE---------------LLDKMRELGCYPTIET-- 455
P I + ++ + +FE ++D E G + ET
Sbjct: 443 IDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVF 502
Query: 456 ---------------YIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFL 500
Y ++I+ + + + ++ ++ M+ G D +Y L L
Sbjct: 503 YGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAG 562
Query: 501 NGKVKEAHDYYIEMQRKGFLPEPKT-EQMLQAWLSGRQGTEGQVTDL 546
V EA EM G P KT M+ +++ R G DL
Sbjct: 563 VDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYV--RLGLLSDAVDL 607
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 88/213 (41%), Gaps = 16/213 (7%)
Query: 353 VYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDM 412
+N +I K + +A NL M K+ V D VT+N++I + + EA+ + M
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 413 MKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKL 469
++ I+P +T++ + E E K+R++G +P T+ ++ C+ + +
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 470 DEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
EV + M + + D S V++ G V +A + Q L ++
Sbjct: 427 AEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVI 486
Query: 530 QAWLS------------GRQGTEGQVTD-LEHN 549
+ G++ GQ D LE+N
Sbjct: 487 DVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYN 519
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%)
Query: 318 SYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTM 377
++ +++ Y K+ +L LF +M + D +N +IH + EA +LL+ M
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 378 EKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL 431
E+ ++PD TYN L+ I+ A E + + K + P T A IL
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHIL 420
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 105/219 (47%), Gaps = 12/219 (5%)
Query: 315 DVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLL 374
DV +Y +++ K + F + D M+ + P +Y+++I +L K V EA
Sbjct: 546 DVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETF 605
Query: 375 QTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAF---FRIL 431
M ++ + PD + Y +I +N +IDEA E+ +++K + P+ T+ F +
Sbjct: 606 AKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKM 665
Query: 432 RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSY 491
+ E+ + LDKM E G P + Y LI F + F ++ +M E+ + HD +Y
Sbjct: 666 GMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAY 725
Query: 492 IVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQ 530
I L+ GL+ K +++ + EP E++LQ
Sbjct: 726 ITLLSGLWRAMARK---------KKRQVIVEPGKEKLLQ 755
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 137/315 (43%), Gaps = 12/315 (3%)
Query: 178 SMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAF 237
SM+ L K+R+FD A ++ + G PS + +++ + C A + F
Sbjct: 136 SMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSS---LVVDELCNQDRFLEAFHCFEQV 192
Query: 238 KRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCNLIV 295
K G + + + L LC + ++ +A +L C PL + + + +C
Sbjct: 193 KERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGC 252
Query: 296 SAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYN 355
+A EAE ++ M G D V Y +M Y K + + +L+ +M + D ++N
Sbjct: 253 AA-EAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFN 311
Query: 356 AVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVF-----N 410
+IH K ++ + + M K V +V TY+ +I CK +D A +F +
Sbjct: 312 TLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGS 371
Query: 411 DMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLD 470
+ + RN+ F++ +++ V +LL +M + G P TY +L++ + +L
Sbjct: 372 EDISRNVHCYTNLIFGFYKKGGMDKAV-DLLMRMLDNGIVPDHITYFVLLKMLPKCHELK 430
Query: 471 EVFKIWNMMREDGVS 485
I + ++G
Sbjct: 431 YAMVILQSILDNGCG 445
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 11/230 (4%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
+ E + E++++ V A + + ++M N TP YN+VI
Sbjct: 460 KVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVI 519
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
L + ++++ +L+ +++ + PDV TY ++ LCK D A + + M + +
Sbjct: 520 KCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLR 579
Query: 419 PTIRTFHAFFRILRVEEEVF---ELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKI 475
PT+ + + L + V E KM E G P Y+++I + R ++DE
Sbjct: 580 PTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEA--- 636
Query: 476 WNMMREDGVSH----DRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
N + E+ V H +Y VLI G G +++ Y +M G P
Sbjct: 637 -NELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSP 685
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 120/288 (41%), Gaps = 40/288 (13%)
Query: 312 IQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAV 371
I +V Y +++ + K + K L +M + I PD Y ++ L K +K A+
Sbjct: 374 ISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAM 433
Query: 372 NLLQTMEKNN--VTPDV--------VTYNSLI-------------------KPLCKNRKI 402
+LQ++ N + P V V SL+ LC R
Sbjct: 434 VILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNY 493
Query: 403 DEAKEVFNDMMKRNITPTIRTFHAFFRIL---RVEEEVFELLDKMRELGCYPTIETYIML 459
A M+ TP ++++ + L + E++ L++ ++EL P ++TY+++
Sbjct: 494 IAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIV 553
Query: 460 IRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGF 519
+ + C+ D F I + M E G+ + Y +I L G+V EA + + +M G
Sbjct: 554 VNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGI 613
Query: 520 LPEPKTEQMLQAWLSGRQGTEGQVTDLEHNQLEDDTVEKKVKATPSKF 567
P+ + M+ R G E N+L ++ V+ ++ PS F
Sbjct: 614 QPD-EIAYMIMINTYARNGRID-----EANELVEEVVKHFLR--PSSF 653
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 86/180 (47%), Gaps = 6/180 (3%)
Query: 309 KRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVK 368
K+ I ++ + +I++ Y + +L + + + M+ + I P+ Y ++ + + ++
Sbjct: 787 KKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIE 846
Query: 369 EAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFF 428
A++L E N PD V Y++L+K LC ++ +A + +M K I P ++
Sbjct: 847 SAIDLF---EGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLL 903
Query: 429 RIL---RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVS 485
+ L R+ E +++ M L +P + LI C +KL E ++ +M + G S
Sbjct: 904 QCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSGRS 963
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/347 (20%), Positives = 155/347 (44%), Gaps = 20/347 (5%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y+S+I L + + +L+ +++ P + T LI++ + C D A
Sbjct: 515 YNSVIKCLFQENIIEDLASLVNIIQELDFVPDV---DTYLIVVNELCKKNDRDAAFAIID 571
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCNL 293
A + G + + + ++ +L + V +AE + P EI ++ I++N +
Sbjct: 572 AMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEI-AYMIMINTYAR- 629
Query: 294 IVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDR 351
+ R EA + E+ K ++ +Y ++S + K + K Q D+M ++P+
Sbjct: 630 --NGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNV 687
Query: 352 KVYNAVI-HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFN 410
+Y A+I H L KG K + L M +N++ D + Y +L+ L + + ++V
Sbjct: 688 VLYTALIGHFLKKGDF-KFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIV 746
Query: 411 D-----MMKRNI-TPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFC 464
+ +++R I T + + + + E++ K+++ P + + +I +C
Sbjct: 747 EPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKK-SIIPNLYLHNTIITGYC 805
Query: 465 RWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYY 511
+LDE + M+++G+ + +Y +L+ G ++ A D +
Sbjct: 806 AAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLF 852
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 8/138 (5%)
Query: 284 NIILNGWCNLIVSAREAERVWH--EMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQ 341
N I+ G+C + R E H M K GI ++V+Y +M + ++ + LF+
Sbjct: 798 NTIITGYC---AAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE- 853
Query: 342 MKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRK 401
PD+ +Y+ ++ L + +A+ L+ M+K+ + P+ +Y L++ LC +R
Sbjct: 854 --GTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRL 911
Query: 402 IDEAKEVFNDMMKRNITP 419
EA +V DM +I P
Sbjct: 912 TMEAVKVVKDMAALDIWP 929
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 150/395 (37%), Gaps = 76/395 (19%)
Query: 150 RNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLV 209
+ND +AAF + A ++ G +V Y S+I LGK + A M G P +
Sbjct: 560 KNDRDAAFAI-IDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEI 618
Query: 210 TPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL 269
+IMI Y R+ GR IDE L+ + ++
Sbjct: 619 A---YMIMINTY--ARN-GR----------------IDEANELVEEVVKH---------- 646
Query: 270 FCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKS 329
F + F ++ ++++G+ + + + + + +M + G+ +VV Y +++ + K
Sbjct: 647 FLRPSSF-----TYTVLISGFVKMGMMEKGCQYL-DKMLEDGLSPNVVLYTALIGHFLKK 700
Query: 330 SKLYKVFQLFDQMKNKKITPDRKVYNAVIHAL--AKGRLVKEAV-------NLLQ----- 375
F LF M I D Y ++ L A R K V LLQ
Sbjct: 701 GDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRT 760
Query: 376 ------------------TME-----KNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDM 412
ME K ++ P++ +N++I C ++DEA M
Sbjct: 761 KPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESM 820
Query: 413 MKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEV 472
K I P + T+ + ++ +D C P Y L++ C +++ +
Sbjct: 821 QKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGTNCEPDQVMYSTLLKGLCDFKRPLDA 880
Query: 473 FKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEA 507
+ M++ G++ ++ SY L+ L + EA
Sbjct: 881 LALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEA 915
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 148/377 (39%), Gaps = 43/377 (11%)
Query: 155 AAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTL 214
AA F W ++H+ + G+ + F +I +G G +L +
Sbjct: 125 AALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIISKYKGIAGGKTLESAIDR 184
Query: 215 LIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKN 274
L+ + V D + Y KR + + ++ LC + AE ++ N
Sbjct: 185 LVRAGRPKQVTDFFEKMENDYGLKRDKESLTL-----VVKKLCEKGHASIAEKMVKNTAN 239
Query: 275 -VFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLY 333
+FP E +++++GWC + EA R+ EMS+ G + +Y ++ C K +
Sbjct: 240 EIFPDE-NICDLLISGWC-IAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKK 297
Query: 334 KVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLI 393
F +L E +L ME V + T+N LI
Sbjct: 298 DPF----------------------------KLQPEVEKVLLEMEFRGVPRNTETFNVLI 329
Query: 394 KPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL----RVEEEVFELLDKMRELGC 449
LCK R+ +EA +F M + P T+ R L R+ E E++DKM+ G
Sbjct: 330 NNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGD-EMIDKMKSAGY 388
Query: 450 YPTI--ETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEA 507
+ + Y ++ C +L+ ++ M+ +G +Y +L+ + N ++ A
Sbjct: 389 GELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRA 448
Query: 508 HDYYIEMQRKGFLPEPK 524
+ Y E +KG PK
Sbjct: 449 NGLYKEAAKKGIAVSPK 465
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/227 (19%), Positives = 103/227 (45%), Gaps = 11/227 (4%)
Query: 216 IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDA--------EH 267
++I +C + A R GF++G + +L +C+ +D +
Sbjct: 250 LLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKV 309
Query: 268 LLFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYS 327
LL P ++FN+++N C I EA ++ M + G Q D +Y ++
Sbjct: 310 LLEMEFRGVPRNTETFNVLINNLCK-IRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLY 368
Query: 328 KSSKLYKVFQLFDQMKNKKITP--DRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPD 385
+++++ + ++ D+MK+ ++K Y + L ++ A+++ ++M+ N P
Sbjct: 369 QAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPG 428
Query: 386 VVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILR 432
+ TY+ L+ +C N ++ A ++ + K+ I + + + R ++
Sbjct: 429 IKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYRVDPRFMK 475
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 172/401 (42%), Gaps = 42/401 (10%)
Query: 153 WEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLI-EVMRGGGTGPSLVTP 211
W A+ FF WA KQ GY + + Y++M SIL + R+ + L+ +V+ ++P
Sbjct: 86 WGLAYLFFNWASKQEGYRNDMYAYNAMASILSRARQNASLKALVVDVL----NSRCFMSP 141
Query: 212 QTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQV-GIDEFQGLLSALCRY--KNVQDAEHL 268
IR V A + F + G V + LL A+ + +V+ E
Sbjct: 142 GAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEAR 201
Query: 269 LFCNKNV-FPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYS 327
L ++ F + + +L +CN S R A V++E+ RG + +S ++S +
Sbjct: 202 LKEMRDCGFHFDKFTLTPVLQVYCNTGKSER-ALSVFNEILSRGWLDEHISTILVVS-FC 259
Query: 328 KSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVV 387
K ++ K F+L + ++ + I + K Y +IH K + +A L + M + + D+
Sbjct: 260 KWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIA 319
Query: 388 TYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPT-------IRTFHAFFRILRVEEEVFEL 440
Y+ LI LCK++ ++ A ++ ++ + I P + +F + R+ E +
Sbjct: 320 LYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGD 379
Query: 441 LDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFK-IWNMM---REDGVSH---------- 486
+DK + Y + L F R + E + I N+M DGVS
Sbjct: 380 IDKKSVMLLYKS------LFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNK 433
Query: 487 ----DRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEP 523
D S ++I+ L KV A ++ + G +P P
Sbjct: 434 AILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGP 474
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 90/426 (21%), Positives = 175/426 (41%), Gaps = 36/426 (8%)
Query: 185 KMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQV 244
K + D A+ LIE++ + +T ++I + + +A F +R G
Sbjct: 260 KWGQVDKAFELIEMLEERDIR---LNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNA 316
Query: 245 GIDEFQGLLSALCRYKNVQDAEHL-LFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERV 303
I + L+ LC++K+++ A L L ++ P + +L + +R E +
Sbjct: 317 DIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVI 376
Query: 304 WHEMSKRGIQ----------------HDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKI 347
++ K+ + H+ S+ + +S + ++ +L NK I
Sbjct: 377 IGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKD-HNKAI 435
Query: 348 TPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKE 407
PD + VI+ L K V AV LL + +N + P + YN++I+ +CK + +E+ +
Sbjct: 436 LPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLK 495
Query: 408 VFNDMMKRNITPTIRTFHAFFRILRVEEE---VFELLDKMRELGCYPTIETYIMLIRKFC 464
+ +M + P+ T + + L + +LL KMR G P I+ L++K C
Sbjct: 496 LLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLC 555
Query: 465 RWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPK 524
+ + K + + +G + I GL N V + + ++ G P+
Sbjct: 556 ENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVI 615
Query: 525 TEQMLQAWLSGRQGTEGQVTDLEHNQLEDDTVEKKVKATPSKFDKE-KAFLREPETRRVT 583
+L L T +E + L ++ V K +K T + ++ + +E E
Sbjct: 616 AYHVLIKALCKACRT------MEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEI---- 665
Query: 584 RDRGFS 589
DRG S
Sbjct: 666 -DRGLS 670
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 112/280 (40%), Gaps = 9/280 (3%)
Query: 283 FNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQM 342
+N I+ G C S E+ ++ EM G++ + I C ++ L +M
Sbjct: 477 YNNIIEGMCKEGRS-EESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKM 535
Query: 343 KNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKI 402
+ P K ++ L + +A L + +V + I L KN +
Sbjct: 536 RFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGV 595
Query: 403 DEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFE---LLDKMRELGCYPTIETYIML 459
D E+F D+ P + +H + L E L ++M G PT+ TY +
Sbjct: 596 DRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSM 655
Query: 460 IRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGF 519
I +C+ ++D M ED + D +Y LIHGL +G+ EA + EM+ K
Sbjct: 656 IDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDC 715
Query: 520 LPEPKTEQMLQAWLSGRQGTEGQVT----DLEHNQLEDDT 555
P T L L + G G+ ++E ++E D+
Sbjct: 716 YPNRITFMALIQGLC-KCGWSGEALVYFREMEEKEMEPDS 754
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 133/360 (36%), Gaps = 43/360 (11%)
Query: 166 QPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVR 225
Q G Y+++I + K + + + L+ M+ G PS T + + + C
Sbjct: 467 QNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERC--- 523
Query: 226 DVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNI 285
D A++ + +GF+ I L+ LC
Sbjct: 524 DFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCE--------------------------- 556
Query: 286 ILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNK 345
NG A +A + +++ G +V+ + + K+ + + +LF +
Sbjct: 557 --NG------RAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICAN 608
Query: 346 KITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEA 405
PD Y+ +I AL K EA L M + P V TYNS+I CK +ID
Sbjct: 609 GHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRG 668
Query: 406 KEVFNDMMKRNITPTIRTF----HAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIR 461
M + P + T+ H R E +F ++M+ CYP T++ LI+
Sbjct: 669 LSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRW-NEMKGKDCYPNRITFMALIQ 727
Query: 462 KFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
C+ E + M E + D + Y+ L+ + + + EM KG P
Sbjct: 728 GLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 159/356 (44%), Gaps = 44/356 (12%)
Query: 165 KQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAV 224
+ G+ SV ++ + L + + D W + + M G ++ T ++I +C
Sbjct: 175 RAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENV---NTFNLVIYSFCKE 231
Query: 225 RDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL----FCNKNVFPLEI 280
+ A++ FY + G + F ++ C+ +++ A LL + N
Sbjct: 232 SKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNA 291
Query: 281 KSFNIILNGWCNLIVSARE--AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQL 338
++N ++NG+C + R AER+ +M K G+ + +Y +++ Y ++ + +L
Sbjct: 292 VTYNSVINGFCK---AGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRL 348
Query: 339 FDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCK 398
D+M +K + + +YN++++ L ++ A+++L+ M N+ D T +++ LC+
Sbjct: 349 CDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCR 408
Query: 399 NRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIM 458
N + EA E +R I+ E+++ E ++ C+ T
Sbjct: 409 NGYVKEAVE-----FQRQIS---------------EKKLVE------DIVCHNT------ 436
Query: 459 LIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEM 514
L+ F R +KL +I M G+S D S+ LI G GK++ A + Y M
Sbjct: 437 LMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGM 492
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 108/234 (46%), Gaps = 9/234 (3%)
Query: 285 IILNGWC-NLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMK 343
I++ G C N V +EA ++S++ + D+V + ++M + + KL Q+ M
Sbjct: 401 IVVRGLCRNGYV--KEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSML 458
Query: 344 NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKID 403
+ ++ D + +I K ++ A+ + M K N T ++V YNS++ L K
Sbjct: 459 VQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAG 518
Query: 404 EAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIE--TYIMLIR 461
A+ V N M ++I + + V EE ++L KM++ ++ T+ ++I
Sbjct: 519 AAEAVVNAMEIKDIVTYNTLLNESLKTGNV-EEADDILSKMQKQDGEKSVSLVTFNIMIN 577
Query: 462 KFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLN---GKVKEAHDYYI 512
C++ ++ ++ M E GV D +Y LI + KV E HDY I
Sbjct: 578 HLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLI 631
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 95/252 (37%), Gaps = 33/252 (13%)
Query: 297 AREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNA 356
A+ A V + G V + + M C +++ + ++++ +M + + +N
Sbjct: 164 AQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNL 223
Query: 357 VIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFN--DMMK 414
VI++ K + EA+++ M K V P+VV++N +I CK + A ++ MM
Sbjct: 224 VIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMS 283
Query: 415 RNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFK 474
N P TY +I FC+ +LD +
Sbjct: 284 GNFVS-------------------------------PNAVTYNSVINGFCKAGRLDLAER 312
Query: 475 IWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLS 534
I M + GV + +Y L+ G EA EM KG + + WL
Sbjct: 313 IRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLF 372
Query: 535 GRQGTEGQVTDL 546
EG ++ L
Sbjct: 373 MEGDIEGAMSVL 384
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 111/256 (43%), Gaps = 15/256 (5%)
Query: 270 FCNKNVFPLEIKSFNI---ILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCY 326
F +K + L + +NI IL C R + +W EM ++GI+ +Y +++ Y
Sbjct: 177 FKSKGCYELNVIHYNIMLRILGKACKW----RYVQSLWDEMIRKGIKPINSTYGTLIDVY 232
Query: 327 SKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQ--TMEKNNVTP 384
SK +M + PD V+ K R ++A + + ++N
Sbjct: 233 SKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADS 292
Query: 385 DVV----TYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFEL 440
V TYN++I K+ +I EA E F M++ I PT TF+ I ++ E+
Sbjct: 293 HVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEV 352
Query: 441 LDKMR--ELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGL 498
M+ +L C P TY +LI + ++ + M++DG+ D SY L++
Sbjct: 353 TSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAF 412
Query: 499 FLNGKVKEAHDYYIEM 514
+ V+EA EM
Sbjct: 413 SIRHMVEEAEGLIAEM 428
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 119/239 (49%), Gaps = 15/239 (6%)
Query: 305 HEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKG 364
+M + G D + Y +++S + K +L +++ +M I PD VY +I+A A
Sbjct: 564 EKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADT 623
Query: 365 RLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMK---RNITPTI 421
V++A++ ++ M++ + + V YNSLIK K +DEA+ ++ +++ + P +
Sbjct: 624 GNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDV 683
Query: 422 RTFHAFFRI------LRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKI 475
T + + +R E +F+ + + E + T+ M++ + + + +E +I
Sbjct: 684 YTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEF----TFAMMLCMYKKNGRFEEATQI 739
Query: 476 WNMMREDGVSHDRSSYIVLIHGLF-LNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWL 533
MRE + D SY ++ GLF L+G+ KEA + + EM G P+ T + L L
Sbjct: 740 AKQMREMKILTDPLSYNSVL-GLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTIL 797
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 12/185 (6%)
Query: 299 EAERVW---HEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYN 355
EAERV+ E++KR V+ Y ++ Y S K +LF+ M + +TPD+ YN
Sbjct: 489 EAERVFICCQEVNKR----TVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYN 544
Query: 356 AVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKR 415
++ LA + + L+ M + D + Y ++I K +++ A+EV+ +M++
Sbjct: 545 TLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEY 604
Query: 416 NITPTIRTF----HAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDE 471
NI P + + +AF V ++ ++ M+E G Y LI+ + + LDE
Sbjct: 605 NIEPDVVVYGVLINAFADTGNV-QQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDE 663
Query: 472 VFKIW 476
I+
Sbjct: 664 AEAIY 668
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 124/280 (44%), Gaps = 15/280 (5%)
Query: 160 FLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIR 219
+L ++ GY Y ++IS K+ + + A + + M P +V ++I
Sbjct: 562 YLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYG---VLIN 618
Query: 220 KYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEH-----LLFCNKN 274
+ +V +A++ A K G + L+ + + +AE L CNK
Sbjct: 619 AFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKT 678
Query: 275 VFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYK 334
+P ++ + N ++N + + R+AE ++ M +RG + + ++A ++ Y K+ + +
Sbjct: 679 QYP-DVYTSNCMINLYSERSM-VRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEE 735
Query: 335 VFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIK 394
Q+ QM+ KI D YN+V+ A KEAV + M + + PD T+ SL
Sbjct: 736 ATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGT 795
Query: 395 PLCK----NRKIDEAKEVFNDMMKRNITPTIRTFHAFFRI 430
L K + + + +E+ +KR + I T + I
Sbjct: 796 ILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLVGI 835
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 81/417 (19%), Positives = 159/417 (38%), Gaps = 56/417 (13%)
Query: 153 WEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQ 212
WE A F W + Y +V Y+ M+ ILGK K+ +L + M G P T
Sbjct: 167 WERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYG 226
Query: 213 TLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--- 269
TL I Y A+ + G Q +L + + Q AE
Sbjct: 227 TL---IDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKW 283
Query: 270 FCNKNV----FPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSC 325
C++N L ++N +++ + +EA + M + GI V++ +++
Sbjct: 284 SCDENKADSHVCLSSYTYNTMIDTY-GKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHI 342
Query: 326 YSKSSKLYKVFQL----------------------------------FDQMKNKKITPDR 351
Y + +L +V L F +MK+ + PD
Sbjct: 343 YGNNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDP 402
Query: 352 KVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVF-- 409
Y +++A + +V+EA L+ M+ +NV D T ++L + + ++++ F
Sbjct: 403 VSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKR 462
Query: 410 ----NDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCR 465
+M + I + L E VF ++ + T+ Y ++I+ +
Sbjct: 463 FHVAGNMSSEGYSANIDAYGE-RGYLSEAERVFICCQEVNK----RTVIEYNVMIKAYGI 517
Query: 466 WRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
+ ++ +++ M GV+ D+ +Y L+ L + Y +M+ G++ +
Sbjct: 518 SKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSD 574
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 151/361 (41%), Gaps = 24/361 (6%)
Query: 164 GKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCA 223
G + + S+ Y+ +++ L + + A L+ MR G P +VT TL I YC
Sbjct: 153 GFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTL---IGGYCE 209
Query: 224 VRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL------FCNKNVFP 277
+R++ A F + G + L+ + ++V+ L+ N+
Sbjct: 210 IRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTS 269
Query: 278 LEIKSFNIILNGWCNLIVSAREAE-----RVWHEMSKRGIQHDVVSYASIMSCYSKSSKL 332
++ +F +++ C RE + MS + +Y ++ + +
Sbjct: 270 MKAAAFANLVDSMC------REGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRN 323
Query: 333 YKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSL 392
+ ++ MK+K + P R YNA+IH L K A LL+ + P TY L
Sbjct: 324 HGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLL 383
Query: 393 IKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEE---EVFELLDKMRELGC 449
++ LCK +A+ V M+++ R ++ + R L V + E+ +L M + C
Sbjct: 384 MESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDC 443
Query: 450 YPTIETYIMLIRKFCRWRKLDEVFKIW-NMMREDGVSHDRSSYIVLIHGLFLNGKVKEAH 508
P T +I C+ ++D+ K+ +MM + D + ++ GL G+ +EA
Sbjct: 444 RPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEAL 503
Query: 509 D 509
D
Sbjct: 504 D 504
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 169/405 (41%), Gaps = 44/405 (10%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y MI L + R+ A ++ +M+ G P + + I C RA
Sbjct: 310 YGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAI---IHGLCKDGGCMRAYQLLE 366
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKS--------FNIIL 287
F F ++ L+ +LC+ + A +NV L ++ +NI L
Sbjct: 367 EGSEFEFFPSEYTYKLLMESLCKELDTGKA-------RNVLELMLRKEGADRTRIYNIYL 419
Query: 288 NGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKK- 346
G C ++ + E V M + + D + ++++ K ++ ++ D M K
Sbjct: 420 RGLC-VMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKF 478
Query: 347 ITPDRKVYNAVIHAL-AKGRLVKEAVNLL-QTMEKNNVTPDVVTYNSLIKPLCKNRKIDE 404
PD N V+ L A+GR +EA+++L + M +N + P VV YN++I+ L K K DE
Sbjct: 479 CAPDAVTLNTVMCGLLAQGR-AEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDE 537
Query: 405 AKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIE----TYIMLI 460
A VF + K ++T T+ L V +V ++ K + +P+ Y +
Sbjct: 538 AMSVFGQLEKASVTADSTTYAIIIDGLCVTNKV-DMAKKFWDDVIWPSGRHDAFVYAAFL 596
Query: 461 RKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFL 520
+ C+ L + + + G + Y +I +G +EA+ EM++ G
Sbjct: 597 KGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQA 656
Query: 521 PEPKTEQMLQAWLSGRQGTEGQVTDLEHNQLEDDTVEKKVKATPS 565
P+ T W ++ D H+ + D TVE+++ + P+
Sbjct: 657 PDAVT------W---------RILDKLHDSM-DLTVERELISNPA 685
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 147/355 (41%), Gaps = 21/355 (5%)
Query: 150 RNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLV 209
RN A + + K G Y+++I L K A+ L+E G
Sbjct: 322 RNHGAARIVYIM---KSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLE---EGSEFEFFP 375
Query: 210 TPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDE---FQGLLSALCRYKNVQDAE 266
+ T +++ C D G+A N R + G D + L LC N +
Sbjct: 376 SEYTYKLLMESLCKELDTGKARNVLELMLR---KEGADRTRIYNIYLRGLCVMDNPTEIL 432
Query: 267 HLL--FCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEM-SKRGIQHDVVSYASIM 323
++L + P E + N ++NG C + +A +V +M + + D V+ ++M
Sbjct: 433 NVLVSMLQGDCRPDEY-TLNTVINGLCKM-GRVDDAMKVLDDMMTGKFCAPDAVTLNTVM 490
Query: 324 SCYSKSSKLYKVFQLFDQ-MKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNV 382
+ + + ++ M KI P YNAVI L K EA+++ +EK +V
Sbjct: 491 CGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASV 550
Query: 383 TPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFE 439
T D TY +I LC K+D AK+ ++D++ + + AF + L +
Sbjct: 551 TADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACH 610
Query: 440 LLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVL 494
L + + G P + Y +I + R E ++I MR++G + D ++ +L
Sbjct: 611 FLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 110/273 (40%), Gaps = 38/273 (13%)
Query: 267 HLLFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCY 326
H L K F + ++N ++N C I +A ++ +M RG DVV++ +++ Y
Sbjct: 149 HRLIGFKKEFVPSLTNYNRLMNQLCT-IYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGY 207
Query: 327 SKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTM-----EKNN 381
+ +L ++FD+M+ I P+ + +I K R V+ L++ + + +
Sbjct: 208 CEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETD 267
Query: 382 VTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELL 441
+ + +L+ +C+ + FND +FE+
Sbjct: 268 TSMKAAAFANLVDSMCR-------EGYFND-------------------------IFEIA 295
Query: 442 DKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLN 501
+ M Y +I CR+R+ +I +M+ G+ R+SY +IHGL +
Sbjct: 296 ENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKD 355
Query: 502 GKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLS 534
G A+ E F P T ++L L
Sbjct: 356 GGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLC 388
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 126/251 (50%), Gaps = 13/251 (5%)
Query: 247 DEFQGLLSALCRYKNVQDAEHLL--FCNKNVFP--LEIKSFNIILNGWCNLIVSAREAER 302
D + L+ A C ++ AE +L N +V P + + +N + G + EA
Sbjct: 191 DTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAID 250
Query: 303 VWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALA 362
V+ M + + +Y +++ Y K+SK Y ++L+ +M++ + P+ Y A+++A A
Sbjct: 251 VFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFA 310
Query: 363 KGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIR 422
+ L ++A + + ++++ + PDV YN+L++ + A E+F+ M P
Sbjct: 311 REGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRA 370
Query: 423 TFH----AFFR--ILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIW 476
+++ A+ R + E VFE +M+ LG PT++++++L+ + + R + + I
Sbjct: 371 SYNIMVDAYGRAGLHSDAEAVFE---EMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIV 427
Query: 477 NMMREDGVSHD 487
M E+GV D
Sbjct: 428 KEMSENGVEPD 438
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 123/294 (41%), Gaps = 45/294 (15%)
Query: 307 MSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRL 366
+ K Q DV+ + ++ Y + + + L+ Q+ + P Y +I A L
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 367 VKEAVNLLQTMEKNNVTP---DVVTYNSLIKPLCKNR-KIDEAKEVFNDMMKRNITPTIR 422
++ A +L M+ ++V+P V YN+ I+ L K + +EA +VF M + PT
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 423 TFHAFFRILRVEEEVF---ELLDKMRELGCYPTIETYIMLIRKFCR---WRKLDEVF--- 473
T++ + + + +L +MR C P I TY L+ F R K +E+F
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 325
Query: 474 -----------------------------KIWNMMREDGVSHDRSSYIVLIHGLFLNGKV 504
+I+++M+ G DR+SY +++ G
Sbjct: 326 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 385
Query: 505 KEAHDYYIEMQRKGFLPEPKTEQ-MLQAWLSGRQGT--EGQVTDLEHNQLEDDT 555
+A + EM+R G P K+ +L A+ R T E V ++ N +E DT
Sbjct: 386 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDT 439
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 116/253 (45%), Gaps = 4/253 (1%)
Query: 297 AREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNA 356
+AE ++ ++ + G++ DV Y ++M YS++ Y ++F M++ PDR YN
Sbjct: 315 CEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNI 374
Query: 357 VIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRN 416
++ A + L +A + + M++ + P + ++ L+ K R + + + + +M +
Sbjct: 375 MVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENG 434
Query: 417 ITPTIRTFHAFFRI---LRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVF 473
+ P ++ + L ++ ++L +M C I TY +LI + + L+ +
Sbjct: 435 VEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIE 494
Query: 474 KIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWL 533
+++ ++E D ++ I + + + EM G P+ T ++L +
Sbjct: 495 ELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSAC 554
Query: 534 SGRQGTEGQVTDL 546
S + E QVT +
Sbjct: 555 SSEEQVE-QVTSV 566
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 122/312 (39%), Gaps = 40/312 (12%)
Query: 172 SVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAI 231
+ Y+ MI++ GK K +W L MR P++ T L + + +A
Sbjct: 263 TTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTAL---VNAFAREGLCEKAE 319
Query: 232 NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHL--LFCNKNVFPLEIKSFNIILNG 289
F + G + + + L+ + R A + L + P + S+NI+++
Sbjct: 320 EIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP-DRASYNIMVDA 378
Query: 290 WCN---------------------------LIVSA-------REAERVWHEMSKRGIQHD 315
+ L++SA + E + EMS+ G++ D
Sbjct: 379 YGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 438
Query: 316 VVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQ 375
S+++ Y + + K+ ++ +M+N T D YN +I+ K ++ L
Sbjct: 439 TFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFV 498
Query: 376 TMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEE 435
+++ N PDVVT+ S I + + + EVF +M+ P T EE
Sbjct: 499 ELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEE 558
Query: 436 EVFELLDKMREL 447
+V ++ +R +
Sbjct: 559 QVEQVTSVLRTM 570
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 121/221 (54%), Gaps = 25/221 (11%)
Query: 300 AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIH 359
AE ++ EM +R +VVS+ +++ Y++S ++ K +LFD+M + I +N+++
Sbjct: 128 AEMLFQEMPER----NVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVS----WNSMVK 179
Query: 360 ALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITP 419
AL + + EA+NL + M + DVV++ +++ L KN K+DEA+ +F+ M +RNI
Sbjct: 180 ALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIIS 235
Query: 420 TIRTFHAFFRILRVEE--EVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWN 477
+ + R++E ++F+++ + R+ + T +I F R R++++ +++
Sbjct: 236 WNAMITGYAQNNRIDEADQLFQVMPE-RDFASWNT------MITGFIRNREMNKACGLFD 288
Query: 478 MMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKG 518
M E V S+ +I G N + +EA + + +M R G
Sbjct: 289 RMPEKNV----ISWTTMITGYVENKENEEALNVFSKMLRDG 325
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 313 QHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVN 372
+ DVV++ +++ Y K + + +LFD++ ++K + + A++ + + + A
Sbjct: 74 ERDVVTWTHVITGYIKLGDMREARELFDRVDSRK---NVVTWTAMVSGYLRSKQLSIAEM 130
Query: 373 LLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILR 432
L Q M + NV V++N++I ++ +ID+A E+F++M +RNI A + R
Sbjct: 131 LFQEMPERNV----VSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGR 186
Query: 433 VEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYI 492
+ +E L ++M + ++ ++ + K+DE ++++ M E + S+
Sbjct: 187 I-DEAMNLFERMPR----RDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI----ISWN 237
Query: 493 VLIHGLFLNGKVKEAHDYYIEMQRKGF 519
+I G N ++ EA + M + F
Sbjct: 238 AMITGYAQNNRIDEADQLFQVMPERDF 264
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 5/224 (2%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
EA V++ + GI VV+ S++ K+ KL + ++L +M + +R +I
Sbjct: 163 EAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSER--IRCLI 220
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
AL G V E LL+ K + P Y LI C+ EV + M+ N
Sbjct: 221 RALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHF 280
Query: 419 PTIRTFHAFFRILRVEE---EVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKI 475
P++ + + L + + E + + +++ G P Y +IR FC L K+
Sbjct: 281 PSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKL 340
Query: 476 WNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGF 519
W M + G+ + +Y V+IHG F G++ +Y EM R G+
Sbjct: 341 WFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGY 384
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 130/306 (42%), Gaps = 20/306 (6%)
Query: 165 KQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAV 224
K G + SV +S++ K RK D W L + M S + + +IR C
Sbjct: 172 KDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMV-----ESEFDSERIRCLIRALCDG 226
Query: 225 RDVGRAINTFYAFKRFGFQVGIDEFQ----GLLSALCRYKNVQDAEHLL--FCNKNVFPL 278
DV Y + G + G+D Q L+S C N +L N FP
Sbjct: 227 GDVSEG----YELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFP- 281
Query: 279 EIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQL 338
+ + I+ G C + EA ++ + +G D V Y +++ + + L +L
Sbjct: 282 SMYIYQKIIKGLC-MNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKL 340
Query: 339 FDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCK 398
+ +M K + P+ YN +IH K + M +N +++ N++IK C
Sbjct: 341 WFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCS 400
Query: 399 NRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEV---FELLDKMRELGCYPTIET 455
+ K DEA E+F +M + +TP T++A + E +V +L +++ LG P+
Sbjct: 401 HGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMA 460
Query: 456 YIMLIR 461
Y L+R
Sbjct: 461 YAALVR 466
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 138/322 (42%), Gaps = 16/322 (4%)
Query: 190 DTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDE- 248
+ A + V++ G S+VT ++L+ K R ++ F+ + + D
Sbjct: 162 EEAIEVYNVLKDMGISSSVVTCNSVLLGCLK-------ARKLDRFWELHKEMVESEFDSE 214
Query: 249 -FQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWH 305
+ L+ ALC +V + LL + + P + + +++G+C + A +E V H
Sbjct: 215 RIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQY-VYAKLISGFCEIGNYACMSE-VLH 272
Query: 306 EMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGR 365
M + Y I+ + K + + +F +K+K PDR VY +I +
Sbjct: 273 TMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKG 332
Query: 366 LVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFH 425
+ A L M K + P+ YN +I K +I + +N+M++ T+ + +
Sbjct: 333 WLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCN 392
Query: 426 AFFRILRV---EEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMRED 482
+ +E FE+ M E G P TY LI+ FC+ K+++ K++ ++
Sbjct: 393 TMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKAL 452
Query: 483 GVSHDRSSYIVLIHGLFLNGKV 504
G+ +Y L+ L ++ V
Sbjct: 453 GLKPSGMAYAALVRNLKMSDSV 474
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 7/218 (3%)
Query: 309 KRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVK 368
K+G+ YA ++S + + + ++ M P +Y +I L +
Sbjct: 241 KQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQL 300
Query: 369 EAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTF---- 424
EA + + ++ PD V Y ++I+ C+ + A++++ +M+K+ + P +
Sbjct: 301 EAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMI 360
Query: 425 HAFFRILRVEEEVFE-LLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDG 483
H F+ R E + E ++M G T+ + +I+ FC K DE F+I+ M E G
Sbjct: 361 HGHFK--RGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETG 418
Query: 484 VSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
V+ + +Y LI G KV++ Y E++ G P
Sbjct: 419 VTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKP 456
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 81/209 (38%), Gaps = 36/209 (17%)
Query: 349 PDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNS----------------- 391
P+ + + L++ LV+EA+ + ++ ++ VVT NS
Sbjct: 143 PEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWEL 202
Query: 392 ----------------LIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAF---FRILR 432
LI+ LC + E E+ +K+ + P + F +
Sbjct: 203 HKEMVESEFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIG 262
Query: 433 VEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYI 492
+ E+L M +P++ Y +I+ C +K E + I+ +++ G + DR Y
Sbjct: 263 NYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYT 322
Query: 493 VLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
+I G G + A + EM +KG P
Sbjct: 323 TMIRGFCEKGWLGSARKLWFEMIKKGMRP 351
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 126/251 (50%), Gaps = 13/251 (5%)
Query: 247 DEFQGLLSALCRYKNVQDAEHLL--FCNKNVFP--LEIKSFNIILNGWCNLIVSAREAER 302
D + L+ A C ++ AE +L N +V P + + +N + G + EA
Sbjct: 213 DTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAID 272
Query: 303 VWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALA 362
V+ M + + +Y +++ Y K+SK Y ++L+ +M++ + P+ Y A+++A A
Sbjct: 273 VFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFA 332
Query: 363 KGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIR 422
+ L ++A + + ++++ + PDV YN+L++ + A E+F+ M P
Sbjct: 333 REGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRA 392
Query: 423 TFH----AFFR--ILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIW 476
+++ A+ R + E VFE +M+ LG PT++++++L+ + + R + + I
Sbjct: 393 SYNIMVDAYGRAGLHSDAEAVFE---EMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIV 449
Query: 477 NMMREDGVSHD 487
M E+GV D
Sbjct: 450 KEMSENGVEPD 460
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 123/294 (41%), Gaps = 45/294 (15%)
Query: 307 MSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRL 366
+ K Q DV+ + ++ Y + + + L+ Q+ + P Y +I A L
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 367 VKEAVNLLQTMEKNNVTP---DVVTYNSLIKPLCKNR-KIDEAKEVFNDMMKRNITPTIR 422
++ A +L M+ ++V+P V YN+ I+ L K + +EA +VF M + PT
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 423 TFHAFFRILRVEEEVF---ELLDKMRELGCYPTIETYIMLIRKFCR---WRKLDEVF--- 473
T++ + + + +L +MR C P I TY L+ F R K +E+F
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 347
Query: 474 -----------------------------KIWNMMREDGVSHDRSSYIVLIHGLFLNGKV 504
+I+++M+ G DR+SY +++ G
Sbjct: 348 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 407
Query: 505 KEAHDYYIEMQRKGFLPEPKTEQ-MLQAWLSGRQGT--EGQVTDLEHNQLEDDT 555
+A + EM+R G P K+ +L A+ R T E V ++ N +E DT
Sbjct: 408 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDT 461
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 116/253 (45%), Gaps = 4/253 (1%)
Query: 297 AREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNA 356
+AE ++ ++ + G++ DV Y ++M YS++ Y ++F M++ PDR YN
Sbjct: 337 CEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNI 396
Query: 357 VIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRN 416
++ A + L +A + + M++ + P + ++ L+ K R + + + + +M +
Sbjct: 397 MVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENG 456
Query: 417 ITPTIRTFHAFFRI---LRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVF 473
+ P ++ + L ++ ++L +M C I TY +LI + + L+ +
Sbjct: 457 VEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIE 516
Query: 474 KIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWL 533
+++ ++E D ++ I + + + EM G P+ T ++L +
Sbjct: 517 ELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSAC 576
Query: 534 SGRQGTEGQVTDL 546
S + E QVT +
Sbjct: 577 SSEEQVE-QVTSV 588
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 69/149 (46%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
+ E + EMS+ G++ D S+++ Y + + K+ ++ +M+N T D YN +I
Sbjct: 444 KCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILI 503
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
+ K ++ L +++ N PDVVT+ S I + + + EVF +M+
Sbjct: 504 NIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCA 563
Query: 419 PTIRTFHAFFRILRVEEEVFELLDKMREL 447
P T EE+V ++ +R +
Sbjct: 564 PDGGTAKVLLSACSSEEQVEQVTSVLRTM 592
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 165/430 (38%), Gaps = 69/430 (16%)
Query: 156 AFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIE-VMRGGGTGPSLV----- 209
A +FF W+ H ++ Y I IL K R A LIE + LV
Sbjct: 96 ALSFFHWSSHTRNLRHGIKSYALTIHILVKARLLIDARALIESSLLNSPPDSDLVDSLLD 155
Query: 210 -------TPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGL---------- 252
TP ++++ Y +R + + F GF + + L
Sbjct: 156 TYEISSSTPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKID 215
Query: 253 -------------------------LSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNI 285
+ LC+ +++ LL C K P ++
Sbjct: 216 DLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLP------SV 269
Query: 286 ILNGWCNLIVSAREAERVWHEMS------KRGIQHDVVSYASIMSCYSKSSKLYKVFQLF 339
I+N +L+ E R+ MS + + D + Y+ ++ +K L ++F
Sbjct: 270 IVNT--SLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVF 327
Query: 340 DQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKN 399
D+M + + + VY + + VKEA LL ME++ V+P T+N LI +
Sbjct: 328 DEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARF 387
Query: 400 RKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEV---FELLDKMRELGCYPTIETY 456
++ E M+ R + P+ F+ + + E V E+L K + G P TY
Sbjct: 388 GWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTY 447
Query: 457 IMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQR 516
LIR F +D+ K++ M +S + LI GL GKV EA + Y+++ +
Sbjct: 448 SHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKV-EAGEKYLKIMK 506
Query: 517 KGFLPEPKTE 526
K + EP +
Sbjct: 507 KRLI-EPNAD 515
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 85/206 (41%), Gaps = 4/206 (1%)
Query: 226 DVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSF 283
D+ A F + GF + + C +V++AE LL V P + ++F
Sbjct: 319 DLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYD-ETF 377
Query: 284 NIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMK 343
N ++ G+ + E M RG+ ++ ++ SK + + ++ +
Sbjct: 378 NCLIGGFARFGWEEKGLEYC-EVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSI 436
Query: 344 NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKID 403
+K PD Y+ +I +G + +A+ L ME ++P + SLI LC K++
Sbjct: 437 DKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVE 496
Query: 404 EAKEVFNDMMKRNITPTIRTFHAFFR 429
++ M KR I P + A +
Sbjct: 497 AGEKYLKIMKKRLIEPNADIYDALIK 522
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 149/341 (43%), Gaps = 12/341 (3%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLL-IMIRKYCAVRDVGRAINTF 234
Y +I L K + + N+ V+ TP+++ +I Y + AI F
Sbjct: 75 YRFVIKTLAKSSQLE---NISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIEVF 131
Query: 235 YAFKRFGFQVGIDEFQGLLSALCRYKNVQD--AEHLLFCNKNVFPLEIKSFNIILNGWCN 292
+ F LL L R + + E L+ + LE +F I+++ C
Sbjct: 132 FKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALCR 191
Query: 293 LIVSAREAERVWHEMSKRGIQHDVVSYASIMS--CYSKSSKLYKVFQLFDQMKNKKITPD 350
I A + MS+ + D Y+ ++S C K S + V + ++ + +P
Sbjct: 192 -IGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPG 250
Query: 351 RKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFN 410
+ Y V+ L +G KE V++L M+ + V PD+V Y +++ + + +A ++F+
Sbjct: 251 LRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFD 310
Query: 411 DMMKRNITPTIRTFHAFFRILRVEEEV---FELLDKMRELGCYPTIETYIMLIRKFCRWR 467
+++ + P + T++ + L + ++ +++ M +LG P + TY +LI+ +
Sbjct: 311 ELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAG 370
Query: 468 KLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAH 508
L +W M +GV+ + ++ ++I +V AH
Sbjct: 371 DLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAH 411
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 105/223 (47%), Gaps = 5/223 (2%)
Query: 304 WHE-MSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALA 362
W E MS G + D V+ A+++ Y ++ + L+D+ + +K D ++ +I
Sbjct: 232 WFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYG 291
Query: 363 KGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIR 422
+N+ + M+ V P++V YN LI + + ++ +AK ++ D++ TP
Sbjct: 292 VSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWS 351
Query: 423 TFHAFFRI---LRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMM 479
T+ A R R ++ + +M+E G T+ Y L+ R +DE F+I+ M
Sbjct: 352 TYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDM 411
Query: 480 RE-DGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
+ + D ++ LI +G+V EA ++M+ GF P
Sbjct: 412 KNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEP 454
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 143/318 (44%), Gaps = 11/318 (3%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y+ + + K + + + L + M G P T T++ R+ + RA+ F
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPK---RAVEWFE 234
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF-CNKNVFPLEIKSFNIILNGWCNLI 294
FG + ++ A R NV A L + ++ +F+ ++ + +
Sbjct: 235 KMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIY-GVS 293
Query: 295 VSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVY 354
+ ++ EM G++ ++V Y ++ ++ + ++ ++ + TP+ Y
Sbjct: 294 GNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTY 353
Query: 355 NAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMK 414
A++ A + R +A+ + + M++ ++ V+ YN+L+ NR +DEA E+F DM
Sbjct: 354 AALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKN 413
Query: 415 -RNITPTIRTFHAFFRIL----RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKL 469
P TF + + RV E LL +MRE G PT+ +I+ + + +++
Sbjct: 414 CETCDPDSWTFSSLITVYACSGRVSEAEAALL-QMREAGFEPTLFVLTSVIQCYGKAKQV 472
Query: 470 DEVFKIWNMMREDGVSHD 487
D+V + ++ + E G++ D
Sbjct: 473 DDVVRTFDQVLELGITPD 490
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 101/220 (45%), Gaps = 3/220 (1%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
++E+++ EM +RGI+ D ++ +I+SC ++ + + F++M + PD A+I
Sbjct: 193 KSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMI 252
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
A + V A++L D VT+++LI+ + D ++ +M +
Sbjct: 253 DAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVK 312
Query: 419 PTIRTFHAFFRILRVEEEVFELLDKMREL---GCYPTIETYIMLIRKFCRWRKLDEVFKI 475
P + ++ + + ++ ++L G P TY L+R + R R D+ I
Sbjct: 313 PNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAI 372
Query: 476 WNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQ 515
+ M+E G+S Y L+ N V EA + + +M+
Sbjct: 373 YREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMK 412
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 86/208 (41%), Gaps = 3/208 (1%)
Query: 315 DVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLL 374
+V+ Y M + KS L K +LFD+M + I PD + +I + + K AV
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWF 233
Query: 375 QTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE 434
+ M PD VT ++I + +D A +++ TF RI V
Sbjct: 234 EKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVS 293
Query: 435 ---EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSY 491
+ + ++M+ LG P + Y LI R ++ + I+ + +G + + S+Y
Sbjct: 294 GNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTY 353
Query: 492 IVLIHGLFLNGKVKEAHDYYIEMQRKGF 519
L+ +A Y EM+ KG
Sbjct: 354 AALVRAYGRARYGDDALAIYREMKEKGL 381
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 372 NLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL 431
NLL+TM+ + +V+ YN +K K++ +++++++F++M++R I P TF
Sbjct: 164 NLLETMKPSR---EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCA 220
Query: 432 R---VEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDR 488
R V + E +KM GC P T +I + R +D +++ R + D
Sbjct: 221 RQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDA 280
Query: 489 SSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
++ LI ++G + Y EM+ G P
Sbjct: 281 VTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKP 313
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 115/280 (41%), Gaps = 32/280 (11%)
Query: 178 SMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAF 237
+MI G+ D A +L + R T + T +IR Y + +N +
Sbjct: 250 AMIDAYGRAGNVDMALSLYDRAR---TEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEM 306
Query: 238 KRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIILNG----WCNL 293
K G + + + L+ ++ R K A+ I ++I NG W
Sbjct: 307 KALGVKPNLVIYNRLIDSMGRAKRPWQAK-------------IIYKDLITNGFTPNWSTY 353
Query: 294 IVSAR---------EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKN 344
R +A ++ EM ++G+ V+ Y +++S + + + + F++F MKN
Sbjct: 354 AALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKN 413
Query: 345 -KKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKID 403
+ PD ++++I A V EA L M + P + S+I+ K +++D
Sbjct: 414 CETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVD 473
Query: 404 EAKEVFNDMMKRNITPTIRTFHAFFRIL--RVEEEVFELL 441
+ F+ +++ ITP R ++ EE+ +L+
Sbjct: 474 DVVRTFDQVLELGITPDDRFCGCLLNVMTQTPSEEIGKLI 513
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 107/209 (51%), Gaps = 6/209 (2%)
Query: 316 VVSYASIM-SCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLL 374
VVS+ +I+ S SK +L ++M++K + P R+ +NAV+ A +K A+ +
Sbjct: 422 VVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIF 481
Query: 375 QTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE 434
+ M N P V++Y +L+ L K + DEA V+N M+K I P + + +L +
Sbjct: 482 KAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQ 541
Query: 435 EEVFELLD----KMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSS 490
++ F LLD +M G P++ T+ +I R ++ ++ M+ + V + +
Sbjct: 542 QK-FNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEIT 600
Query: 491 YIVLIHGLFLNGKVKEAHDYYIEMQRKGF 519
Y +LI L + K + A++ +++ Q +G
Sbjct: 601 YEMLIEALANDAKPRLAYELHVKAQNEGL 629
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 107/257 (41%), Gaps = 11/257 (4%)
Query: 272 NKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSK 331
N + L + FNI+L+ + R R+ ++M +G++ + +++ SK+S+
Sbjct: 415 NNLSYELVVSHFNILLSAASKRGI-WRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASE 473
Query: 332 LYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNS 391
Q+F M + P Y A++ AL KG+L EA + M K + P++ Y +
Sbjct: 474 TTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTT 533
Query: 392 LIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILR---VEEEVFELLDKMRELG 448
+ L +K + + +M + I P++ TF+A + +E +M+
Sbjct: 534 MASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSEN 593
Query: 449 CYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAH 508
P TY MLI K +++ + +G+ Y ++ K E +
Sbjct: 594 VEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVV-------KSAETY 646
Query: 509 DYYIEMQRKGFLPEPKT 525
I++ G P+ K
Sbjct: 647 GATIDLNLLGPRPDKKN 663
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 148/380 (38%), Gaps = 16/380 (4%)
Query: 151 NDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVT 210
N A FF WA +QPGY+H YHS+ L R+F L + ++ + L+
Sbjct: 60 NHHSLALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQVK---SNKILLD 116
Query: 211 PQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF 270
+I R A G ++ D LL+ L D LF
Sbjct: 117 SSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLTS-DGCYDYAQKLF 175
Query: 271 C---NKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRG--IQHDVVSYASIMSC 325
+K V L F + + GW + R+ E+ K I +++ I+
Sbjct: 176 VKMRHKGV-SLNTLGFGVYI-GWFCRSSETNQLLRLVDEVKKANLNINGSIIALL-ILHS 232
Query: 326 YSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHA-LAKGRLVKEAVNLLQTMEKNNVTP 384
K S+ F + ++++N PD Y + A + G L + V +L+ K V P
Sbjct: 233 LCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQV-VLKKKRKLGVAP 291
Query: 385 DVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRV--EEEVFELLD 442
Y + I L +++ EAKEV ++ A + + E L
Sbjct: 292 RSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLV 351
Query: 443 KMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNG 502
M G P I T L + CR K D + K + ++ G + SY ++I L G
Sbjct: 352 YMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAG 411
Query: 503 KVKEAHDYYIEMQRKGFLPE 522
+V+E++ EM+++G P+
Sbjct: 412 RVRESYTALQEMKKEGLAPD 431
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 19/212 (8%)
Query: 300 AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIH 359
A R ++SK +HD KS L K ++L + +K + + Y+ +I
Sbjct: 361 AIRTLSKLSKNLCRHD------------KSDHLIKAYEL---LSSKGYFSELQSYSLMIS 405
Query: 360 ALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITP 419
L K V+E+ LQ M+K + PDV YN+LI+ CK I AK+++++M
Sbjct: 406 FLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKM 465
Query: 420 TIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIW 476
+ T++ R L E EE L DKM E G P Y+ LI C+ K++ +++
Sbjct: 466 NLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVF 525
Query: 477 -NMMREDGVSHDRSSYIVLIHGLFLNGKVKEA 507
M D + R + L NG EA
Sbjct: 526 RKCMERDHKTVTRRVLSEFVLNLCSNGHSGEA 557
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 114/257 (44%), Gaps = 14/257 (5%)
Query: 165 KQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAV 224
++ G A +Y + I L ++ A + EV+ +G + L +I AV
Sbjct: 285 RKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIV---SGKFPMDNDILDALIGSVSAV 341
Query: 225 RDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHL-----LFCNKNVFPLE 279
D A+ G I L LCR+ ++HL L +K F E
Sbjct: 342 -DPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDK---SDHLIKAYELLSSKGYFS-E 396
Query: 280 IKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLF 339
++S++++++ C RE+ EM K G+ DV Y +++ K+ + +L+
Sbjct: 397 LQSYSLMISFLCK-AGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLW 455
Query: 340 DQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKN 399
D+M + + YN +I L++ +E++ L M + + PD Y SLI+ LCK
Sbjct: 456 DEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKE 515
Query: 400 RKIDEAKEVFNDMMKRN 416
KI+ A EVF M+R+
Sbjct: 516 TKIEAAMEVFRKCMERD 532
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 115/258 (44%), Gaps = 10/258 (3%)
Query: 229 RAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIK--SFNII 286
+A++TF+ +G + + F L L ++ L + + ++I SFNI
Sbjct: 124 QALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIA 183
Query: 287 LNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKK 346
+ +C L + A EM K G+ DVV+Y +++S K + L++ M K
Sbjct: 184 IKSFCELGI-LDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKG 242
Query: 347 ITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAK 406
P+ +N I L R +A +LL M K V PD +TYN +IK R D A+
Sbjct: 243 CKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAE 302
Query: 407 EVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELL-----DKMRELGCYPTIETYIMLIR 461
V+ M + P ++ + L + F+L D MR+ YP ++T ML++
Sbjct: 303 RVYTAMHGKGYKPNLKIYQTMIHYL-CKAGNFDLAYTMCKDCMRK-KWYPNLDTVEMLLK 360
Query: 462 KFCRWRKLDEVFKIWNMM 479
+ +LD+ I ++
Sbjct: 361 GLVKKGQLDQAKSIMELV 378
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 6/261 (2%)
Query: 297 AREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQ-LFDQMKNKKITPDRKVYN 355
++A + M G + V S+ + + S + L+ +++ L D I D +N
Sbjct: 122 TKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFN 181
Query: 356 AVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKR 415
I + + ++ A ++ MEK+ +TPDVVTY +LI L K+ + ++N M+ +
Sbjct: 182 IAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLK 241
Query: 416 NITPTIRTFHAFFRIL---RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEV 472
P + TF+ + L R + +LL M +L P TY M+I+ F R D
Sbjct: 242 GCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMA 301
Query: 473 FKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAW 532
+++ M G + Y +IH L G A+ + RK + P T +ML
Sbjct: 302 ERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKG 361
Query: 533 L--SGRQGTEGQVTDLEHNQL 551
L G+ + +L H ++
Sbjct: 362 LVKKGQLDQAKSIMELVHRRV 382
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 127/290 (43%), Gaps = 12/290 (4%)
Query: 150 RNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLV 209
++D A F +A +QP + HS + +I LG+ R F+ +++ R G +
Sbjct: 61 QSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYP---L 117
Query: 210 TPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKN-VQDAEHL 268
T + +I+ Y + + ++TFY F F +L L ++ +Q A L
Sbjct: 118 TGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFEL 177
Query: 269 LFCNK--NVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCY 326
++ V P +S+N+++ +C L A +++ +M +R + DV SY ++ +
Sbjct: 178 FKSSRLHGVMP-NTRSYNLLMQAFC-LNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGF 235
Query: 327 SKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDV 386
+ ++ +L D M NK PDR +I L + E L+ M +P
Sbjct: 236 CRKGQVNGAMELLDDMLNKGFVPDR----TLIGGLCDQGMFDEGKKYLEEMISKGFSPHF 291
Query: 387 VTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEE 436
N L+K C K++EA +V +MK T T+ ++ E+E
Sbjct: 292 SVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDE 341
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 39/218 (17%)
Query: 305 HEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKG 364
H S + ++ +Y ++ Y+++ KV F +M TP K N ++ L
Sbjct: 110 HRSSGYPLTGEIFTY--LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSH 167
Query: 365 R-LVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRT 423
R +++A L ++ + V P+ +YN L++ C N + A ++F M++R++
Sbjct: 168 RGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVV----- 222
Query: 424 FHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDG 483
P +++Y +LI+ FCR +++ ++ + M G
Sbjct: 223 ---------------------------PDVDSYKILIQGFCRKGQVNGAMELLDDMLNKG 255
Query: 484 VSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
DR+ LI GL G E Y EM KGF P
Sbjct: 256 FVPDRT----LIGGLCDQGMFDEGKKYLEEMISKGFSP 289
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 1/152 (0%)
Query: 332 LYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNS 391
L K F+LF + + P+ + YN ++ A + A L M + +V PDV +Y
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 392 LIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYP 451
LI+ C+ +++ A E+ +DM+ + P RT + +E + L++M G P
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPD-RTLIGGLCDQGMFDEGKKYLEEMISKGFSP 289
Query: 452 TIETYIMLIRKFCRWRKLDEVFKIWNMMREDG 483
L++ FC + K++E + ++ ++G
Sbjct: 290 HFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 321
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 6/145 (4%)
Query: 382 VTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE----EEV 437
+T ++ TY LIK + + ++ F M++ N TP + + +L ++
Sbjct: 117 LTGEIFTY--LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKA 174
Query: 438 FELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHG 497
FEL R G P +Y +L++ FC L ++++ M E V D SY +LI G
Sbjct: 175 FELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQG 234
Query: 498 LFLNGKVKEAHDYYIEMQRKGFLPE 522
G+V A + +M KGF+P+
Sbjct: 235 FCRKGQVNGAMELLDDMLNKGFVPD 259
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 155/375 (41%), Gaps = 46/375 (12%)
Query: 151 NDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVT 210
N +++ FF+WAG + HS Y IL K D +IE R ++ T
Sbjct: 73 NQFQSGLRFFIWAGTLSSHRHSAYMYTKACDILKIRAKPDLIKYVIESYRKEECFVNVKT 132
Query: 211 PQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF 270
+ +L + + A + ++F EF +C + LF
Sbjct: 133 MRIVLTLCNQ------ANLADEALWVLRKF------PEFN-----VCADTVAYNLVIRLF 175
Query: 271 CNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSS 330
+K NI A+ + EM G+ DV++Y S+++ Y +
Sbjct: 176 ADKG-------DLNI--------------ADMLIKEMDCVGLYPDVITYTSMINGYCNAG 214
Query: 331 KLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNN----VTPDV 386
K+ ++L +M + Y+ ++ + K ++ A+ LL MEK + ++P+
Sbjct: 215 KIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNA 274
Query: 387 VTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFR-ILRVEEEV---FELLD 442
VTY +I+ C+ R+++EA V + M R P T + +L +E+V +L+D
Sbjct: 275 VTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLID 334
Query: 443 KMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNG 502
K+ +LG E + R ++ +E KI+ +M GV D + + L L
Sbjct: 335 KLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLE 394
Query: 503 KVKEAHDYYIEMQRK 517
+ + Y E+++K
Sbjct: 395 RYLDCFLLYQEIEKK 409
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 96/187 (51%), Gaps = 10/187 (5%)
Query: 283 FNIILNGWCNLIVSAREAERVWHEMSK-RGI---QHDVVSYASIMSCYSKSSKLYKVFQL 338
+N ++ + A+ E+V + K +GI Q +VV+Y ++ +++S K+ +V L
Sbjct: 171 YNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNAL 230
Query: 339 FDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCK 398
F + ++PD +N V+ A K ++KE +L M N PD++T+N LI K
Sbjct: 231 FKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGK 290
Query: 399 NRKIDEAKEVFNDMMKRNITPTIRTFHAFF------RILRVEEEVFELLDKMRELGCYPT 452
++ ++ ++ F +M+ PT+ TF++ R++ E VF+ ++ M + + T
Sbjct: 291 KQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFIT 350
Query: 453 IETYIML 459
E IM+
Sbjct: 351 YECMIMM 357
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 143/347 (41%), Gaps = 21/347 (6%)
Query: 151 NDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVT 210
+ W F W KQ Y Y +IS++GK + A L M+ G P
Sbjct: 111 DKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASV 170
Query: 211 PQTLLIMIRKYCAVRDVGRAINTF--YAFKRFGF---QVGIDEFQGLLSALCRYKNVQDA 265
L I + RD +A+ Y K G Q + + LL A + V D
Sbjct: 171 YNAL---ITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKV-DQ 226
Query: 266 EHLLFCNKNVFPL--EIKSFNIILNGWC-NLIVSAREAERVWHEMSKRGIQHDVVSYASI 322
+ LF + ++ P+ ++ +FN +++ + N ++ +E E V M + D++++ +
Sbjct: 227 VNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMI--KEMEAVLTRMRSNECKPDIITFNVL 284
Query: 323 MSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNV 382
+ Y K + K+ Q F + K P +N++I K R++ +A + + M N
Sbjct: 285 IDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNY 344
Query: 383 TPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRI-----LRVEEEV 437
P +TY +I + A+E+F ++ + + T +A + L +E +
Sbjct: 345 IPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEAD- 403
Query: 438 FELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGV 484
+L +P TY L + + + ++V + M +DG+
Sbjct: 404 -KLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGI 449
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 84/197 (42%), Gaps = 30/197 (15%)
Query: 328 KSSKLYKVFQLFDQMKNKK-ITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDV 386
KS K + ++F M+ ++ PD VY+ +I + K + A+ L M+ + PD
Sbjct: 109 KSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDA 168
Query: 387 VTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRE 446
YN+LI R D+AK + E+V LDKM+
Sbjct: 169 SVYNALITAHLHTR--DKAKAL--------------------------EKVRGYLDKMKG 200
Query: 447 LG-CYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVK 505
+ C P + TY +L+R F + K+D+V ++ + VS D ++ ++ NG +K
Sbjct: 201 IERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIK 260
Query: 506 EAHDYYIEMQRKGFLPE 522
E M+ P+
Sbjct: 261 EMEAVLTRMRSNECKPD 277
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 96/187 (51%), Gaps = 10/187 (5%)
Query: 283 FNIILNGWCNLIVSAREAERVWHEMSK-RGI---QHDVVSYASIMSCYSKSSKLYKVFQL 338
+N ++ + A+ E+V + K +GI Q +VV+Y ++ +++S K+ +V L
Sbjct: 171 YNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNAL 230
Query: 339 FDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCK 398
F + ++PD +N V+ A K ++KE +L M N PD++T+N LI K
Sbjct: 231 FKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGK 290
Query: 399 NRKIDEAKEVFNDMMKRNITPTIRTFHAFF------RILRVEEEVFELLDKMRELGCYPT 452
++ ++ ++ F +M+ PT+ TF++ R++ E VF+ ++ M + + T
Sbjct: 291 KQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFIT 350
Query: 453 IETYIML 459
E IM+
Sbjct: 351 YECMIMM 357
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 143/347 (41%), Gaps = 21/347 (6%)
Query: 151 NDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVT 210
+ W F W KQ Y Y +IS++GK + A L M+ G P
Sbjct: 111 DKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASV 170
Query: 211 PQTLLIMIRKYCAVRDVGRAINTF--YAFKRFGF---QVGIDEFQGLLSALCRYKNVQDA 265
L I + RD +A+ Y K G Q + + LL A + V D
Sbjct: 171 YNAL---ITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKV-DQ 226
Query: 266 EHLLFCNKNVFPL--EIKSFNIILNGWC-NLIVSAREAERVWHEMSKRGIQHDVVSYASI 322
+ LF + ++ P+ ++ +FN +++ + N ++ +E E V M + D++++ +
Sbjct: 227 VNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMI--KEMEAVLTRMRSNECKPDIITFNVL 284
Query: 323 MSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNV 382
+ Y K + K+ Q F + K P +N++I K R++ +A + + M N
Sbjct: 285 IDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNY 344
Query: 383 TPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRI-----LRVEEEV 437
P +TY +I + A+E+F ++ + + T +A + L +E +
Sbjct: 345 IPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEAD- 403
Query: 438 FELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGV 484
+L +P TY L + + + ++V + M +DG+
Sbjct: 404 -KLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGI 449
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 84/197 (42%), Gaps = 30/197 (15%)
Query: 328 KSSKLYKVFQLFDQMKNKK-ITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDV 386
KS K + ++F M+ ++ PD VY+ +I + K + A+ L M+ + PD
Sbjct: 109 KSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDA 168
Query: 387 VTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRE 446
YN+LI R D+AK + E+V LDKM+
Sbjct: 169 SVYNALITAHLHTR--DKAKAL--------------------------EKVRGYLDKMKG 200
Query: 447 LG-CYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVK 505
+ C P + TY +L+R F + K+D+V ++ + VS D ++ ++ NG +K
Sbjct: 201 IERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIK 260
Query: 506 EAHDYYIEMQRKGFLPE 522
E M+ P+
Sbjct: 261 EMEAVLTRMRSNECKPD 277
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 130/289 (44%), Gaps = 46/289 (15%)
Query: 272 NKNVFPLEIKSFNIILNGWCNLIVSARE---AERVWHEMSKRGIQHDVVSYASIMSCYSK 328
+K++FP+E +N+ + + R+ E + EM K G++ D ++Y++I++C +
Sbjct: 178 SKSLFPMETIFYNVTMKS----LRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKR 233
Query: 329 SSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNL--------------- 373
+ K + F++M + PD Y+A++ +K V+E ++L
Sbjct: 234 CNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIA 293
Query: 374 --------------------LQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMM 413
LQ M+ +V P+VV YN+L++ + + K A+ +FN+M+
Sbjct: 294 FSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEML 353
Query: 414 KRNITPTIRTFHAFFRI---LRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLD 470
+ +TP +T A +I R + +L ++M+ Y L+ +
Sbjct: 354 EAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEE 413
Query: 471 EVFKIWNMMRED-GVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKG 518
E +++N M+E D SY +++ GK ++A + + EM + G
Sbjct: 414 EAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAG 462
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 141/344 (40%), Gaps = 15/344 (4%)
Query: 152 DWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTP 211
+W+ TFF W + + Y+ + L R+F + M G +T
Sbjct: 165 EWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITY 224
Query: 212 QTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFC 271
T +I K C + + +AI F + G + +L Y E +L
Sbjct: 225 ST-IITCAKRCNLYN--KAIEWFERMYKTGLMPDEVTYSAILDV---YSKSGKVEEVLSL 278
Query: 272 NKNVFPLEIKSFNIILNGWCNLIVSAREAE---RVWHEMSKRGIQHDVVSYASIMSCYSK 328
+ K I + + A + + V EM ++ +VV Y +++ +
Sbjct: 279 YERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGR 338
Query: 329 SSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVT 388
+ K LF++M +TP+ K A++ K R ++A+ L + M+ D +
Sbjct: 339 AGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFIL 398
Query: 389 YNSLIKPLCKNRKI-DEAKEVFNDMMKR-NITPTIRTFHAFFRILRV---EEEVFELLDK 443
YN+L+ +C + + +EA+ +FNDM + P ++ A I E+ EL ++
Sbjct: 399 YNTLLN-MCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEE 457
Query: 444 MRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHD 487
M + G + L++ + +++D+V ++++ + GV D
Sbjct: 458 MLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPD 501
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 69/140 (49%), Gaps = 1/140 (0%)
Query: 297 AREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNK-KITPDRKVYN 355
AR+A ++W EM + D + Y ++++ + + +LF+ MK + PD Y
Sbjct: 377 ARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYT 436
Query: 356 AVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKR 415
A+++ G ++A+ L + M K V +V+ L++ L K ++ID+ VF+ +KR
Sbjct: 437 AMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKR 496
Query: 416 NITPTIRTFHAFFRILRVEE 435
+ P R ++ + E
Sbjct: 497 GVKPDDRLCGCLLSVMALCE 516
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 99/221 (44%), Gaps = 10/221 (4%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y++++ +G+ K A +L M G P+ +TL +++ Y R A+ +
Sbjct: 329 YNTLLEAMGRAGKPGLARSLFNEMLEAGLTPN---EKTLTALVKIYGKARWARDALQLWE 385
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIILNGWCNLIV 295
K + + + LL+ ++AE L N ++ + N N+
Sbjct: 386 EMKAKKWPMDFILYNTLLNMCADIGLEEEAERLF--NDMKESVQCRPDNFSYTAMLNIYG 443
Query: 296 SAREAER---VWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRK 352
S +AE+ ++ EM K G+Q +V+ ++ C K+ ++ V +FD + + PD +
Sbjct: 444 SGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDR 503
Query: 353 VYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLI 393
+ ++ +A ++A ++ +E+ N +VT+ +LI
Sbjct: 504 LCGCLLSVMALCESSEDAEKVMACLERAN--KKLVTFVNLI 542
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 173/424 (40%), Gaps = 30/424 (7%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
YH +++ L + + FD+ +V+ + V T I+++K+C + A +
Sbjct: 220 YHVLLNALVEEKCFDS----FDVIFDQISVRGFVCAVTHSILVKKFCKQGKLDEAEDYLR 275
Query: 236 AF-----KRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEI-KSFNIILNG 289
A G +GI L+ ALC + Q+A LL K V + + +++NI
Sbjct: 276 ALLPNDPAGCGSGLGI-----LVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNI---- 326
Query: 290 WCNLIVSA----REAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNK 345
W ++ A A+ + G + +V Y S++ K + L V+ + +M +
Sbjct: 327 WIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVR 386
Query: 346 KITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEA 405
++P++K NA + K V EA+ L ++ + P ++YN LI LC N +++A
Sbjct: 387 GVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQA 446
Query: 406 KEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELGCYPTIETYIMLIRK 462
+V + R +TF L + + EL+ E P +I
Sbjct: 447 YDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISA 506
Query: 463 FCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
C K+++ I + + GV + LI+G + A I MQ KG+ P
Sbjct: 507 LCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPT 566
Query: 523 PKT-EQMLQAWLSGRQGTEGQVTDLEHNQLEDDTVEKKVKATPSKFDKEKAFLREPETRR 581
++Q G + T L QL E KV+A + F + F +P+ R
Sbjct: 567 RSLYRNVIQCVCEMESGEKNFFTTLLKFQLS--LWEHKVQAY-NLFIEGAGFAGKPKLAR 623
Query: 582 VTRD 585
+ D
Sbjct: 624 LVYD 627
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 120/266 (45%), Gaps = 30/266 (11%)
Query: 279 EIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQL 338
+++++N+ + G + A V+ M + GI V S ++ Y K+ K+
Sbjct: 602 KVQAYNLFIEG-AGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHF 660
Query: 339 FDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCK 398
F ++ + T R +Y +I L K + +A++ L+ M+ + P + Y I+ LC
Sbjct: 661 FHDLREQGKTKKR-LYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCN 719
Query: 399 NRKIDEAKEVFNDMMK--RNITPTI------------RTFHAFFRILRVEEEVFELLDKM 444
K DEA + N+ K R IT I + A+ R+ +E+++ E M
Sbjct: 720 EEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAMKSKGVYEAWTRMRNIEDKIPE----M 775
Query: 445 RELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKV 504
+ LG I + I ++LDEV E D +Y +L+ + +N +
Sbjct: 776 KSLG--ELIGLFSGRIDMEVELKRLDEVI-------EKCYPLDMYTYNMLLRMIVMN-QA 825
Query: 505 KEAHDYYIEMQRKGFLPEPKTEQMLQ 530
++A++ + R+G++P +T+ +L+
Sbjct: 826 EDAYEMVERIARRGYVPNERTDMILE 851
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 123/300 (41%), Gaps = 19/300 (6%)
Query: 183 LGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGF 242
L K R+F LIE + P + +IR Y A+ TF ++G
Sbjct: 77 LAKCRRFSDIETLIESHKND---PKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGT 133
Query: 243 QVGIDEFQGLLSALCRYKNVQDAEHLL-----FCNKNVFPLEIKSFNIILNGWCNLIVSA 297
F LL+A KN L NK + P +I S+ I++ +C+
Sbjct: 134 PRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNK-IIPDKI-SYGILIKSYCDSGTPE 191
Query: 298 REAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAV 357
+ E + +M +G++ +++ +I+S K +L L+++M K D YN
Sbjct: 192 KAIE-IMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVR 250
Query: 358 IHALAK--GRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKR 415
I + K VKE L++ M + PD ++YN L+ C+ +DEAK+V+ +
Sbjct: 251 IMSAQKESPERVKE---LIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGN 307
Query: 416 NITPTIRTFHAFFRIL---RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEV 472
N P TF L R+ E+ + + K + P T L+ +K D+
Sbjct: 308 NCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDA 367
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 121/255 (47%), Gaps = 20/255 (7%)
Query: 256 LCRYKNVQDAEHLLFCNKNVFPLEIKSFNIILNGWCNLIVSAREAE------RVWHEMSK 309
L + + D E L+ +KN ++ + F + LI S +A R + +M +
Sbjct: 77 LAKCRRFSDIETLIESHKNDPKIKEEPF------YSTLIRSYGQASMFNHAMRTFEQMDQ 130
Query: 310 RGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNK--KITPDRKVYNAVIHALAKGRLV 367
G VS+ ++++ S KV QLFD++ + KI PD+ Y +I +
Sbjct: 131 YGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTP 190
Query: 368 KEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAF 427
++A+ +++ M+ + + + +++ L K +++ A ++N+M+K+ ++
Sbjct: 191 EKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNV- 249
Query: 428 FRILRVEEE----VFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDG 483
RI+ ++E V EL+++M +G P +Y L+ +C LDE K++ + +
Sbjct: 250 -RIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNN 308
Query: 484 VSHDRSSYIVLIHGL 498
+ + +++ LI L
Sbjct: 309 CAPNAATFRTLIFHL 323
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/411 (21%), Positives = 155/411 (37%), Gaps = 50/411 (12%)
Query: 149 IRNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEV-MRGGGTGP- 206
+RN+ + FFL+ + +H ++I IL + R A +I + +R T
Sbjct: 81 LRNNPHLSLRFFLFTRRYSLCSHDTHSCSTLIHILSRSRLKSHASEIIRLALRLAATDED 140
Query: 207 ---------SLV--------TPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEF 249
SL+ P ++I+ +++ A+ + G I
Sbjct: 141 EDRVLKVFRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTC 200
Query: 250 QGLLSALCRYKNVQDAEHLLFCNKNVFPLE-------------IKSFNIILNGWCNLIVS 296
L++ + R + + + + VF L+ IK N ++
Sbjct: 201 NALITEVSRRRGASNGYKMY---REVFGLDDVSVDEAKKMIGKIKPNATTFNSM--MVSF 255
Query: 297 AREAE-----RVWHEMSKR-GIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPD 350
RE E R+W EM + G +V SY +M Y + + +++++MK + + D
Sbjct: 256 YREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYD 315
Query: 351 RKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFN 410
YN +I L V +A L + M + +TY L+ CK +D V+
Sbjct: 316 IVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYR 375
Query: 411 DMMKRNITPTIRTFHAFFRIL-------RVEEEVFELLDKMRELGCYPTIETYIMLIRKF 463
+M ++ T A L RV E + D +RE YP+ Y +L+++
Sbjct: 376 EMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRL 435
Query: 464 CRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEM 514
C K+D I M G + +Y I G + G + + IEM
Sbjct: 436 CEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEETSALLAIEM 486
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 86/190 (45%), Gaps = 29/190 (15%)
Query: 353 VYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNR------------ 400
V++ +I + + + AV +++ + + + T N+LI + + R
Sbjct: 164 VFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREV 223
Query: 401 ------KIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKM-----RELGC 449
+DEAK++ I P TF++ E E E+++++ E+GC
Sbjct: 224 FGLDDVSVDEAKKMIG-----KIKPNATTFNSMMVSFYREGET-EMVERIWREMEEEVGC 277
Query: 450 YPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHD 509
P + +Y +L+ +C + E K+W M+ GV +D +Y +I GL N +V +A +
Sbjct: 278 SPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKE 337
Query: 510 YYIEMQRKGF 519
+ +M KG
Sbjct: 338 LFRDMGLKGI 347
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 148/323 (45%), Gaps = 24/323 (7%)
Query: 278 LEIKSFNIILNGWCNLI-VSARE-----AERVWHEMSKRGIQHDVVSYASIMSCYSKSSK 331
L+ KSFN ++ + LI + A+E ER+ +MS+ GI D+++ +++ YSKS
Sbjct: 375 LDEKSFNASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGN 434
Query: 332 LYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNS 391
+ + F+ +K+ + PD K+Y A+I K L++ M+ + Y +
Sbjct: 435 FERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMA 494
Query: 392 LIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFEL------LDKMR 445
L++ + + A + + M + P +F A+ + + ++ D+MR
Sbjct: 495 LLRAYAQMGDANGAAGISSSMQYASDGPL--SFEAYSLFVEAYGKAGQVDKAKSNFDEMR 552
Query: 446 ELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVK 505
+LG P + L+R + LD+ ++ + +DG+ +Y VL+ + G ++
Sbjct: 553 KLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIE 612
Query: 506 EAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDLEHNQLEDDTVEKKVKATPS 565
EA +++ + G P + + L SG + + + L LE K+ + P+
Sbjct: 613 EAEQLLVKISQLGEAPPFELQVSLCCMYSGVRNEKKTLQAL--GVLE----AKRDQMGPN 666
Query: 566 KFDKEKAFLR----EPETRRVTR 584
+FDK + L+ E + RR+ +
Sbjct: 667 EFDKVISALKRGGFEKDARRMYK 689
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 136/280 (48%), Gaps = 19/280 (6%)
Query: 150 RNDWEAAFTFFLWAGKQPGYAHSVREYHSMI--SILGKMRKFDTAWNLIEVMRGGGTGPS 207
++D + A F W +Q GY H+ YH+MI +I GK F LIE + G S
Sbjct: 85 QSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNF--VETLIEEVIAGACEMS 142
Query: 208 LVTPQTLLIMIRKYCAVRDV--GRAINTFYAFKRFG-FQVGIDEFQGLLSALCRYKNVQD 264
+ L I ++C R RA + + R + ++ + LLS+L + N +
Sbjct: 143 V----PLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLN 198
Query: 265 AEHLLFCNKNVFPLEIKSFNIILNGWC-NLIVSA-------REAERVWHEMSKRGIQHDV 316
++ ++KS +I + + N+I+ A EA RV+ EM+ G + +
Sbjct: 199 VCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNA 258
Query: 317 VSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQT 376
+Y+ ++ + ++ + + +M+ K + P+ Y +I +L+ R + EAV ++
Sbjct: 259 YTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYD 318
Query: 377 MEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRN 416
M N+++PD++TYN+++ LC+ + EA E+ + KR+
Sbjct: 319 MLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRD 358
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 8/176 (4%)
Query: 332 LYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNS 391
L+ V L QMK+ + PD V N +I A AK V EA+ + + M P+ TY+
Sbjct: 204 LHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSY 263
Query: 392 LIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFELLDKMRELG 448
L+K +C+ ++ + + +M + + P + L +E +E E++ M
Sbjct: 264 LVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANS 323
Query: 449 CYPTIETYIMLIRKFCRWRKLDEVFKI---WNMMREDGVSHDRSSYIVLIHGLFLN 501
P + TY ++ + CR + E ++ W + D V +R+ ++ FLN
Sbjct: 324 LSPDMLTYNTVLTELCRGGRGSEALEMVEEWK--KRDPVMGERNYRTLMDEVYFLN 377
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 93/222 (41%), Gaps = 18/222 (8%)
Query: 350 DRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKI--DEAKE 407
+ + Y+ +I G+ L++ + V YN +I+ C RK + A +
Sbjct: 107 NHEAYHTMIKQAITGKRNNFVETLIEEVIAGACEMSVPLYNCIIR-FCCGRKFLFNRAFD 165
Query: 408 VFNDMMKRNIT-PTIRTFHAF-------FRILRVE----EEVFELLDKMRELGCYPTIET 455
V+N M++ + + P + T+ F L V V L +M+ G P
Sbjct: 166 VYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFV 225
Query: 456 YIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQ 515
M+I+ + + ++DE +++ M G + +Y L+ G+ G+V + +Y EMQ
Sbjct: 226 LNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQ 285
Query: 516 RKGFLPEPKTEQMLQAWLSGRQGTEGQVT---DLEHNQLEDD 554
KG +P +L LS + + V D+ N L D
Sbjct: 286 VKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPD 327
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 88/182 (48%), Gaps = 7/182 (3%)
Query: 300 AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIH 359
A+ + ++S + + ++ ++ + + L M +K P V+N V+H
Sbjct: 356 AQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVH 415
Query: 360 ALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITP 419
A +K + EA +L+ ME + PDV TY +I K +DEA+E+ + K++
Sbjct: 416 ACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKL 475
Query: 420 TIRTFHAFFR-ILRVEE--EVFELLDKMRELGCYPTIETYIMLIRKFC----RWRKLDEV 472
+ T+HA R ++EE E +LL++M G P + Y LI+ FC W K + +
Sbjct: 476 SPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVL 535
Query: 473 FK 474
F+
Sbjct: 536 FE 537
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 95/177 (53%), Gaps = 7/177 (3%)
Query: 245 GIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKS-FNIILNGWCNLIVSAREAERV 303
GI F ++ +LCR +NV+DA+ LL + P + FN++++ C+ EA+ V
Sbjct: 371 GIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHA-CSKTGDLDEAKEV 429
Query: 304 WHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQM--KNKKITPDRKVYNAVIHAL 361
M RG++ DV +Y I+S Y+K + + ++ + K+KK++P Y+A+I
Sbjct: 430 LKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSP--VTYHALIRGY 487
Query: 362 AKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLC-KNRKIDEAKEVFNDMMKRNI 417
K EA+ LL M++ V P+ YN LI+ C K ++A+ +F +M ++ +
Sbjct: 488 CKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGL 544
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 119/280 (42%), Gaps = 19/280 (6%)
Query: 269 LFCNKNVFPLEIKSFNIILNGWCNLIVSAREAER---VWHEMSKRGIQHDVVSYASIMSC 325
LF + I +F I++ G +VS E+ + +M+ +G D V Y+ +M
Sbjct: 190 LFIDNAPLNPSIATFRILVKG----LVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMG 245
Query: 326 YSKSSKLYKVFQLFDQMKNK--KITPDRKVYNAVIHALAKGRLVKEAVNLLQTM--EKNN 381
K+S V +L+ ++K K D VY ++ + KEA+ + E +
Sbjct: 246 CVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSK 305
Query: 382 VTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMK-----RNITPTIRTFHAFFRILRVE-- 434
V + YN +++ L +N K DEA ++F+ + K R++ + TF+
Sbjct: 306 VRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGK 365
Query: 435 -EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIV 493
EE E+ +M + C P ++ L+ + C L E K++ M E V D +Y +
Sbjct: 366 FEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGL 425
Query: 494 LIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWL 533
L+ F GK+ E YY M P LQ L
Sbjct: 426 LMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQL 465
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 34/203 (16%)
Query: 280 IKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLF 339
+ +FN+++NG+C EA V+ +M D +S+ ++M+ + L + +L+
Sbjct: 350 LGTFNVMVNGYC-AGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLY 408
Query: 340 DQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKN 399
+M+ K + PD Y ++ K + E +TM ++N+ P++ YN L L K
Sbjct: 409 GEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKA 468
Query: 400 RKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIML 459
K+D+AK F+ M+ + L++++ E Y +
Sbjct: 469 GKLDDAKSFFDMMVSK---------------LKMDD------------------EAYKFI 495
Query: 460 IRKFCRWRKLDEVFKIWNMMRED 482
+R +LDE+ KI + M +D
Sbjct: 496 MRALSEAGRLDEMLKIVDEMLDD 518
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 115/267 (43%), Gaps = 14/267 (5%)
Query: 302 RVWHEMSKR--GIQHDVVSYASIMSCYSKSSKLYKVFQLFDQM--KNKKITPDRKVYNAV 357
+++ E+ ++ G D V Y +M Y + + +++ +N K+ YN V
Sbjct: 257 KLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYV 316
Query: 358 IHALAKGRLVKEAVNLLQTMEKNNVTP-----DVVTYNSLIKPLCKNRKIDEAKEVFNDM 412
+ AL++ EA+ L ++K + P ++ T+N ++ C K +EA EVF M
Sbjct: 317 LEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQM 376
Query: 413 MKRNITPTIRTFHAFFRILRVEE---EVFELLDKMRELGCYPTIETYIMLIRKFCRWRKL 469
+P +F+ L E E +L +M E P TY +L+ + K+
Sbjct: 377 GDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKI 436
Query: 470 DEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
DE + M E + + + Y L L GK+ +A ++ M K + + + ++
Sbjct: 437 DEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSKLKMDDEAYKFIM 496
Query: 530 QAWLSGRQGTEGQVTDLEHNQLEDDTV 556
+A G ++ + L+DDTV
Sbjct: 497 RAL--SEAGRLDEMLKIVDEMLDDDTV 521
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 108/265 (40%), Gaps = 34/265 (12%)
Query: 277 PLEIKSFNIILNGWCNLIVSAREAERVWHEMSKR-GIQHDVVSYASIMSCYSKSSKLYKV 335
P +KS N +L C + +EA RV+ EM K GI+ D+ +Y ++ +S
Sbjct: 143 PRTVKSLNALLFA-CLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSS 201
Query: 336 FQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKP 395
+ + +M+ K I P + +I K E +++ M++ V V TYN +I+
Sbjct: 202 YSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQC 261
Query: 396 LCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIET 455
LCK +K EAK + + +M +MR P T
Sbjct: 262 LCKRKKSAEAKALIDGVMS---------------------------CRMR-----PNSVT 289
Query: 456 YIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQ 515
Y +LI FC LDE ++ +M +G D Y LIH L G + A E
Sbjct: 290 YSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESM 349
Query: 516 RKGFLPEPKTEQMLQAWLSGRQGTE 540
K ++P + L L+ R +
Sbjct: 350 EKNWVPSFSVMKWLVNGLASRSKVD 374
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 132/294 (44%), Gaps = 18/294 (6%)
Query: 239 RFGFQVGIDEF--QGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIILNGW--CNLI 294
R GF + + + G L C + D + K++ P ++ F +L + C+L
Sbjct: 593 RIGFSIVVRMYVKAGSLEEACSVLEIMDEQ------KDIVP-DVYLFRDMLRIYQKCDL- 644
Query: 295 VSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVY 354
+ + +++ + K GI + Y +++C +++ L ++ F++M TP+ +
Sbjct: 645 --QDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTF 702
Query: 355 NAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMK 414
N ++ K +L K+ VN L + K + DV++YN++I KN+ +M
Sbjct: 703 NVLLDVYGKAKLFKK-VNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQF 761
Query: 415 RNITPTIRTFHAFFRIL---RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDE 471
+ ++ ++ + E+ +L +M++ P TY ++I + +DE
Sbjct: 762 DGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDE 821
Query: 472 VFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT 525
V + ++E G+ D SY LI + G V+EA EM+ + +P+ T
Sbjct: 822 VADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVT 875
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 21/233 (9%)
Query: 222 CAVRDVGRAI------NTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNV 275
C + RA+ TF R+GF F LL + K + L K
Sbjct: 669 CVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRH 728
Query: 276 FPLEIKSFNIILNGWCNLIVSAREAERVWHEMSK--RGIQHDVVS-----YASIMSCYSK 328
+++ S+N I ++A + + MS + +Q D S Y +++ Y K
Sbjct: 729 GVVDVISYNTI--------IAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGK 780
Query: 329 SSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVT 388
++ K + +MK PD YN +I+ + + E ++L+ ++++ + PD+ +
Sbjct: 781 DKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCS 840
Query: 389 YNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELL 441
YN+LIK ++EA + +M RNI P T+ LR +E E +
Sbjct: 841 YNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAI 893
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 107/243 (44%), Gaps = 22/243 (9%)
Query: 246 IDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWH 305
+DE G + RY F +FN++L+ + + + E
Sbjct: 680 LDELSGTFEEMIRYG---------------FTPNTVTFNVLLDVYGKAKLFKKVNELFL- 723
Query: 306 EMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGR 365
++KR DV+SY +I++ Y K+ + M+ + + YN ++ A K +
Sbjct: 724 -LAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDK 782
Query: 366 LVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFH 425
+++ ++L+ M+K+ PD TYN +I + IDE +V ++ + + P + +++
Sbjct: 783 QMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYN 842
Query: 426 AFFR---ILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNM-MRE 481
+ I + EE L+ +MR P TY L+ R + E K W++ M++
Sbjct: 843 TLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIK-WSLWMKQ 901
Query: 482 DGV 484
G+
Sbjct: 902 MGI 904
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 92/235 (39%), Gaps = 40/235 (17%)
Query: 352 KVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFND 411
+V+N VI+A K VK A M + V P+V T L+ KN ++EA+ F+
Sbjct: 211 QVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSH 270
Query: 412 MMKRNIT-----PTIRTFHAFFRILRVEEEVFELLDK----------------------- 443
M K I ++ T + R+ EEV +L+ +
Sbjct: 271 MRKFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKM 330
Query: 444 ---------MRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVL 494
M G P I Y LI + + K++ +++ + G+ D +SY +
Sbjct: 331 ELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSM 390
Query: 495 IHGLFLNGKVKEAHDYYIEMQRKGFLPEP---KTEQMLQAWLSGRQGTEGQVTDL 546
I G +EA YY E++R G+ P T LQA R G + D+
Sbjct: 391 IEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDM 445
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/397 (20%), Positives = 162/397 (40%), Gaps = 50/397 (12%)
Query: 156 AFTFFLWAGKQPGYAHSVREYHSMISILGKM-RKFDTAWNLIEVMRGGGTGPSLVTPQTL 214
FF W KQ Y H R + M+ ++ K+ R++ + +IE ++ G + P+
Sbjct: 55 TLNFFFWCAKQNNYFHDDRAFDHMVGVVEKLTREYYSIDRIIERLKISGCE---IKPRVF 111
Query: 215 LIMIRKYCAVRDVGRAINTFYAFKRFGF--------------------QVGIDEFQGLLS 254
L+++ + +AI + FGF ++ F+G+
Sbjct: 112 LLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGI-- 169
Query: 255 ALCRYKNVQDAEHLL--FCNK----NVFPLEIKSFNIILNGW-------------CNLIV 295
R++N + L FC++ ++ ++I +I G+ C
Sbjct: 170 ---RFRNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTG 226
Query: 296 SAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYN 355
EA +V M GI V ++ ++S + +S + K LF++M +P+ Y
Sbjct: 227 CVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYT 286
Query: 356 AVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKR 415
++I +V EA +L ++ + PD+V N +I + + +EA++VF + KR
Sbjct: 287 SLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKR 346
Query: 416 NITPTIRTFHAFFRILRVEEEVFELLDKMRE-LGCYPTIETYIMLIRKFCRWRKLDEVFK 474
+ P TF + L + + F+L+ ++ +G + T +L F + K
Sbjct: 347 KLVPDQYTFASILSSLCLSGK-FDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALK 405
Query: 475 IWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYY 511
+ ++M + D +Y V + L G + A Y
Sbjct: 406 VLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMY 442
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/377 (19%), Positives = 146/377 (38%), Gaps = 66/377 (17%)
Query: 216 IMIRKYCAVRDVGRAINTFYAFKRF---GFQVGIDEFQGLLSALCRYKNVQDAEH---LL 269
I + +C+ G + KR GF + F +L CR V +A L+
Sbjct: 179 IALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLM 238
Query: 270 FCNKNVFPLEIKSFNIILNGWCNLIVSA-------REAERVWHEMSKRGIQHDVVSYASI 322
C+ ++ +N W +++VS ++A ++++M + G ++V+Y S+
Sbjct: 239 ICS---------GISVSVNVW-SMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSL 288
Query: 323 MSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNV 382
+ + + + F + +++++ + PD + N +IH + +EA + ++EK +
Sbjct: 289 IKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKL 348
Query: 383 TPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLD 442
PD T+ S++ LC + K D + + + T F + ++L
Sbjct: 349 VPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLS 408
Query: 443 KMR----ELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMRE-----DGVSH------- 486
M L CY TY + + CR K++ ++ + D H
Sbjct: 409 IMSYKDFALDCY----TYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSL 464
Query: 487 -----------------------DRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEP 523
D SY V I GL +++EA+ +M+ G P
Sbjct: 465 IELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNR 524
Query: 524 KTEQMLQAWLSGRQGTE 540
+T + + + L + TE
Sbjct: 525 RTYRTIISGLCKEKETE 541
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 124/326 (38%), Gaps = 46/326 (14%)
Query: 166 QPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVR 225
Q G + ++ Y S+I + D A+ ++ ++ G P +V +MI Y +
Sbjct: 275 QIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCN---LMIHTYTRLG 331
Query: 226 DVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNI 285
A F + ++ F +LS+LC
Sbjct: 332 RFEEARKVFTSLEKRKLVPDQYTFASILSSLC---------------------------- 363
Query: 286 ILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNK 345
L+G +L+ R+ H + G D+V+ + +C+SK ++ M K
Sbjct: 364 -LSGKFDLV------PRITHGI---GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYK 413
Query: 346 KITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEA 405
D Y + AL +G + A+ + + + K D ++++I L + K + A
Sbjct: 414 DFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTA 473
Query: 406 KEVFNDMMKR----NITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIR 461
+F + ++ R R+EE + L M+E G YP TY +I
Sbjct: 474 VHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEE-AYSLCCDMKEGGIYPNRRTYRTIIS 532
Query: 462 KFCRWRKLDEVFKIWNMMREDGVSHD 487
C+ ++ ++V KI ++GV D
Sbjct: 533 GLCKEKETEKVRKILRECIQEGVELD 558
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 165/422 (39%), Gaps = 84/422 (19%)
Query: 176 YHSMISILGKMRKF-DTAWNLIE-VMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINT 233
+ + I +L K+ K+ + A+ ++ V+R G PS TP IM+R R + R T
Sbjct: 89 HETAIYVLRKLEKYPEKAYYFLDWVLRDSGLSPS--TP-LYSIMLRILVQQRSMKRFWMT 145
Query: 234 FYAFKRFGFQVGIDEFQGLLSALCRYKNVQDA-------EHLLFCNK-NVFPLEIKSFNI 285
K+ GF + D ++ + L + K+ DA E +L N +V E+ + +
Sbjct: 146 LREMKQGGFYLDEDTYKTIYGELSKEKSKADAVAVAHFYERMLKENAMSVVAGEVSA--V 203
Query: 286 ILNG-WC----------NLIVSAREAERVWHEMSKRGI------------------QHDV 316
+ G W L++S RV E+ + + QH
Sbjct: 204 VTKGDWSCEVERELQEMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHST 263
Query: 317 VSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQT 376
V+Y + + ++ + + + + + D+MK D Y V K R++ E V L +
Sbjct: 264 VTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEY 323
Query: 377 MEKNNVTPDV-------------------------------------VTYNSLIKPLCKN 399
M P + Y+ + + L
Sbjct: 324 MMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSV 383
Query: 400 RKIDEAKEVFNDMMKRNITPTIRTFHAF-FRILRVE--EEVFELLDKMRELGCYPTIETY 456
+ DEA+E+ M P T+ F + + + EE +LD+M GC+P I+T+
Sbjct: 384 GRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTW 443
Query: 457 IMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQR 516
+LI+ C+ +LD+ + M E G D + VLI G ++ K + A + +EM +
Sbjct: 444 TILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVK 503
Query: 517 KG 518
Sbjct: 504 NA 505
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/335 (20%), Positives = 129/335 (38%), Gaps = 47/335 (14%)
Query: 156 AFTFFLWAGKQPG---YAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQ 212
A FF W G Y HS Y++ + +L + W++++ M+ G L
Sbjct: 243 ALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDL---D 299
Query: 213 TLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCN 272
T + + R++ R + + + F+ I + LL L N
Sbjct: 300 TYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPN----------- 348
Query: 273 KNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKL 332
+++ +R+ E +SK Y I + +
Sbjct: 349 --------PDLDLVFR-------VSRKYESTGKSLSK-------AVYDGIHRSLTSVGRF 386
Query: 333 YKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSL 392
+ ++ M+N PD Y+ ++ L K + ++EA +L ME PD+ T+ L
Sbjct: 387 DEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTIL 446
Query: 393 IKPLCKNRKIDEAKEVFNDMMKR------NITPTIRTFHAFFRILRVEEEVFELLDKMRE 446
I+ CKN ++D+A F +M+++ N+ + F + E L++ ++
Sbjct: 447 IQGHCKNNELDKALACFANMLEKGFDIDSNLLDVL--IDGFVIHNKFEGASIFLMEMVKN 504
Query: 447 LGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMRE 481
P TY +LI K + +K +E + MM++
Sbjct: 505 ANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKK 539
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 281 KSFNIILNGWCNLIVSAR---EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQ 337
KSFN ILN L+VSA+ E +++ K G++ D ++ +S L Q
Sbjct: 168 KSFNFILN----LLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQ 223
Query: 338 LFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLC 397
L D+ +K P+ ++ +I +EA LL+ MEK + PD +T+N LI L
Sbjct: 224 LLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLR 283
Query: 398 KNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL---RVEEEVFELLDKMRELGCYPTIE 454
K +++E ++ M + P T+ L + E E++ +M G P+
Sbjct: 284 KKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFL 343
Query: 455 TYIMLIRKFCRWRKLDEV 472
+Y ++ C + + E+
Sbjct: 344 SYKKMVLGLCETKSVVEM 361
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 95/226 (42%), Gaps = 34/226 (15%)
Query: 319 YASIMSCYSK-SSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTM 377
+ ++M Y + ++ + ++ M + P K +N +++ L +L E + +
Sbjct: 134 FYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSA 193
Query: 378 EKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEV 437
K V D N LIK LC++ ++ A
Sbjct: 194 PKLGVEIDACCLNILIKGLCESGNLEAA-------------------------------- 221
Query: 438 FELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHG 497
+LLD+ + P + T+ LIR FC K +E FK+ M ++ + D ++ +LI G
Sbjct: 222 LQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISG 281
Query: 498 LFLNGKVKEAHDYYIEMQRKGFLPEPKT-EQMLQAWLSGRQGTEGQ 542
L G+V+E D M+ KG P P T +++L L ++ E +
Sbjct: 282 LRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAK 327
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 105/241 (43%), Gaps = 18/241 (7%)
Query: 276 FPLEIKSFNIILNG---WCNLIVSAREAERVWHEMSKRGIQH------DVVSYASIMSCY 326
F + S+NI ++G W +L A ++ EM +R + D+ +Y S++
Sbjct: 244 FKFDTWSYNICIHGFGCWGDL----DAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVL 299
Query: 327 SKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDV 386
K ++D++K PD Y +I K + +A+ + M+ N PD
Sbjct: 300 CLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDT 359
Query: 387 VTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFH----AFFRILRVEEEVFELLD 442
+ YN L+ K RK+ EA ++F M++ + + T++ FR R E F L
Sbjct: 360 IVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAG-FTLFC 418
Query: 443 KMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNG 502
+++ G + T+ ++ + CR KL+ K+ M G S D + L+ G G
Sbjct: 419 DLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQG 478
Query: 503 K 503
+
Sbjct: 479 R 479
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 121/287 (42%), Gaps = 15/287 (5%)
Query: 206 PSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQV--------GIDEFQGLLSALC 257
P V LL+ +R+ + R KRF F G + L +AL
Sbjct: 210 PGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALS 269
Query: 258 RYKNVQDAEHLLFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVV 317
+K +++ + + F +I ++N +++ C L A++A VW E+ G + D
Sbjct: 270 LFKEMKERSSVY---GSSFGPDICTYNSLIHVLC-LFGKAKDALIVWDELKVSGHEPDNS 325
Query: 318 SYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTM 377
+Y ++ KS ++ +++ +M+ PD VYN ++ K R V EA L + M
Sbjct: 326 TYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKM 385
Query: 378 EKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE--- 434
+ V TYN LI L +N + + +F D+ K+ TF L E
Sbjct: 386 VQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKL 445
Query: 435 EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMRE 481
E +L+++M G + T L+ F + + D K+ +RE
Sbjct: 446 EGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIRE 492
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 11/228 (4%)
Query: 330 SKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEK------NNVT 383
S+ +VF+ MK K D YN IH + A++L + M++ ++
Sbjct: 229 SEFKRVFEKLKGMKRFKF--DTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFG 286
Query: 384 PDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---EEVFEL 440
PD+ TYNSLI LC K +A V++++ P T+ + ++ +
Sbjct: 287 PDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRI 346
Query: 441 LDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFL 500
+M+ G P Y L+ + RK+ E +++ M ++GV +Y +LI GLF
Sbjct: 347 YGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFR 406
Query: 501 NGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDLEH 548
NG+ + + ++++KG + T ++ L EG V +E
Sbjct: 407 NGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEE 454
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 34/196 (17%)
Query: 334 KVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLI 393
K+F++F+ M +T YN+++ + K + A +L M +N D+ TYN +I
Sbjct: 615 KLFEIFNGMGVTDLT--SYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVII 672
Query: 394 KPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTI 453
+ L K + D A V LD++ + G Y I
Sbjct: 673 QGLGKMGRADLASAV--------------------------------LDRLTKQGGYLDI 700
Query: 454 ETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIE 513
Y LI + +LDE ++++ M+ +G++ D SY +I GK+KEA+ Y
Sbjct: 701 VMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKA 760
Query: 514 MQRKGFLPEPKTEQML 529
M G LP T+ +L
Sbjct: 761 MLDAGCLPNHVTDTIL 776
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Query: 318 SYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTM 377
+Y S+MS + K + DQM D YN +I L K A +L +
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 378 EKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE--- 434
K D+V YN+LI L K ++DEA ++F+ M I P + +++ +
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 435 EEVFELLDKMRELGCYPTIETYIML 459
+E ++ L M + GC P T +L
Sbjct: 752 KEAYKYLKAMLDAGCLPNHVTDTIL 776
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 7/172 (4%)
Query: 221 YCAVRDVGRAINTFYAFKRFGF-QVGIDEFQGLLSALCRYKNVQDAEHLL---FCNKNVF 276
Y + D+ A F F G + + ++S+ + Q A +L F +N
Sbjct: 604 YLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMF--ENFC 661
Query: 277 PLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVF 336
+I ++N+I+ G + A A V ++K+G D+V Y ++++ K+++L +
Sbjct: 662 AADIATYNVIIQGLGKM-GRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEAT 720
Query: 337 QLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVT 388
QLFD MK+ I PD YN +I +K +KEA L+ M P+ VT
Sbjct: 721 QLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT 772
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 119/295 (40%), Gaps = 41/295 (13%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
E + M + G+ D ++ +S K + D M+ + VY++V+
Sbjct: 110 EVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVL 169
Query: 359 HALAKGRLVKEAVNLL-QTMEKNN--------------VTPDVVTYNSLIKPLCKNRKID 403
AL K ++ A+++L + +E ++ P V N L+ L +
Sbjct: 170 IALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRS 229
Query: 404 EAKEVFNDM--MKR------NITPTIRTFHAFFRILRVEEEVFELLDKMRELGCY----- 450
E K VF + MKR + I F + + + L +M+E
Sbjct: 230 EFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDL----DAALSLFKEMKERSSVYGSSF 285
Query: 451 -PTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHD 509
P I TY LI C + K + +W+ ++ G D S+Y +LI G + ++ +A
Sbjct: 286 GPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMR 345
Query: 510 YYIEMQRKGFLPEPKTEQ-MLQAWLSGRQGTEGQVTDLEHNQLEDDTVEKKVKAT 563
Y EMQ GF+P+ +L L R+ TE QL + V++ V+A+
Sbjct: 346 IYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEA-------CQLFEKMVQEGVRAS 393
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 298 REAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAV 357
+ A V +M + D+ +Y I+ K + + D++ + D +YN +
Sbjct: 647 QTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTL 706
Query: 358 IHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNI 417
I+AL K + EA L M+ N + PDVV+YN++I+ K K+ EA + M+
Sbjct: 707 INALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGC 766
Query: 418 TP 419
P
Sbjct: 767 LP 768
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/411 (20%), Positives = 161/411 (39%), Gaps = 52/411 (12%)
Query: 167 PGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRD 226
P Y H+ Y +MI ILGK + +IE M+ +IR +
Sbjct: 40 PSYGHNGSVYATMIDILGKSNRVLEMKYVIERMK---EDSCECKDSVFASVIRTFSRAGR 96
Query: 227 VGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFN 284
+ AI+ F + F F LL + + ++ A H+ +C I + N
Sbjct: 97 LEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALN 156
Query: 285 IILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKL----YKVFQLFD 340
+++ C + + A +V+ EM+ +G D SY +M + KL + ++ +F
Sbjct: 157 LLMKVLCQ-VNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFW 215
Query: 341 QMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNV------------------ 382
++ K D VY ++ AL V +A+ +L + + +
Sbjct: 216 RISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESS 275
Query: 383 -------------------TPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRT 423
P + +Y+++ L + K+ E +EV M + PT
Sbjct: 276 SEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFI 335
Query: 424 FHAFFRIL----RVEEEVFELLDKMRELGCYPTIETYIMLIRKFC-RWRKLDEVFKIWNM 478
+ A + L +++E V + +M + C PT+ Y +LI+ C + ++ V + M
Sbjct: 336 YGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKM 395
Query: 479 MREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
++ + +Y L+ GL +G+ EA EM K P +T M+
Sbjct: 396 SKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMM 446
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 117/240 (48%), Gaps = 16/240 (6%)
Query: 314 HDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNL 373
H+ YA+++ KS+++ ++ + ++MK V+ +VI ++ +++A++L
Sbjct: 44 HNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISL 103
Query: 374 LQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKR-NITPTIRTFHAFFRIL- 431
+++ + N +++++L++ + K +++ A +F + I + ++L
Sbjct: 104 FKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLC 163
Query: 432 -----RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDE----VFKIWNMMRED 482
+ +VF+ +M GCYP ++Y +L++ FC KL+E ++ ++ + +
Sbjct: 164 QVNRSDLASQVFQ---EMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQK 220
Query: 483 GVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQA--WLSGRQGTE 540
G D Y +L+ L G+V +A + ++ RKG + ++A W S +G E
Sbjct: 221 GSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIE 280
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 140/319 (43%), Gaps = 17/319 (5%)
Query: 179 MISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYA-F 237
++ +L ++ + D A + + M G P + I+++ +C + A + Y+ F
Sbjct: 158 LMKVLCQVNRSDLASQVFQEMNYQGCYPD---RDSYRILMKGFCLEGKLEEATHLLYSMF 214
Query: 238 KRFGFQVGIDE----FQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWC 291
R Q G E ++ LL ALC V DA +L K + + +I W
Sbjct: 215 WRIS-QKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWE 273
Query: 292 NLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDR 351
+ +R+ E RG + SY+++ + + KL + ++ M++K P
Sbjct: 274 SSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTP 333
Query: 352 KVYNAVIHALAKGRLVKEAVNLL-QTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFN 410
+Y A + AL + +KEAV+++ + M + + P V YN LIK LC + K EA
Sbjct: 334 FIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLK 393
Query: 411 DMMKR-NITPTIRTFHAFFRILRVEEEVFELLDKMREL---GCYPTIETYIMLIRKFCRW 466
M K+ + T+ L + + E M E+ +P +ETY M+I+ C
Sbjct: 394 KMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDM 453
Query: 467 -RKLDEVFKIWNMMREDGV 484
R+ + V + M+ +D V
Sbjct: 454 DRRYEAVMWLEEMVSQDMV 472
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/411 (20%), Positives = 161/411 (39%), Gaps = 52/411 (12%)
Query: 167 PGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRD 226
P Y H+ Y +MI ILGK + +IE M+ +IR +
Sbjct: 40 PSYGHNGSVYATMIDILGKSNRVLEMKYVIERMK---EDSCECKDSVFASVIRTFSRAGR 96
Query: 227 VGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFN 284
+ AI+ F + F F LL + + ++ A H+ +C I + N
Sbjct: 97 LEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALN 156
Query: 285 IILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKL----YKVFQLFD 340
+++ C + + A +V+ EM+ +G D SY +M + KL + ++ +F
Sbjct: 157 LLMKVLCQ-VNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFW 215
Query: 341 QMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNV------------------ 382
++ K D VY ++ AL V +A+ +L + + +
Sbjct: 216 RISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESS 275
Query: 383 -------------------TPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRT 423
P + +Y+++ L + K+ E +EV M + PT
Sbjct: 276 SEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFI 335
Query: 424 FHAFFRIL----RVEEEVFELLDKMRELGCYPTIETYIMLIRKFC-RWRKLDEVFKIWNM 478
+ A + L +++E V + +M + C PT+ Y +LI+ C + ++ V + M
Sbjct: 336 YGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKM 395
Query: 479 MREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
++ + +Y L+ GL +G+ EA EM K P +T M+
Sbjct: 396 SKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMM 446
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 117/240 (48%), Gaps = 16/240 (6%)
Query: 314 HDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNL 373
H+ YA+++ KS+++ ++ + ++MK V+ +VI ++ +++A++L
Sbjct: 44 HNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISL 103
Query: 374 LQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKR-NITPTIRTFHAFFRIL- 431
+++ + N +++++L++ + K +++ A +F + I + ++L
Sbjct: 104 FKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLC 163
Query: 432 -----RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDE----VFKIWNMMRED 482
+ +VF+ +M GCYP ++Y +L++ FC KL+E ++ ++ + +
Sbjct: 164 QVNRSDLASQVFQ---EMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQK 220
Query: 483 GVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQA--WLSGRQGTE 540
G D Y +L+ L G+V +A + ++ RKG + ++A W S +G E
Sbjct: 221 GSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIE 280
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 140/319 (43%), Gaps = 17/319 (5%)
Query: 179 MISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYA-F 237
++ +L ++ + D A + + M G P + I+++ +C + A + Y+ F
Sbjct: 158 LMKVLCQVNRSDLASQVFQEMNYQGCYPD---RDSYRILMKGFCLEGKLEEATHLLYSMF 214
Query: 238 KRFGFQVGIDE----FQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWC 291
R Q G E ++ LL ALC V DA +L K + + +I W
Sbjct: 215 WRIS-QKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWE 273
Query: 292 NLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDR 351
+ +R+ E RG + SY+++ + + KL + ++ M++K P
Sbjct: 274 SSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTP 333
Query: 352 KVYNAVIHALAKGRLVKEAVNLL-QTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFN 410
+Y A + AL + +KEAV+++ + M + + P V YN LIK LC + K EA
Sbjct: 334 FIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLK 393
Query: 411 DMMKR-NITPTIRTFHAFFRILRVEEEVFELLDKMREL---GCYPTIETYIMLIRKFCRW 466
M K+ + T+ L + + E M E+ +P +ETY M+I+ C
Sbjct: 394 KMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDM 453
Query: 467 -RKLDEVFKIWNMMREDGV 484
R+ + V + M+ +D V
Sbjct: 454 DRRYEAVMWLEEMVSQDMV 472
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 96/243 (39%), Gaps = 34/243 (13%)
Query: 280 IKSFNIILNGWCNLIVSAREAERVWHEMSKR-GIQHDVVSYASIMSCYSKSSKLYKVFQL 338
+KS N +L C + +EA+RV+ EM K GI+ D+ +Y ++ + +S + +
Sbjct: 151 VKSLNALLFA-CLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSI 209
Query: 339 FDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCK 398
+M+ K I P+ + +I E +L M+ V V TYN I+ LCK
Sbjct: 210 VAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCK 269
Query: 399 NRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIM 458
+K EAK LLD M G P TY
Sbjct: 270 RKKSKEAKA--------------------------------LLDGMLSAGMKPNTVTYSH 297
Query: 459 LIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKG 518
LI FC +E K++ +M G D Y LI+ L G + A E K
Sbjct: 298 LIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKN 357
Query: 519 FLP 521
++P
Sbjct: 358 WVP 360
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 138/344 (40%), Gaps = 37/344 (10%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
+ + + L + + F NL++ P L + + I Y + ++ F
Sbjct: 83 FSAAVENLAEKKHFSAVSNLLDGFIENR--PDLKSERFAAHAIVLYAQANMLDHSLRVFR 140
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLE--IKSFNIILNGWCNL 293
++F + LL A K+ ++A+ + ++ +E ++++N ++ +C
Sbjct: 141 DLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCE- 199
Query: 294 IVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKV 353
SA + + EM ++GI+ + S+ ++S + K +V ++ MK++ +
Sbjct: 200 SGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVST 259
Query: 354 YNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMM 413
YN I +L K + KEA LL M + P+ VTY+ LI C +EAK++F M+
Sbjct: 260 YNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMV 319
Query: 414 KRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVF 473
R GC P E Y LI C+ +
Sbjct: 320 NR--------------------------------GCKPDSECYFTLIYYLCKGGDFETAL 347
Query: 474 KIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRK 517
+ E S L++GL + KV+EA + +++ K
Sbjct: 348 SLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 11/219 (5%)
Query: 308 SKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLV 367
S+R H +V YA +++ L ++F ++ +I+ K NA++ A +
Sbjct: 115 SERFAAHAIVLYA-------QANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDY 167
Query: 368 KEAVNLLQTMEKN-NVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHA 426
KEA + M K + PD+ TYN +IK C++ + + +M ++ I P +F
Sbjct: 168 KEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGL 227
Query: 427 FFRILRVEE---EVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDG 483
E+ EV ++L M++ G + TY + I+ C+ +K E + + M G
Sbjct: 228 MISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAG 287
Query: 484 VSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
+ + +Y LIHG +EA + M +G P+
Sbjct: 288 MKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPD 326
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 7/184 (3%)
Query: 349 PDRKVYNAVIHAL---AKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEA 405
PD K HA+ A+ ++ ++ + + +EK ++ V + N+L+ + EA
Sbjct: 111 PDLKSERFAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEA 170
Query: 406 KEVFNDMMKR-NITPTIRTFHAFFRIL---RVEEEVFELLDKMRELGCYPTIETYIMLIR 461
K V+ +M K I P + T++ ++ + ++ +M G P ++ ++I
Sbjct: 171 KRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMIS 230
Query: 462 KFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
F K DEV K+ MM++ GV+ S+Y + I L K KEA M G P
Sbjct: 231 GFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKP 290
Query: 522 EPKT 525
T
Sbjct: 291 NTVT 294
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 117/251 (46%), Gaps = 8/251 (3%)
Query: 256 LCRYKNVQDAEHLLFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHD 315
L + + D E L+ +KN ++ ++F L A +++ EM K G
Sbjct: 77 LAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRT 136
Query: 316 VVSYASIMSCYSKSSKLYKVFQLFDQMKNK--KITPDRKVYNAVIHALAKGRLVKEAVNL 373
VVS+ ++++ S +V QLFD+ + ITPD+ Y +I + ++A+ +
Sbjct: 137 VVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEI 196
Query: 374 LQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKR--NITPTIRTFHAFFRIL 431
++ ME V ++ + +++ L KN +DEA+ ++ +M+ + ++ T+
Sbjct: 197 MRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAK 256
Query: 432 RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSY 491
E V EL+++M +G P +Y L+ +C + E K++ + + + R+
Sbjct: 257 ESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLEQPNAATFRT-- 314
Query: 492 IVLIHGLFLNG 502
LI L +NG
Sbjct: 315 --LIFHLCING 323
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 113/252 (44%), Gaps = 19/252 (7%)
Query: 183 LGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGF 242
L K ++F LIE + P + T L +IR Y A+ F + G
Sbjct: 77 LAKSQRFSDIEALIESHKNN---PKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGT 133
Query: 243 QVGIDEFQGLLSALCRYKNVQDAEHLLFCN-----KNVFPLEIKSFNIILNGWCNLIVSA 297
+ F LL+A C + ++ + LF N+ P +I S+ +++ +C+
Sbjct: 134 PRTVVSFNALLAA-CLHSDLFERVPQLFDEFPQRYNNITPDKI-SYGMLIKSYCD-SGKP 190
Query: 298 REAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAV 357
+A + +M +G++ ++++ +I+ K+ + + L+ +M NK D VYN
Sbjct: 191 EKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVR 250
Query: 358 IHALAK--GRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKR 415
+ AK VKE L++ M + PD V+YN L+ C + EAK+V+ + +
Sbjct: 251 LMNAAKESPERVKE---LMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLEQP 307
Query: 416 NITPTIRT--FH 425
N T RT FH
Sbjct: 308 N-AATFRTLIFH 318
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 15/222 (6%)
Query: 311 GIQHDVVSYASIMSCYSKSSKLYKV------FQLFDQMKNKKITP--DRKVYNAVIHALA 362
GI +Y ++ SKL KV ++ + N +P R + LA
Sbjct: 19 GIDSQTTAYPGAITMSKAKSKLRKVQDPDKALAIYKSVSNNSTSPLSSRYAMELTVQRLA 78
Query: 363 KGRLVKEAVNLLQTMEKNNVTPDVVTY-NSLIKPLCKNRKIDEAKEVFNDMMKRNITPTI 421
K + + L+++ KNN T+ ++LI+ + D A ++F +M K T+
Sbjct: 79 KSQRFSDIEALIES-HKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTV 137
Query: 422 RTFHAFFRIL---RVEEEVFELLDKM--RELGCYPTIETYIMLIRKFCRWRKLDEVFKIW 476
+F+A + E V +L D+ R P +Y MLI+ +C K ++ +I
Sbjct: 138 VSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIM 197
Query: 477 NMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKG 518
M GV ++ ++ L+ NG V EA +IEM KG
Sbjct: 198 RDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKG 239
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 114/251 (45%), Gaps = 6/251 (2%)
Query: 169 YAHSVREYHSMI-SILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDV 227
+A R Y +++ + R DTA ++E MR S T ++ + +
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTA-RMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLM 468
Query: 228 GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNI 285
RA R G + LL C+ + AE LL ++ S+NI
Sbjct: 469 DRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNI 528
Query: 286 ILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNK 345
I++G C LI + A ++EM RGI +SY ++M ++ S + ++FD+M N
Sbjct: 529 IIDG-CILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMND 587
Query: 346 -KITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDE 404
++ D +N ++ + L+++A ++ M++N P+V TY SL + + RK +
Sbjct: 588 PRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGD 647
Query: 405 AKEVFNDMMKR 415
A ++ ++ +R
Sbjct: 648 ALLLWKEIKER 658
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 115/268 (42%), Gaps = 9/268 (3%)
Query: 319 YASIMSCYSKSSKLYKVFQLFDQMK---NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQ 375
Y ++M Y K+ ++ ++ + M+ ++ PD Y V+ A L+ A +L
Sbjct: 417 YTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLA 476
Query: 376 TMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMK-RNITPTIRTFHAFFR---IL 431
M + V + +TYN L+K CK +ID A+++ +M + I P + +++ ++
Sbjct: 477 EMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILI 536
Query: 432 RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWN-MMREDGVSHDRSS 490
++MR G PT +Y L++ F + ++++ MM + V D +
Sbjct: 537 DDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIA 596
Query: 491 YIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDLEHNQ 550
+ +L+ G G +++A M+ GF P T L +S + G L
Sbjct: 597 WNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVS-QARKPGDALLLWKEI 655
Query: 551 LEDDTVEKKVKATPSKFDKEKAFLREPE 578
E V+KK + S D L+ E
Sbjct: 656 KERCAVKKKEAPSDSSSDPAPPMLKPDE 683
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 85/195 (43%), Gaps = 12/195 (6%)
Query: 345 KKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKN---NVTPDVVTYNSLIKPLCKNRK 401
K PD ++Y ++ K V + +L+ M + N PD VTY +++
Sbjct: 408 KVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGL 467
Query: 402 IDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMREL----GCYPTIETYI 457
+D A++V +M + + T++ + + ++ D +RE+ G P + +Y
Sbjct: 468 MDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYN 527
Query: 458 MLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRK 517
++I +N MR G++ + SY L+ ++G+ K A+ + EM
Sbjct: 528 IIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEM--- 584
Query: 518 GFLPEPKTEQMLQAW 532
+ +P+ + L AW
Sbjct: 585 --MNDPRVKVDLIAW 597
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 112/235 (47%), Gaps = 11/235 (4%)
Query: 300 AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIH 359
A +++ M K+G++ ++V+ ++++ K+ K+ VF+++ +K+ PD +NA++
Sbjct: 303 ALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLT 362
Query: 360 ALAKGRLVKEAVNLLQTMEKNNVTP-DVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
AL K ++ + L + N+ + YN+ + K ++A ++ +M +T
Sbjct: 363 ALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLT 422
Query: 419 PTIRTFHAFFRIL---RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKL-DEVFK 474
+ +++ R + + + M + C P TY+ L+R C W L DEV
Sbjct: 423 VSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRS-CIWGSLWDEVED 481
Query: 475 IWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
I V D S Y IHG+ L + K A + Y++M+ G P+ KT M+
Sbjct: 482 ILK-----KVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMM 531
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 147/356 (41%), Gaps = 23/356 (6%)
Query: 183 LGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVR--DVGRAINTFYAFKRF 240
L ++ K +A L + MR G P+ + L C +R D+ +A T + F R
Sbjct: 117 LSRLDKVRSALELFDSMRFLGLQPNAHACNSFL-----SCLLRNGDIQKAF-TVFEFMRK 170
Query: 241 GFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIILN----GWCNLIVS 296
V + +L A+ K + A + F P F+++L C I +
Sbjct: 171 KENVTGHTYSLMLKAVAEVKGCESALRM-FRELEREPKRRSCFDVVLYNTAISLCGRINN 229
Query: 297 AREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNA 356
E ER+W M G ++Y+ ++S + + + ++D+M N KI+ A
Sbjct: 230 VYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYA 289
Query: 357 VIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRN 416
+I A K A+ + Q+M K + P++V N+LI L K K+ +V++ +
Sbjct: 290 MISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLG 349
Query: 417 ITPTIRTFHAFFRILRVE---EEVFELLDKMRE--LGCYPT--IETYIMLIRKFCRWRKL 469
P T++A L E+V +L D +R L C T ++ +K W K
Sbjct: 350 HKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEK- 408
Query: 470 DEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT 525
K+ M G++ SSY ++I + K K A Y M ++ P T
Sbjct: 409 --AVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFT 462
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 122/297 (41%), Gaps = 47/297 (15%)
Query: 172 SVRE--YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGR 229
S+RE ++MIS K K+D A + + M G P+LV TL+ + K VG
Sbjct: 281 SLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGK---AGKVGL 337
Query: 230 AINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIILNG 289
+ K G + + LL+AL + +D L F + I+S N+
Sbjct: 338 VFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQL-------FDM-IRSENL---- 385
Query: 290 WCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITP 349
C L ++ + +++SC K K +L +M+ +T
Sbjct: 386 -CCL--------------------NEYLYNTAMVSC-QKLGYWEKAVKLLYEMEGSGLTV 423
Query: 350 DRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVF 409
YN VI A K R K A+ + + M + + P+ TY SL++ DE +++
Sbjct: 424 STSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDIL 483
Query: 410 NDMMKRNITPTIRTFHAFFRILRVEEE---VFELLDKMRELGCYPTIETYIMLIRKF 463
+ + P + ++A + + E EL KMRE+G P +T M+++
Sbjct: 484 -----KKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQNL 535
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 7/155 (4%)
Query: 301 ERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHA 360
+ ++H+M G ++ V + SK + ++ +LF Q+K+K PD + A++ A
Sbjct: 185 QEIFHKMRTEGFTNEAVK---MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEA 241
Query: 361 LAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKI-DEAKEVFNDMMKRNITP 419
A KE + + M + V+P+ TY+ LIK L + K +AK+ +MM ++P
Sbjct: 242 YANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSP 301
Query: 420 TIRTFHAFFRIL---RVEEEVFELLDKMRELGCYP 451
T+ A F EE ELL +M+ G P
Sbjct: 302 NAATYTAVFEAFVREGKEESARELLQEMKGKGFVP 336
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 395 PLCKNRKIDEA------KEVFNDMMKRNIT-PTIRTFHAFFRILRVEEEVFELLDKMREL 447
P K I+E +E+F+ M T ++ F A + R E EL ++++
Sbjct: 168 PFSKKPAIEEPEDPKNLQEIFHKMRTEGFTNEAVKMFDALSKDGRTHE-ALELFSQIKDK 226
Query: 448 GCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKV-KE 506
P + + ++ + + E K++ M GVS + +Y VLI GL +GK K+
Sbjct: 227 NRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKD 286
Query: 507 AHDYYIEMQRKGFLPEPKT-EQMLQAWLSGRQGTEGQVTDL 546
A Y +EM G P T + +A++ R+G E +L
Sbjct: 287 AKKYLLEMMGNGMSPNAATYTAVFEAFV--REGKEESAREL 325
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 114/245 (46%), Gaps = 3/245 (1%)
Query: 282 SFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQ 341
++NI++ G+ N + A + +M GI DV ++ +++S + Y+ +F +
Sbjct: 284 TWNILIGGY-NQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRK 342
Query: 342 MKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRK 401
M + P+ + + A + +++ + + K DV+ NSL+ K K
Sbjct: 343 MFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGK 402
Query: 402 IDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIR 461
+++A++VF+ + +++ + + + +EL +M++ P I T+ +I
Sbjct: 403 LEDARKVFDSVKNKDVYTWNSMITGYCQAGYC-GKAYELFTRMQDANLRPNIITWNTMIS 461
Query: 462 KFCRWRKLDEVFKIWNMMREDG-VSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFL 520
+ + E ++ M +DG V + +++ ++I G NGK EA + + +MQ F+
Sbjct: 462 GYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFM 521
Query: 521 PEPKT 525
P T
Sbjct: 522 PNSVT 526
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 118/254 (46%), Gaps = 10/254 (3%)
Query: 309 KRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVK 368
+R + DV+++ S++ Y ++ K + +L +M+ + I+P +N +I +
Sbjct: 240 RRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCD 299
Query: 369 EAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITP---TIRTFH 425
A++L+Q ME +T DV T+ ++I L N +A ++F M + P TI +
Sbjct: 300 AAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAV 359
Query: 426 AFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVS 485
+ L+V + E+ ++G + L+ + + KL++ K+++ ++ +
Sbjct: 360 SACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVK----N 415
Query: 486 HDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT-EQMLQAWLSGRQGTEGQVT 544
D ++ +I G G +A++ + MQ P T M+ ++ + G EG+
Sbjct: 416 KDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYI--KNGDEGEAM 473
Query: 545 DLEHNQLEDDTVEK 558
DL +D V++
Sbjct: 474 DLFQRMEKDGKVQR 487
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 120/257 (46%), Gaps = 11/257 (4%)
Query: 269 LFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSK 328
LF +VF +E K ++ C I AR +V+ M +R ++ ++++++ YS+
Sbjct: 109 LFTEPDVF-VETKLLSMYAK--CGCIADAR---KVFDSMRER----NLFTWSAMIGAYSR 158
Query: 329 SSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVT 388
++ +V +LF M + PD ++ ++ A V+ + + K ++ +
Sbjct: 159 ENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRV 218
Query: 389 YNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELG 448
NS++ K ++D A + F M +R++ A+ + + EE V EL+ +M + G
Sbjct: 219 SNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAV-ELVKEMEKEG 277
Query: 449 CYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAH 508
P + T+ +LI + + K D + M G++ D ++ +I GL NG +A
Sbjct: 278 ISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQAL 337
Query: 509 DYYIEMQRKGFLPEPKT 525
D + +M G +P T
Sbjct: 338 DMFRKMFLAGVVPNAVT 354
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Query: 274 NVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLY 333
++FP I ++N +++G+C +A+R+ M+ +G DVV+++++++ Y K+ ++
Sbjct: 5 SIFPTTI-TYNSMIDGFCKQ-DRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVD 62
Query: 334 KVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLI 393
++F +M + I + Y +IH + + A +LL M V PD +T++ ++
Sbjct: 63 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 122
Query: 394 KPLCKNRKIDEAKEVFNDMMK 414
LC +++ +A + D+ K
Sbjct: 123 AGLCSKKELRKAFAILEDLQK 143
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
Query: 346 KITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEA 405
I P YN++I K V +A +L +M +PDVVT+++LI CK +++D
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 406 KEVFNDMMKRNITPTIRTF----HAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIR 461
E+F +M +R I T+ H F ++ ++ +LL++M G P T+ ++
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQ-DLLNEMISCGVAPDYITFHCMLA 123
Query: 462 KFCRWRKLDEVFKI 475
C ++L + F I
Sbjct: 124 GLCSKKELRKAFAI 137
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 70/174 (40%), Gaps = 32/174 (18%)
Query: 381 NVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFEL 440
++ P +TYNS+I CK ++D+AK +
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKR--------------------------------M 32
Query: 441 LDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFL 500
LD M GC P + T+ LI +C+ +++D +I+ M G+ + +Y LIHG
Sbjct: 33 LDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQ 92
Query: 501 NGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDLEHNQLEDD 554
G + A D EM G P+ T + A L ++ LE Q +D
Sbjct: 93 VGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSED 146
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 316 VVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQ 375
++Y S++ + K ++ ++ D M +K +PD ++ +I+ K + V + +
Sbjct: 10 TITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFC 69
Query: 376 TMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEE 435
M + + + VTY +LI C+ +D A+++ N+M+ + P TFH L ++
Sbjct: 70 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKK 129
Query: 436 EV---FELLDKMRE 446
E+ F +L+ +++
Sbjct: 130 ELRKAFAILEDLQK 143
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/134 (20%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Query: 249 FQGLLSALCRYKNVQDAEHLL--FCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHE 306
+ ++ C+ V DA+ +L +K P ++ +F+ ++NG+C ++ E
Sbjct: 13 YNSMIDGFCKQDRVDDAKRMLDSMASKGCSP-DVVTFSTLINGYCK-AKRVDNGMEIFCE 70
Query: 307 MSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRL 366
M +RGI + V+Y +++ + + L L ++M + + PD ++ ++ L +
Sbjct: 71 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKE 130
Query: 367 VKEAVNLLQTMEKN 380
+++A +L+ ++K+
Sbjct: 131 LRKAFAILEDLQKS 144
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/414 (20%), Positives = 162/414 (39%), Gaps = 42/414 (10%)
Query: 151 NDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVT 210
N W++A F KQ Y + Y + +LG ++ D A L EVM G P++
Sbjct: 122 NRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDV 181
Query: 211 PQTLLIMIRKYCAVRDVGRAINTFYAFKRFG-FQVGIDEFQGLLSALCRYKNVQDAEHLL 269
+L I Y + +A +T K + + F L+S C+ + ++
Sbjct: 182 YTSL---ISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIV 238
Query: 270 FCNKNV-FPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQ-HDVVSYASIMSCYS 327
+ ++N I++G+ + E E V +M + G DV + SI+ Y
Sbjct: 239 LEMSYLGVGCSTVTYNTIIDGYGKAGM-FEEMESVLADMIEDGDSLPDVCTLNSIIGSYG 297
Query: 328 KSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVV 387
+ K+ + + + + PD +N +I + K + K+ +++ MEK + V
Sbjct: 298 NGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTV 357
Query: 388 TYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMREL 447
TYN +I+ K +I++ +VF KM+
Sbjct: 358 TYNIVIETFGKAGRIEKMDDVFR--------------------------------KMKYQ 385
Query: 448 GCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEA 507
G P TY L+ + + + ++ + + V D + +I+ G +
Sbjct: 386 GVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATM 445
Query: 508 HDYYIEMQRKGFLPEPKT-EQMLQAWLSGRQGTEGQVTDLEHNQLEDDTVEKKV 560
+ YI+M+ + P+ T M++ + + G V +LE + D +K++
Sbjct: 446 KELYIQMEERKCKPDKITFATMIKTYTA--HGIFDAVQELEKQMISSDIGKKRL 497
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 108/271 (39%), Gaps = 40/271 (14%)
Query: 291 CNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPD 350
C + + +++ ++++RG+ D + +++ YSK+ L ++LFD+M + +
Sbjct: 119 CARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVAS- 177
Query: 351 RKVYNAVIHALAKGRLVKEAVNLLQTMEKNNV---------------------------- 382
+NA+I L G EA+ L + ME +
Sbjct: 178 ---WNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFH 234
Query: 383 ---TPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFE 439
+V+ N+ I K +D+A +VF + T T F + E
Sbjct: 235 GYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALE 294
Query: 440 LLDKMRELGCYPTIETYIMLIRKFCRWRKLDEV-FKIWNMMREDGVSHDRSSYIVLIHGL 498
+ DK+ + G P +Y+ + CR L E ++N M GV + Y ++ L
Sbjct: 295 IFDKLEDNGIKPDDVSYLAALTA-CRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLL 353
Query: 499 FLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
G+++EAHD M +P+P Q L
Sbjct: 354 SRAGRLREAHDIICSMS---MIPDPVLWQSL 381
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 7/143 (4%)
Query: 289 GWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKIT 348
G C+ + +E E ++H S + +VS A+I YSK + K +Q+F+Q KK
Sbjct: 218 GACSHLGDVKEGENIFHGYSNDNV---IVSNAAI-DMYSKCGFVDKAYQVFEQFTGKKSV 273
Query: 349 PDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEV 408
+N +I A A+ + +E N + PD V+Y + + ++ V
Sbjct: 274 V---TWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSV 330
Query: 409 FNDMMKRNITPTIRTFHAFFRIL 431
FN+M + + ++ + +L
Sbjct: 331 FNNMACKGVERNMKHYGCVVDLL 353
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 73/130 (56%), Gaps = 1/130 (0%)
Query: 282 SFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQ 341
++ I +N +C L +AE ++ EM K+G VV+Y++IM Y K+ +L +L +
Sbjct: 390 TYAIAINAYCRL-EKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAK 448
Query: 342 MKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRK 401
MK + P+ +YN++I + ++ A + + M++ V PD V+Y S+I ++++
Sbjct: 449 MKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKE 508
Query: 402 IDEAKEVFND 411
++ E++ +
Sbjct: 509 LERCVELYQE 518
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 99/239 (41%), Gaps = 35/239 (14%)
Query: 164 GKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCA 223
KQ G+A +V+ Y W + E G T I I YC
Sbjct: 364 SKQRGFAEAVKVYE---------------WAMKEECEAGQV--------TYAIAINAYCR 400
Query: 224 VRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLF------CNKNVFP 277
+ +A F + GF + + ++ + + + DA L+ C N++
Sbjct: 401 LEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIW- 459
Query: 278 LEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQ 337
I + I ++G + R AE++W EM + + D VSY S++S Y++S +L + +
Sbjct: 460 --IYNSLIDMHG---RAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVE 514
Query: 338 LFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPL 396
L+ + + + DR + ++ +K + E + LLQ M+ D Y+S + L
Sbjct: 515 LYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNAL 573
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 6/225 (2%)
Query: 297 ARE---AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKV 353
ARE E+++ E + + D ++ Y + + ++ M+ ++ +
Sbjct: 296 AREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCI 355
Query: 354 YNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMM 413
A+++ +K R EAV + + K VTY I C+ K ++A+ +F++M+
Sbjct: 356 LCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMV 415
Query: 414 KRNITPTIRTFHAFFRI---LRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLD 470
K+ + + + R + L+ KM++ GC P I Y LI R L
Sbjct: 416 KKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLR 475
Query: 471 EVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQ 515
KIW M+ V D+ SY +I + +++ + Y E +
Sbjct: 476 RAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFR 520
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 137/330 (41%), Gaps = 14/330 (4%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y + S L K + A ++E M+ G S + ++IR + R+V + T
Sbjct: 251 YTIVCSSLAKSGRAFEALEVLEEMKDKGIPES---SELYSMLIRAFAEAREV---VITEK 304
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIILNGWCNLIV 295
FK G + + + + L + Y + E L + E+K + IL N
Sbjct: 305 LFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFS 364
Query: 296 SAR---EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRK 352
R EA +V+ K + V+YA ++ Y + K K LFD+M K
Sbjct: 365 KQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVV 424
Query: 353 VYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDM 412
Y+ ++ K R + +AV L+ M++ P++ YNSLI + + A++++ +M
Sbjct: 425 AYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEM 484
Query: 413 MKRNITPTIRTFHAFFRILRVEEEVFELLDKMREL----GCYPTIETYIMLIRKFCRWRK 468
+ + P ++ + +E+ ++ +E G IM + F + +
Sbjct: 485 KRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIM-VGVFSKTSR 543
Query: 469 LDEVFKIWNMMREDGVSHDRSSYIVLIHGL 498
+DE+ ++ M+ +G D Y ++ L
Sbjct: 544 IDELMRLLQDMKVEGTRLDARLYSSALNAL 573
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 99/250 (39%), Gaps = 15/250 (6%)
Query: 189 FDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDE 248
+T ++ MR VT L ++ + R A+ + + + G
Sbjct: 334 METTLEVVAAMRKAELK---VTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVT 390
Query: 249 FQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIILNGWCNLI------VSAREAER 302
+ ++A CR + AE L + K F+ + + N++ +A R
Sbjct: 391 YAIAINAYCRLEKYNKAEMLFD------EMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVR 444
Query: 303 VWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALA 362
+ +M +RG + ++ Y S++ + ++ L + +++ +MK K+ PD+ Y ++I A
Sbjct: 445 LMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYN 504
Query: 363 KGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIR 422
+ + ++ V L Q N D ++ K +IDE + DM R
Sbjct: 505 RSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDAR 564
Query: 423 TFHAFFRILR 432
+ + LR
Sbjct: 565 LYSSALNALR 574
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 94/217 (43%), Gaps = 9/217 (4%)
Query: 311 GIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKIT----PDRKVYNAVIHALAKGRL 366
G++ Y IM + K + +KV +LF + K+++++ +Y V +LAK
Sbjct: 204 GVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESGSIYTIVCSSLAKSGR 263
Query: 367 VKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITP----TIR 422
EA+ +L+ M+ + Y+ LI+ + R++ +++F + + + ++
Sbjct: 264 AFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLK 323
Query: 423 TFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMRED 482
+ R + E E++ MR+ T ++ F + R E K++ ++
Sbjct: 324 VVLMYVREGNM-ETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKE 382
Query: 483 GVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGF 519
+ +Y + I+ K +A + EM +KGF
Sbjct: 383 ECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGF 419
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 109/234 (46%), Gaps = 11/234 (4%)
Query: 300 AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKN-KKITPDRKVYNAVI 358
A++++ EM + G++ V Y ++++ Y++S+ + F + D+MK+ + PD Y+ ++
Sbjct: 143 AQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLL 202
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMM-KRNI 417
A +L + M++ +TP+ VT N ++ + + D+ ++V +DM+
Sbjct: 203 KACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTAC 262
Query: 418 TPTIRTFHAFFRI------LRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDE 471
P + T + + + + E +E K R G P T+ +LI + + R D+
Sbjct: 263 KPDVWTMNIILSVFGNMGKIDMMESWYE---KFRNFGIEPETRTFNILIGSYGKKRMYDK 319
Query: 472 VFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT 525
+ + MR+ S+Y +I G K + +M+ +G + KT
Sbjct: 320 MSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKT 373
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 111/250 (44%), Gaps = 17/250 (6%)
Query: 288 NGWCNLI---VSAREAERVWHEM--------SKRGIQHDVVSYASIMSCYSKSSKLYKVF 336
NGW N + +S A++ W + + Q +Y ++ KS + +
Sbjct: 85 NGWVNTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQ 144
Query: 337 QLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEK-NNVTPDVVTYNSLIKP 395
+LFD+M + + P ++Y A++ A + L+ +A ++L M+ PDV TY++L+K
Sbjct: 145 KLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKA 204
Query: 396 LCKNRKIDEAKEVFNDMMKRNITPTIRT----FHAFFRILRVEEEVFELLDKMRELGCYP 451
+ D ++ +M +R ITP T + R+ R ++ L D + C P
Sbjct: 205 CVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKP 264
Query: 452 TIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYY 511
+ T +++ F K+D + + R G+ + ++ +LI G + ++ +
Sbjct: 265 DVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILI-GSYGKKRMYDKMSSV 323
Query: 512 IEMQRKGFLP 521
+E RK P
Sbjct: 324 MEYMRKLEFP 333
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 87/214 (40%), Gaps = 37/214 (17%)
Query: 336 FQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKP 395
+LF +M + + + Y +I L + A + + M + V PD++TYN L+
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 396 LCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIET 455
LCKN K+++A + E+ ++L + G P + T
Sbjct: 61 LCKNGKLEKA-----------------------LVAGKVEDGWDLFCSLSLKGVKPNVVT 97
Query: 456 YIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQ 515
Y +I FC+ +E + ++ M+EDG D +Y LI +G + + EM+
Sbjct: 98 YTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMR 157
Query: 516 RKGFLPEPKTEQMLQAWLSGRQGTEGQVTDLEHN 549
F +G T G VTD+ H+
Sbjct: 158 SCRF--------------AGDASTYGLVTDMLHD 177
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 12/155 (7%)
Query: 303 VWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALA 362
++ EMS+RG+ + V+Y +++ ++ ++F +M + + PD YN ++ L
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 363 K-GRLVKEAV--------NLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMM 413
K G+L K V +L ++ V P+VVTY ++I CK +EA +F M
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMK 122
Query: 414 KRNITPTIRTFHAFFRI-LRVEEEV--FELLDKMR 445
+ P T++ R LR ++ EL+ +MR
Sbjct: 123 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMR 157
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 277 PLEIKSFNIILNGWC-----NLIVSAREAERVWH---EMSKRGIQHDVVSYASIMSCYSK 328
P +I ++NI+L+G C + A + E W +S +G++ +VV+Y +++S + K
Sbjct: 48 PPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCK 107
Query: 329 SSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVT 388
+ + LF +MK PD YN +I A + + L++ M D T
Sbjct: 108 KGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDAST 167
Query: 389 YNSLIKPLCKNRKIDEA 405
Y L+ + + ++D+
Sbjct: 168 YG-LVTDMLHDGRLDKG 183
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 7/146 (4%)
Query: 309 KRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVK 368
+ + D+V +++M Y+K + ++FD K D ++N ++ A A+ L
Sbjct: 403 RHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK----DLILWNTLLAAYAESGLSG 458
Query: 369 EAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFF 428
EA+ L M+ V P+V+T+N +I L +N ++DEAK++F M I P + ++
Sbjct: 459 EALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMM 518
Query: 429 RIL---RVEEEVFELLDKMRELGCYP 451
+ EE L KM+E G P
Sbjct: 519 NGMVQNGCSEEAILFLRKMQESGLRP 544
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 109/236 (46%), Gaps = 6/236 (2%)
Query: 286 ILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNK 345
+LN +C + + AE V+ M + DVV++ I+S Y + + + M+ +
Sbjct: 315 LLNFYCKVGL-IEYAEMVFDRM----FEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLE 369
Query: 346 KITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEA 405
K+ D ++ A A+ +K + +++ D+V ++++ K I +A
Sbjct: 370 KLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDA 429
Query: 406 KEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCR 465
K+VF+ +++++ T A + + E L M+ G P + T+ ++I R
Sbjct: 430 KKVFDSTVEKDLI-LWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLR 488
Query: 466 WRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
++DE ++ M+ G+ + S+ +++G+ NG +EA + +MQ G P
Sbjct: 489 NGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRP 544
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 104/243 (42%), Gaps = 15/243 (6%)
Query: 302 RVWHEMSKRGIQHD--VVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIH 359
R H R +QH V S++ Y+K + K ++F K+ + + NA+I
Sbjct: 566 RTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVF----GSKLYSELPLSNAMIS 621
Query: 360 ALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMM-KRNIT 418
A A +KEA+ L +++E + PD +T +++ I++A E+F D++ KR++
Sbjct: 622 AYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMK 681
Query: 419 PTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNM 478
P + + +L E + L + E+ P L+ + RK + V +
Sbjct: 682 PCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRK 741
Query: 479 MREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAW--LSGR 536
+ E + +Y+ + + + G E M+ KG +P +W ++G
Sbjct: 742 LLESE-PENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGC-----SWIQITGE 795
Query: 537 QGT 539
+G
Sbjct: 796 EGV 798
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 107/243 (44%), Gaps = 27/243 (11%)
Query: 269 LFCNKNVFPLEIKSF----NIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMS 324
L C K + +++ + + N ++ V W + + + + DV S+ +++
Sbjct: 514 LMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ--KKDVTSWNILLT 571
Query: 325 CYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTP 384
YS+ + V +LFD+M ++ PD + +++ +K ++V++ + ME VTP
Sbjct: 572 GYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTP 631
Query: 385 DVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE---------- 434
++ Y ++ L + ++ EA + M +TP + A R+
Sbjct: 632 NLKHYACVVDLLGRAGELQEAHKFIQKM---PVTPDPAVWGALLNACRIHHKIDLGELSA 688
Query: 435 EEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVL 494
+ +FEL K ++ YI+L + K EV K+ MM+E+G++ D V
Sbjct: 689 QHIFELDKK--------SVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVE 740
Query: 495 IHG 497
+ G
Sbjct: 741 VKG 743
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 82/172 (47%), Gaps = 9/172 (5%)
Query: 276 FPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKV 335
F ++I N + + N S REAE+++ M ++ D+VS+ +++S Y + K
Sbjct: 328 FAVDISVCNSLTQMYLN-AGSWREAEKLFSRMERK----DIVSWTTMISGYEYNFLPDKA 382
Query: 336 FQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKP 395
+ M + PD AV+ A A + V L + K + V+ N+LI
Sbjct: 383 IDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINM 442
Query: 396 LCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMREL 447
K + ID+A ++F+++ ++N+ ++ + LR+ FE L +R++
Sbjct: 443 YSKCKCIDKALDIFHNIPRKNVI----SWTSIIAGLRLNNRCFEALIFLRQM 490
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 90/200 (45%), Gaps = 10/200 (5%)
Query: 338 LFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLC 397
+F M+ + D YN +IH L K EA N+ + + + PDV TYN +I+
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRF-- 58
Query: 398 KNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYI 457
+ A++++ +M++R + P T+++ L + + L + R++ + T+
Sbjct: 59 --SSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNK----LAQARKVS--KSCSTFN 110
Query: 458 MLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRK 517
LI +C+ ++ + ++ M G+ + +Y LIHG G A D + EM
Sbjct: 111 TLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSN 170
Query: 518 GFLPEPKTEQMLQAWLSGRQ 537
G T + + L R+
Sbjct: 171 GVYSSSITFRDILPQLCSRK 190
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 79/177 (44%), Gaps = 39/177 (22%)
Query: 278 LEIKSFNIILNGWC-------------NLIVSARE-----------------AERVWHEM 307
++ +NII++G C NL++S + AE+++ EM
Sbjct: 12 MDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSLGRAEKLYAEM 71
Query: 308 SKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLV 367
+RG+ D ++Y S++ K +KL + +K++ +N +I+ K V
Sbjct: 72 IRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLINGYCKATRV 122
Query: 368 KEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTF 424
K+ +NL M + + +V+TY +LI + + A ++F +M+ + + TF
Sbjct: 123 KDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITF 179
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 91/211 (43%), Gaps = 19/211 (9%)
Query: 176 YHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFY 235
Y+ +I L K KFD A N+ + G P + QT +MIR +GRA +
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDV---QTYNMMIR----FSSLGRAEKLYA 69
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIILNGWCNLIV 295
R G + ++ LC+ + A + +FN ++NG+C
Sbjct: 70 EMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV--------SKSCSTFNTLINGYCK-AT 120
Query: 296 SAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYN 355
++ ++ EM +RGI +V++Y +++ + + +F +M + + +
Sbjct: 121 RVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFR 180
Query: 356 AVIHALAKGRLVKEAVNLL---QTMEKNNVT 383
++ L + +++AV +L +M NNVT
Sbjct: 181 DILPQLCSRKELRKAVAMLLQKSSMVSNNVT 211
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 158/388 (40%), Gaps = 38/388 (9%)
Query: 149 IRNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSL 208
I W+ F W +Q G SV Y S I +G + A + + + T ++
Sbjct: 110 ISGRWQDLIQLFEWM-QQHGKI-SVSTYSSCIKFVGA-KNVSKALEIYQSIPDESTKINV 166
Query: 209 VTPQTLLIMIRKYCAVRD--VGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKN--VQD 264
++L C V++ + I F KR G + + + LL+ + KN +
Sbjct: 167 YICNSIL-----SCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKA 221
Query: 265 AEHLLFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMS 324
E + N ++ + +L C + EAE +M G ++ Y+S+++
Sbjct: 222 IELIGELPHNGIQMDSVMYGTVL-AICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLN 280
Query: 325 CYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTP 384
YS K +L +MK+ + P++ + ++ KG L + LL +E
Sbjct: 281 SYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAE 340
Query: 385 DVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRN-----------ITPTIRT--FHAFFRIL 431
+ + Y L+ L K K++EA+ +F+DM + I+ R+ F +
Sbjct: 341 NEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELS 400
Query: 432 RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSY 491
R E +E D + ++ +CR +++ V ++ M E VS D +++
Sbjct: 401 RDSETTYEKCD----------LVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTF 450
Query: 492 IVLIHGLFLNGKVK-EAHDYYIEMQRKG 518
+LI F+ K+ A+ ++M KG
Sbjct: 451 HILIK-YFIKEKLHLLAYQTTLDMHSKG 477
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 80/399 (20%), Positives = 155/399 (38%), Gaps = 50/399 (12%)
Query: 177 HSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYA 236
+S++S L K K D+ L + M+ G P +VT TLL K +AI
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIK--VKNGYPKAIELIGE 227
Query: 237 FKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL--------------------------- 269
G Q+ + +L+ ++AE+ +
Sbjct: 228 LPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGD 287
Query: 270 FCNKNVFPLEIKSFNIILNGWC-----------NLIVSAREAERVWHEMSKRGIQHDVVS 318
+ + E+KS ++ N L +RE + E+ G + +
Sbjct: 288 YKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRE---LLSELESAGYAENEMP 344
Query: 319 YASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTME 378
Y +M SK+ KL + +FD MK K + D + +I AL + + KEA L + E
Sbjct: 345 YCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSE 404
Query: 379 KNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEV- 437
D+V N+++ C+ +++ + M ++ ++P TFH + ++E++
Sbjct: 405 TTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYF-IKEKLH 463
Query: 438 ---FELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVL 494
++ M G E LI + R E F ++NM+R + + + +
Sbjct: 464 LLAYQTTLDMHSKGHRLEEELCSSLIYHLGKIRAQAEAFSVYNMLRYSKRTICKELHEKI 523
Query: 495 IHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWL 533
+H L +K+A Y + + +P ++ +A++
Sbjct: 524 LHILIQGNLLKDA--YIVVKDNAKMISQPTLKKFGRAFM 560
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 117/268 (43%), Gaps = 40/268 (14%)
Query: 300 AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIH 359
A + ++ +RG + VV + S++S Y+K+ L + LF+ M + I NA++
Sbjct: 61 ARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIV----TCNAMLT 116
Query: 360 ALAKGRLVKEAVNLLQTMEKNNVT--------------------------PDVVTYNSLI 393
K R + EA L + M KN V+ +VV++N+L+
Sbjct: 117 GYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLV 176
Query: 394 KPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTI 453
L +N +++AK+VF+ M R++ + +EE L M E +
Sbjct: 177 TGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKL-LFGDMSE----KNV 231
Query: 454 ETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIE 513
T+ ++ +CR+ + E ++++ M E + S+ +I G N +EA ++E
Sbjct: 232 VTWTSMVYGYCRYGDVREAYRLFCEMPERNI----VSWTAMISGFAWNELYREALMLFLE 287
Query: 514 MQRKGFLPEPKTEQMLQ-AWLSGRQGTE 540
M++ P E ++ A+ G G E
Sbjct: 288 MKKDVDAVSPNGETLISLAYACGGLGVE 315
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 108/243 (44%), Gaps = 18/243 (7%)
Query: 291 CNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPD 350
C L+ +AR+ + + + +VV + +++S ++K + + F LF QM + I P+
Sbjct: 259 CRLLDNARK-------LFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPN 311
Query: 351 RKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFN 410
+ A++ + + ++ ++ M +N + D V + S I + I A+ VF+
Sbjct: 312 QCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFD 371
Query: 411 DMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLD 470
M +RN+ +A F I + EE + KM+ P T++ L+ +
Sbjct: 372 MMPERNVISWSSMINA-FGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVK 430
Query: 471 EVFKIW-NMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
E +K + +M R+ GV + Y ++ L G++ EA K F+ + M
Sbjct: 431 EGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEA---------KSFIDNMPVKPMA 481
Query: 530 QAW 532
AW
Sbjct: 482 SAW 484
>AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8183594-8185180 REVERSE
LENGTH=501
Length = 501
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 12/186 (6%)
Query: 356 AVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVT---YNSLIKPLCKNRKIDEAKEVFNDM 412
AVI L + + E + + T + N+ P ++ Y +I+ LC+ + + EA F M
Sbjct: 100 AVIRFLRQSSRLHEILPVFDTWK--NLEPSRISENNYERIIRFLCEEKSMSEAIRAFRSM 157
Query: 413 MK-RNITPTIRTF----HAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWR 467
+ ++P++ + H++ + EE +F L+ M+E G P ETY LI + +W+
Sbjct: 158 IDDHELSPSLEIYNSIIHSYADDGKFEEAMF-YLNHMKENGLLPITETYDGLIEAYGKWK 216
Query: 468 KLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT-E 526
DE+ M DG D +Y +LI G +K Y + + EP T
Sbjct: 217 MYDEIVLCLKRMESDGCVRDHVTYNLLIREFSRGGLLKRMEQMYQSLMSRKMTLEPSTLL 276
Query: 527 QMLQAW 532
ML+A+
Sbjct: 277 SMLEAY 282
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 9/145 (6%)
Query: 328 KSSKLYKVFQLFDQMKNKKITPDR---KVYNAVIHALAKGRLVKEAVNLLQTM-EKNNVT 383
+SS+L+++ +FD KN + P R Y +I L + + + EA+ ++M + + ++
Sbjct: 107 QSSRLHEILPVFDTWKN--LEPSRISENNYERIIRFLCEEKSMSEAIRAFRSMIDDHELS 164
Query: 384 PDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL---RVEEEVFEL 440
P + YNS+I + K +EA N M + + P T+ ++ +E+
Sbjct: 165 PSLEIYNSIIHSYADDGKFEEAMFYLNHMKENGLLPITETYDGLIEAYGKWKMYDEIVLC 224
Query: 441 LDKMRELGCYPTIETYIMLIRKFCR 465
L +M GC TY +LIR+F R
Sbjct: 225 LKRMESDGCVRDHVTYNLLIREFSR 249
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 122/290 (42%), Gaps = 39/290 (13%)
Query: 282 SFNIILNGWCNL--IVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLF 339
++N IL+ + +VSAR V+ EMS+R DVV+++S++ Y K + K ++F
Sbjct: 176 TWNSILDAYAKSGDVVSAR---LVFDEMSER----DVVTWSSMIDGYVKRGEYNKALEIF 228
Query: 340 DQMKNKKITPDRKVYN-AVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCK 398
DQM + +V +VI A A + + + + ++ V+ SLI K
Sbjct: 229 DQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAK 288
Query: 399 NRKIDEAKEVF-------NDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYP 451
I +A VF D + N H F R E +L KMRE P
Sbjct: 289 CGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIR------ESLQLFHKMRESKIDP 342
Query: 452 TIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYY 511
T++ L+ + E + + ++E G Y ++ L G VK+AHD+
Sbjct: 343 DEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFI 402
Query: 512 IEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDLEHNQLE-DDTVEKKV 560
EM P T ML A L+G + H LE +TV KK+
Sbjct: 403 SEM------PIKPTGSMLGALLNGC---------INHGNLELAETVGKKL 437
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 126/283 (44%), Gaps = 48/283 (16%)
Query: 273 KNVFPLEIKSFNIILNGW--CNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSS 330
K F E + N +L+ + C + SA+ V+ EMS R VVSY S+++ Y++
Sbjct: 324 KACFSREDRFCNTLLDMYSKCGDLDSAKA---VFREMSDR----SVVSYTSMIAGYAREG 376
Query: 331 KLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYN 390
+ +LF++M+ + I+PD AV++ A+ RL+ E + + +++N++ D+ N
Sbjct: 377 LAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN 436
Query: 391 SLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEE--EVFELL------- 441
+L+ K + EA+ VF++M ++I + + E +F LL
Sbjct: 437 ALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFS 496
Query: 442 -------------------DKMRELGCYPTIETYI-------MLIRKFCRWRKLDEVFKI 475
DK RE+ Y Y L+ + + L +
Sbjct: 497 PDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL----LL 552
Query: 476 WNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKG 518
+M+ +D S D S+ V+I G ++G KEA + +M++ G
Sbjct: 553 AHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAG 595
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/375 (19%), Positives = 158/375 (42%), Gaps = 22/375 (5%)
Query: 164 GKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCA 223
G + ++ R ++++ + K D+A + M + S+V+ + MI Y
Sbjct: 322 GVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREM----SDRSVVSYTS---MIAGYAR 374
Query: 224 VRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL-FCNKNVFPLEIKS 282
G A+ F + G + +L+ RY+ + + + + + +N +I
Sbjct: 375 EGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFV 434
Query: 283 FNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQM 342
N +++ + S +EAE V+ EM + D++S+ +I+ YSK+ + LF+ +
Sbjct: 435 SNALMDMYAK-CGSMQEAELVFSEMRVK----DIISWNTIIGGYSKNCYANEALSLFNLL 489
Query: 343 -KNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRK 401
+ K+ +PD + V+ A A + + + +N D NSL+ K
Sbjct: 490 LEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGA 549
Query: 402 IDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIR 461
+ A +F+D+ +++ + A + + +E L ++MR+ G +++ L+
Sbjct: 550 LLLAHMLFDDIASKDLV-SWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLY 608
Query: 462 KFCRWRKLDEVFKIWNMMR-EDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFL 520
+DE ++ +N+MR E + Y ++ L G + +A+ + M
Sbjct: 609 ACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENM------ 662
Query: 521 PEPKTEQMLQAWLSG 535
P P + A L G
Sbjct: 663 PIPPDATIWGALLCG 677
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 116/241 (48%), Gaps = 7/241 (2%)
Query: 204 TGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRF-GFQVGIDEFQGLLSALCRYKNV 262
+G +VT +L +++ C ++ RA G + I F+ ++ + +
Sbjct: 203 SGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDF 262
Query: 263 QDAEHLL-FCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYAS 321
++ + +L K L++ S+ ++++G+ + EAER+ M + ++ + Y
Sbjct: 263 EELDLVLKLMEKESVMLDLDSYKVLIDGFTSY-GKVEEAERLVLMMHDKKLRVESYLYNL 321
Query: 322 IMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNN 381
IM+ YS+ + KV +L+ +M ++ +TP++ Y +++ L K V EA++ L + N
Sbjct: 322 IMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNE 381
Query: 382 VTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITP--TI--RTFHAFFRILRVEEEV 437
D Y++L + + ID++ EV +M++ P TI R + F + R E ++
Sbjct: 382 FEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSLFEVNRKEAQM 441
Query: 438 F 438
Sbjct: 442 L 442
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 111/234 (47%), Gaps = 13/234 (5%)
Query: 311 GIQHDVVS--YASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVK 368
G + VV + S++ YS + K +V ++F+ MKN ++ D K + L + ++
Sbjct: 132 GCEKKVVGRFFNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQME 191
Query: 369 EAVNLLQTMEKNNVTPDVVTYNSL---IKPLCKNRKIDEAKEVFNDM-MKRNITPTIRTF 424
A + M ++ + DVVT SL + LC N +I A+E+ +M + + + I TF
Sbjct: 192 LARDFFSLMVESGI--DVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTF 249
Query: 425 HAFFRILRVEEEVFELLDKMREL----GCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMR 480
+ V+ FE LD + +L +++Y +LI F + K++E ++ MM
Sbjct: 250 KSMIGCC-VKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMH 308
Query: 481 EDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLS 534
+ + + Y ++++G G V++ + Y EM +G P T +L L
Sbjct: 309 DKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLC 362
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 3/152 (1%)
Query: 373 LLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAF---FR 429
+L+ MEK +V D+ +Y LI K++EA+ + M + + ++ +
Sbjct: 268 VLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYS 327
Query: 430 ILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRS 489
+ E+V EL +M G P +TY +L+ C+ K+ E N +R + D
Sbjct: 328 RFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEE 387
Query: 490 SYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLP 521
Y L + G + ++ + EM R GF+P
Sbjct: 388 MYSTLSEECYRVGMIDKSLEVVAEMIRDGFIP 419
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/393 (20%), Positives = 164/393 (41%), Gaps = 51/393 (12%)
Query: 153 WEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQ 212
WE+A F +Q Y +V Y +I +LGK ++ + A L + M G
Sbjct: 130 WESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEG--------- 180
Query: 213 TLLIMIRKYCAV-RDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFC 271
C V +V A+ + A+ R G F + L R K+ + +
Sbjct: 181 ---------CVVNHEVYTALVS--AYSRSG------RFDAAFTLLERMKSSHNCQP---- 219
Query: 272 NKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSK 331
++ +++I++ + + + + + + +M ++GI+ + ++Y +++ Y K+
Sbjct: 220 -------DVHTYSILIKSFLQ-VFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKM 271
Query: 332 LYKVFQLFDQMKNKK-ITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYN 390
++ QM + PD N+ + A ++ N + + + + P++ T+N
Sbjct: 272 FVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFN 331
Query: 391 SLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFH----AFFRI--LRVEEEVFELLDKM 444
L+ K+ + V M K + + TI T++ AF R L+ E +F L+
Sbjct: 332 ILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSE 391
Query: 445 RELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKV 504
R +P+ T L+R + R K D++ + + + D + L+ K
Sbjct: 392 R---IFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKF 448
Query: 505 KEAHDYYIEMQRKGFLPEPKT-EQMLQAW-LSG 535
E M++KGF P+ T M++A+ +SG
Sbjct: 449 AEMKGVLELMEKKGFKPDKITYRTMVKAYRISG 481
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 115/279 (41%), Gaps = 25/279 (8%)
Query: 156 AFTFFLWAGKQPGYAHSVREYHSMISILGKMRKF---DTAWNLIEVMRGGGTGPSLVTPQ 212
F F WA +QP + H YH I LG + + D N + +R G
Sbjct: 155 CFHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGN------EN 208
Query: 213 TLLIMIRKYCAVRDVGRAINTF---YAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHL- 268
+I + + RA+N F K + I + L AL N H+
Sbjct: 209 LYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVY 268
Query: 269 ------LF---CNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSK-RGIQHDVVS 318
LF + + P ++ + N ++ G+ L + +A R++H+MS + + +
Sbjct: 269 METVRSLFRQMVDSGIEP-DVFALNCLVKGYV-LSLHVNDALRIFHQMSVVYDCEPNSFT 326
Query: 319 YASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTME 378
Y ++ + +L +MK K P+ K YN++++A A + +AV L M
Sbjct: 327 YDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMI 386
Query: 379 KNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNI 417
+N D ++Y +L+ C+ K DEA + + ++ +
Sbjct: 387 ENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQL 425
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 5/168 (2%)
Query: 335 VFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEK-NNVTPDVVTYNSLI 393
V LF QM + I PD N ++ V +A+ + M + P+ TY+ LI
Sbjct: 272 VRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLI 331
Query: 394 KPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEV---FELLDKMRELGCY 450
LC + A+E+ ++M + P +++++ + E+ + L +M E G
Sbjct: 332 HGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRV 391
Query: 451 PTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGL 498
+Y L+ + CR K DE ++ M+RE + DR SY L++ L
Sbjct: 392 VDFISYRTLVDESCRKGKYDEATRLLEMLREKQLV-DRDSYDKLVNVL 438
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 22/216 (10%)
Query: 333 YKVFQLFD-QMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNS 391
+ F LF+ + + T + Y+ I L ++ +E +++ + + YNS
Sbjct: 153 FLCFHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNS 212
Query: 392 LIKPLCKNRKIDEAKEVFNDMM-KRNIT--PTIRTFHAFFRILRVE-----------EEV 437
+I K K+ A +F M+ +N+ PTIRT+H F+ L E V
Sbjct: 213 IIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETV 272
Query: 438 FELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRS----SYIV 493
L +M + G P + L++ + +++ +I++ M V +D +Y
Sbjct: 273 RSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQM---SVVYDCEPNSFTYDY 329
Query: 494 LIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
LIHGL G+ A + EM+ KGF+P K+ L
Sbjct: 330 LIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSL 365
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 19/206 (9%)
Query: 319 YASIMSCYSKSSKLYKVFQLFDQM---KNKKITPDRKVYNAVIHALAKGRLVKEAVN--- 372
Y SI+ ++K+ KL + +F M KN + P + Y+ + AL GR +N
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALL-GRGNNSYINHVY 268
Query: 373 ------LLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDM-MKRNITPTIRTFH 425
L + M + + PDV N L+K + +++A +F+ M + + P T+
Sbjct: 269 METVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYD 328
Query: 426 AFFRILRVEEEVF---ELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFK-IWNMMRE 481
L + ELL +M+ G P ++Y L+ F ++D+ K +W M+ E
Sbjct: 329 YLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMI-E 387
Query: 482 DGVSHDRSSYIVLIHGLFLNGKVKEA 507
+G D SY L+ GK EA
Sbjct: 388 NGRVVDFISYRTLVDESCRKGKYDEA 413
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 4/168 (2%)
Query: 317 VSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQT 376
++Y S+++CY K K L ++MK ITP YN+++ K ++ ++Q
Sbjct: 124 LTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQE 183
Query: 377 MEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRN-ITPTIRTFHAFFRI---LR 432
++ NV PD TYN ++ L I + V +M + + P T+ I
Sbjct: 184 LKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAG 243
Query: 433 VEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMR 480
+ ++ + L ++ Y LI + R KL EV++IW +R
Sbjct: 244 LSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLR 291
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 114/252 (45%), Gaps = 6/252 (2%)
Query: 280 IKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLF 339
+ S+N IL+ + L +A + EM G++ D+V++ S++S Y+ +
Sbjct: 155 LSSWNSILSSYTKLGY-VDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVL 213
Query: 340 DQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKN 399
+M+ + P ++++ A+A+ +K + + +N + DV +LI K
Sbjct: 214 KRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKT 273
Query: 400 RKIDEAKEVFNDMMKRNITP--TIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYI 457
+ A+ VF+ M +NI ++ + ++ +L+ E L+ +M + G P T+
Sbjct: 274 GYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEA---LMIRMEKEGIKPDAITWN 330
Query: 458 MLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRK 517
L + K ++ + M+E GV+ + S+ + G NG + A +I+MQ +
Sbjct: 331 SLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEE 390
Query: 518 GFLPEPKTEQML 529
G P T L
Sbjct: 391 GVGPNAATMSTL 402
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 7/153 (4%)
Query: 312 IQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAV 371
+ +DV +++ Y K+ L +FD M K I +N+++ L+ L+K+A
Sbjct: 256 LWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVA----WNSLVSGLSYACLLKDAE 311
Query: 372 NLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL 431
L+ MEK + PD +T+NSL K ++A +V M ++ + P + ++ A F
Sbjct: 312 ALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGC 371
Query: 432 RVE---EEVFELLDKMRELGCYPTIETYIMLIR 461
++ KM+E G P T L++
Sbjct: 372 SKNGNFRNALKVFIKMQEEGVGPNAATMSTLLK 404
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 104/231 (45%), Gaps = 14/231 (6%)
Query: 298 REAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAV 357
++AE + M K GI+ D +++ S+ S Y+ K K + +MK K + P+ + A+
Sbjct: 308 KDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAI 367
Query: 358 IHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNI 417
+K + A+ + M++ V P+ T ++L+K L + KEV +++N+
Sbjct: 368 FSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNL 427
Query: 418 TPTIRTFHAFFRI------LRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDE 471
A + L+ E+F + ++ ++ ++ + + + +E
Sbjct: 428 ICDAYVATALVDMYGKSGDLQSAIEIFWGIKN-------KSLASWNCMLMGYAMFGRGEE 480
Query: 472 VFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQ-RKGFLP 521
+++M E G+ D ++ ++ +G V+E Y+ M+ R G +P
Sbjct: 481 GIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIP 531
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 311 GIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEA 370
G++ +V S++ YS++ KL ++F+ MK++ ++ +N+++ + K V +A
Sbjct: 119 GLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSS----WNSILSSYTKLGYVDDA 174
Query: 371 VNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRI 430
+ LL ME + PD+VT+NSL+ +A V M + P+ + + +
Sbjct: 175 IGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQA 234
Query: 431 ------LRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGV 484
L++ + + + + +L +ET LI + + L +++MM +
Sbjct: 235 VAEPGHLKLGKAIHGYILR-NQLWYDVYVET--TLIDMYIKTGYLPYARMVFDMMDAKNI 291
Query: 485 SHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQA 531
++ L+ GL +K+A I M+++G P+ T L +
Sbjct: 292 ----VAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLAS 334
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 123/280 (43%), Gaps = 52/280 (18%)
Query: 207 SLVTPQTLLIMIRKYCAVRDV--GRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQD 264
++VTP + +++ D+ GR ++ YA K GF + + ++S +Y ++ D
Sbjct: 304 AMVTPVAIGLILMGCARFGDLSGGRCVHC-YAVKA-GFILDLTVQNTIISFYAKYGSLCD 361
Query: 265 AEHLLFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVS------ 318
A + ++ S+N ++ G C + E+ R++HEM GI+ D+ +
Sbjct: 362 AFRQF---SEIGLKDVISYNSLITG-CVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLT 417
Query: 319 ----------------------YA-------SIMSCYSKSSKLYKVFQLFDQMKNKKITP 349
YA ++M Y+K KL ++FD M + I
Sbjct: 418 ACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVS 477
Query: 350 DRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVF 409
+N ++ L KEA++L +M++ V PD VT +++ + +DE K++F
Sbjct: 478 ----WNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLF 533
Query: 410 NDMMKR--NITPTIRTFHAFFRILRVE---EEVFELLDKM 444
N M + N+ P I ++ +L +E ++ ++KM
Sbjct: 534 NSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKM 573
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 14/190 (7%)
Query: 300 AERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIH 359
A+RV+ M KR D+VS+ +++ + + LF+ M+ + PD A++
Sbjct: 463 AKRVFDTMHKR----DIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILS 518
Query: 360 ALAKGRLVKEAVNLLQTMEKN--NVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNI 417
A + LV E L +M + NV P + YN + L + +DEA + N M
Sbjct: 519 ACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKM---PF 575
Query: 418 TPTIRTFHAFFRIL---RVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFK 474
P IR + E E+ KM+ LG T E+ ++L + + ++ +
Sbjct: 576 EPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLG--ETTESLVLLSNTYSAAERWEDAAR 633
Query: 475 IWNMMREDGV 484
I + ++ G+
Sbjct: 634 IRMIQKKRGL 643
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 112/263 (42%), Gaps = 37/263 (14%)
Query: 179 MISILGKMRKFDTAWNLIEVMRGGGTGPSL--VTPQTLLIMIRKYCAVRDVGRAINTFYA 236
++ + K K D AW L M P++ V T+ IM+ + + + AINTF
Sbjct: 363 LLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTF-- 420
Query: 237 FKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLEIKSFNIILNGWCNLIVS 296
K+ G +V F V D +L +CN I+ +C +
Sbjct: 421 -KKVGSKVTSKPF------------VMD--YLGYCN-------------IVTRFCEQGM- 451
Query: 297 AREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNA 356
EAER + E R + D S+ +++ Y K+ ++ ++ D+M + +
Sbjct: 452 LTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVADFGAR 511
Query: 357 VIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRN 416
V L K + E+ +L M + PD Y+ +++ LC +D+AK++ +M++ N
Sbjct: 512 VFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVGEMIRHN 571
Query: 417 --ITPTIRTF--HAFFRILRVEE 435
+T +R F F + R EE
Sbjct: 572 VGVTTVLREFIIEVFEKAGRREE 594
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 5/180 (2%)
Query: 355 NAVIHALAKGRLVKEAVNLLQTM-EKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMM 413
NA+I A+ + + E+++L Q +++N+ P+VV+YN +I C +DEA EV+ ++
Sbjct: 184 NAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHIL 243
Query: 414 KRN-ITPTIRTFHAFFRILRVEEEVFELLDKMREL---GCYPTIETYIMLIRKFCRWRKL 469
P+ T+ + L + + +RE+ G Y LIR +
Sbjct: 244 ANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDF 303
Query: 470 DEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQML 529
D+ + ++ ++ +D + F G KEA + Y + K F P T +L
Sbjct: 304 DKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVL 363
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 147/356 (41%), Gaps = 39/356 (10%)
Query: 177 HSMISILGKMRKFDTAWNLIEVMRGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTF-Y 235
H+ + L + D A L T P++ T ++ + Y A R +I+ F Y
Sbjct: 149 HNRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAM--YRAKR-YSESISLFQY 205
Query: 236 AFKRFGFQVGIDEFQGLLSALCRYKNVQDA----EHLLFCNKNVFPLEIKSFNIILNGWC 291
FK+ + + +++A C NV +A H+L N P + ++ + G
Sbjct: 206 FFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHIL-ANAPFAPSSV-TYRHLTKG-- 261
Query: 292 NLIVSAR--EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITP 349
L+ + R +A + EM +G D Y +++ Y K + FD++K+K
Sbjct: 262 -LVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCT-- 318
Query: 350 DRKVYNAVIHA------LAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKID 403
VY+ +++A KG KEA+ +++ T N L++ K K D
Sbjct: 319 ---VYDGIVNATFMEYWFEKGN-DKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKD 374
Query: 404 EAKEVFNDMMKRNITPTIRTFHAFFRILRVEE-----EVFELLDKMRELGCYPTIETYIM 458
EA +FN+M+ + P I + ++ + V E E E ++ +++G T + ++M
Sbjct: 375 EAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVM 434
Query: 459 -------LIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEA 507
++ +FC L E + + + D S+ +I ++ +A
Sbjct: 435 DYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDA 490
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 142/337 (42%), Gaps = 20/337 (5%)
Query: 154 EAAFTFFLWAGKQ-PGYAHSVREYHSMISIL---GKMRKFDTAWNLIEVMRGGGTGPSLV 209
+A + F WA Q G+ H + M S+L G +++ + L+E+ R G T +V
Sbjct: 127 QALWEIFRWASVQYQGFKHLPQACEIMASMLIREGMVKEVELL--LMEMERHGDT---MV 181
Query: 210 TPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLL 269
+I KY D +A+ F +R G +Q L+ L R + A +
Sbjct: 182 NEGIFCDLIGKYVDDFDSRKAVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRIC 241
Query: 270 F----CNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSC 325
+ + I S ++ C L +EA + ++ G + Y+ I
Sbjct: 242 LDWVETRAELNHMNIDSIGKVIELLC-LDQKVQEARVLARKLVALGCILNSSIYSKITIG 300
Query: 326 YSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPD 385
Y++ + ++K + PD V N ++H+L + + A ++ +E D
Sbjct: 301 YNEKQDFEDLLSFIGEVKYE---PDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQD 357
Query: 386 VVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRIL---RVEEEVFELLD 442
VT+ LI C I A +++M + P + +++A L + + +LD
Sbjct: 358 EVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILD 417
Query: 443 KMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMM 479
+M+E G ++ T+ +++ +C+ R+ +E +I N M
Sbjct: 418 EMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKM 454
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 134/331 (40%), Gaps = 43/331 (12%)
Query: 226 DVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCN--KNVFPLEIKSF 283
D+ A+ R+G ++ F L+ +LC + L K + L+ ++
Sbjct: 543 DLQTALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETL 602
Query: 284 NIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMK 343
N ++ +C S R ++ ++H+M + D V+Y S++ C+ K L + ++ +
Sbjct: 603 NFLVQEYCKKGFS-RHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQ 661
Query: 344 NKKITPDRKVYNAVIHALAKGRLVKEAVNLLQT----------------MEKNNVTPDVV 387
N PD + + L + LV+E V L + +EK V
Sbjct: 662 NDNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERVFISYPLSQSEACRIFVEKLTVLGFSC 721
Query: 388 TYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMREL 447
+S++K L I E +EV+N ++K T + + F +LD+M +
Sbjct: 722 IAHSVVKRLEGEGCIVE-QEVYNHLIKGLCTE------------KKDSAAFAILDEMLDK 768
Query: 448 GCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYI--VLIHGLFLNGKVK 505
P++ + +MLI + CR K F + + SSY+ LI GL L GK+
Sbjct: 769 KHIPSLGSCLMLIPRLCRANKAGTAFNLAEQI--------DSSYVHYALIKGLSLAGKML 820
Query: 506 EAHDYYIEMQRKGFLPEPKTEQ-MLQAWLSG 535
+A + M G K M Q + G
Sbjct: 821 DAENQLRIMLSNGLSSYNKIYNVMFQGYCKG 851
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 343 KNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKI 402
+N + P+ Y+ +I L+ + AV+LL TM KN P +Y+S+I L + ++
Sbjct: 1043 RNGMMAPN---YDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQL 1099
Query: 403 DEAKEVFNDMMKRNITPTIRTF----HAFFRILRVEEEVFELLDKMRELGCYPTIETYIM 458
D+A + +M++ ++P+I T+ H F +V E L+ M LG P+ E +
Sbjct: 1100 DKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESE-RLIKSMVGLGESPSQEMFKT 1158
Query: 459 LIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGL 498
+I +F + + ++ MM++ G D ++ LI +
Sbjct: 1159 VIDRFRVEKNTVKASEMMEMMQKCGYEVDFETHWSLISNM 1198
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 104/258 (40%), Gaps = 37/258 (14%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
E +V EM RG+ D ++ ++ YS S+ + M +K + P+ + AV
Sbjct: 927 EVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVT 986
Query: 359 HALAKGRLVKEAVNLLQTMEKN--NVTPDVV----------------------------- 387
+L VK+A++L Q ME N+ VV
Sbjct: 987 SSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGM 1046
Query: 388 ---TYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLD-- 442
Y+++IK L +D A + N M+K P ++ + L ++ + +D
Sbjct: 1047 MAPNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFH 1106
Query: 443 -KMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLN 501
+M ELG P+I T+ L+ KFC ++ E ++ M G S + + +I +
Sbjct: 1107 TEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVE 1166
Query: 502 GKVKEAHDYYIEMQRKGF 519
+A + MQ+ G+
Sbjct: 1167 KNTVKASEMMEMMQKCGY 1184
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 18/206 (8%)
Query: 328 KSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVV 387
+++K F L +Q+ + V+ A+I L+ + +A N L+ M N ++
Sbjct: 786 RANKAGTAFNLAEQIDSSY------VHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNK 839
Query: 388 TYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEV--------FE 439
YN + + CK + +EV M+++NI +++++ + R + +E + F
Sbjct: 840 IYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFL 899
Query: 440 LLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLF 499
LL + G + Y MLI R + EV K+ M+ GV D +++ L+HG
Sbjct: 900 LLGESNPGG----VIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYS 955
Query: 500 LNGKVKEAHDYYIEMQRKGFLPEPKT 525
+ + Y M KG P ++
Sbjct: 956 SSADYSSSLRYLSAMISKGMKPNNRS 981
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 127/302 (42%), Gaps = 48/302 (15%)
Query: 208 LVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEH 267
L+T TL+ + + D A+ F F+ GF F L++A + +
Sbjct: 279 LITWNTLISELER----SDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQ 334
Query: 268 L---LF---CNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYAS 321
L +F NKNV E+ + I + C I +++RV+ E+ R ++VS+ S
Sbjct: 335 LHGRIFRRGFNKNV---ELANALIDMYAKCGNI---PDSQRVFGEIVDR---RNLVSWTS 385
Query: 322 IMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKN- 380
+M Y + +LFD+M + I PDR V+ AV+ A LV++ + ME
Sbjct: 386 MMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEY 445
Query: 381 NVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEE----- 435
+ PD YN ++ L + KI EA E+ M P T+ A + +
Sbjct: 446 GINPDRDIYNCVVDLLGRAGKIGEAYELVERM---PFKPDESTWGAILGACKAHKHNGLI 502
Query: 436 ------EVFELLDKMRELGCYPTIETYIMLIRKFC---RWRKLDEVFKIWNMM---REDG 483
+V EL KM + TY+ML + +W V K+ MM +E G
Sbjct: 503 SRLAARKVMELKPKM--------VGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAG 554
Query: 484 VS 485
+S
Sbjct: 555 MS 556
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 123/319 (38%), Gaps = 46/319 (14%)
Query: 209 VTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHL 268
VTP + I +R ++ V + + GFQ + +L CR + +A+H
Sbjct: 211 VTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHY 270
Query: 269 LFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSK 328
+HEM + D++++ +++S +
Sbjct: 271 -----------------------------------FHEMEDK----DLITWNTLISELER 291
Query: 329 SSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVT 388
S + +F + +++ P+ + +++ A A + L + + +V
Sbjct: 292 SDS-SEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVEL 350
Query: 389 YNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELG 448
N+LI K I +++ VF +++ R + + + E EL DKM G
Sbjct: 351 ANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSG 410
Query: 449 CYPTIETYIMLIRKFCRWRKLDE-VFKIWNMMR-EDGVSHDRSSYIVLIHGLFLNGKVKE 506
P M + CR L E K +N+M E G++ DR Y ++ L GK+ E
Sbjct: 411 IRPD-RIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGE 469
Query: 507 AHDYYIEMQRKGFLPEPKT 525
A++ ++R F P+ T
Sbjct: 470 AYEL---VERMPFKPDEST 485
>AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11605156-11610651 FORWARD
LENGTH=843
Length = 843
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 87/191 (45%), Gaps = 1/191 (0%)
Query: 335 VFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIK 394
V +++ M NK + P+ + + I+ + + + A N+L ++ N+ P+ YNS++
Sbjct: 447 VQRIYSIMSNKSVKPNSETFRKSINLCIRIKDFEGAYNMLGNLKNFNLAPNSSMYNSIMA 506
Query: 395 PLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIE 454
+ +K++ A +V +M + ++ P TF E + + +M++ G
Sbjct: 507 GYFREKKVNSALKVLKEMKEADVKPDSVTFSYLINYCGEEATIAKYYKEMKQAGVEVNKH 566
Query: 455 TYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEM 514
Y+ L++ + + ++ ++ + H+ VLI L NG + EA Y EM
Sbjct: 567 VYMSLVKAYASCGQFEKAKQVLMDLEVPAKDHNELKS-VLISALASNGNITEALSIYEEM 625
Query: 515 QRKGFLPEPKT 525
++ EPK
Sbjct: 626 KKLRCPVEPKA 636
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 60/112 (53%)
Query: 305 HEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKG 364
+ M + GI V+ Y +++ Y S +L K ++F +M K P+ YN++I L
Sbjct: 713 NHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMA 772
Query: 365 RLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRN 416
+EA LL+ ME P+ V Y++L+ L K K+ EA++V +M+K+
Sbjct: 773 GEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 3/125 (2%)
Query: 362 AKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTI 421
KG A+ L M++ + P V+ Y +LI + ++D+AKE+F +M + P +
Sbjct: 700 GKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNV 759
Query: 422 RTFHAFFRILRVEEEVFE---LLDKMRELGCYPTIETYIMLIRKFCRWRKLDEVFKIWNM 478
T+++ R L + E E LL +M GC P Y L+ + KL E K+
Sbjct: 760 FTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKE 819
Query: 479 MREDG 483
M + G
Sbjct: 820 MVKKG 824
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 131/348 (37%), Gaps = 69/348 (19%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQM-KNKKITPDRKVYNAV 357
+A RV+ EM + DV+ + +++S +SK+ + LF M + K + PD + V
Sbjct: 216 DARRVFDEMP----EPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTV 271
Query: 358 IHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNI 417
+ A R +K+ + + N + +VV +SL+ K + EA++VFN M K+N
Sbjct: 272 LTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNS 331
Query: 418 TP---------------------------------TIRTFHAFFRILRVEEEVF------ 438
T+ A +R+ +E+
Sbjct: 332 VSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRR 391
Query: 439 ----------ELLDKMRELGCYPTIETYI--MLIRKFCRWRKL----------DEVFKIW 476
L+D + GC + M IR W + +E +
Sbjct: 392 GCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFF 451
Query: 477 NMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQM-LQAWLSG 535
N M + G+ D S+I ++ G V E +Y++ M K + +P TE L G
Sbjct: 452 NDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMA-KSYGIKPGTEHYSCMIDLLG 510
Query: 536 RQGTEGQVTD-LEHNQLEDDTVEKKVKATPSKFDKEKAFLREPETRRV 582
R G + + LE + +D V P + + + + E +R+
Sbjct: 511 RAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRM 558
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 124/301 (41%), Gaps = 24/301 (7%)
Query: 150 RND-WEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEVMRGGGTGPSL 208
+ND +E A F + G + ++++ G +R+ + + G G ++
Sbjct: 241 KNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNV 300
Query: 209 VTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEH- 267
V +LL M K +VR+ + N + LL C Q+ EH
Sbjct: 301 VVESSLLDMYGKCGSVREARQVFNGMSKKNSV-------SWSALLGGYC-----QNGEHE 348
Query: 268 -LLFCNKNVFPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCY 326
+ + + ++ F +L C + + R + + + +RG +V+ ++++ Y
Sbjct: 349 KAIEIFREMEEKDLYCFGTVLKA-CAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLY 407
Query: 327 SKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDV 386
KS + +++ +M + + +NA++ ALA+ +EAV+ M K + PD
Sbjct: 408 GKSGCIDSASRVYSKMSIRNMI----TWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDY 463
Query: 387 VTYNSLIKPLCKNRKIDEAKEVFNDMMKR-NITPTIRTFHAFFRIL---RVEEEVFELLD 442
+++ +++ +DE + F M K I P + +L + EE LL+
Sbjct: 464 ISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLE 523
Query: 443 K 443
+
Sbjct: 524 R 524
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 107/245 (43%), Gaps = 55/245 (22%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQM-KNKKITPDR------ 351
EA R++ E+ K D+V+++S++S + K+ Y+ + F +M +TPDR
Sbjct: 114 EALRMFDELEKP----DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITL 169
Query: 352 -----------------------------KVYNAVIHALAKGRLVKEAVNLLQTMEKNNV 382
+ N++++ AK R KEAVNL + + +
Sbjct: 170 VSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEK-- 227
Query: 383 TPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLD 442
DV++++++I +N EA VFNDMM P + T + ++ E
Sbjct: 228 --DVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDL-EQGR 284
Query: 443 KMRELGCYPTIETYI----MLIRKFCRWRKLDEVFKIWNMM-REDGVSHDRSSYIVLIHG 497
K EL +ET + L+ + + +E + +++ + R+D V S++ LI G
Sbjct: 285 KTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVV-----SWVALISG 339
Query: 498 LFLNG 502
LNG
Sbjct: 340 FTLNG 344
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
Query: 286 ILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNK 345
+L+G C + +EA +++ M +G +VV Y +++ + K+ K+ ++F +M+N
Sbjct: 137 MLDGLCKDGL-VQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 346 KITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEA 405
I P+ Y ++ L ++ +AV M ++ +P+V T+ L+ LC+ + +++A
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQA 255
Query: 406 KEVFNDMMKRNITPTIRTFHAFF 428
+ + + ++ ++ F
Sbjct: 256 QSAIDTLNQKGFAVNVKAVKEFM 278
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 72/141 (51%), Gaps = 7/141 (4%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
+++ ++ +M + G+ + V+ ++ K + + +LF M++K P+ +Y AV+
Sbjct: 117 DSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVV 173
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
A K +++A + + M+ N + P+ +Y L++ L +D+A ++M++ +
Sbjct: 174 EAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHS 233
Query: 419 PTIRTF----HAFFRILRVEE 435
P + TF A R+ VE+
Sbjct: 234 PNVPTFVELVDALCRVKGVEQ 254
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 78/177 (44%), Gaps = 14/177 (7%)
Query: 403 DEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRK 462
+++ E+F M + + P + +E +L MR+ G P + Y ++
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEA 175
Query: 463 FCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
FC+ K+++ +I+ M+ +G++ + SY VL+ GL+ + +A + EM G P
Sbjct: 176 FCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPN 235
Query: 523 -PKTEQMLQAWLSGRQGTEGQVTDLEHNQLEDDTVEKK-----VKATPSKFDKEKAF 573
P +++ A +V +E Q DT+ +K VKA DK F
Sbjct: 236 VPTFVELVDALC--------RVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMDKRAPF 284
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
Query: 286 ILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNK 345
+L+G C + +EA +++ M +G +VV Y +++ + K+ K+ ++F +M+N
Sbjct: 137 MLDGLCKDGL-VQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 346 KITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEA 405
I P+ Y ++ L ++ +AV M ++ +P+V T+ L+ LC+ + +++A
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQA 255
Query: 406 KEVFNDMMKRNITPTIRTFHAFF 428
+ + + ++ ++ F
Sbjct: 256 QSAIDTLNQKGFAVNVKAVKEFM 278
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 72/141 (51%), Gaps = 7/141 (4%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
+++ ++ +M + G+ + V+ ++ K + + +LF M++K P+ +Y AV+
Sbjct: 117 DSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVV 173
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
A K +++A + + M+ N + P+ +Y L++ L +D+A ++M++ +
Sbjct: 174 EAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHS 233
Query: 419 PTIRTF----HAFFRILRVEE 435
P + TF A R+ VE+
Sbjct: 234 PNVPTFVELVDALCRVKGVEQ 254
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 78/177 (44%), Gaps = 14/177 (7%)
Query: 403 DEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRK 462
+++ E+F M + + P + +E +L MR+ G P + Y ++
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEA 175
Query: 463 FCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPE 522
FC+ K+++ +I+ M+ +G++ + SY VL+ GL+ + +A + EM G P
Sbjct: 176 FCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPN 235
Query: 523 -PKTEQMLQAWLSGRQGTEGQVTDLEHNQLEDDTVEKK-----VKATPSKFDKEKAF 573
P +++ A +V +E Q DT+ +K VKA DK F
Sbjct: 236 VPTFVELVDALC--------RVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMDKRAPF 284
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 114/264 (43%), Gaps = 29/264 (10%)
Query: 177 HSMISILGKMRKFDTAWNLIEVM--RGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTF 234
+S++ RK D AWN+I M R T SLVT L +V IN
Sbjct: 466 NSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSV------INYM 519
Query: 235 YAFKRFGFQVGIDEFQ--GLLSALCRYKNVQDAEHL-LFCNKNVFPLEIKSFNIILNGW- 290
Y G + +D+ G +SA ++ +HL + K+ F N +++ +
Sbjct: 520 Y-----GDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYS 574
Query: 291 -CNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITP 349
C S +A++V+ E++ DVVS+ ++S + + + F++M+ K+ P
Sbjct: 575 KCG---SLEDAKKVFEEIATP----DVVSWNGLVSGLASNGFISSALSAFEEMRMKETEP 627
Query: 350 DRKVYNAVIHALAKGRLVKEAVNLLQTMEK-NNVTPDVVTYNSLIKPLCKNRKIDEAKEV 408
D + ++ A + GRL + Q M+K N+ P V Y L+ L + +++EA V
Sbjct: 628 DSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGV 687
Query: 409 FNDMMKRNITPTIRTFHAFFRILR 432
M ++ P F R R
Sbjct: 688 VETM---HLKPNAMIFKTLLRACR 708
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 140/354 (39%), Gaps = 52/354 (14%)
Query: 230 AINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNV-FPLEIKSFNIILN 288
A+ TF + G Q + +LS +++ + + V F N +++
Sbjct: 309 AVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVD 368
Query: 289 GWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKIT 348
+ S EA RV+ M + +VVS+ +++ + F L +M +++
Sbjct: 369 MYMKCSASEVEASRVFGAM----VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVE 424
Query: 349 PDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEV 408
P+ + V+ A +K R V+ + + + + +V ++V NSL+ +RK+D A V
Sbjct: 425 PNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNV 484
Query: 409 FNDMMKR-NITPTIRTFHAFFRILRVEEEVFELLDKM----------------------- 444
M +R NIT T + F L E +++ M
Sbjct: 485 IRSMKRRDNITYT--SLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLG 542
Query: 445 -----RELGCYPTIETYI-------MLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYI 492
+ L CY + L+ + + L++ K++ E+ + D S+
Sbjct: 543 ALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVF----EEIATPDVVSWN 598
Query: 493 VLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQAWLSGRQGTEGQVTDL 546
L+ GL NG + A + EM+ K P+ T +L + S G++TDL
Sbjct: 599 GLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACS-----NGRLTDL 647
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 100/224 (44%), Gaps = 25/224 (11%)
Query: 309 KRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAK-GRLV 367
K G++ D+V S ++ YS+S ++FD+M K D +N+++ L++ G
Sbjct: 202 KTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFK----DMISWNSLLSGLSQEGTFG 257
Query: 368 KEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAF 427
EAV + + M + V D V++ S+I C + A+++ +KR + +
Sbjct: 258 FEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRG-------YESL 310
Query: 428 FRILRVEEEVFELLDKMRELGCYPTIETYI--MLIRKFCRWRKL-----DEVFKIWNMMR 480
+ + L+ + + G +++ M R W + D+ I+ MR
Sbjct: 311 LEVGNI------LMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDDAVSIFLNMR 364
Query: 481 EDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPK 524
DGV + +++ LI+ + N ++KE + + GF+ EP
Sbjct: 365 FDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPS 408
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 142/311 (45%), Gaps = 34/311 (10%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
+A++ + +++ R +++S+ +++S ++++ ++ ++F + + P+ + +V+
Sbjct: 425 DAKKAFEDITFR----EIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVL 479
Query: 359 HALAKGR--LVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRN 416
+A+A VK+ + K + V ++L+ K IDE+++VFN+M ++N
Sbjct: 480 NAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKN 539
Query: 417 I---TPTIRTF--HAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLDE 471
T I + H F E V L KM + P + T++ ++ R +D+
Sbjct: 540 QFVWTSIISAYSSHGDF------ETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDK 593
Query: 472 VFKIWNMMRED-GVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKTEQMLQ 530
++I+NMM E + Y ++ L G++KEA + E +P E MLQ
Sbjct: 594 GYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSE------VPGGPGESMLQ 647
Query: 531 AWLS-----GRQGTEGQVTDLEHN---QLEDDTVEK-KVKATPSKFDKEKAFLREPETRR 581
+ L G +V +L +L V+ + A ++DK + +
Sbjct: 648 SMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKN 707
Query: 582 VTRDRGFSFWD 592
V+++ GFS+ D
Sbjct: 708 VSKEAGFSWID 718
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 84/172 (48%), Gaps = 6/172 (3%)
Query: 295 VSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVY 354
+S ++ +R + K G+ V ++++ Y+K + + ++F++M K ++ V+
Sbjct: 488 ISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQK----NQFVW 543
Query: 355 NAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMK 414
++I A + + +NL M K NV PD+VT+ S++ + +D+ E+FN M++
Sbjct: 544 TSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIE 603
Query: 415 -RNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCR 465
N+ P+ + +L + E + M E+ P E+ + + CR
Sbjct: 604 VYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPG-ESMLQSMLGSCR 654
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 121/282 (42%), Gaps = 16/282 (5%)
Query: 193 WNLIEVM-RGGGTGPSLVTPQTLLIMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQG 251
+NL+ ++ R + P+ QT+L I + C+ GR G ++G +
Sbjct: 2 FNLMRLIHRSFSSSPTNYVLQTILP-ISQLCSN---GRLQEALLEMAMLGPEMGFHGYDA 57
Query: 252 LLSALCRYKNVQDAE--HLLFCNKNVFPLE-IKSFNIILNGWCNLIVSAREAERVWHEMS 308
LL+A + ++D + H P +++ +I G C+ + AR +V EM
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDAR---KVLDEMP 114
Query: 309 KRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVK 368
++ +VVS+ +++S YS++ + +F +M P+ + V+ + + +
Sbjct: 115 EK----NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLG 170
Query: 369 EAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFF 428
+ + K N + +SL+ K +I EA+E+F + +R++ +
Sbjct: 171 LGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYA 230
Query: 429 RILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKLD 470
+ L ++EE E+ ++ G P TY L+ LD
Sbjct: 231 Q-LGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLD 271
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 130/313 (41%), Gaps = 32/313 (10%)
Query: 230 AINTFYAFKRFGFQVGIDEFQGLL---SALCRYKNVQDAEHLLFCNKNVFPLEIKSFNII 286
+ F KR GF+ F G + + L Y N Q L K F + + N +
Sbjct: 401 GLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLL--KIGFDSSLSAGNAL 458
Query: 287 LNGW--CNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKN 344
+ + C ++ AR+ R + D VS+ ++++ + + ++++M
Sbjct: 459 ITMYAKCGVVEEARQVFRTMPCL-------DSVSWNALIAALGQHGHGAEAVDVYEEMLK 511
Query: 345 KKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEK-NNVTPDVVTYNSLIKPLCKNRKID 403
K I PDR V+ A + LV + +ME + P Y LI LC++ K
Sbjct: 512 KGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFS 571
Query: 404 EAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEV-FELLDKMRELGCYPTIE-TYIMLIR 461
+A+ V + PT + A RV + ++ + G P + TY++L
Sbjct: 572 DAESVIESL---PFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSN 628
Query: 462 KFCRWRKLDEVFKIWNMMREDGVSHDRS-SYIVL---IHGLFLNGKVK-EAHDYYI---- 512
+ +EV ++ +MR+ GV + + S+I + +H ++ EA YI
Sbjct: 629 MHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQD 688
Query: 513 ---EMQRKGFLPE 522
EM+R G++P+
Sbjct: 689 LGKEMRRLGYVPD 701
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 7/182 (3%)
Query: 306 EMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGR 365
E+ G Q D V + ++S Y + LFDQM+ + P + A++ A
Sbjct: 589 ELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAG 648
Query: 366 LVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFH 425
LV++ L M + +V P++ Y+ L+ L ++ ++EA+ +M +P +
Sbjct: 649 LVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAEST---VMSMPFSPDGVIWG 705
Query: 426 AFFRILRVEEEVFELLDKMRELGCYPTIET---YIMLIRKFCRWRKLDEVFKIWNMMRED 482
E FE+ +M E + YIML + K +E + MMRE
Sbjct: 706 TLLSSCMTHGE-FEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRES 764
Query: 483 GV 484
GV
Sbjct: 765 GV 766
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 132/305 (43%), Gaps = 33/305 (10%)
Query: 216 IMIRKYCAVRDVGRAINTFYAFKRFGFQVGIDEFQGLLSALCRYKNVQDAEHLLFCNKNV 275
+MI+ Y R++G+A F + + + +LS + V DA ++V
Sbjct: 131 VMIKGYVRNRNLGKARELFEIMP----ERDVCSWNTMLSGYAQNGCVDDA-------RSV 179
Query: 276 FPLEIKSFNIILNGWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKV 335
F + ++ N + V + E R +VS+ ++ + K K+ +
Sbjct: 180 FDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRE-NWALVSWNCLLGGFVKKKKIVEA 238
Query: 336 FQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKP 395
Q FD M + + +N +I A+ + EA L + DV T+ +++
Sbjct: 239 RQFFDSMNVRDVVS----WNTIITGYAQSGKIDEARQLFD----ESPVQDVFTWTAMVSG 290
Query: 396 LCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVE--EEVFELLDKMRELGCYPTI 453
+NR ++EA+E+F+ M +RN + + R+E +E+F+++ C +
Sbjct: 291 YIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMP------C-RNV 343
Query: 454 ETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIE 513
T+ +I + + K+ E +++ M + D S+ +I G +G EA +++
Sbjct: 344 STWNTMITGYAQCGKISEAKNLFDKMPK----RDPVSWAAMIAGYSQSGHSFEALRLFVQ 399
Query: 514 MQRKG 518
M+R+G
Sbjct: 400 MEREG 404
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 110/240 (45%), Gaps = 12/240 (5%)
Query: 274 NVFPL-EIKSFNIILNGW--CNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSS 330
+V P + ++N ++ G+ C I EA+ ++ +M KR D VS+A++++ YS+S
Sbjct: 336 DVMPCRNVSTWNTMITGYAQCGKI---SEAKNLFDKMPKR----DPVSWAAMIAGYSQSG 388
Query: 331 KLYKVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYN 390
++ +LF QM+ + +R +++ + A ++ L + K N
Sbjct: 389 HSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGN 448
Query: 391 SLIKPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCY 450
+L+ CK I+EA ++F +M ++I + T A + E + M+ G
Sbjct: 449 ALLLMYCKCGSIEEANDLFKEMAGKDIV-SWNTMIAGYSRHGFGEVALRFFESMKREGLK 507
Query: 451 PTIETYIMLIRKFCRWRKLDEVFKIWNMMRED-GVSHDRSSYIVLIHGLFLNGKVKEAHD 509
P T + ++ +D+ + + M +D GV + Y ++ L G +++AH+
Sbjct: 508 PDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHN 567
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 128/300 (42%), Gaps = 44/300 (14%)
Query: 231 INTFYAFKRFGFQVGIDEFQGL------LSALCRYKNVQDAEHLLFCNKNVFPL------ 278
IN F A R Q+ GL + +++ A PL
Sbjct: 3 INKFRALSRRAQQLHYTSLNGLKRRCNNAHGAANFHSLKRATQTQIQKSQTKPLLKCGDS 62
Query: 279 EIKSFNIILN-----GWCNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLY 333
+IK +N+ ++ G CN EA RV+ M + VSY ++S Y ++ +
Sbjct: 63 DIKEWNVAISSYMRTGRCN------EALRVFKRMPR----WSSVSYNGMISGYLRNGEFE 112
Query: 334 KVFQLFDQMKNKKITPDRKVYNAVIHALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLI 393
+LFD+M + + +N +I + R + +A L + M + DV ++N+++
Sbjct: 113 LARKLFDEMPERDLVS----WNVMIKGYVRNRNLGKARELFEIMPER----DVCSWNTML 164
Query: 394 KPLCKNRKIDEAKEVFNDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTI 453
+N +D+A+ VF+ M ++N A+ + ++EE +L K RE +
Sbjct: 165 SGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEAC--MLFKSRE---NWAL 219
Query: 454 ETYIMLIRKFCRWRKLDEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIE 513
++ L+ F + +K+ E + ++ M D S+ +I G +GK+ EA + E
Sbjct: 220 VSWNCLLGGFVKKKKIVEARQFFDSMN----VRDVVSWNTIITGYAQSGKIDEARQLFDE 275
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 103/232 (44%), Gaps = 15/232 (6%)
Query: 299 EAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPDRKVYNAVI 358
+A +V+ MS + DVV+ ++++ Y++ L +V ++ +M++ I + +N ++
Sbjct: 169 DARKVFDRMSDK----DVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGIL 224
Query: 359 HALAKGRLVKEAVNLLQTMEKNNVTPDVVTYNSLIKPLCKNRKIDEAKEVFNDMMKRNIT 418
+ KEAV + Q + PD VT +S++ + + ++ + + ++K+ +
Sbjct: 225 SGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLL 284
Query: 419 PTIRTFHAFFRILRVEEEVFELLD-----KMRELGCYPTIETYIMLIRKFCRWRKLDEVF 473
A + V+ ++ +M E G Y I R +D+
Sbjct: 285 KDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAG---VCNAY---ITGLSRNGLVDKAL 338
Query: 474 KIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT 525
+++ + +E + + S+ +I G NGK EA + + EMQ G P T
Sbjct: 339 EMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVT 390
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 108/236 (45%), Gaps = 10/236 (4%)
Query: 291 CNLIVSAREAERVWHEMSKRGIQHDVVSYASIMSCYSKSSKLYKVFQLFDQMKNKKITPD 350
C ++ AR +V+ EM KR I VV I +C +++ + F +M + D
Sbjct: 64 CGKVLDAR---KVFDEMPKRDISGCVVM---IGAC-ARNGYYQESLDFFREMYKDGLKLD 116
Query: 351 RKVYNAVIHALAKGRLVKEAVNLLQTME-KNNVTPDVVTYNSLIKPLCKNRKIDEAKEVF 409
+ +++ A ++ L +E ++ + K + D +SLI K ++ A++VF
Sbjct: 117 AFIVPSLLKA-SRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVF 175
Query: 410 NDMMKRNITPTIRTFHAFFRILRVEEEVFELLDKMRELGCYPTIETYIMLIRKFCRWRKL 469
+D+ ++++ + + +E L+ M+ LG P + T+ LI F R
Sbjct: 176 SDLGEQDLVVFNAMISGYANNSQA-DEALNLVKDMKLLGIKPDVITWNALISGFSHMRNE 234
Query: 470 DEVFKIWNMMREDGVSHDRSSYIVLIHGLFLNGKVKEAHDYYIEMQRKGFLPEPKT 525
++V +I +M DG D S+ +I GL N + ++A D + +M G P T
Sbjct: 235 EKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSAT 290