Miyakogusa Predicted Gene
- Lj0g3v0159629.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0159629.1 Non Chatacterized Hit- tr|K4DAB7|K4DAB7_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,28.4,3e-16,seg,NULL; coiled-coil,NULL,CUFF.10383.1
(1300 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G08060.2 | Symbols: MOM, MOM1 | ATP-dependent helicase family... 71 6e-12
AT1G08060.1 | Symbols: MOM, MOM1 | ATP-dependent helicase family... 71 6e-12
>AT1G08060.2 | Symbols: MOM, MOM1 | ATP-dependent helicase family
protein | chr1:2501981-2510488 REVERSE LENGTH=2001
Length = 2001
Score = 70.9 bits (172), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 100/253 (39%), Gaps = 39/253 (15%)
Query: 1 MVENCLEYTMNNHQICMEPVSILQAFQLSLCWTVSSLLNHKLDFEASLELAKQHLNFDCD 60
MV N LEY + NH+I EP + QAFQ++L W + L+ L + SL A L F C
Sbjct: 977 MVGNFLEYVIENHRIYEEPATTFQAFQIALSWIAALLVKQILSHKESLVRANSELAFKCS 1036
Query: 61 KGVVDEIHSMLCKLKKNFL---------------------------SLTG----NPKVTG 89
+ VD I+S+L +K FL SL+G + K+
Sbjct: 1037 RVEVDYIYSILSCMKSLFLEHTQGLQFDCFGTNSKQSVVSTKLVNESLSGATVRDEKINT 1096
Query: 90 XXXXXXXXXXXXXXXXTVVEF--AKRDISXXXXXXXXXXQWVKLLLMQEKDKRKLENDIK 147
+ A RDI + L+QE +++K+E +
Sbjct: 1097 KSMRNSSEDEECMTEKRCSHYSTATRDIEKTISGIKKKYKKQVQKLVQEHEEKKME--LL 1154
Query: 148 NEEADFQRRCK----IEWTTIKSFSPNDVIRKEKLKVYRSSYEKTLGELRRQHQTRLQDL 203
N AD +++ + +E I+ + LK+ +YE+ E++ + L+ L
Sbjct: 1155 NMYADKKQKLETSKSVEAAVIRITCSRTSTQVGDLKLLDHNYERKFDEIKSEKNECLKSL 1214
Query: 204 EAQQSEAIRKFQE 216
E A +K E
Sbjct: 1215 EQMHDVAKKKLAE 1227
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 117/277 (42%), Gaps = 46/277 (16%)
Query: 897 ATQSASRVFPPLCHDPLYNELDRIRKLTEQTSKVCKDMKLQNECNYMKELVELQRKYEVK 956
A Q ++ P+ +DP +EL+++R+ +E + K ++ K + +++ E+Q ++ K
Sbjct: 1720 AVQPVPQIPFPVFNDPFLHELEKLRRESENSKKTFEEKKSILKAELERKMAEVQAEFRRK 1779
Query: 957 FREIEDEFQRTKKDLDTQLNTVYVHRLLAQTFKATSVDHKDWGASGMQQDASFGQQLPQL 1016
F E+E E ++ N V +++LLA F + D K SG + QQL Q
Sbjct: 1780 FHEVEAEHNTRTTKIEKDKNLVIMNKLLANAFLSKCTDKK-VSPSGAPRGKI--QQLAQR 1836
Query: 1017 SRQQPASLPYMVAPP---SSCGPSAAIFP-------SSHATPGSQTMLPPTLAAYSTAGV 1066
+ Q A Y +AP +S P+ A+ SS PG + P A
Sbjct: 1837 AAQVSALRNY-IAPQQLQASSFPAPALVSAPLQLQQSSFPAPGPAPLQP-------QASS 1888
Query: 1067 FSGVSARXXXXXXXXXXXXXXXQAGGQIRAPAPHLQPFRPSASVPAPTPPHLQPFRPSTP 1126
F +R A P QP +P S APTP P+T
Sbjct: 1889 FPSSVSRPSALLLNF--------------AVCPMPQPRQPLISNIAPTPS----VTPATN 1930
Query: 1127 VPPRAPS-HLQRFRPSTSFPTPAAPHLQSSRPSTSVP 1162
R+P+ HL +RPS+S P A P++SVP
Sbjct: 1931 PGLRSPAPHLNSYRPSSSTPVATA------TPTSSVP 1961
>AT1G08060.1 | Symbols: MOM, MOM1 | ATP-dependent helicase family
protein | chr1:2501981-2510488 REVERSE LENGTH=2001
Length = 2001
Score = 70.9 bits (172), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 100/253 (39%), Gaps = 39/253 (15%)
Query: 1 MVENCLEYTMNNHQICMEPVSILQAFQLSLCWTVSSLLNHKLDFEASLELAKQHLNFDCD 60
MV N LEY + NH+I EP + QAFQ++L W + L+ L + SL A L F C
Sbjct: 977 MVGNFLEYVIENHRIYEEPATTFQAFQIALSWIAALLVKQILSHKESLVRANSELAFKCS 1036
Query: 61 KGVVDEIHSMLCKLKKNFL---------------------------SLTG----NPKVTG 89
+ VD I+S+L +K FL SL+G + K+
Sbjct: 1037 RVEVDYIYSILSCMKSLFLEHTQGLQFDCFGTNSKQSVVSTKLVNESLSGATVRDEKINT 1096
Query: 90 XXXXXXXXXXXXXXXXTVVEF--AKRDISXXXXXXXXXXQWVKLLLMQEKDKRKLENDIK 147
+ A RDI + L+QE +++K+E +
Sbjct: 1097 KSMRNSSEDEECMTEKRCSHYSTATRDIEKTISGIKKKYKKQVQKLVQEHEEKKME--LL 1154
Query: 148 NEEADFQRRCK----IEWTTIKSFSPNDVIRKEKLKVYRSSYEKTLGELRRQHQTRLQDL 203
N AD +++ + +E I+ + LK+ +YE+ E++ + L+ L
Sbjct: 1155 NMYADKKQKLETSKSVEAAVIRITCSRTSTQVGDLKLLDHNYERKFDEIKSEKNECLKSL 1214
Query: 204 EAQQSEAIRKFQE 216
E A +K E
Sbjct: 1215 EQMHDVAKKKLAE 1227
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 117/277 (42%), Gaps = 46/277 (16%)
Query: 897 ATQSASRVFPPLCHDPLYNELDRIRKLTEQTSKVCKDMKLQNECNYMKELVELQRKYEVK 956
A Q ++ P+ +DP +EL+++R+ +E + K ++ K + +++ E+Q ++ K
Sbjct: 1720 AVQPVPQIPFPVFNDPFLHELEKLRRESENSKKTFEEKKSILKAELERKMAEVQAEFRRK 1779
Query: 957 FREIEDEFQRTKKDLDTQLNTVYVHRLLAQTFKATSVDHKDWGASGMQQDASFGQQLPQL 1016
F E+E E ++ N V +++LLA F + D K SG + QQL Q
Sbjct: 1780 FHEVEAEHNTRTTKIEKDKNLVIMNKLLANAFLSKCTDKK-VSPSGAPRGKI--QQLAQR 1836
Query: 1017 SRQQPASLPYMVAPP---SSCGPSAAIFP-------SSHATPGSQTMLPPTLAAYSTAGV 1066
+ Q A Y +AP +S P+ A+ SS PG + P A
Sbjct: 1837 AAQVSALRNY-IAPQQLQASSFPAPALVSAPLQLQQSSFPAPGPAPLQP-------QASS 1888
Query: 1067 FSGVSARXXXXXXXXXXXXXXXQAGGQIRAPAPHLQPFRPSASVPAPTPPHLQPFRPSTP 1126
F +R A P QP +P S APTP P+T
Sbjct: 1889 FPSSVSRPSALLLNF--------------AVCPMPQPRQPLISNIAPTPS----VTPATN 1930
Query: 1127 VPPRAPS-HLQRFRPSTSFPTPAAPHLQSSRPSTSVP 1162
R+P+ HL +RPS+S P A P++SVP
Sbjct: 1931 PGLRSPAPHLNSYRPSSSTPVATA------TPTSSVP 1961