Miyakogusa Predicted Gene

Lj0g3v0159429.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0159429.1 Non Chatacterized Hit- tr|K4BMP2|K4BMP2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,47.15,5e-19,seg,NULL; DUF761,Protein of unknown function
DUF761, plant,CUFF.9879.1
         (209 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G52140.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   126   9e-30
AT4G29110.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   110   8e-25
AT3G16330.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   101   3e-22

>AT1G52140.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins
           in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0;
           Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes -
           0 (source: NCBI BLink). | chr1:19407559-19408185 REVERSE
           LENGTH=208
          Length = 208

 Score =  126 bits (317), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 117/209 (55%), Gaps = 34/209 (16%)

Query: 10  VAKKLWNMVRVLFFMLRKGIAKSRVMVDFHHLMLKRGKLAGKAIANTLMFH-----HQYA 64
           ++KKLWN+VR L +M+RKG++K++++ DF+   LKRGK         LMFH     H  +
Sbjct: 7   ISKKLWNIVRFLLYMIRKGVSKNKLIADFN-ATLKRGK--------NLMFHQRRRVHAGS 57

Query: 65  ALTCRSHNTHLSVFSPREYEFSCSKSPVFQ-PTKXXXXXXXXXYSK-------PSSQYDD 116
             +   + T  +  S +EYEFSCS +P +  P           ++        P +  DD
Sbjct: 58  TASAALNATSATASSRQEYEFSCSNTPNYSFPFSNMAFMRKKSHNNLFTCGQTPQTLDDD 117

Query: 117 FSTYSAVQKVLEMLNN--DKVEVDSSSPLVTL----PGFGKSPVCRQLRVTDSPFPLKDE 170
            +   A + VLE+LN   +K  V  +   V L    PGFG++P+ R LRVTDSPFPL  E
Sbjct: 118 VA---AARAVLELLNGVGEKGNVTPADLTVALSPYFPGFGQTPLVRPLRVTDSPFPLTPE 174

Query: 171 SGD---SQVDMEAEEFIKRFYKDLNLQKR 196
           +GD     VD  A++FIK+FYK+LN QK+
Sbjct: 175 NGDVANGHVDKAADDFIKKFYKNLNQQKK 203


>AT4G29110.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN: response to
           chitin; LOCATED IN: vacuole; BEST Arabidopsis thaliana
           protein match is: unknown protein (TAIR:AT1G52140.1);
           Has 109 Blast hits to 109 proteins in 16 species: Archae
           - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109;
           Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
           | chr4:14348866-14349468 FORWARD LENGTH=200
          Length = 200

 Score =  110 bits (274), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/217 (39%), Positives = 114/217 (52%), Gaps = 38/217 (17%)

Query: 1   MEIEGSQPVVAKKLWNMVRVLFFMLRKGIAKSRVMVDFHHLMLKRGKLAGKAIANTLMFH 60
           ME+E +  V AK+LW +VR++F +L+ G  K+++M+D + LMLKRG    KAI N     
Sbjct: 12  MEMEQNAQVAAKRLWKVVRIVFCVLKTGTVKNKLMLDLN-LMLKRG---NKAITN----- 62

Query: 61  HQYAALTCRSHNTHLSVFSPREYEFSCSKSPVFQPTKXXXXXXXXXYSKPSSQYDDFSTY 120
                L  RS +T     S      S S+   + P           +    ++ D  +  
Sbjct: 63  -----LRRRSSSTGSHDVS------SSSRVRDYDPFAFISKRKRRVHGGYDNEED--AVE 109

Query: 121 SAVQKVLEMLN-NDK----VEVDSSSPLVTLPGFGKSPVCRQLRVTDSPFPLKDESGDSQ 175
           +AV+KV E+L  NDK     E    SPL+       SP  RQLRVTDSPFPL D+ GD  
Sbjct: 110 AAVKKVFELLGENDKKTVATESARESPLIM------SPAVRQLRVTDSPFPL-DDGGDHD 162

Query: 176 --VDMEAEEFIKRFYKDLNLQKRSMASFESP--SSWV 208
             VD  AEEFIK+FYK+L LQK+   + ESP    WV
Sbjct: 163 HVVDKAAEEFIKKFYKNLKLQKKMTNALESPYHDGWV 199


>AT3G16330.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT1G52140.1); Has 109 Blast hits to 109 proteins
           in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0;
           Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes -
           0 (source: NCBI BLink). | chr3:5535263-5535880 FORWARD
           LENGTH=205
          Length = 205

 Score =  101 bits (252), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 109/213 (51%), Gaps = 39/213 (18%)

Query: 10  VAKKLWNMVRVLFFMLRKGIAKSRVMVDFHHLMLKRGKLAGKAIANTLMFHHQYAALTCR 69
           ++KKL N+VR + +ML KGI+K +++ DF +  LKRGK         LMFH++      R
Sbjct: 7   ISKKLGNIVRFVLYMLHKGISKQKLLADF-NATLKRGK--------NLMFHNRR-----R 52

Query: 70  SHNTHLSVFSPREYEFSCSKSPVFQ--------PTKXXXXXXXXXYSKPSSQYDDFSTYS 121
              + ++     EYEFSCS +P +           K            P +  DD S   
Sbjct: 53  VPGSAVASHPQNEYEFSCSDTPNYTFPFNMAAFKKKSHHNSLFSCGQAPPTLDDDTSVSR 112

Query: 122 AVQKVLEMLN-NDKVEVDSSSPLVT----------LPGFGKSP-VCRQLRVTDSPFPLKD 169
           A   VLE+LN     +  S++P  +          LPGFG+S    R LRVTDSPFPL++
Sbjct: 113 A---VLELLNSGGDHDQGSNTPAFSIEALTALSPYLPGFGRSTSSVRPLRVTDSPFPLRE 169

Query: 170 ES--GDSQVDMEAEEFIKRFYKDLNLQKRSMAS 200
           E    +  VD  A+EFIK+FYK+L  QK+ + S
Sbjct: 170 EGDVANGHVDKAADEFIKKFYKNLYQQKKMIES 202