Miyakogusa Predicted Gene

Lj0g3v0159409.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0159409.1 Non Chatacterized Hit- tr|I1N0E2|I1N0E2_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,45.93,2e-19,L
domain-like,NULL; no description,NULL,CUFF.9877.1
         (159 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G07040.1 | Symbols: RPM1, RPS3 | NB-ARC domain-containing dis...    63   9e-11
AT5G43470.2 | Symbols: RPP8, HRT, RCY1 | Disease resistance prot...    47   5e-06
AT5G43470.1 | Symbols: RPP8, HRT, RCY1 | Disease resistance prot...    47   5e-06
AT5G35450.1 | Symbols:  | Disease resistance protein (CC-NBS-LRR...    46   9e-06

>AT3G07040.1 | Symbols: RPM1, RPS3 | NB-ARC domain-containing
           disease resistance protein | chr3:2226244-2229024
           REVERSE LENGTH=926
          Length = 926

 Score = 62.8 bits (151), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 17  VGKIKKLLDWVPMLQNLERLCLEFCNLTDDPFKSLQNMPNLLYFRLTGDFNEGEMVQFQE 76
            GK++++  W   LQNL  L L    L ++   S+Q +P L++      +  G  ++F +
Sbjct: 765 AGKLERVPSWFNTLQNLTYLGLRGSQLQENAILSIQTLPRLVWLSFYNAYM-GPRLRFAQ 823

Query: 77  GGFQKLKELNLAVLHKCSSIVIHRGALRSLKILGLSSIPNLRVVPSGIQNLENLEVLEIS 136
           G FQ LK L +  +   + +VI  GA+  L+ L + +   L  VP GI+NL NL+ L + 
Sbjct: 824 G-FQNLKILEIVQMKHLTEVVIEDGAMFELQKLYVRACRGLEYVPRGIENLINLQELHLI 882

Query: 137 YMSKKFNKSI 146
           ++S +  + I
Sbjct: 883 HVSNQLVERI 892


>AT5G43470.2 | Symbols: RPP8, HRT, RCY1 | Disease resistance protein
           (CC-NBS-LRR class) family | chr5:17463130-17466658
           REVERSE LENGTH=908
          Length = 908

 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/117 (23%), Positives = 60/117 (51%)

Query: 32  NLERLCLEFCNLTDDPFKSLQNMPNLLYFRLTGDFNEGEMVQFQEGGFQKLKELNLAVLH 91
           +L  L L +C + +DP   L+ + +L   RL      G  +   +GGF +L  + ++   
Sbjct: 771 HLVHLFLIYCGMEEDPMPILEKLLHLKSVRLARKAFLGSRMVCSKGGFPQLCVIEISKES 830

Query: 92  KCSSIVIHRGALRSLKILGLSSIPNLRVVPSGIQNLENLEVLEISYMSKKFNKSIVP 148
           +    ++  G++  L+ L +     L+ +P G++ + +L+ L+I  M +++ + +VP
Sbjct: 831 ELEEWIVEEGSMPCLRTLTIDDCKKLKELPDGLKYITSLKELKIEGMKREWKEKLVP 887


>AT5G43470.1 | Symbols: RPP8, HRT, RCY1 | Disease resistance protein
           (CC-NBS-LRR class) family | chr5:17463130-17466658
           REVERSE LENGTH=908
          Length = 908

 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/117 (23%), Positives = 60/117 (51%)

Query: 32  NLERLCLEFCNLTDDPFKSLQNMPNLLYFRLTGDFNEGEMVQFQEGGFQKLKELNLAVLH 91
           +L  L L +C + +DP   L+ + +L   RL      G  +   +GGF +L  + ++   
Sbjct: 771 HLVHLFLIYCGMEEDPMPILEKLLHLKSVRLARKAFLGSRMVCSKGGFPQLCVIEISKES 830

Query: 92  KCSSIVIHRGALRSLKILGLSSIPNLRVVPSGIQNLENLEVLEISYMSKKFNKSIVP 148
           +    ++  G++  L+ L +     L+ +P G++ + +L+ L+I  M +++ + +VP
Sbjct: 831 ELEEWIVEEGSMPCLRTLTIDDCKKLKELPDGLKYITSLKELKIEGMKREWKEKLVP 887


>AT5G35450.1 | Symbols:  | Disease resistance protein (CC-NBS-LRR
           class) family | chr5:13667809-13670685 FORWARD
           LENGTH=901
          Length = 901

 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 27/119 (22%), Positives = 62/119 (52%)

Query: 32  NLERLCLEFCNLTDDPFKSLQNMPNLLYFRLTGDFNEGEMVQFQEGGFQKLKELNLAVLH 91
           ++  + L FC++ +DP   L+ + +L    L      G  +   +GGF +L+ L ++   
Sbjct: 762 HIAHIYLLFCHMEEDPMPILEKLLHLKSVELRRKAFIGRRMVCSKGGFPQLRALQISEQS 821

Query: 92  KCSSIVIHRGALRSLKILGLSSIPNLRVVPSGIQNLENLEVLEISYMSKKFNKSIVPDD 150
           +    ++  G++  L+ L + S   L  +P G++ + +L+ L+I  M +++ + +V +D
Sbjct: 822 ELEEWIVEEGSMPCLRDLIIHSCEKLEELPDGLKYVTSLKELKIEGMKREWKEKLVGED 880