Miyakogusa Predicted Gene
- Lj0g3v0159409.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0159409.1 Non Chatacterized Hit- tr|I1N0E2|I1N0E2_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,45.93,2e-19,L
domain-like,NULL; no description,NULL,CUFF.9877.1
(159 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G07040.1 | Symbols: RPM1, RPS3 | NB-ARC domain-containing dis... 63 9e-11
AT5G43470.2 | Symbols: RPP8, HRT, RCY1 | Disease resistance prot... 47 5e-06
AT5G43470.1 | Symbols: RPP8, HRT, RCY1 | Disease resistance prot... 47 5e-06
AT5G35450.1 | Symbols: | Disease resistance protein (CC-NBS-LRR... 46 9e-06
>AT3G07040.1 | Symbols: RPM1, RPS3 | NB-ARC domain-containing
disease resistance protein | chr3:2226244-2229024
REVERSE LENGTH=926
Length = 926
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 69/130 (53%), Gaps = 2/130 (1%)
Query: 17 VGKIKKLLDWVPMLQNLERLCLEFCNLTDDPFKSLQNMPNLLYFRLTGDFNEGEMVQFQE 76
GK++++ W LQNL L L L ++ S+Q +P L++ + G ++F +
Sbjct: 765 AGKLERVPSWFNTLQNLTYLGLRGSQLQENAILSIQTLPRLVWLSFYNAYM-GPRLRFAQ 823
Query: 77 GGFQKLKELNLAVLHKCSSIVIHRGALRSLKILGLSSIPNLRVVPSGIQNLENLEVLEIS 136
G FQ LK L + + + +VI GA+ L+ L + + L VP GI+NL NL+ L +
Sbjct: 824 G-FQNLKILEIVQMKHLTEVVIEDGAMFELQKLYVRACRGLEYVPRGIENLINLQELHLI 882
Query: 137 YMSKKFNKSI 146
++S + + I
Sbjct: 883 HVSNQLVERI 892
>AT5G43470.2 | Symbols: RPP8, HRT, RCY1 | Disease resistance protein
(CC-NBS-LRR class) family | chr5:17463130-17466658
REVERSE LENGTH=908
Length = 908
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 60/117 (51%)
Query: 32 NLERLCLEFCNLTDDPFKSLQNMPNLLYFRLTGDFNEGEMVQFQEGGFQKLKELNLAVLH 91
+L L L +C + +DP L+ + +L RL G + +GGF +L + ++
Sbjct: 771 HLVHLFLIYCGMEEDPMPILEKLLHLKSVRLARKAFLGSRMVCSKGGFPQLCVIEISKES 830
Query: 92 KCSSIVIHRGALRSLKILGLSSIPNLRVVPSGIQNLENLEVLEISYMSKKFNKSIVP 148
+ ++ G++ L+ L + L+ +P G++ + +L+ L+I M +++ + +VP
Sbjct: 831 ELEEWIVEEGSMPCLRTLTIDDCKKLKELPDGLKYITSLKELKIEGMKREWKEKLVP 887
>AT5G43470.1 | Symbols: RPP8, HRT, RCY1 | Disease resistance protein
(CC-NBS-LRR class) family | chr5:17463130-17466658
REVERSE LENGTH=908
Length = 908
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 60/117 (51%)
Query: 32 NLERLCLEFCNLTDDPFKSLQNMPNLLYFRLTGDFNEGEMVQFQEGGFQKLKELNLAVLH 91
+L L L +C + +DP L+ + +L RL G + +GGF +L + ++
Sbjct: 771 HLVHLFLIYCGMEEDPMPILEKLLHLKSVRLARKAFLGSRMVCSKGGFPQLCVIEISKES 830
Query: 92 KCSSIVIHRGALRSLKILGLSSIPNLRVVPSGIQNLENLEVLEISYMSKKFNKSIVP 148
+ ++ G++ L+ L + L+ +P G++ + +L+ L+I M +++ + +VP
Sbjct: 831 ELEEWIVEEGSMPCLRTLTIDDCKKLKELPDGLKYITSLKELKIEGMKREWKEKLVP 887
>AT5G35450.1 | Symbols: | Disease resistance protein (CC-NBS-LRR
class) family | chr5:13667809-13670685 FORWARD
LENGTH=901
Length = 901
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 62/119 (52%)
Query: 32 NLERLCLEFCNLTDDPFKSLQNMPNLLYFRLTGDFNEGEMVQFQEGGFQKLKELNLAVLH 91
++ + L FC++ +DP L+ + +L L G + +GGF +L+ L ++
Sbjct: 762 HIAHIYLLFCHMEEDPMPILEKLLHLKSVELRRKAFIGRRMVCSKGGFPQLRALQISEQS 821
Query: 92 KCSSIVIHRGALRSLKILGLSSIPNLRVVPSGIQNLENLEVLEISYMSKKFNKSIVPDD 150
+ ++ G++ L+ L + S L +P G++ + +L+ L+I M +++ + +V +D
Sbjct: 822 ELEEWIVEEGSMPCLRDLIIHSCEKLEELPDGLKYVTSLKELKIEGMKREWKEKLVGED 880