Miyakogusa Predicted Gene

Lj0g3v0159229.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0159229.1 tr|B9H159|B9H159_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_855855 PE=4
SV=1,67.45,0,AMIDASE,NULL; AMIDASE,Amidase; seg,NULL; no
description,Amidase signature domain; Amidase,Amidase,CUFF.9861.1
         (339 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G34880.1 | Symbols:  | Amidase family protein | chr4:16615549...   255   2e-68
AT5G07360.1 | Symbols:  | Amidase family protein | chr5:2326925-...   114   7e-26
AT5G07360.2 | Symbols:  | Amidase family protein | chr5:2326925-...   104   8e-23
AT3G25660.1 | Symbols:  | Amidase family protein | chr3:9339640-...    84   2e-16
AT5G64440.1 | Symbols: AtFAAH, FAAH | fatty acid amide hydrolase...    72   4e-13
AT1G08980.1 | Symbols: ATAMI1, AMI1, ATTOC64-I, TOC64-I | amidas...    71   1e-12
AT5G09420.1 | Symbols: ATTOC64-V, MTOM64, TOC64-V, OM64, AtmtOM6...    60   2e-09
AT3G17970.1 | Symbols: atToc64-III, TOC64-III | translocon at th...    50   2e-06

>AT4G34880.1 | Symbols:  | Amidase family protein |
           chr4:16615549-16617424 FORWARD LENGTH=466
          Length = 466

 Score =  255 bits (652), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 139/263 (52%), Positives = 164/263 (62%), Gaps = 48/263 (18%)

Query: 39  FNIHEATIEEIQDAFTRHHLTSRELVDFYLHRIEALNPILRAVLEVNPXXXXXXXXXXXX 98
           F+I EATIE+I+ AF    LTS++LV+ YL  I  LNPIL AV+E NP            
Sbjct: 38  FSIQEATIEDIRVAFNEKRLTSKQLVELYLEAISKLNPILHAVIETNPDALIQAEIADRE 97

Query: 99  X-XXXXXXXSLLHGVPVLLKDSIATVDEMNTTAGSFALLGSKVARDAHVVARLRDAGAVI 157
                     +LHGVPVLLKDSI+T D++NTTAGSFALLGS VARDA VV RLR++GAVI
Sbjct: 98  RDLKNTTKLPILHGVPVLLKDSISTKDKLNTTAGSFALLGSVVARDAGVVKRLRESGAVI 157

Query: 158 LGKASLSEWYTLRSSTMPEAWCARGGLALNPYVESRSPCGSSFGSAISVATNMVAVSLGT 217
           LGKASLSEW   RS ++P+ W A                                     
Sbjct: 158 LGKASLSEWAHFRSFSIPDGWSA------------------------------------- 180

Query: 218 ETDGSIICPADHNSVVGFKPTVGLTSRAGVIPISPRQDTIGPICRTVSDAVHVLDVIVGF 277
                       NSVVG KP+VGLTSRAGV+PIS RQD+IGPICRTVSDAVH+LD IVG+
Sbjct: 181 ---------PSQNSVVGIKPSVGLTSRAGVVPISLRQDSIGPICRTVSDAVHLLDAIVGY 231

Query: 278 DPRDSEATESAAEFIPQGGYKQF 300
           DP D EAT++A+EFIP+GGYKQF
Sbjct: 232 DPLD-EATKTASEFIPEGGYKQF 253


>AT5G07360.1 | Symbols:  | Amidase family protein |
           chr5:2326925-2330011 REVERSE LENGTH=659
          Length = 659

 Score =  114 bits (286), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 115/251 (45%), Gaps = 9/251 (3%)

Query: 40  NIHEATIEEIQDAFTRHHLTSRELVDFYLHRIEALNPILRAVLEVNPXXXXXXXXXXXXX 99
           +I   ++ E+ +      +TS+ELV  YL +++  N +L AV+                 
Sbjct: 199 DIAFMSVLELGELIKTRQITSKELVRIYLKQLKRYNHVLEAVVTYTEELAYKQAKEADDL 258

Query: 100 XXXXXXXSLLHGVPVLLKDSIATVDEMNTTAGSFALLGSKVARDAHVVARLRDAGAVILG 159
                    LHG+P  LKD +A V    TT GS +     +  +A V  RL+ +GAV++ 
Sbjct: 259 LSQGTYLGPLHGIPYGLKDIVA-VPGYKTTWGSTSFKDQFLDIEAWVYKRLKASGAVLVA 317

Query: 160 KASLSEWYTLRSSTMPEAWCARGGLALNPYVESRSPCGSSFGSAISVATNMVAVSLGTET 219
           K          S    + W   GG   NP+       GSS G A S +  MV  ++G+ET
Sbjct: 318 KLVTG------SMAYDDIWF--GGRTRNPWNIEEFSTGSSAGPAASTSAGMVPFAIGSET 369

Query: 220 DGSIICPADHNSVVGFKPTVGLTSRAGVIPISPRQDTIGPICRTVSDAVHVLDVIVGFDP 279
            GS+  PA    +   +PT G   R GV+ IS   D +GP CRT +D   +LD I G DP
Sbjct: 370 AGSMTYPAARCGITALRPTFGSVGRTGVMSISESLDKLGPFCRTAADCAVILDAIKGKDP 429

Query: 280 RDSEATESAAE 290
            D  + E A E
Sbjct: 430 DDLSSREIAFE 440


>AT5G07360.2 | Symbols:  | Amidase family protein |
           chr5:2326925-2330011 REVERSE LENGTH=652
          Length = 652

 Score =  104 bits (260), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 111/251 (44%), Gaps = 16/251 (6%)

Query: 40  NIHEATIEEIQDAFTRHHLTSRELVDFYLHRIEALNPILRAVLEVNPXXXXXXXXXXXXX 99
           +I   ++ E+ +      +TS+ELV  YL +++  N +L AV+                 
Sbjct: 199 DIAFMSVLELGELIKTRQITSKELVRIYLKQLKRYNHVLEAVVTYTEELAYKQAKEADDL 258

Query: 100 XXXXXXXSLLHGVPVLLKDSIATVDEMNTTAGSFALLGSKVARDAHVVARLRDAGAVILG 159
                    LHG+P  LKD +A V    TT GS +     +  +A V  RL+ +GAV++ 
Sbjct: 259 LSQGTYLGPLHGIPYGLKDIVA-VPGYKTTWGSTSFKDQFLDIEAWVYKRLKASGAVLVA 317

Query: 160 KASLSEWYTLRSSTMPEAWCARGGLALNPYVESRSPCGSSFGSAISVATNMVAVSLGTET 219
           K          S    + W   GG   NP+       GSS G A S        S G+ET
Sbjct: 318 KLVTG------SMAYDDIWF--GGRTRNPWNIEEFSTGSSAGPAAST-------SAGSET 362

Query: 220 DGSIICPADHNSVVGFKPTVGLTSRAGVIPISPRQDTIGPICRTVSDAVHVLDVIVGFDP 279
            GS+  PA    +   +PT G   R GV+ IS   D +GP CRT +D   +LD I G DP
Sbjct: 363 AGSMTYPAARCGITALRPTFGSVGRTGVMSISESLDKLGPFCRTAADCAVILDAIKGKDP 422

Query: 280 RDSEATESAAE 290
            D  + E A E
Sbjct: 423 DDLSSREIAFE 433


>AT3G25660.1 | Symbols:  | Amidase family protein |
           chr3:9339640-9342044 REVERSE LENGTH=537
          Length = 537

 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 117/237 (49%), Gaps = 8/237 (3%)

Query: 59  TSRELVDFYLHRIEALNPILRAVLEVNPXXXXXXXXXXXXXXXXXXXXSLLHGVPVLLKD 118
           T+ E+   YL RI    P L+  L V+                      L  GV + +KD
Sbjct: 59  TAVEIAKSYLSRIRLTEPQLKCFLHVSENVLKDAQEIDQRIAKGEELGPL-AGVLIGVKD 117

Query: 119 SIATVDEMNTTAGSFALLGSKVARDAHVVARLRDAGAVILGKASLSEWYTLRSSTMPEAW 178
           +I T   M +TA S  L   +   DA  V ++++ G +++GK ++ E + + S+T   A+
Sbjct: 118 NICT-QGMPSTAASRILEHYRPPFDATAVKKIKELGGIVVGKTNMDE-FGMGSTTEASAF 175

Query: 179 CARGGLALNPYVESRSPCGSSFGSAISVATNMVAVSLGTETDGSIICPADHNSVVGFKPT 238
                +  NP+  SR P GSS GSA +VA     VSLG++T GS+  PA    VVG KPT
Sbjct: 176 Q----VTANPWDLSRVPGGSSGGSAAAVAARQCMVSLGSDTGGSVRQPASFCGVVGLKPT 231

Query: 239 VGLTSRAGVIPISPRQDTIGPICRTVSDAVHVLDVIVGFDPRDSEAT-ESAAEFIPQ 294
            G  SR G++  +   D IG    TV+DA  +L  I G+D  DS ++ +   EF  Q
Sbjct: 232 YGRVSRFGLMAYASSLDVIGCFGSTVADAGMLLHAISGYDRFDSTSSKQDVPEFQSQ 288


>AT5G64440.1 | Symbols: AtFAAH, FAAH | fatty acid amide hydrolase |
           chr5:25766229-25770260 FORWARD LENGTH=607
          Length = 607

 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 82/170 (48%), Gaps = 5/170 (2%)

Query: 107 SLLHGVPVLLKDSIATVDEMNTTAGSFALLGSKVARDAHVVARLRDAGAVILGKASLSEW 166
           S+L G+ V +KD I  +        ++      V +D+ VV++LR  GA++LGKA++ E 
Sbjct: 195 SVLDGIFVTIKDDIDCLPHPTNGGTTWLHEDRSVEKDSAVVSKLRSCGAILLGKANMHEL 254

Query: 167 YTLRSSTMPEAWCARGGLALNPYVESRSPCGSSFGSAISVATNMVAVSLGTETDGSIICP 226
               +        +  G   NP+   R   GSS GSA  VA  + + +LGT+  GS+  P
Sbjct: 255 GMGTTGNN-----SNYGTTRNPHDPKRYTGGSSSGSAAIVAAGLCSAALGTDGGGSVRIP 309

Query: 227 ADHNSVVGFKPTVGLTSRAGVIPISPRQDTIGPICRTVSDAVHVLDVIVG 276
           +    + G K T G T   G +      + IGP+  ++ DA  V   I+G
Sbjct: 310 SALCGITGLKTTYGRTDMTGSLCEGGTVEIIGPLASSLEDAFLVYAAILG 359


>AT1G08980.1 | Symbols: ATAMI1, AMI1, ATTOC64-I, TOC64-I | amidase 1
           | chr1:2884455-2886430 FORWARD LENGTH=425
          Length = 425

 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 65/126 (51%), Gaps = 7/126 (5%)

Query: 138 SKVARDAHVVARLRDAGAVILGKASLSEW-YTLRSSTMPEAWCARGGLALNPYVESRSPC 196
           S     A VV+ L +AGA  LG   + E  Y++          A  G   NP    R P 
Sbjct: 58  SAATSTAPVVSSLLEAGATALGITIMDEMAYSINGEN------AHYGTPRNPIAFDRVPG 111

Query: 197 GSSFGSAISVATNMVAVSLGTETDGSIICPADHNSVVGFKPTVGLTSRAGVIPISPRQDT 256
           GSS GSA++VA  +V  S+GT+T GS+  PA +  + GF+P+ G  S  G+ P++   DT
Sbjct: 112 GSSSGSAVAVAARLVDFSIGTDTGGSVRVPASYCGIFGFRPSHGAVSTVGLTPMAQSFDT 171

Query: 257 IGPICR 262
           +G   R
Sbjct: 172 VGWFAR 177


>AT5G09420.1 | Symbols: ATTOC64-V, MTOM64, TOC64-V, OM64, AtmtOM64 |
           translocon at the outer membrane of chloroplasts 64-V |
           chr5:2928316-2931750 FORWARD LENGTH=603
          Length = 603

 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 5/117 (4%)

Query: 142 RDAHVVARLRDAGAVILGKASLSEWYTLRSSTMPEAWCARGGLALNPYVESRSPCGSSFG 201
           + A VV  L   GA  +GK  + E   L    + E      G  +NP +    P G S G
Sbjct: 105 KTAVVVTTLLKNGATCVGKTIMDE---LGFGIIGEN--KHYGTPINPLMPDNVPGGCSSG 159

Query: 202 SAISVATNMVAVSLGTETDGSIICPADHNSVVGFKPTVGLTSRAGVIPISPRQDTIG 258
           SA+SV   +V  SLG +T G +  PA    ++GF+P+ G  S  GV+P S   +T+G
Sbjct: 160 SAVSVGAELVDFSLGIDTTGGVRVPAAFCGILGFRPSQGTVSSVGVLPNSQSLETVG 216


>AT3G17970.1 | Symbols: atToc64-III, TOC64-III | translocon at the
           outer membrane of chloroplasts 64-III |
           chr3:6148030-6151794 FORWARD LENGTH=589
          Length = 589

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 8/129 (6%)

Query: 146 VVARLRDAGAVILGKASLSEWYTLRSSTMPEAWCARGGLALNPYVESRSPCGSSFGSAIS 205
           VV+ L + GA  +GK  + E +    S   + + +      NP   +R P G+  G+A++
Sbjct: 96  VVSTLVEGGATCVGKTVVDE-FAFSISGENKHYDS----PTNPAAPTRIPGGACSGAAVA 150

Query: 206 VATNMVAVSLGTETDGSIICPADHNSVVGFKPTVGLTSRAGVIPISPRQDTIGPICR--- 262
           VATN V  +LG +T G +  PA +  V+GFK + G  S  G+IP+S   D++G   R   
Sbjct: 151 VATNAVDFALGIDTVGGVRVPAGYCGVLGFKSSYGAISNTGIIPVSSSLDSVGWFARDPN 210

Query: 263 TVSDAVHVL 271
           T+    HVL
Sbjct: 211 TLRRVGHVL 219