Miyakogusa Predicted Gene

Lj0g3v0159039.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0159039.1 tr|G7J2I8|G7J2I8_MEDTR Chloroplast small heat
shock protein OS=Medicago truncatula GN=MTR_3g086050 P,67.36,0,HEAT
SHOCK PROTEIN 26,NULL; SMALL HEAT-SHOCK PROTEIN (HSP20) FAMILY,NULL;
seg,NULL; HSP20,Alpha crys,CUFF.9836.1
         (266 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G27670.1 | Symbols: HSP21 | heat shock protein 21 | chr4:1381...   135   3e-32
AT4G25200.1 | Symbols: ATHSP23.6-MITO, HSP23.6-MITO | mitochondr...    78   7e-15
AT1G52560.1 | Symbols:  | HSP20-like chaperones superfamily prot...    77   1e-14
AT1G52560.2 | Symbols:  | HSP20-like chaperones superfamily prot...    77   1e-14
AT5G51440.1 | Symbols:  | HSP20-like chaperones superfamily prot...    75   6e-14
AT1G07400.1 | Symbols:  | HSP20-like chaperones superfamily prot...    64   9e-11
AT1G59860.1 | Symbols:  | HSP20-like chaperones superfamily prot...    57   2e-08
AT1G53540.1 | Symbols:  | HSP20-like chaperones superfamily prot...    55   5e-08
AT5G37670.1 | Symbols:  | HSP20-like chaperones superfamily prot...    49   3e-06
AT4G10250.1 | Symbols: ATHSP22.0 | HSP20-like chaperones superfa...    49   3e-06

>AT4G27670.1 | Symbols: HSP21 | heat shock protein 21 |
           chr4:13819048-13819895 REVERSE LENGTH=227
          Length = 227

 Score =  135 bits (340), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 71/170 (41%), Positives = 104/170 (61%), Gaps = 14/170 (8%)

Query: 98  QPKKRV-VPSAPIGLWDRFSTARTVSQMMETMERMMEDPFALSTLEYPSSPLPSEGYRTR 156
           +P++R+ +  +P GL D  S  RT+ QM++TM+RM ED   +S      S +      + 
Sbjct: 71  RPQQRLTMDVSPFGLLDPLSPMRTMRQMLDTMDRMFEDTMPVSGRNRGGSGV------SE 124

Query: 157 GRAPWEIKEGECEYKMRFDMPGMIKEDVKVWVEEKMLVVKAEKTPXXXXXXXXXXXXXWS 216
            RAPW+IKE E E KMRFDMPG+ KEDVK+ VE+ +LV+K E+               WS
Sbjct: 125 IRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQ-------KKEDSDDSWS 177

Query: 217 AKSYGRYSSRIALPENVQYEKIKAEIRDGVLYITIPKATTYSNVLDIHVQ 266
            +S   Y +R+ LP+N + +KIKAE+++GVL+ITIPK      V+D+ +Q
Sbjct: 178 GRSVSSYGTRLQLPDNCEKDKIKAELKNGVLFITIPKTKVERKVIDVQIQ 227


>AT4G25200.1 | Symbols: ATHSP23.6-MITO, HSP23.6-MITO |
           mitochondrion-localized small heat shock protein 23.6 |
           chr4:12917089-12917858 FORWARD LENGTH=210
          Length = 210

 Score = 77.8 bits (190), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 17/144 (11%)

Query: 111 LWDRFSTARTVSQMMETMERMMEDPFALSTLEYPSSPLPSEGYRTRGRAPWEIKEGECEY 170
           ++D FS  R+VSQ++  M++ ME+P   +T    +S           R  W+IKE +   
Sbjct: 68  VFDPFSPTRSVSQVLNLMDQFMENPLLSATRGMGASG---------ARRGWDIKEKDDAL 118

Query: 171 KMRFDMPGMIKEDVKVWVEEKMLVVKAEKTPXXXXXXXXXXXXXWSAKSYGRYSSRIALP 230
            +R DMPG+ +EDVK+ +E+  LV++ E                       R++SRI LP
Sbjct: 119 YLRIDMPGLSREDVKLALEQDTLVIRGEGKNEEDGGEEGESGNR-------RFTSRIGLP 171

Query: 231 ENV-QYEKIKAEIRDGVLYITIPK 253
           + + + ++IKAE+++GVL + IPK
Sbjct: 172 DKIYKIDEIKAEMKNGVLKVVIPK 195


>AT1G52560.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:19574783-19575766 REVERSE LENGTH=232
          Length = 232

 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 66/106 (62%), Gaps = 2/106 (1%)

Query: 162 EIKEGECEYKMRFDMPGMIKEDVKVWVEEKMLVVKAEKTPXXXXXXXXXXXXXWSAKSYG 221
           ++KE +  YK+R+++PG+ KEDVK+ V + +L +K +                WS+KSYG
Sbjct: 128 QVKEQDDCYKLRYEVPGLTKEDVKITVNDGILTIKGDHK-AEEEKGSPEEDEYWSSKSYG 186

Query: 222 RYSSRIALPENVQYEKIKAEIRDGVLYITIPKATT-YSNVLDIHVQ 266
            Y++ ++LP++ + E IKAE+++GVL + IP+      NV +I V+
Sbjct: 187 YYNTSLSLPDDAKVEDIKAELKNGVLNLVIPRTEKPKKNVQEISVE 232


>AT1G52560.2 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:19574783-19575766 REVERSE LENGTH=225
          Length = 225

 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 66/106 (62%), Gaps = 2/106 (1%)

Query: 162 EIKEGECEYKMRFDMPGMIKEDVKVWVEEKMLVVKAEKTPXXXXXXXXXXXXXWSAKSYG 221
           ++KE +  YK+R+++PG+ KEDVK+ V + +L +K +                WS+KSYG
Sbjct: 121 QVKEQDDCYKLRYEVPGLTKEDVKITVNDGILTIKGDHKAEEEKGSPEEDEY-WSSKSYG 179

Query: 222 RYSSRIALPENVQYEKIKAEIRDGVLYITIPKATT-YSNVLDIHVQ 266
            Y++ ++LP++ + E IKAE+++GVL + IP+      NV +I V+
Sbjct: 180 YYNTSLSLPDDAKVEDIKAELKNGVLNLVIPRTEKPKKNVQEISVE 225


>AT5G51440.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr5:20891242-20892013 FORWARD LENGTH=210
          Length = 210

 Score = 74.7 bits (182), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 77/144 (53%), Gaps = 19/144 (13%)

Query: 111 LWDRFSTARTVSQMMETMERMMEDPFALSTLEYPSSPLPSEGYRTRGRAPWEIKEGECEY 170
           + D F+  R++SQM+  M+++ E P   +T    +S +         R  W +KE +   
Sbjct: 70  ILDPFTPTRSLSQMLNFMDQVSEIPLVSATRGMGASGV---------RRGWNVKEKDDAL 120

Query: 171 KMRFDMPGMIKEDVKVWVEEKMLVVKAEKTPXXXXXXXXXXXXXWSAKSYGRYSSRIALP 230
            +R DMPG+ +EDVK+ +E+  LV++ E                  +    R++SRI LP
Sbjct: 121 HLRIDMPGLSREDVKLALEQNTLVIRGEGETEEGEDV---------SGDGRRFTSRIELP 171

Query: 231 ENV-QYEKIKAEIRDGVLYITIPK 253
           E V + ++IKAE+++GVL + IPK
Sbjct: 172 EKVYKTDEIKAEMKNGVLKVVIPK 195


>AT1G07400.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:2275148-2275621 FORWARD LENGTH=157
          Length = 157

 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 14/128 (10%)

Query: 134 DPFALST------LEYPSSPLPSEGYRTRGRAPWEIKEGECEYKMRFDMPGMIKEDVKVW 187
           DPF+L        L++PSS        T  R  W  KE    +  + D+PGM KE+VKV 
Sbjct: 19  DPFSLDVWDPFKELQFPSSLSGETSAITNARVDW--KETAEAHVFKADLPGMKKEEVKVE 76

Query: 188 VEEKMLVVKAEKTPXXXXXXXXXXXXXWS--AKSYGRYSSRIALPENVQYEKIKAEIRDG 245
           +E+  ++    K               W    +S G++S +  LPENV+ +++KA + +G
Sbjct: 77  IEDDSVL----KISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENG 132

Query: 246 VLYITIPK 253
           VL +T+PK
Sbjct: 133 VLTVTVPK 140


>AT1G59860.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:22031474-22031941 FORWARD LENGTH=155
          Length = 155

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 7/126 (5%)

Query: 134 DPFALSTLE-YPSSPLPSEGYRTRGRAPWEIKEGECEYKMRFDMPGMIKEDVKVWVEEKM 192
           DPF+L   + +     PS        A  + KE    +  + D+PGM KE+VKV +E+  
Sbjct: 20  DPFSLDVWDPFKELQFPSSSSSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDS 79

Query: 193 LVVKAEKTPXXXXXXXXXXXXXWS--AKSYGRYSSRIALPENVQYEKIKAEIRDGVLYIT 250
           ++    K               W    +S G +S +  LPENV+ +++KA + +GVL +T
Sbjct: 80  VL----KISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENGVLTVT 135

Query: 251 IPKATT 256
           +PK  T
Sbjct: 136 VPKVET 141


>AT1G53540.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:19980510-19980983 FORWARD LENGTH=157
          Length = 157

 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 20/133 (15%)

Query: 134 DPFALSTLE----------YPSSPLPSEGYRTRGRAPWEIKEGECEYKMRFDMPGMIKED 183
           DPF+L   +            ++P       T  +  W  +E    +  + D+PG+ KE+
Sbjct: 17  DPFSLDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDW--RETPEAHVFKADLPGLRKEE 74

Query: 184 VKVWVEE-KMLVVKAEKTPXXXXXXXXXXXXXWS--AKSYGRYSSRIALPENVQYEKIKA 240
           VKV VE+  +L +  E++              W    +S G+++ R  LPEN + E+IKA
Sbjct: 75  VKVEVEDGNILQISGERS-----NENEEKNDKWHRVERSSGKFTRRFRLPENAKMEEIKA 129

Query: 241 EIRDGVLYITIPK 253
            + +GVL +T+PK
Sbjct: 130 SMENGVLSVTVPK 142


>AT5G37670.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr5:14969035-14969448 FORWARD LENGTH=137
          Length = 137

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 3/95 (3%)

Query: 165 EGECEYKMRFDMPGMIKEDVKVWVEE-KMLVVKAEKTPXXXXXXXXXXXXXWSAKSYG-- 221
           E    +  + ++PG  KED+KV +EE  +L ++ E                  A S G  
Sbjct: 28  ESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFSGGGS 87

Query: 222 RYSSRIALPENVQYEKIKAEIRDGVLYITIPKATT 256
            +  RI LPENV+ +++KA + +GVL + +PK T+
Sbjct: 88  EFLRRIELPENVKVDQVKAYVENGVLTVVVPKDTS 122


>AT4G10250.1 | Symbols: ATHSP22.0 | HSP20-like chaperones
           superfamily protein | chr4:6370537-6371124 FORWARD
           LENGTH=195
          Length = 195

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 12/103 (11%)

Query: 157 GRAPW-EIKEGECEYKMRFDMPGMIKEDVKVWVEEK-MLVVKAEKTPXXXXXXXXXXXXX 214
            R  W E  EG   +++  D+PG+ K++VK+ VEE  +L V  E+               
Sbjct: 71  ARVDWKETAEG---HEIMLDIPGLKKDEVKIEVEENGVLRVSGER-----KREEEKKGDQ 122

Query: 215 WS--AKSYGRYSSRIALPENVQYEKIKAEIRDGVLYITIPKAT 255
           W    +SYG++  +  LP+NV  E +KA++ +GVL I + K +
Sbjct: 123 WHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVLTINLTKLS 165