Miyakogusa Predicted Gene

Lj0g3v0158849.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0158849.1 Non Chatacterized Hit- tr|K4BW25|K4BW25_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,52.63,0.0000000000009, ,CUFF.9862.1
         (255 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G76630.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   296   9e-81
AT1G76630.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   296   1e-80

>AT1G76630.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
            superfamily protein | chr1:28759699-28765042 FORWARD
            LENGTH=1140
          Length = 1140

 Score =  296 bits (758), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 147/255 (57%), Positives = 184/255 (72%), Gaps = 3/255 (1%)

Query: 4    ITHAKKASQLVLPDDYIFFAHLLLCRVYAMKGDRLNFQKEYIRCFELKTDCHIGWICLKL 63
            I HA+KAS L LP  Y+F  HL LCR YA  G   N Q+EY  C ELKTD +IGWICLKL
Sbjct: 875  INHARKASSLSLPSSYLFLGHLQLCRAYAANGSTKNMQEEYRACLELKTDSNIGWICLKL 934

Query: 64   MECQYEMLINSNFMDLSIEECIEKGGN---RWMAVYNLVKGMVSLQRRDLLSAEEFMAQA 120
            +E QY +  ++N +++S++EC  +  N    WMAVY+L +G+ S  ++D  SAEEF+AQA
Sbjct: 935  IESQYNLEPDANLLEMSLQECSSQKKNSWKEWMAVYSLARGLDSTGKKDFFSAEEFLAQA 994

Query: 121  CSLVGFDSSVFLCHGAICMELVRQCGGPQFLSQAVKSLTKVYELSLAPLPFTSILVAQAE 180
            CSL+  +S + LCHGA+CMEL RQ    QFLS AVKSL+KV   SL PLP    L+AQA 
Sbjct: 995  CSLLNSESCLLLCHGAVCMELARQSNDSQFLSLAVKSLSKVQASSLFPLPIVYTLLAQAH 1054

Query: 181  GSLGSKERWDRNLHLEWCTWPSEMRPAELYFHMHLLARQLKVGLRTTSNVESYQSPLRWV 240
            GSLGSKE+W++NL LEW  WP EMRPAE+YF MH+LARQ +    TTS +E+YQSP +WV
Sbjct: 1055 GSLGSKEKWEKNLRLEWFCWPPEMRPAEVYFQMHILARQSEDRPETTSGIENYQSPEKWV 1114

Query: 241  IRAIHINPSCMRYWR 255
            IRAIH +PSC RYW+
Sbjct: 1115 IRAIHTDPSCRRYWK 1129


>AT1G76630.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like
            superfamily protein | chr1:28759699-28765042 FORWARD
            LENGTH=1168
          Length = 1168

 Score =  296 bits (758), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 147/255 (57%), Positives = 184/255 (72%), Gaps = 3/255 (1%)

Query: 4    ITHAKKASQLVLPDDYIFFAHLLLCRVYAMKGDRLNFQKEYIRCFELKTDCHIGWICLKL 63
            I HA+KAS L LP  Y+F  HL LCR YA  G   N Q+EY  C ELKTD +IGWICLKL
Sbjct: 903  INHARKASSLSLPSSYLFLGHLQLCRAYAANGSTKNMQEEYRACLELKTDSNIGWICLKL 962

Query: 64   MECQYEMLINSNFMDLSIEECIEKGGN---RWMAVYNLVKGMVSLQRRDLLSAEEFMAQA 120
            +E QY +  ++N +++S++EC  +  N    WMAVY+L +G+ S  ++D  SAEEF+AQA
Sbjct: 963  IESQYNLEPDANLLEMSLQECSSQKKNSWKEWMAVYSLARGLDSTGKKDFFSAEEFLAQA 1022

Query: 121  CSLVGFDSSVFLCHGAICMELVRQCGGPQFLSQAVKSLTKVYELSLAPLPFTSILVAQAE 180
            CSL+  +S + LCHGA+CMEL RQ    QFLS AVKSL+KV   SL PLP    L+AQA 
Sbjct: 1023 CSLLNSESCLLLCHGAVCMELARQSNDSQFLSLAVKSLSKVQASSLFPLPIVYTLLAQAH 1082

Query: 181  GSLGSKERWDRNLHLEWCTWPSEMRPAELYFHMHLLARQLKVGLRTTSNVESYQSPLRWV 240
            GSLGSKE+W++NL LEW  WP EMRPAE+YF MH+LARQ +    TTS +E+YQSP +WV
Sbjct: 1083 GSLGSKEKWEKNLRLEWFCWPPEMRPAEVYFQMHILARQSEDRPETTSGIENYQSPEKWV 1142

Query: 241  IRAIHINPSCMRYWR 255
            IRAIH +PSC RYW+
Sbjct: 1143 IRAIHTDPSCRRYWK 1157