Miyakogusa Predicted Gene
- Lj0g3v0158509.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0158509.1 Non Chatacterized Hit- tr|B9RTF6|B9RTF6_RICCO
Pentatricopeptide repeat-containing protein, putative
,26.42,1e-18,PPR,Pentatricopeptide repeat; PPR: pentatricopeptide
repeat domain,Pentatricopeptide repeat; SUBFAMI,CUFF.9800.1
(427 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 433 e-121
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 329 2e-90
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 312 3e-85
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 311 5e-85
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 301 6e-82
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 7e-82
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 296 2e-80
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 294 1e-79
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 2e-78
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 288 5e-78
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 4e-74
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 274 8e-74
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 1e-73
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 272 3e-73
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 269 2e-72
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 4e-72
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 267 9e-72
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 265 3e-71
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 263 1e-70
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 262 4e-70
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 261 5e-70
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 261 6e-70
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 1e-69
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 259 3e-69
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 4e-69
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 7e-69
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 9e-69
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 257 1e-68
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 2e-68
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 2e-68
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 2e-68
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 256 2e-68
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 3e-68
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 5e-68
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 3e-67
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 252 3e-67
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 7e-67
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 4e-66
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 1e-65
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 1e-65
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 4e-64
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 5e-64
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 5e-64
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 241 8e-64
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 1e-63
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 1e-63
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 2e-63
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 2e-63
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 3e-63
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 239 3e-63
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 3e-63
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 4e-63
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 5e-63
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 5e-63
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 238 5e-63
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 7e-63
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 2e-62
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 236 2e-62
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 5e-62
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 6e-62
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 1e-61
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 2e-61
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 233 2e-61
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 8e-61
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 231 8e-61
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 1e-60
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 230 1e-60
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 2e-60
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 4e-60
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 5e-60
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 5e-60
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 8e-60
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 228 8e-60
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 2e-59
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 2e-59
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 2e-59
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 3e-59
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 4e-59
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 6e-59
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 7e-59
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 9e-59
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 223 2e-58
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 3e-58
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 222 3e-58
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 3e-58
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 4e-58
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 222 5e-58
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 5e-58
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 7e-58
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 9e-58
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 219 2e-57
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 2e-57
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 219 4e-57
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 7e-57
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 218 8e-57
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 218 8e-57
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 217 1e-56
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 2e-56
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 3e-56
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 3e-56
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 3e-56
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 3e-56
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 4e-56
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 4e-56
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 5e-56
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 1e-55
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 2e-55
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 213 2e-55
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 213 3e-55
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 1e-54
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 2e-54
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 3e-54
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 3e-54
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 209 4e-54
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 4e-54
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 6e-54
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 6e-54
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 9e-54
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 1e-53
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 1e-53
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 2e-53
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 2e-53
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 2e-53
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 206 2e-53
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 2e-53
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 4e-53
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 5e-53
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 6e-53
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 1e-52
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 2e-52
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 2e-52
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 202 2e-52
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 202 5e-52
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 1e-51
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 199 2e-51
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 3e-51
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 199 4e-51
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 4e-51
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 6e-51
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 198 7e-51
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 4e-50
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 5e-50
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 5e-50
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 194 7e-50
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 8e-50
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 8e-50
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 192 3e-49
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 3e-49
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 191 7e-49
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 8e-49
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 2e-48
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 189 5e-48
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 1e-47
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 1e-47
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 2e-47
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 3e-47
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 186 4e-47
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 185 5e-47
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 5e-47
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 6e-47
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 7e-47
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 7e-47
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 3e-46
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 3e-46
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 5e-46
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 1e-45
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 3e-45
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 3e-45
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 8e-45
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 178 8e-45
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 177 1e-44
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 3e-44
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 176 3e-44
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 173 3e-43
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 5e-43
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 3e-42
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 4e-42
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 5e-42
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 8e-42
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 1e-41
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 2e-39
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 1e-38
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 141 9e-34
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 7e-32
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 5e-28
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 116 3e-26
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 6e-26
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 6e-26
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 114 1e-25
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 113 2e-25
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 113 3e-25
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 9e-25
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 1e-24
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 2e-24
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 2e-24
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 3e-24
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 7e-24
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 106 3e-23
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 4e-23
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 105 5e-23
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 2e-22
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 3e-22
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 5e-22
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 5e-22
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 6e-22
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 7e-22
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 7e-22
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 9e-22
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 4e-21
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 8e-21
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 8e-21
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 9e-21
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 2e-20
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 2e-20
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 96 6e-20
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 8e-20
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 8e-20
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 9e-20
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 94 1e-19
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 2e-19
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 5e-19
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 91 1e-18
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 4e-18
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 89 6e-18
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 9e-18
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 1e-17
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 86 3e-17
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 86 4e-17
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 86 6e-17
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 8e-17
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 9e-17
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 84 3e-16
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 83 4e-16
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 7e-16
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 4e-15
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 6e-14
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-14
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 75 1e-13
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 72 5e-13
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 72 1e-12
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 71 1e-12
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 1e-12
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 69 5e-12
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 69 5e-12
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 9e-12
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 68 1e-11
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 67 2e-11
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 64 2e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 5e-10
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 61 1e-09
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 61 1e-09
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 3e-08
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 57 3e-08
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 57 3e-08
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 54 2e-07
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-07
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 53 4e-07
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 5e-07
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 4e-06
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 50 4e-06
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 5e-06
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 433 bits (1114), Expect = e-121, Method: Compositional matrix adjust.
Identities = 209/397 (52%), Positives = 282/397 (71%), Gaps = 4/397 (1%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMP-GKTGVTWSQMIGGFARNGDTATARRL 59
MPERNV TWNAMI GYM NGD AS +FEE+ + VTW +MI G+ + + AR L
Sbjct: 107 MPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKAREL 166
Query: 60 FDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAE 119
F+ P ELK V W+VM+ Y +ME AR+ FE +PE+N FVWS M+SGY + G V E
Sbjct: 167 FERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHE 226
Query: 120 AETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQ 179
A IF R+ R L IWNT+IAGY QNG+ + A+ AF M+ EG+EPD TV S+LSACAQ
Sbjct: 227 ARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQ 286
Query: 180 LGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAM 239
G LD G+++H +I H+ + +N FV + L+DMYAKCGDL NA VFE + R++ C N+M
Sbjct: 287 SGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSM 346
Query: 240 ISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAI 299
IS AI+GK +E LE F ME+L+++PD ITF+ VL+AC HGG L E L++ S+M+ +
Sbjct: 347 ISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDV 406
Query: 300 EMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIK 359
+ +KH+GC++ LLGR+G+LKEAY L+K M ++PN+TVLGA+LGAC+ H D +MAEQV+K
Sbjct: 407 KPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMK 466
Query: 360 LIGT-NSITRADSHNVL--LSNIYAASEKWEKAEKMR 393
+I T SIT + S N L +SN+YA +E+W+ AE +R
Sbjct: 467 IIETAGSITNSYSENHLASISNLYAHTERWQTAEALR 503
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 136 NTMIAGYVQNGFGERALQAFEEMRAEG-FEPDEFTVVSVLSACA-QLGLLDAGKQIHHMI 193
+ +I ++ G +AL + +R G + P V +L ACA + + GK +H
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPG--WVPLILRACACVVPRVVLGKLLHSES 72
Query: 194 EHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVL 253
+ + V S L+ MY KCG +V+AR VF+ +RN+ WNAMI G+ NG + +
Sbjct: 73 IKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNG---DAV 129
Query: 254 EFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEM-GIKHYGCMVDL 312
G E +++ + +T++ ++ + +A E+ +M E+ +K + M+ +
Sbjct: 130 LASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERM---PFELKNVKAWSVMLGV 186
Query: 313 LGRAGRLKEAYDLIKRMPMEPNETVLGAML 342
++++A + +P E N V M+
Sbjct: 187 YVNNRKMEDARKFFEDIP-EKNAFVWSLMM 215
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 329 bits (844), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 167/408 (40%), Positives = 248/408 (60%), Gaps = 10/408 (2%)
Query: 5 NVVTWNAMISGYMRNGDM--ESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
++ NA+I Y R G + A +FE+M + V+W+ M+GG + G+ ARRLFDE
Sbjct: 151 DIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDE 210
Query: 63 APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAET 122
P + +++W M+DGYAR EM A E+FE MPERN WS+MV GY K G + A
Sbjct: 211 MPQ--RDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARV 268
Query: 123 IFGRIPV--RSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQL 180
+F ++P+ +++ W +IAGY + G + A + ++M A G + D V+S+L+AC +
Sbjct: 269 MFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTES 328
Query: 181 GLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMI 240
GLL G +IH +++ L N +VL+ L+DMYAKCG+L A VF ++++ WN M+
Sbjct: 329 GLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTML 388
Query: 241 SGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKME-AYAI 299
G ++G +E +E F RM IRPD +TF+ VL +C H GL+ E ++ ME Y +
Sbjct: 389 HGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDL 448
Query: 300 EMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIK 359
++HYGC+VDLLGR GRLKEA +++ MPMEPN + GA+LGACR H+++ +A++V+
Sbjct: 449 VPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLD 508
Query: 360 LIGTNSITRADSHNV-LLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
+ D N LLSNIYAA+E WE +R M EK +G
Sbjct: 509 --NLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSG 554
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 169/345 (48%), Gaps = 50/345 (14%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
MP+R++++WN M+ GY R +M A +FE+MP + V+WS M+ G+++ GD AR +F
Sbjct: 211 MPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMF 270
Query: 61 DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPE---------------------- 98
D+ P K VVTWT+++ GYA KG ++ A + + M
Sbjct: 271 DKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGL 330
Query: 99 -----------------RNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAG 141
N +V ++++ Y K G++ +A +F IP + L WNTM+ G
Sbjct: 331 LSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHG 390
Query: 142 YVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVN 201
+G G+ A++ F MR EG PD+ T ++VL +C GL+D G + +E K +
Sbjct: 391 LGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSME-KVYDLV 449
Query: 202 PFV--LSGLVDMYAKCGDLVNARLVFEGFT-QRNICCWNAMISGFAINGK---CREVLEF 255
P V LVD+ + G L A V + + N+ W A++ ++ + +EVL+
Sbjct: 450 PQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDN 509
Query: 256 FGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIE 300
+++ + P + L+ + A A ++ SKM++ +E
Sbjct: 510 LVKLDPCD--PGNYSLLSNIYAAAED--WEGVADIRSKMKSMGVE 550
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 111/228 (48%), Gaps = 12/228 (5%)
Query: 112 CKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVV 171
C++ ++A +F ++ ++ + N++I + QN +A F EM+ G D FT
Sbjct: 64 CRQTNLAV--RVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYP 121
Query: 172 SVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDL--VNARLVFEGFT 229
+L AC+ L K +H+ IE L+ + +V + L+D Y++CG L +A +FE +
Sbjct: 122 FLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMS 181
Query: 230 QRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALE 289
+R+ WN+M+ G G+ R+ F M + D I++ T+L A +S+A E
Sbjct: 182 ERDTVSWNSMLGGLVKAGELRDARRLFDEMP----QRDLISWNTMLDGYARCREMSKAFE 237
Query: 290 VISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETV 337
+ KM E + MV +AG ++ A + +MP+ V
Sbjct: 238 LFEKMP----ERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVV 281
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 312 bits (800), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 151/397 (38%), Positives = 238/397 (59%), Gaps = 4/397 (1%)
Query: 12 MISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKGVV 71
++ Y + G M A F+EMP ++ V+W+ +I G+ R G+ A +LFD+ PH +K VV
Sbjct: 119 VVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPH-VKDVV 177
Query: 72 TWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRS 131
+ M+DG+ + G+M +AR +F+ M + W++M+ GYC + A +F +P R+
Sbjct: 178 IYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERN 237
Query: 132 LEIWNTMIAGYVQNGFGERALQAFEEMRAE-GFEPDEFTVVSVLSACAQLGLLDAGKQIH 190
L WNTMI GY QN + ++ F+EM+A +PD+ T++SVL A + G L G+ H
Sbjct: 238 LVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCH 297
Query: 191 HMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCR 250
++ K+L V + ++DMY+KCG++ A+ +F+ ++ + WNAMI G+A+NG R
Sbjct: 298 CFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNAR 357
Query: 251 EVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMV 310
L+ F M + +PD IT L V++AC HGGL+ E + M + I+HYGCMV
Sbjct: 358 AALDLFVTMM-IEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMV 416
Query: 311 DLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRAD 370
DLLGRAG LKEA DLI MP EPN +L + L AC + D++ AE+++K + D
Sbjct: 417 DLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKK-AVELEPQND 475
Query: 371 SHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
+ VLL N+YAA ++W+ ++ +M +++K GC
Sbjct: 476 GNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGC 512
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 128/262 (48%), Gaps = 44/262 (16%)
Query: 1 MPE-RNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRL 59
MP ++VV +NAM+ G++++GDM SA +F+EM KT +TW+ MI G+ D AR+L
Sbjct: 170 MPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKL 229
Query: 60 FDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELM-------PER------------- 99
FD P + +V+W M+ GY + + + +F+ M P+
Sbjct: 230 FDAMPE--RNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDT 287
Query: 100 ---------NCFVW-----------SSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMI 139
+CFV ++++ Y K G + +A+ IF +P + + WN MI
Sbjct: 288 GALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMI 347
Query: 140 AGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLT 199
GY NG AL F M E +PDE T+++V++AC GL++ G++ H++ L
Sbjct: 348 HGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLN 406
Query: 200 VNPFVLSGLVDMYAKCGDLVNA 221
+VD+ + G L A
Sbjct: 407 AKIEHYGCMVDLLGRAGSLKEA 428
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 121/259 (46%), Gaps = 41/259 (15%)
Query: 74 TVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIP-VRSL 132
T +VD YA+ G+M AR F+ MP R+ W++++SGY + G + A +F ++P V+ +
Sbjct: 117 TGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDV 176
Query: 133 EIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHM 192
I+N M+ G+V++G A + F+EM
Sbjct: 177 VIYNAMMDGFVKSGDMTSARRLFDEM---------------------------------- 202
Query: 193 IEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREV 252
HK + ++ G Y D+ AR +F+ +RN+ WN MI G+ N + +E
Sbjct: 203 -THKTVITWTTMIHG----YCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEG 257
Query: 253 LEFFGRME-NLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVD 311
+ F M+ ++ PD +T L+VL A + G LS ++ ++ +K ++D
Sbjct: 258 IRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILD 317
Query: 312 LLGRAGRLKEAYDLIKRMP 330
+ + G +++A + MP
Sbjct: 318 MYSKCGEIEKAKRIFDEMP 336
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 5/180 (2%)
Query: 117 VAEAETIFGRIPVRSLE-IWNTMIAGYVQNGFGERALQAFEEMRAEG-FEPDEFTVVSVL 174
+ A +F + P R + N+MI Y++ + + ++R E F PD FT ++
Sbjct: 26 IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLT 85
Query: 175 SACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNIC 234
+C+ + G Q+H I + +V +G+VDMYAK G + AR F+ R+
Sbjct: 86 KSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEV 145
Query: 235 CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM 294
W A+ISG+ G+ + F +M ++ D + + ++ G ++ A + +M
Sbjct: 146 SWTALISGYIRCGELDLASKLFDQMPHVK---DVVIYNAMMDGFVKSGDMTSARRLFDEM 202
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 80/196 (40%), Gaps = 47/196 (23%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF-- 60
++ V A++ Y + G++E A +F+EMP K +W+ MI G+A NG+ A LF
Sbjct: 306 DKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVT 365
Query: 61 ---DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFV----WSSMVSGYCK 113
+E P E+ + T G G +E R+ F +M E + MV +
Sbjct: 366 MMIEEKPDEITMLAVITACNHG----GLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGR 421
Query: 114 KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSV 173
GS+ EAE + +P FEP+ + S
Sbjct: 422 AGSLKEAEDLITNMP----------------------------------FEPNGIILSSF 447
Query: 174 LSACAQLGLLDAGKQI 189
LSAC Q ++ ++I
Sbjct: 448 LSACGQYKDIERAERI 463
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 311 bits (797), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 162/412 (39%), Positives = 252/412 (61%), Gaps = 8/412 (1%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPG--KTGVTWSQMIGGFARNGD-TATAR 57
MP+R+ V++N+MI GY++ G + SA +F+ MP K ++W+ MI G+A+ D A
Sbjct: 182 MPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIAS 241
Query: 58 RLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSV 117
+LF + P K +++W M+DGY + G +E A+ +F++MP R+ W++M+ GY K G V
Sbjct: 242 KLFADMPE--KDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFV 299
Query: 118 AEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEG-FEPDEFTVVSVLSA 176
A+T+F ++P R + +N+M+AGYVQN + AL+ F +M E PD+ T+V VL A
Sbjct: 300 HHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPA 359
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
AQLG L +H I K+ + + L+DMY+KCG + +A LVFEG ++I W
Sbjct: 360 IAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHW 419
Query: 237 NAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-E 295
NAMI G AI+G + ++E L+++PD ITF+ VL+AC+H GL+ E L M
Sbjct: 420 NAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRR 479
Query: 296 AYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAE 355
+ IE ++HYGCMVD+L R+G ++ A +LI+ MP+EPN+ + L AC H + + E
Sbjct: 480 KHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGE 539
Query: 356 QVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
V K + + S+ VLLSN+YA+ W+ ++R +M + + EKI GC
Sbjct: 540 LVAKHLILQAGYNPSSY-VLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGC 590
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 135/311 (43%), Gaps = 62/311 (19%)
Query: 100 NCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMR 159
+ F+ + ++ Y K G + + +F R+P R +N+MI GYV+ G A + F+ M
Sbjct: 155 DLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMP 214
Query: 160 AE------------GF--EPDEFTVVSVLSA-CAQLGLLDAGKQIHHMIEHKRL------ 198
E G+ D + S L A + L+ I ++H R+
Sbjct: 215 MEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGL 274
Query: 199 -TVNP----FVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVL 253
V P + ++D YAK G + +A+ +F+ R++ +N+M++G+ N E L
Sbjct: 275 FDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEAL 334
Query: 254 EFFGRMEN-LNIRPDAITFLTVLSACAHGGLLSEALEVI-----------SKMEAYAIEM 301
E F ME ++ PD T + VL A A G LS+A+++ K+ I+M
Sbjct: 335 EIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDM 394
Query: 302 --------------------GIKHYGCMVDLLGRAGRLKEAYDL---IKRMPMEPNETVL 338
I H+ M+ L G + A+D+ I+R+ ++P++
Sbjct: 395 YSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITF 454
Query: 339 GAMLGACRTHS 349
+L AC +HS
Sbjct: 455 VGVLNAC-SHS 464
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 99/201 (49%), Gaps = 13/201 (6%)
Query: 134 IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMI 193
+WN +I + +AL M G D+F++ VL AC++LG + G QIH +
Sbjct: 88 LWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFL 147
Query: 194 EHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVL 253
+ L + F+ + L+ +Y KCG L +R +F+ +R+ +N+MI G+ G
Sbjct: 148 KKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSAR 207
Query: 254 EFFG----RMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCM 309
E F M+NL I++ +++S A S+ +++ SK+ A E + + M
Sbjct: 208 ELFDLMPMEMKNL------ISWNSMISGYAQT---SDGVDIASKLFADMPEKDLISWNSM 258
Query: 310 VDLLGRAGRLKEAYDLIKRMP 330
+D + GR+++A L MP
Sbjct: 259 IDGYVKHGRIEDAKGLFDVMP 279
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 301 bits (771), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 151/411 (36%), Positives = 252/411 (61%), Gaps = 7/411 (1%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
MPERN+V+WN+M+ ++ G ++ A +FE MP + V+W+ M+ G A+NG ARRLF
Sbjct: 166 MPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLF 225
Query: 61 DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEA 120
D P + +++W M+ GYA+ ++ A ++F++MPER+ W++M++G+ + + +A
Sbjct: 226 DCMPE--RNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKA 283
Query: 121 ETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEG-FEPDEFTVVSVLSACAQ 179
+F R+P +++ W TMI GYV+N E AL F +M +G +P+ T VS+LSAC+
Sbjct: 284 CGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSD 343
Query: 180 LGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEG--FTQRNICCWN 237
L L G+QIH +I N V S L++MY+K G+L+ AR +F+ QR++ WN
Sbjct: 344 LAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWN 403
Query: 238 AMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-EA 296
+MI+ +A +G +E +E + +M +P A+T+L +L AC+H GL+ + +E +
Sbjct: 404 SMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRD 463
Query: 297 YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQ 356
++ + +HY C+VDL GRAGRLK+ + I + + GA+L AC H+++ +A++
Sbjct: 464 ESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKE 523
Query: 357 VIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
V+K + A ++ VL+SNIYAA+ K E+A +MR M + +K GC
Sbjct: 524 VVKKVLETGSDDAGTY-VLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGC 573
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 161/331 (48%), Gaps = 23/331 (6%)
Query: 20 GDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKGVVTWTVMVDG 79
G + A +F+ +P + VTW+ +I G+ + GD AR LFD K VVTWT MV G
Sbjct: 60 GKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSR-KNVVTWTAMVSG 118
Query: 80 YARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMI 139
Y R ++ A +F+ MPERN W++M+ GY + G + +A +F +P R++ WN+M+
Sbjct: 119 YLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMV 178
Query: 140 AGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLT 199
VQ G + A+ FE M D + +++ A+ G +D +++ + +
Sbjct: 179 KALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPER--- 231
Query: 200 VNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRM 259
N + ++ YA+ + A +F+ +R+ WN MI+GF N + + F RM
Sbjct: 232 -NIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRM 290
Query: 260 ENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIK-HYGCMVDLLGRAGR 318
N+ I++ T+++ EAL V SKM + +K + G V +L
Sbjct: 291 PEKNV----ISWTTMITGYVENKENEEALNVFSKM---LRDGSVKPNVGTYVSILSACSD 343
Query: 319 L------KEAYDLIKRMPMEPNETVLGAMLG 343
L ++ + LI + + NE V A+L
Sbjct: 344 LAGLVEGQQIHQLISKSVHQKNEIVTSALLN 374
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 301 bits (770), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 160/409 (39%), Positives = 232/409 (56%), Gaps = 7/409 (1%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
+PE + ++N M+S Y+RN + E A F+ MP K +W+ MI G+AR G+ AR LF
Sbjct: 119 IPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELF 178
Query: 61 DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEA 120
K V+W M+ GY G++E A F++ P R W++M++GY K V A
Sbjct: 179 YSMME--KNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELA 236
Query: 121 ETIFGRIPV-RSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQ 179
E +F + V ++L WN MI+GYV+N E L+ F M EG P+ + S L C++
Sbjct: 237 EAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSE 296
Query: 180 LGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAM 239
L L G+QIH ++ L + L+ L+ MY KCG+L +A +FE ++++ WNAM
Sbjct: 297 LSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAM 356
Query: 240 ISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYA 298
ISG+A +G + L F M + IRPD ITF+ VL AC H GL++ + M Y
Sbjct: 357 ISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYK 416
Query: 299 IEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVI 358
+E HY CMVDLLGRAG+L+EA LI+ MP P+ V G +LGACR H ++++AE
Sbjct: 417 VEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAA 476
Query: 359 -KLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
KL+ NS A V L+NIYA+ +WE ++R M + K+ G
Sbjct: 477 EKLLQLNSQNAAGY--VQLANIYASKNRWEDVARVRKRMKESNVVKVPG 523
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 149/328 (45%), Gaps = 13/328 (3%)
Query: 41 SQMIGGFARNGDTATARRLFDEAPHELKGVVTWTVMVDGYARK-GEMEAAREVFELMPER 99
+++I R+GD A R+F K +TW ++ G ++ M A ++F+ +PE
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGM--RAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEP 122
Query: 100 NCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMR 159
+ F ++ M+S Y + + +A++ F R+P + WNTMI GY + G E+A + F M
Sbjct: 123 DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM- 181
Query: 160 AEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLV 219
E +E + +++S + G L+ + + + +++G Y K +
Sbjct: 182 ---MEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITG----YMKAKKVE 234
Query: 220 NARLVFEGFT-QRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSAC 278
A +F+ T +N+ WNAMISG+ N + + L+ F M IRP++ + L C
Sbjct: 235 LAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGC 294
Query: 279 AHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVL 338
+ L ++ + + + ++ + + G L +A+ L + M + +
Sbjct: 295 SELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK-KKDVVAW 353
Query: 339 GAMLGACRTHSDMKMAEQVIKLIGTNSI 366
AM+ H + A + + + N I
Sbjct: 354 NAMISGYAQHGNADKALCLFREMIDNKI 381
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 296 bits (757), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 157/444 (35%), Positives = 252/444 (56%), Gaps = 44/444 (9%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
MPE+N V+W M+ G++++G ++ A ++E +P K + + MI G + G AR +F
Sbjct: 136 MPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIF 195
Query: 61 DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEA 120
DE + V+TWT MV GY + ++ AR++F++MPE+ W+SM+ GY + G + +A
Sbjct: 196 DEMSE--RSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDA 253
Query: 121 ETIFGRIPVRSLEIWNTMIAGYVQ-------------------------------NGFGE 149
E +F +PV+ + N MI+G Q NGF
Sbjct: 254 EELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFEL 313
Query: 150 RALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLV 209
AL F M+ +G P T++S+LS CA L L GKQ+H + + V+ +V S L+
Sbjct: 314 EALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLM 373
Query: 210 DMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRME-NLNIRPDA 268
MY KCG+LV ++L+F+ F ++I WN++ISG+A +G E L+ F M + + +P+
Sbjct: 374 TMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNE 433
Query: 269 ITFLTVLSACAHGGLLSEALEVISKMEA-YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIK 327
+TF+ LSAC++ G++ E L++ ME+ + ++ HY CMVD+LGRAGR EA ++I
Sbjct: 434 VTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMID 493
Query: 328 RMPMEPNETVLGAMLGACRTHSDMKMAE----QVIKLIGTNSITRADSHNVLLSNIYAAS 383
M +EP+ V G++LGACRTHS + +AE ++I++ NS T +LLSN+YA+
Sbjct: 494 SMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTY-----ILLSNMYASQ 548
Query: 384 EKWEKAEKMRGIMVDGESEKIAGC 407
+W ++R +M K GC
Sbjct: 549 GRWADVAELRKLMKTRLVRKSPGC 572
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 177/330 (53%), Gaps = 10/330 (3%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
MP+RN+++WN ++SGYM+NG+++ A VF+ MP + V+W+ ++ G+ NG A LF
Sbjct: 74 MPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLF 133
Query: 61 DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEA 120
+ P K V+WTVM+ G+ + G ++ A +++E++P+++ +SM+ G CK+G V EA
Sbjct: 134 WKMPE--KNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEA 191
Query: 121 ETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQL 180
IF + RS+ W TM+ GY QN + A + F+ M E E + S+L Q
Sbjct: 192 REIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP----EKTEVSWTSMLMGYVQN 247
Query: 181 GLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMI 240
G ++ +++ ++ K + ++SGL + G++ AR VF+ +RN W +I
Sbjct: 248 GRIEDAEELFEVMPVKPVIACNAMISGL----GQKGEIAKARRVFDSMKERNDASWQTVI 303
Query: 241 SGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIE 300
NG E L+ F M+ +RP T +++LS CA L +V +++ +
Sbjct: 304 KIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFD 363
Query: 301 MGIKHYGCMVDLLGRAGRLKEAYDLIKRMP 330
+ + ++ + + G L ++ + R P
Sbjct: 364 VDVYVASVLMTMYIKCGELVKSKLIFDRFP 393
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 175/353 (49%), Gaps = 21/353 (5%)
Query: 8 TWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHEL 67
T N I+ R G + A +F+ K+ +W+ M+ G+ N AR+LFDE P
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPD-- 76
Query: 68 KGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRI 127
+ +++W +V GY + GE++ AR+VF+LMPERN W+++V GY G V AE++F ++
Sbjct: 77 RNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM 136
Query: 128 PVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGK 187
P ++ W M+ G++Q+G + A + +E + + D S++ + G +D +
Sbjct: 137 PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIP----DKDNIARTSMIHGLCKEGRVDEAR 192
Query: 188 QIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAING 247
+I + + + +++G Y + + +AR +F+ ++ W +M+ G+ NG
Sbjct: 193 EIFDEMSERSVITWTTMVTG----YGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNG 248
Query: 248 KCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYG 307
+ + E F E + ++P I ++S G +++A V M+ E +
Sbjct: 249 RIEDAEELF---EVMPVKP-VIACNAMISGLGQKGEIAKARRVFDSMK----ERNDASWQ 300
Query: 308 CMVDLLGRAGRLKEAYD---LIKRMPMEPNETVLGAMLGACRTHSDMKMAEQV 357
++ + R G EA D L+++ + P L ++L C + + + +QV
Sbjct: 301 TVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQV 353
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 158/439 (35%), Positives = 244/439 (55%), Gaps = 35/439 (7%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
MPERN V+W M G + +G ++ A +++ MP K V + MIGG R G AR +F
Sbjct: 136 MPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIF 195
Query: 61 DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEA 120
DE + VVTWT M+ GY + ++ AR++FE+MPE+ W+SM+ GY G + +A
Sbjct: 196 DEMRE--RNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDA 253
Query: 121 ETIFGRIPVRSL--------------EI-----------------WNTMIAGYVQNGFGE 149
E F +P++ + EI W MI Y + GF
Sbjct: 254 EEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFEL 313
Query: 150 RALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLV 209
AL F +M+ +G P +++S+LS CA L L G+Q+H + + + +V S L+
Sbjct: 314 EALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLM 373
Query: 210 DMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAI 269
MY KCG+LV A+LVF+ F+ ++I WN++ISG+A +G E L+ F M + P+ +
Sbjct: 374 TMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKV 433
Query: 270 TFLTVLSACAHGGLLSEALEVISKMEA-YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKR 328
T + +L+AC++ G L E LE+ ME+ + + ++HY C VD+LGRAG++ +A +LI+
Sbjct: 434 TLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIES 493
Query: 329 MPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEK 388
M ++P+ TV GA+LGAC+THS + +AE K + N A ++ VLLS+I A+ KW
Sbjct: 494 MTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTY-VLLSSINASRSKWGD 552
Query: 389 AEKMRGIMVDGESEKIAGC 407
+R M K GC
Sbjct: 553 VAVVRKNMRTNNVSKFPGC 571
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 146/279 (52%), Gaps = 10/279 (3%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
M ERNVV+WN ++SGY++N + A VFE MP + V+W+ M+ G+ + G A LF
Sbjct: 74 MSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLF 133
Query: 61 DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEA 120
P + V+WTVM G G ++ AR+++++MP ++ ++M+ G C++G V EA
Sbjct: 134 WRMPE--RNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEA 191
Query: 121 ETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQL 180
IF + R++ W TMI GY QN + A + FE M E E + S+L
Sbjct: 192 RLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP----EKTEVSWTSMLLGYTLS 247
Query: 181 GLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMI 240
G ++ ++ ++ K + ++ G + + G++ AR VF+ R+ W MI
Sbjct: 248 GRIEDAEEFFEVMPMKPVIACNAMIVG----FGEVGEISKARRVFDLMEDRDNATWRGMI 303
Query: 241 SGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA 279
+ G E L+ F +M+ +RP + +++LS CA
Sbjct: 304 KAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCA 342
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 167/348 (47%), Gaps = 21/348 (6%)
Query: 13 ISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKGVVT 72
IS R G + A F+ + K +W+ ++ G+ NG AR+LFDE + VV+
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSE--RNVVS 81
Query: 73 WTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSL 132
W +V GY + + AR VFELMPERN W++MV GY ++G V EAE++F R+P R+
Sbjct: 82 WNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNE 141
Query: 133 EIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHM 192
W M G + +G ++A + ++ M + D +++ + G +D + I
Sbjct: 142 VSWTVMFGGLIDDGRIDKARKLYDMMPVK----DVVASTNMIGGLCREGRVDEARLIFDE 197
Query: 193 IEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREV 252
+ + + +++G Y + + AR +FE ++ W +M+ G+ ++G+ +
Sbjct: 198 MRERNVVTWTTMITG----YRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDA 253
Query: 253 LEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDL 312
EFF E + ++P I ++ G +S+A V ME + + M+
Sbjct: 254 EEFF---EVMPMKP-VIACNAMIVGFGEVGEISKARRVFDLME----DRDNATWRGMIKA 305
Query: 313 LGRAGRLKEAYDLIKRMPME---PNETVLGAMLGACRTHSDMKMAEQV 357
R G EA DL +M + P+ L ++L C T + ++ QV
Sbjct: 306 YERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQV 353
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 290 bits (741), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 151/407 (37%), Positives = 236/407 (57%), Gaps = 4/407 (0%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
M R+VV+WN +I+GY ++G ++ A +F+E P + TW+ M+ G+ +N AR LF
Sbjct: 245 MNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELF 304
Query: 61 DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEA 120
D+ P + V+W M+ GY + ME A+E+F++MP RN W++M++GY + G ++EA
Sbjct: 305 DKMPE--RNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEA 362
Query: 121 ETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQL 180
+ +F ++P R W MIAGY Q+G AL+ F +M EG + + S LS CA +
Sbjct: 363 KNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADV 422
Query: 181 GLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMI 240
L+ GKQ+H + FV + L+ MY KCG + A +F+ ++I WN MI
Sbjct: 423 VALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMI 482
Query: 241 SGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYAI 299
+G++ +G L FF M+ ++PD T + VLSAC+H GL+ + + M + Y +
Sbjct: 483 AGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGV 542
Query: 300 EMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIK 359
+HY CMVDLLGRAG L++A++L+K MP EP+ + G +LGA R H + ++AE
Sbjct: 543 MPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAAD 602
Query: 360 LIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
I + + VLLSN+YA+S +W K+R M D +K+ G
Sbjct: 603 KIFAMEPENSGMY-VLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPG 648
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 166/329 (50%), Gaps = 20/329 (6%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
+ ++ WN IS YMR G A VF+ MP + V+++ MI G+ RNG+ AR+LFDE
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 63 APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAET 122
P + +V+W VM+ GY R + ARE+FE+MPER+ W++M+SGY + G V +A +
Sbjct: 121 MPE--RDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARS 178
Query: 123 IFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGL 182
+F R+P ++ WN +++ YVQN E A F+ + + +VS C G
Sbjct: 179 VFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSR-------ENWALVSW--NCLLGGF 229
Query: 183 LDAGKQIHHMIEHKRLTVNPFV-LSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMIS 241
+ K + + V V + ++ YA+ G + AR +F+ +++ W AM+S
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVS 289
Query: 242 GFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEM 301
G+ N E E F +M N +++ +L+ G + A E+ M
Sbjct: 290 GYIQNRMVEEARELFDKMPERN----EVSWNAMLAGYVQGERMEMAKELFDVMPC----R 341
Query: 302 GIKHYGCMVDLLGRAGRLKEAYDLIKRMP 330
+ + M+ + G++ EA +L +MP
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMP 370
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 187/392 (47%), Gaps = 74/392 (18%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
MP + V++N MISGY+RNG+ E A +F+EMP + V+W+ MI G+ RN + AR LF
Sbjct: 90 MPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELF 149
Query: 61 DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVS----------- 109
+ P + V +W M+ GYA+ G ++ AR VF+ MPE+N W++++S
Sbjct: 150 EIMPE--RDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEA 207
Query: 110 --------------------GYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGE 149
G+ KK + EA F + VR + WNT+I GY Q+G +
Sbjct: 208 CMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKID 267
Query: 150 RALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQI-HHMIEHKRLTVNPFV---- 204
A Q F+E + D FT +++S Q +++ +++ M E ++ N +
Sbjct: 268 EARQLFDESPVQ----DVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYV 323
Query: 205 ----------------------LSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISG 242
+ ++ YA+CG + A+ +F+ +R+ W AMI+G
Sbjct: 324 QGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAG 383
Query: 243 FAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMG 302
++ +G E L F +ME R + +F + LS CA ALE+ ++ ++ G
Sbjct: 384 YSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCAD----VVALELGKQLHGRLVKGG 439
Query: 303 IKHYGCMVD-----LLGRAGRLKEAYDLIKRM 329
+ GC V + + G ++EA DL K M
Sbjct: 440 YET-GCFVGNALLLMYCKCGSIEEANDLFKEM 470
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 288 bits (737), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 162/407 (39%), Positives = 239/407 (58%), Gaps = 14/407 (3%)
Query: 11 AMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKGV 70
A++ Y + G +E+A +F+ M + V+W+ MI + +N + A +F + E GV
Sbjct: 276 ALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDE--GV 333
Query: 71 VTWTVMVDGY----ARKGEMEAAREVFELMPE----RNCFVWSSMVSGYCKKGSVAEAET 122
V V G A G++E R + +L E RN V +S++S YCK V A +
Sbjct: 334 KPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAAS 393
Query: 123 IFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGL 182
+FG++ R+L WN MI G+ QNG AL F +MR+ +PD FT VSV++A A+L +
Sbjct: 394 MFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSI 453
Query: 183 LDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISG 242
K IH ++ L N FV + LVDMYAKCG ++ ARL+F+ ++R++ WNAMI G
Sbjct: 454 THHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDG 513
Query: 243 FAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYAIEM 301
+ +G + LE F M+ I+P+ +TFL+V+SAC+H GL+ L+ M E Y+IE+
Sbjct: 514 YGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIEL 573
Query: 302 GIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVI-KL 360
+ HYG MVDLLGRAGRL EA+D I +MP++P V GAMLGAC+ H ++ AE+ +L
Sbjct: 574 SMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERL 633
Query: 361 IGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
N ++VLL+NIY A+ WEK ++R M+ K GC
Sbjct: 634 FELNP--DDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGC 678
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 159/308 (51%), Gaps = 10/308 (3%)
Query: 12 MISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPH-ELKGV 70
++S + R G ++ A+ VFE + K V + M+ GFA+ D A + F + +++ V
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPV 134
Query: 71 V-TWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKGSVAEAETIFG 125
V +T ++ + E+ +E+ L+ + + F + + + Y K V EA +F
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFD 194
Query: 126 RIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDA 185
R+P R L WNT++AGY QNG AL+ + M E +P T+VSVL A + L L+
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV 254
Query: 186 GKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAI 245
GK+IH + + LVDMYAKCG L AR +F+G +RN+ WN+MI +
Sbjct: 255 GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 246 NGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKH 305
N +E + F +M + ++P ++ + L ACA G L I K+ ++E+G+
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG-RFIHKL---SVELGLDR 370
Query: 306 YGCMVDLL 313
+V+ L
Sbjct: 371 NVSVVNSL 378
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 176/358 (49%), Gaps = 9/358 (2%)
Query: 16 YMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHE-LK-GVVTW 73
Y + + A VF+ MP + V+W+ ++ G+++NG A + E LK +T
Sbjct: 180 YAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITI 239
Query: 74 TVMVDGYARKGEMEAAREVFELMPERNCF-----VWSSMVSGYCKKGSVAEAETIFGRIP 128
++ + + +E+ R+ F + +++V Y K GS+ A +F +
Sbjct: 240 VSVLPAVSALRLISVGKEIHGY-AMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGML 298
Query: 129 VRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQ 188
R++ WN+MI YVQN + A+ F++M EG +P + +V+ L ACA LG L+ G+
Sbjct: 299 ERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRF 358
Query: 189 IHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGK 248
IH + L N V++ L+ MY KC ++ A +F R + WNAMI GFA NG+
Sbjct: 359 IHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGR 418
Query: 249 CREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGC 308
+ L +F +M + ++PD T+++V++A A + A + + ++ +
Sbjct: 419 PIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA 478
Query: 309 MVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSI 366
+VD+ + G + A LI M E + T AM+ TH K A ++ + + +I
Sbjct: 479 LVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTI 535
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 126/247 (51%), Gaps = 9/247 (3%)
Query: 102 FVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAE 161
F + +VS +C+ GSV EA +F I + +++TM+ G+ + ++ALQ F MR +
Sbjct: 70 FFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD 129
Query: 162 GFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA 221
EP + +L C L GK+IH ++ +++ F ++GL +MYAKC + A
Sbjct: 130 DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEA 189
Query: 222 RLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHG 281
R VF+ +R++ WN +++G++ NG R LE M N++P IT ++VL A +
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL 249
Query: 282 GLLSEALEVISKMEAYAIEMGIKHY----GCMVDLLGRAGRLKEAYDLIKRMPMEPNETV 337
L+S E+ YA+ G +VD+ + G L+ A L M +E N
Sbjct: 250 RLISVGKEI----HGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVS 304
Query: 338 LGAMLGA 344
+M+ A
Sbjct: 305 WNSMIDA 311
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 122/226 (53%), Gaps = 7/226 (3%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
+RNV N++IS Y + ++++A+ +F ++ +T V+W+ MI GFA+NG A F +
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQ 428
Query: 63 APHEL--KGVVTWTVMVDGYARKGEMEAAREVFELM----PERNCFVWSSMVSGYCKKGS 116
T+ ++ A A+ + ++ ++N FV +++V Y K G+
Sbjct: 429 MRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGA 488
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+ A IF + R + WN MI GY +GFG+ AL+ FEEM+ +P+ T +SV+SA
Sbjct: 489 IMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISA 548
Query: 177 CAQLGLLDAGKQIHHMI-EHKRLTVNPFVLSGLVDMYAKCGDLVNA 221
C+ GL++AG + +M+ E+ + ++ +VD+ + G L A
Sbjct: 549 CSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEA 594
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 160/416 (38%), Positives = 244/416 (58%), Gaps = 18/416 (4%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMP----GKTGVTWSQMIGGFARNGDTATARR 58
+ +V +WN MISGY R + E + + EM T VT ++ ++ D +R
Sbjct: 198 KEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKR 257
Query: 59 LFDEAPHELK---GVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKG 115
+ E E K + +V+ YA GEM+ A +F M R+ W+S+V GY ++G
Sbjct: 258 V-HEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERG 316
Query: 116 SVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLS 175
++ A T F ++PVR W MI GY++ G +L+ F EM++ G PDEFT+VSVL+
Sbjct: 317 NLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLT 376
Query: 176 ACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICC 235
ACA LG L+ G+ I I+ ++ + V + L+DMY KCG A+ VF QR+
Sbjct: 377 ACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFT 436
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKME 295
W AM+ G A NG+ +E ++ F +M++++I+PD IT+L VLSAC H G++ +A + +KM
Sbjct: 437 WTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMR 496
Query: 296 A-YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMA 354
+ + IE + HYGCMVD+LGRAG +KEAY+++++MPM PN V GA+LGA R H+D MA
Sbjct: 497 SDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMA 556
Query: 355 E----QVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
E ++++L N A LL NIYA ++W+ ++R +VD +K G
Sbjct: 557 ELAAKKILELEPDNGAVYA-----LLCNIYAGCKRWKDLREVRRKIVDVAIKKTPG 607
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 115/252 (45%), Gaps = 16/252 (6%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
M R+V++W +++ GY+ G+++ A F++MP + ++W+ MI G+ R G + +F
Sbjct: 297 MKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIF 356
Query: 61 DE------APHELKGVVTWTVMVDGYARKGEMEAAREVFELMP----ERNCFVWSSMVSG 110
E P E V T A G +E + + + + V ++++
Sbjct: 357 REMQSAGMIPDEFTMVSVLTAC----AHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDM 412
Query: 111 YCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
Y K G +A+ +F + R W M+ G NG G+ A++ F +M+ +PD+ T
Sbjct: 413 YFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITY 472
Query: 171 VSVLSACAQLGLLDAGKQIH-HMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT 229
+ VLSAC G++D ++ M R+ + +VDM + G + A +
Sbjct: 473 LGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMP 532
Query: 230 QR-NICCWNAMI 240
N W A++
Sbjct: 533 MNPNSIVWGALL 544
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 155/364 (42%), Gaps = 42/364 (11%)
Query: 20 GDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKGVV----TWTV 75
G + A +F ++P V W+ MI G+++ RL+ E GV T+
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKE--GVTPDSHTFPF 139
Query: 76 MVDGYARKGEMEAARE-----VFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVR 130
+++G R G A + V + N +V +++V Y G + A +F R
Sbjct: 140 LLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKE 199
Query: 131 SLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIH 190
+ WN MI+GY + E +++ EM P T++ VLSAC+++ D K++H
Sbjct: 200 DVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVH 259
Query: 191 HMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFA------ 244
+ + + + + LV+ YA CG++ A +F R++ W +++ G+
Sbjct: 260 EYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLK 319
Query: 245 --------------------INGKCR-----EVLEFFGRMENLNIRPDAITFLTVLSACA 279
I+G R E LE F M++ + PD T ++VL+ACA
Sbjct: 320 LARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACA 379
Query: 280 HGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLG 339
H G L + + ++ I+ + ++D+ + G ++A + M T
Sbjct: 380 HLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTA 439
Query: 340 AMLG 343
++G
Sbjct: 440 MVVG 443
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 275 bits (703), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 148/413 (35%), Positives = 233/413 (56%), Gaps = 13/413 (3%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
+ E+N V+WN+++ GY+ +G+++ A VF+++P K V+W+ +I +A+ GD A LF
Sbjct: 165 IAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLF 224
Query: 61 DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEA 120
P LK +W +++ GY EM+ AR F+ MP++N W +M+SGY K G V A
Sbjct: 225 SAMP--LKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSA 282
Query: 121 ETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEM--RAEGFEPDEFTVVSVLSACA 178
E +F + + +++ MIA Y QNG + AL+ F +M R +PDE T+ SV+SA +
Sbjct: 283 EELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANS 342
Query: 179 QLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNA 238
QLG G + I + ++ + + L+D+Y K GD A +F +++ ++A
Sbjct: 343 QLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSA 402
Query: 239 MISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYA 298
MI G ING E F M I P+ +TF +LSA +H GL+ E + + M+ +
Sbjct: 403 MIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHN 462
Query: 299 IEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAE--- 355
+E HYG MVD+LGRAGRL+EAY+LIK MPM+PN V GA+L A H++++ E
Sbjct: 463 LEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIAC 522
Query: 356 -QVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
+KL T SH L+ IY++ +W+ A +R + + + K GC
Sbjct: 523 SHCVKL--ETDPTGYLSH---LAMIYSSVGRWDDARTVRDSIKEKKLCKTLGC 570
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 158/354 (44%), Gaps = 42/354 (11%)
Query: 70 VVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPV 129
V T +V Y+R G +E A++ F+ + E+N W+S++ GY + G + EA +F +IP
Sbjct: 139 VYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPE 198
Query: 130 RSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV-VSVLSACAQLGL----LD 184
+ WN +I+ Y + G A F M + P + + + C ++ L D
Sbjct: 199 KDAVSWNLIISSYAKKGDMGNACSLFSAMPLK--SPASWNILIGGYVNCREMKLARTYFD 256
Query: 185 AGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFA 244
A Q N ++ Y K GD+ +A +F ++++ ++AMI+ +
Sbjct: 257 AMPQ-----------KNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYT 305
Query: 245 INGKCREVLEFFGRM--ENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMG 302
NGK ++ L+ F +M N I+PD IT +V+SA + G S V E+Y E G
Sbjct: 306 QNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWV----ESYITEHG 361
Query: 303 IK----HYGCMVDLLGRAGRLKEAY----DLIKRMPMEPNETVLGAMLGACRTHSDMKMA 354
IK ++DL + G +A+ +L K+ + + ++G + T ++
Sbjct: 362 IKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFT 421
Query: 355 EQVIKLIGTNSIT-----RADSHNVLLSNIYAA-----SEKWEKAEKMRGIMVD 398
+ K I N +T A SH+ L+ Y E + GIMVD
Sbjct: 422 AMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVD 475
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 4/160 (2%)
Query: 135 WNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIE 194
W ++ Q+ + + + +M G P V SVL AC ++ + GK IH
Sbjct: 72 WGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQAL 131
Query: 195 HKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLE 254
L +V +GLV +Y++ G + A+ F+ ++N WN+++ G+ +G+ E
Sbjct: 132 KNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARR 191
Query: 255 FFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM 294
F ++ DA+++ ++S+ A G + A + S M
Sbjct: 192 VFDKIP----EKDAVSWNLIISSYAKKGDMGNACSLFSAM 227
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 274 bits (701), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 152/419 (36%), Positives = 237/419 (56%), Gaps = 15/419 (3%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
MP+R+VV+WN +IS Y+ NG E A VF+ M ++ + + + G +A +
Sbjct: 107 MPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDE--GTIVSTLSACSALKNL 164
Query: 61 DEAPHELKGVVT--------WTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYC 112
+ + VVT +VD + + G ++ AR VF+ M ++N W+SMV GY
Sbjct: 165 EIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYV 224
Query: 113 KKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVS 172
G + EA +F R PV+ + +W M+ GYVQ + AL+ F M+ G PD F +VS
Sbjct: 225 STGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVS 284
Query: 173 VLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRN 232
+L+ CAQ G L+ GK IH I R+TV+ V + LVDMYAKCG + A VF +R+
Sbjct: 285 LLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERD 344
Query: 233 ICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVIS 292
W ++I G A+NG L+ + MEN+ +R DAITF+ VL+AC HGG ++E ++
Sbjct: 345 TASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFH 404
Query: 293 KM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNET---VLGAMLGACRTH 348
M E + ++ +H C++DLL RAG L EA +LI +M E +ET V ++L A R +
Sbjct: 405 SMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNY 464
Query: 349 SDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
++K+AE+V + + ++ + +H LL+++YA++ +WE +R M D K GC
Sbjct: 465 GNVKIAERVAEKLEKVEVSDSSAHT-LLASVYASANRWEDVTNVRRKMKDLGIRKFPGC 522
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 110/247 (44%), Gaps = 54/247 (21%)
Query: 77 VDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWN 136
V GYA K +E + +V +S++ Y G + +F +P R + WN
Sbjct: 68 VHGYAVKAGLEF-----------DSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWN 116
Query: 137 TMIAGYVQNGFGERALQAFEEMRAEG-FEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEH 195
+I+ YV NG E A+ F+ M E + DE T+VS LSAC+ L L+ G++I+
Sbjct: 117 GLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIY----- 171
Query: 196 KRLTVNPFVLS-----GLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKC- 249
R V F +S LVDM+ KCG L AR VF+ +N+ CW +M+ G+ G+
Sbjct: 172 -RFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRID 230
Query: 250 ------------------------------REVLEFFGRMENLNIRPDAITFLTVLSACA 279
E LE F M+ IRPD +++L+ CA
Sbjct: 231 EARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCA 290
Query: 280 HGGLLSE 286
G L +
Sbjct: 291 QTGALEQ 297
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 2/200 (1%)
Query: 131 SLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIH 190
SL ++N M+ + L F E+R +G PD FT+ VL + +L + G+++H
Sbjct: 10 SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVH 69
Query: 191 HMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCR 250
L + +V + L+ MYA G + VF+ QR++ WN +IS + NG+
Sbjct: 70 GYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFE 129
Query: 251 EVLEFFGRM-ENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCM 309
+ + F RM + N++ D T ++ LSAC+ L E E I + EM ++ +
Sbjct: 130 DAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNL-EIGERIYRFVVTEFEMSVRIGNAL 188
Query: 310 VDLLGRAGRLKEAYDLIKRM 329
VD+ + G L +A + M
Sbjct: 189 VDMFCKCGCLDKARAVFDSM 208
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 152/408 (37%), Positives = 235/408 (57%), Gaps = 18/408 (4%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMI-----GGFARNGDTAT 55
M R+VVTWN MI Y R G ++ A +FEEM + V +MI R G+
Sbjct: 172 MSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKD-SNVMPDEMILCNIVSACGRTGNMRY 230
Query: 56 ARRLFDEAPHELKGVVT--WTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCK 113
R +++ + T T +V YA G M+ ARE F M RN FV ++MVSGY K
Sbjct: 231 NRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSK 290
Query: 114 KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSV 173
G + +A+ IF + + L W TMI+ YV++ + + AL+ FEEM G +PD ++ SV
Sbjct: 291 CGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSV 350
Query: 174 LSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNI 233
+SACA LG+LD K +H I L + + L++MYAKCG L R VFE +RN+
Sbjct: 351 ISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNV 410
Query: 234 CCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISK 293
W++MI+ +++G+ + L F RM+ N+ P+ +TF+ VL C+H GL+ E ++ +
Sbjct: 411 VSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFAS 470
Query: 294 M-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMK 352
M + Y I ++HYGCMVDL GRA L+EA ++I+ MP+ N + G+++ ACR H +++
Sbjct: 471 MTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELE 530
Query: 353 M----AEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIM 396
+ A+++++L + D VL+SNIYA ++WE +R +M
Sbjct: 531 LGKFAAKRILELEPDH-----DGALVLMSNIYAREQRWEDVRNIRRVM 573
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 142/315 (45%), Gaps = 38/315 (12%)
Query: 67 LKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGR 126
LK V + + +G ME F++ + FV + + Y G + A +F
Sbjct: 118 LKAVSKVSALFEG------MELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDE 171
Query: 127 IPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAG 186
+ R + WNTMI Y + G + A + FEEM+ PDE + +++SAC + G +
Sbjct: 172 MSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYN 231
Query: 187 KQIHHMIEHKRLTVNPFVLSGLVDMYA-------------------------------KC 215
+ I+ + + ++ +L+ LV MYA KC
Sbjct: 232 RAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKC 291
Query: 216 GDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVL 275
G L +A+++F+ ++++ CW MIS + + +E L F M I+PD ++ +V+
Sbjct: 292 GRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVI 351
Query: 276 SACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNE 335
SACA+ G+L +A V S + +E + ++++ + G L D+ ++MP N
Sbjct: 352 SACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRR-NV 410
Query: 336 TVLGAMLGACRTHSD 350
+M+ A H +
Sbjct: 411 VSWSSMINALSMHGE 425
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 96/211 (45%), Gaps = 1/211 (0%)
Query: 120 AETIFGRIPVRSLEI-WNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACA 178
A +F IP I +N + ++ + ++ +R G D+F+ + +L A +
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 179 QLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNA 238
++ L G ++H + +PFV +G +DMYA CG + AR VF+ + R++ WN
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 239 MISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYA 298
MI + G E + F M++ N+ PD + ++SAC G + + +
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242
Query: 299 IEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM 329
+ M +V + AG + A + ++M
Sbjct: 243 VRMDTHLLTALVTMYAGAGCMDMAREFFRKM 273
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 272 bits (696), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 228/402 (56%), Gaps = 18/402 (4%)
Query: 6 VVTWNAMISGYMRNGDMESASLVFEEMP----GKTGVTWSQMIGGFARNGDTATARRLFD 61
V+W + I+ RNG + A+ F +M +T+ ++ G GD +
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGC---GDFTSGSEALG 92
Query: 62 EAPH--------ELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCK 113
+ H + V+ T ++ Y+++G + AR VF+ M ++N W++M+ GY +
Sbjct: 93 DLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMR 152
Query: 114 KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSV 173
G V A +F ++P R L W MI G+V+ G+ E AL F EM+ G +PD +++
Sbjct: 153 SGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAA 212
Query: 174 LSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNI 233
L+AC LG L G +H + + N V + L+D+Y +CG + AR VF +R +
Sbjct: 213 LNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTV 272
Query: 234 CCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISK 293
WN++I GFA NG E L +F +M+ +PDA+TF L+AC+H GL+ E L
Sbjct: 273 VSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQI 332
Query: 294 MEA-YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTH-SDM 351
M+ Y I I+HYGC+VDL RAGRL++A L++ MPM+PNE V+G++L AC H +++
Sbjct: 333 MKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNI 392
Query: 352 KMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMR 393
+AE+++K + T+ ++ S+ V+LSN+YAA KWE A KMR
Sbjct: 393 VLAERLMKHL-TDLNVKSHSNYVILSNMYAADGKWEGASKMR 433
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 119/228 (52%), Gaps = 7/228 (3%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
M ++N VTWN MI GYMR+G +++A+ +F++MP + ++W+ MI GF + G A F
Sbjct: 135 MEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWF 194
Query: 61 DE------APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKK 114
E P + + + A + R V + N V +S++ YC+
Sbjct: 195 REMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRC 254
Query: 115 GSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVL 174
G V A +F + R++ WN++I G+ NG +L F +M+ +GF+PD T L
Sbjct: 255 GCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGAL 314
Query: 175 SACAQLGLLDAGKQIHHMIE-HKRLTVNPFVLSGLVDMYAKCGDLVNA 221
+AC+ +GL++ G + +++ R++ LVD+Y++ G L +A
Sbjct: 315 TACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDA 362
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 269 bits (688), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 142/407 (34%), Positives = 242/407 (59%), Gaps = 6/407 (1%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
NV + AMI G++ +G ++ M + + + +I + D R + +
Sbjct: 91 NVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHAQVL 150
Query: 65 HELKGVVTWTV---MVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAE 121
+L + +V M++ Y + GE+ A+++F+ MP+R+ + M++ Y + G + EA
Sbjct: 151 -KLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEAL 209
Query: 122 TIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLG 181
+F + ++ W MI G V+N +AL+ F EM+ E +EFT V VLSAC+ LG
Sbjct: 210 ELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLG 269
Query: 182 LLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMIS 241
L+ G+ +H +E++R+ ++ FV + L++MY++CGD+ AR VF +++ +N MIS
Sbjct: 270 ALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMIS 329
Query: 242 GFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKME-AYAIE 300
G A++G E + F M N RP+ +T + +L+AC+HGGLL LEV + M+ + +E
Sbjct: 330 GLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVE 389
Query: 301 MGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKL 360
I+HYGC+VDLLGR GRL+EAY I+ +P+EP+ +LG +L AC+ H +M++ E++ K
Sbjct: 390 PQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKR 449
Query: 361 IGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
+ + + ++ VLLSN+YA+S KW+++ ++R M D EK GC
Sbjct: 450 LFESENPDSGTY-VLLSNLYASSGKWKESTEIRESMRDSGIEKEPGC 495
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 159/338 (47%), Gaps = 46/338 (13%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
MP+R+ V MI+ Y G ++ A +F+++ K V W+ MI G RN + A LF
Sbjct: 184 MPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELF 243
Query: 61 DEAPHELKGVVTWTV--MVDGYARKGEMEAAREVFELMP----ERNCFVWSSMVSGYCKK 114
E E +T ++ + G +E R V + E + FV +++++ Y +
Sbjct: 244 REMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRC 303
Query: 115 GSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVL 174
G + EA +F + + + +NTMI+G +G A+ F +M GF P++ T+V++L
Sbjct: 304 GDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALL 363
Query: 175 SACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNIC 234
+AC+ GLLD G ++ + + KR+ F + ++ Y DL+
Sbjct: 364 NACSHGGLLDIGLEVFNSM--KRV----FNVEPQIEHYGCIVDLL--------------- 402
Query: 235 CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA-HGGLLSEALEVISK 293
G+ + E + +EN+ I PD I T+LSAC HG + E E I+K
Sbjct: 403 ------------GRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNM--ELGEKIAK 448
Query: 294 --MEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM 329
E+ + G Y + +L +G+ KE+ ++ + M
Sbjct: 449 RLFESENPDSGT--YVLLSNLYASSGKWKESTEIRESM 484
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 113/270 (41%), Gaps = 35/270 (12%)
Query: 91 EVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGER 150
++ +++ FV ++ SV A +F + ++ ++ MI G+V +G
Sbjct: 51 KIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSAD 110
Query: 151 ALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVD 210
+ + M PD + + SVL AC L ++IH + + V +++
Sbjct: 111 GVSLYHRMIHNSVLPDNYVITSVLKACD----LKVCREIHAQVLKLGFGSSRSVGLKMME 166
Query: 211 MYAKCGDLVNARLVFE--------------------GFTQ-----------RNICCWNAM 239
+Y K G+LVNA+ +F+ GF + ++ CW AM
Sbjct: 167 IYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAM 226
Query: 240 ISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAI 299
I G N + + LE F M+ N+ + T + VLSAC+ G L V S +E +
Sbjct: 227 IDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRM 286
Query: 300 EMGIKHYGCMVDLLGRAGRLKEAYDLIKRM 329
E+ ++++ R G + EA + + M
Sbjct: 287 ELSNFVGNALINMYSRCGDINEARRVFRVM 316
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 169 TVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF 228
T++SVL +C + + + IH I + FV+ L+ + + + A VF
Sbjct: 31 TLISVLRSCKNIAHVPS---IHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 87
Query: 229 TQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEAL 288
+ N+ + AMI GF +G+ + + + RM + ++ PD +VL AC L
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC--------DL 139
Query: 289 EVISKMEAYAIEMGI---KHYGC-MVDLLGRAGRLKEAYDLIKRMP 330
+V ++ A +++G + G M+++ G++G L A + MP
Sbjct: 140 KVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMP 185
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 269 bits (687), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 136/327 (41%), Positives = 212/327 (64%), Gaps = 6/327 (1%)
Query: 74 TVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLE 133
T +VD YA+ G++ +A++VF+ MPER+ ++M++ Y K+G+V A +F + R +
Sbjct: 165 TGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIV 224
Query: 134 IWNTMIAGYVQNGFGERALQAFEEMRAEGF-EPDEFTVVSVLSACAQLGLLDAGKQIHHM 192
WN MI GY Q+GF AL F+++ AEG +PDE TVV+ LSAC+Q+G L+ G+ IH
Sbjct: 225 SWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVF 284
Query: 193 IEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREV 252
++ R+ +N V +GL+DMY+KCG L A LVF +++I WNAMI+G+A++G ++
Sbjct: 285 VKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDA 344
Query: 253 LEFFGRMENLN-IRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYAIEMGIKHYGCMV 310
L F M+ + ++P ITF+ L ACAH GL++E + + M + Y I+ I+HYGC+V
Sbjct: 345 LRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLV 404
Query: 311 DLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIK-LIGTNSITRA 369
LLGRAG+LK AY+ IK M M+ + + ++LG+C+ H D + +++ + LIG N +
Sbjct: 405 SLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLN--IKN 462
Query: 370 DSHNVLLSNIYAASEKWEKAEKMRGIM 396
VLLSNIYA+ +E K+R +M
Sbjct: 463 SGIYVLLSNIYASVGDYEGVAKVRNLM 489
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 142/289 (49%), Gaps = 24/289 (8%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
MPER++V+ AMI+ Y + G++E+A +F+ M + V+W+ MI G+A++G A LF
Sbjct: 187 MPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLF 246
Query: 61 DEAPHELKGV---VTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCK 113
+ E K +T + ++ G +E R + + N V + ++ Y K
Sbjct: 247 QKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSK 306
Query: 114 KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRA-EGFEPDEFTVVS 172
GS+ EA +F P + + WN MIAGY +G+ + AL+ F EM+ G +P + T +
Sbjct: 307 CGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIG 366
Query: 173 VLSACAQLGLLDAGKQIHHMIEHKRLTVNPFV--LSGLVDMYAKCGDLVNARLVFEGFTQ 230
L ACA GL++ G +I + + + P + LV + + G L A +E
Sbjct: 367 TLQACAHAGLVNEGIRIFESMG-QEYGIKPKIEHYGCLVSLLGRAGQLKRA---YETIKN 422
Query: 231 RNI----CCWNAMISGFAINGKC---REVLEFFGRMENLNIRPDAITFL 272
N+ W++++ ++G +E+ E+ + LNI+ I L
Sbjct: 423 MNMDADSVLWSSVLGSCKLHGDFVLGKEIAEY---LIGLNIKNSGIYVL 468
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 113/253 (44%), Gaps = 36/253 (14%)
Query: 110 GYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFT 169
Y G + + +F + L ++ I NG ++A + ++ + P+EFT
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 170 VVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVN--------- 220
S+L +C+ +GK IH + L ++P+V +GLVD+YAK GD+V+
Sbjct: 133 FSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMP 188
Query: 221 ----------------------ARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGR 258
AR +F+ +R+I WN MI G+A +G + L F +
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 259 -MENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAG 317
+ +PD IT + LSAC+ G L + +++ I + +K ++D+ + G
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCG 308
Query: 318 RLKEAYDLIKRMP 330
L+EA + P
Sbjct: 309 SLEEAVLVFNDTP 321
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 267 bits (683), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 151/443 (34%), Positives = 237/443 (53%), Gaps = 42/443 (9%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
+V N++I Y GD++SA VF + K V+W+ MI GF + G A LF +
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 65 HE--------LKGVVTW-----------------------------TVMVDGYARKGEME 87
E + GV++ M+D Y + G +E
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 284
Query: 88 AAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGF 147
A+ +F+ M E++ W++M+ GY A + +P + + WN +I+ Y QNG
Sbjct: 285 DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGK 344
Query: 148 GERALQAFEEMRAE-GFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLS 206
AL F E++ + + ++ T+VS LSACAQ+G L+ G+ IH I+ + +N V S
Sbjct: 345 PNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTS 404
Query: 207 GLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRP 266
L+ MY+KCGDL +R VF +R++ W+AMI G A++G E ++ F +M+ N++P
Sbjct: 405 ALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKP 464
Query: 267 DAITFLTVLSACAHGGLLSEALEVISKMEA-YAIEMGIKHYGCMVDLLGRAGRLKEAYDL 325
+ +TF V AC+H GL+ EA + +ME+ Y I KHY C+VD+LGR+G L++A
Sbjct: 465 NGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKF 524
Query: 326 IKRMPMEPNETVLGAMLGACRTHSDMKMAEQV-IKLIGTNSITRADSHNVLLSNIYAASE 384
I+ MP+ P+ +V GA+LGAC+ H+++ +AE +L+ R D +VLLSNIYA
Sbjct: 525 IEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELE--PRNDGAHVLLSNIYAKLG 582
Query: 385 KWEKAEKMRGIMVDGESEKIAGC 407
KWE ++R M +K GC
Sbjct: 583 KWENVSELRKHMRVTGLKKEPGC 605
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 170/368 (46%), Gaps = 40/368 (10%)
Query: 20 GDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELK---GVVTWTVM 76
+E A VF+E+P W+ +I +A D + F + E + T+ +
Sbjct: 78 ASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFL 137
Query: 77 VDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSL 132
+ A + + + + + + FV +S++ Y G + A +F I + +
Sbjct: 138 IKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDV 197
Query: 133 EIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHM 192
WN+MI G+VQ G ++AL+ F++M +E + T+V VLSACA++ L+ G+Q+
Sbjct: 198 VSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSY 257
Query: 193 IEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEG------------------------- 227
IE R+ VN + + ++DMY KCG + +A+ +F+
Sbjct: 258 IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAA 317
Query: 228 ------FTQRNICCWNAMISGFAINGKCREVLEFFGRME-NLNIRPDAITFLTVLSACAH 280
Q++I WNA+IS + NGK E L F ++ N++ + IT ++ LSACA
Sbjct: 318 REVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQ 377
Query: 281 GGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGA 340
G L + S ++ + I M ++ + + G L+++ ++ + + + V A
Sbjct: 378 VGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSA 436
Query: 341 MLGACRTH 348
M+G H
Sbjct: 437 MIGGLAMH 444
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 125/257 (48%), Gaps = 7/257 (2%)
Query: 115 GSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEG-FEPDEFTVVSV 173
S+ A +F IP + WNT+I Y ++ AF +M +E P+++T +
Sbjct: 78 ASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFL 137
Query: 174 LSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNI 233
+ A A++ L G+ +H M + + FV + L+ Y CGDL +A VF ++++
Sbjct: 138 IKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDV 197
Query: 234 CCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISK 293
WN+MI+GF G + LE F +ME+ +++ +T + VLSACA L +V S
Sbjct: 198 VSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSY 257
Query: 294 MEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKM 353
+E + + + M+D+ + G +++A L M + N T ML D +
Sbjct: 258 IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVT-WTTMLDGYAISEDYEA 316
Query: 354 AEQVIKLIGTNSITRAD 370
A +V+ NS+ + D
Sbjct: 317 AREVL-----NSMPQKD 328
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
M E++ VTW M+ GY + D E+A V MP K V W+ +I + +NG A +F
Sbjct: 293 MEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVF 352
Query: 61 DEAPHELK-------GVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVS 109
HEL+ +T + A+ G +E R + + + N V S+++
Sbjct: 353 ----HELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIH 408
Query: 110 GYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFT 169
Y K G + ++ +F + R + +W+ MI G +G G A+ F +M+ +P+ T
Sbjct: 409 MYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVT 468
Query: 170 VVSVLSACAQLGLLDAGKQIHHMIE 194
+V AC+ GL+D + + H +E
Sbjct: 469 FTNVFCACSHTGLVDEAESLFHQME 493
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 265 bits (678), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 146/414 (35%), Positives = 236/414 (57%), Gaps = 10/414 (2%)
Query: 2 PERNVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATAR 57
P R++V+WN +I+GY + G+ E A V++ M + VT ++ + GD +
Sbjct: 218 PVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGK 277
Query: 58 RLFDEAPHE-LKGVVTW-TVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKG 115
++ L+ + ++D +++ G++ AR +F+ + +R W++M+SGY + G
Sbjct: 278 EFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCG 337
Query: 116 SVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLS 175
+ + +F + + + +WN MI G VQ G+ AL F+EM+ +PDE T++ LS
Sbjct: 338 LLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLS 397
Query: 176 ACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICC 235
AC+QLG LD G IH IE L++N + + LVDMYAKCG++ A VF G RN
Sbjct: 398 ACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLT 457
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKME 295
+ A+I G A++G + +F M + I PD ITF+ +LSAC HGG++ + S+M+
Sbjct: 458 YTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMK 517
Query: 296 A-YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMA 354
+ + + +KHY MVDLLGRAG L+EA L++ MPME + V GA+L CR H ++++
Sbjct: 518 SRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELG 577
Query: 355 EQVIKLIGTNSITRADSH-NVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
E+ K + + +DS VLL +Y + WE A++ R +M + EKI GC
Sbjct: 578 EKAAKKLL--ELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGC 629
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 170/382 (44%), Gaps = 56/382 (14%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
N+ +WN I G+ + E P ++ + + QM+ R+G + P
Sbjct: 117 NIFSWNVTIRGFSES-----------ENPKESFLLYKQML----RHG-------CCESRP 154
Query: 65 HELKGVVTWTVMVD-GYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETI 123
V + V D + G M V +L E V ++ + + G + A +
Sbjct: 155 DHFTYPVLFKVCADLRLSSLGHMILG-HVLKLRLELVSHVHNASIHMFASCGDMENARKV 213
Query: 124 FGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLL 183
F PVR L WN +I GY + G E+A+ ++ M +EG +PD+ T++ ++S+C+ LG L
Sbjct: 214 FDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDL 273
Query: 184 DAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGF 243
+ GK+ + ++ L + +++ L+DM++KCGD+ AR +F+ +R I W MISG+
Sbjct: 274 NRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGY 333
Query: 244 AING-------------------------------KCREVLEFFGRMENLNIRPDAITFL 272
A G + ++ L F M+ N +PD IT +
Sbjct: 334 ARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMI 393
Query: 273 TVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME 332
LSAC+ G L + + +E Y++ + + +VD+ + G + EA + +
Sbjct: 394 HCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR 453
Query: 333 PNETVLGAMLGACRTHSDMKMA 354
N A++G H D A
Sbjct: 454 -NSLTYTAIIGGLALHGDASTA 474
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 123/260 (47%), Gaps = 18/260 (6%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
+ +R +V+W MISGY R G ++ + +F++M K V W+ MIGG + A LF
Sbjct: 318 LEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALF 377
Query: 61 DE------APHELKGVVTWTVMVDGYARKGEMEAA----REVFELMPERNCFVWSSMVSG 110
E P E +T + ++ G ++ R + + N + +S+V
Sbjct: 378 QEMQTSNTKPDE----ITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDM 433
Query: 111 YCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
Y K G+++EA ++F I R+ + +I G +G A+ F EM G PDE T
Sbjct: 434 YAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITF 493
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFV--LSGLVDMYAKCGDLVNARLVFEGF 228
+ +LSAC G++ G+ ++ R +NP + S +VD+ + G L A + E
Sbjct: 494 IGLLSACCHGGMIQTGRDYFSQMK-SRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESM 552
Query: 229 T-QRNICCWNAMISGFAING 247
+ + W A++ G ++G
Sbjct: 553 PMEADAAVWGALLFGCRMHG 572
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 263 bits (673), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/442 (33%), Positives = 234/442 (52%), Gaps = 54/442 (12%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
M RN+ +WN M+SGY+++G + A +VF+ MP + V+W+ M+ G+A++G+ A +
Sbjct: 108 MHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFY 167
Query: 61 DEAPHE-------------------------------------LKGVVTWTVMVDGYARK 83
E L VV ++D YA+
Sbjct: 168 KEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKC 227
Query: 84 GEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYV 143
G+ME+A+ F+ M ++ +W++++SGY K G + AE +F +P ++ W +IAGYV
Sbjct: 228 GQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYV 287
Query: 144 QNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPF 203
+ G G RAL F +M A G +P++FT S L A A + L GK+IH + + N
Sbjct: 288 RQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAI 347
Query: 204 VLSGLVDMYAKCGDLVNARLVFEGFTQRNICC-WNAMISGFAINGKCREVLEFFGRMENL 262
V+S L+DMY+K G L + VF ++ C WN MIS A +G + L M
Sbjct: 348 VISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKF 407
Query: 263 NIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGI----KHYGCMVDLLGRAGR 318
++P+ T + +L+AC+H GL+ E L E+ ++ GI +HY C++DLLGRAG
Sbjct: 408 RVQPNRTTLVVILNACSHSGLVEEGLRW---FESMTVQHGIVPDQEHYACLIDLLGRAGC 464
Query: 319 LKEAYDLIKRMPMEPNETVLGAMLGACRTHSD----MKMAEQVIKLIGTNSITRADSHNV 374
KE I+ MP EP++ + A+LG CR H + K A+++IKL +S + +
Sbjct: 465 FKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESS-----APYI 519
Query: 375 LLSNIYAASEKWEKAEKMRGIM 396
LLS+IYA KWE EK+RG+M
Sbjct: 520 LLSSIYADHGKWELVEKLRGVM 541
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 148/321 (46%), Gaps = 37/321 (11%)
Query: 76 MVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIW 135
++ Y + G+ A +VF+ M RN + W++MVSGY K G + A +F +P R + W
Sbjct: 88 LIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSW 147
Query: 136 NTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEH 195
NTM+ GY Q+G AL ++E R G + +EF+ +L+AC + L +Q H +
Sbjct: 148 NTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLV 207
Query: 196 KRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFA----------- 244
N + ++D YAKCG + +A+ F+ T ++I W +ISG+A
Sbjct: 208 AGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKL 267
Query: 245 ---------------INGKCRE-----VLEFFGRMENLNIRPDAITFLTVLSACAHGGLL 284
I G R+ L+ F +M L ++P+ TF + L A A L
Sbjct: 268 FCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASL 327
Query: 285 SEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNE-----TVLG 339
E+ M + ++D+ ++G L EA + + R+ + ++ T++
Sbjct: 328 RHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSL-EASERVFRICDDKHDCVFWNTMIS 386
Query: 340 AMLGACRTHSDMKMAEQVIKL 360
A+ H ++M + +IK
Sbjct: 387 ALAQHGLGHKALRMLDDMIKF 407
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 262 bits (669), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 145/406 (35%), Positives = 228/406 (56%), Gaps = 9/406 (2%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHE--L 67
N ++ Y + GD++SA VF EM ++ V+++ MI G+AR G A +LF+E E
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 68 KGVVTWTVMVDGYARKGEMEAAREVFELMPERN----CFVWSSMVSGYCKKGSVAEAETI 123
V T T +++ AR ++ + V E + E + FV ++++ Y K GS+ EAE +
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454
Query: 124 FGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEG-FEPDEFTVVSVLSACAQLGL 182
F + V+ + WNT+I GY +N + AL F + E F PDE TV VL ACA L
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 514
Query: 183 LDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISG 242
D G++IH I + V + LVDMYAKCG L+ A ++F+ +++ W MI+G
Sbjct: 515 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAG 574
Query: 243 FAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYAIEM 301
+ ++G +E + F +M I D I+F+++L AC+H GL+ E + M IE
Sbjct: 575 YGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP 634
Query: 302 GIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLI 361
++HY C+VD+L R G L +AY I+ MP+ P+ T+ GA+L CR H D+K+AE+V + +
Sbjct: 635 TVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKV 694
Query: 362 GTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
+ VL++NIYA +EKWE+ +++R + K GC
Sbjct: 695 FELE-PENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGC 739
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 167/338 (49%), Gaps = 22/338 (6%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
ERN V N++++ Y++N ++SA VF+EM + ++W+ +I G+ NG +F +
Sbjct: 228 ERNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQ 286
Query: 63 APHELKGV----VTWTVMVDGYARKGEMEAAREVFELMPERNCF-----VWSSMVSGYCK 113
+ G+ T + G A + R V + + CF ++++ Y K
Sbjct: 287 ML--VSGIEIDLATIVSVFAGCADSRLISLGRAVHSI-GVKACFSREDRFCNTLLDMYSK 343
Query: 114 KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSV 173
G + A+ +F + RS+ + +MIAGY + G A++ FEEM EG PD +TV +V
Sbjct: 344 CGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAV 403
Query: 174 LSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNI 233
L+ CA+ LLD GK++H I+ L + FV + L+DMYAKCG + A LVF ++I
Sbjct: 404 LNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDI 463
Query: 234 CCWNAMISGFAINGKCREVLEFFG-RMENLNIRPDAITFLTVLSACAHGGLLSEALEVIS 292
WN +I G++ N E L F +E PD T VL ACA + E+
Sbjct: 464 ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREI-- 521
Query: 293 KMEAYAIEMGI---KHYG-CMVDLLGRAGRLKEAYDLI 326
Y + G +H +VD+ + G L A+ L
Sbjct: 522 --HGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLF 557
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 156/316 (49%), Gaps = 12/316 (3%)
Query: 16 YMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKGV----V 71
Y GD++ AS VF+E+ + + W+ ++ A++GD + + LF + GV
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMS--SGVEMDSY 196
Query: 72 TWTVMVDGYARKGEMEAAREVFELM-----PERNCFVWSSMVSGYCKKGSVAEAETIFGR 126
T++ + ++ + ++ + ERN V +S+V+ Y K V A +F
Sbjct: 197 TFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNS-VGNSLVAFYLKNQRVDSARKVFDE 255
Query: 127 IPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAG 186
+ R + WN++I GYV NG E+ L F +M G E D T+VSV + CA L+ G
Sbjct: 256 MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG 315
Query: 187 KQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAIN 246
+ +H + + + L+DMY+KCGDL +A+ VF + R++ + +MI+G+A
Sbjct: 316 RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYARE 375
Query: 247 GKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHY 306
G E ++ F ME I PD T VL+ CA LL E V ++ + I
Sbjct: 376 GLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS 435
Query: 307 GCMVDLLGRAGRLKEA 322
++D+ + G ++EA
Sbjct: 436 NALMDMYAKCGSMQEA 451
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%)
Query: 111 YCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
Y G + EA +F + + WN ++ ++G ++ F++M + G E D +T
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ 230
V + + L + G+Q+H I V + LV Y K + +AR VF+ T+
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE 258
Query: 231 RNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEV 290
R++ WN++I+G+ NG + L F +M I D T ++V + CA L+S V
Sbjct: 259 RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAV 318
Query: 291 ISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMP 330
S + ++D+ + G L A + + M
Sbjct: 319 HSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS 358
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 7/158 (4%)
Query: 130 RSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQI 189
RS+ NT + + ++G E A++ + ++ D T+ SVL CA L GK++
Sbjct: 59 RSVTDANTQLRRFCESGNLENAVKLL--CVSGKWDIDPRTLCSVLQLCADSKSLKDGKEV 116
Query: 190 HHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKC 249
+ I ++ + S L MY CGDL A VF+ WN +++ A +G
Sbjct: 117 DNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDF 176
Query: 250 REVLEFFGRMENLNIRPDAITFLTVLSACA-----HGG 282
+ F +M + + D+ TF V + + HGG
Sbjct: 177 SGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGG 214
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 261 bits (668), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 138/407 (33%), Positives = 228/407 (56%), Gaps = 7/407 (1%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
+++VV + + Y + D+ SA VF EMP + V+W+ ++ + ++G+ A+ +FD
Sbjct: 142 DKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDL 201
Query: 63 APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAET 122
P G +W +VDG + G++ A+++F+ MP+R+ ++SM+ GY K G + A
Sbjct: 202 MPERNLG--SWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARD 259
Query: 123 IFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGL 182
+F + W+ +I GY QNG A + F EM A+ +PDEF +V ++SAC+Q+G
Sbjct: 260 LFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGC 319
Query: 183 LDAGKQIHHMIEHKRLT--VNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMI 240
+ +++ + H+R+ + +V+ L+DM AKCG + A +FE QR++ + +M+
Sbjct: 320 FELCEKVDSYL-HQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMM 378
Query: 241 SGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYAI 299
G AI+G E + F +M + I PD + F +L C L+ E L M + Y+I
Sbjct: 379 EGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSI 438
Query: 300 EMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIK 359
HY C+V+LL R G+LKEAY+LIK MP E + + G++LG C H + ++AE V +
Sbjct: 439 LASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVAR 498
Query: 360 LIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
+ A S+ VLLSNIYAA ++W +R M + KI G
Sbjct: 499 HLFELEPQSAGSY-VLLSNIYAALDRWTDVAHLRDKMNENGITKICG 544
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 144/302 (47%), Gaps = 49/302 (16%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
MPERN+ +WNA++ G +++GD+ +A +F+EMP + ++++ MI G+A+ GD +AR LF
Sbjct: 202 MPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLF 261
Query: 61 DEAPHELKG--VVTWTVMVDGYARKGEMEAAREVFELMPERN------------------ 100
+EA +G V W+ ++ GYA+ G+ A +VF M +N
Sbjct: 262 EEA----RGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQM 317
Query: 101 -CFVWSSMVSGY---------------------CKKGSVAEAETIFGRIPVRSLEIWNTM 138
CF V Y K G + A +F +P R L + +M
Sbjct: 318 GCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSM 377
Query: 139 IAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHK-R 197
+ G +G G A++ FE+M EG PDE +L C Q L++ G + ++ K
Sbjct: 378 MEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYS 437
Query: 198 LTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT-QRNICCWNAMISGFAINGKCREVLEFF 256
+ +P S +V++ ++ G L A + + + + W +++ G +++G E+ E
Sbjct: 438 ILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNT-EIAEVV 496
Query: 257 GR 258
R
Sbjct: 497 AR 498
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 127/303 (41%), Gaps = 38/303 (12%)
Query: 123 IFGRIPVRSLEIWNTMIAGYVQNG-FGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLG 181
+F R+P +WN +I GY F E MR PDE+T V+ C+ G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 182 LLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMIS 241
+ G +H ++ + V + VD Y KC DL +AR VF +RN W A++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 242 GFAINGKCREVLEFFGRMENLNI---------------------------RPDAITFLTV 274
+ +G+ E F M N+ + D I++ ++
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSM 244
Query: 275 LSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM---PM 331
+ A GG + A ++ EA ++ ++ + ++ + G+ EA+ + M +
Sbjct: 245 IDGYAKGGDMVSARDLFE--EARGVD--VRAWSALILGYAQNGQPNEAFKVFSEMCAKNV 300
Query: 332 EPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVL--LSNIYAASEKWEKA 389
+P+E ++ ++ AC ++ E+V + + + SH V+ L ++ A ++A
Sbjct: 301 KPDEFIMVGLMSACSQMGCFELCEKVDSYL-HQRMNKFSSHYVVPALIDMNAKCGHMDRA 359
Query: 390 EKM 392
K+
Sbjct: 360 AKL 362
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 261 bits (667), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 153/424 (36%), Positives = 240/424 (56%), Gaps = 28/424 (6%)
Query: 2 PERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFD 61
P R+VV++ A+I GY G +E+A +F+E+P K V+W+ MI G+A G+ A LF
Sbjct: 196 PHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255
Query: 62 EA------PHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGY 111
+ P E T +V A+ G +E R+V + + N + ++++ Y
Sbjct: 256 DMMKTNVRPDE----STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLY 311
Query: 112 CKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVV 171
K G + A +F R+P + + WNT+I GY + AL F+EM G P++ T++
Sbjct: 312 SKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTML 371
Query: 172 SVLSACAQLGLLDAGKQIHHMIEHKRL---TVNPFVLSGLVDMYAKCGDLVNARLVFEGF 228
S+L ACA LG +D G+ IH I+ KRL T + + L+DMYAKCGD+ A VF
Sbjct: 372 SILPACAHLGAIDIGRWIHVYID-KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 430
Query: 229 TQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEAL 288
+++ WNAMI GFA++G+ + F RM + I+PD ITF+ +LSAC+H G+L
Sbjct: 431 LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGR 490
Query: 289 EVISKM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRT 347
+ M + Y + ++HYGCM+DLLG +G KEA ++I M MEP+ + ++L AC+
Sbjct: 491 HIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKM 550
Query: 348 HSDMKM----AEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEK 403
H ++++ AE +IK+ N + VLLSNIYA++ +W + K R ++ D +K
Sbjct: 551 HGNVELGESFAENLIKIEPENPGSY-----VLLSNIYASAGRWNEVAKTRALLNDKGMKK 605
Query: 404 IAGC 407
+ GC
Sbjct: 606 VPGC 609
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 185/394 (46%), Gaps = 49/394 (12%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPG----KTGVTWSQMIGGFARNGDTATARR 58
E N++ WN M G+ + D SA ++ M T+ ++ A++ ++
Sbjct: 96 EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 59 LFDEAPHELK-----GVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCK 113
+ H LK + T ++ Y + G +E A +VF+ P R+ +++++ GY
Sbjct: 156 IHG---HVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYAS 212
Query: 114 KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSV 173
+G + A+ +F IPV+ + WN MI+GY + G + AL+ F++M PDE T+V+V
Sbjct: 213 RGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTV 272
Query: 174 LSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNI 233
+SACAQ G ++ G+Q+H I+ N +++ L+D+Y+KCG+L A +FE +++
Sbjct: 273 VSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDV 332
Query: 234 CCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLS-------- 285
WN +I G+ +E L F M P+ +T L++L ACAH G +
Sbjct: 333 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVY 392
Query: 286 -----EALEVISKMEAYAIEM--------------------GIKHYGCMVDLLGRAGRLK 320
+ + S + I+M + + M+ GR
Sbjct: 393 IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRAD 452
Query: 321 EAYDLIKRMP---MEPNETVLGAMLGACRTHSDM 351
++DL RM ++P++ +L AC +HS M
Sbjct: 453 ASFDLFSRMRKIGIQPDDITFVGLLSAC-SHSGM 485
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 118/278 (42%), Gaps = 62/278 (22%)
Query: 86 MEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQN 145
+ A VF+ + E N +W++M G+ PV +L+++ MI
Sbjct: 84 LPYAISVFKTIQEPNLLIWNTMFRGHALSSD-----------PVSALKLYVCMI------ 126
Query: 146 GFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVL 205
+ G P+ +T VL +CA+ G+QIH + ++ +V
Sbjct: 127 --------------SLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVH 172
Query: 206 SGLVDMYAKCGDLVNARLVFE---------------GFTQR----------------NIC 234
+ L+ MY + G L +A VF+ G+ R ++
Sbjct: 173 TSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVV 232
Query: 235 CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM 294
WNAMISG+A G +E LE F M N+RPD T +TV+SACA G + +V +
Sbjct: 233 SWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWI 292
Query: 295 EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME 332
+ + +K ++DL + G L+ A L +R+P +
Sbjct: 293 DDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK 330
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 260 bits (664), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 150/409 (36%), Positives = 225/409 (55%), Gaps = 17/409 (4%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKG 69
N++ISGY +G + AS +F+ K VTW+ MI GF RNG + A F E
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVA 201
Query: 70 VVTWTVM--VDGYARKGEMEAAREVFELMPER-----NCFVWSSMVSGYCKKGSVAEAET 122
TV+ + + ++ R V L E + F+ SS+V Y K +A+
Sbjct: 202 ANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQK 261
Query: 123 IFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGL 182
+F +P R++ W +IAGYVQ+ ++ + FEEM P+E T+ SVLSACA +G
Sbjct: 262 VFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGA 321
Query: 183 LDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISG 242
L G+++H + + +N + L+D+Y KCG L A LVFE ++N+ W AMI+G
Sbjct: 322 LHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMING 381
Query: 243 FAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA-YAIEM 301
FA +G R+ + F M + ++ P+ +TF+ VLSACAHGGL+ E + M+ + +E
Sbjct: 382 FAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEP 441
Query: 302 GIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKM----AEQV 357
HY CMVDL GR G L+EA LI+RMPMEP V GA+ G+C H D ++ A +V
Sbjct: 442 KADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRV 501
Query: 358 IKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
IKL ++S LL+N+Y+ S+ W++ ++R M D + K G
Sbjct: 502 IKLQPSHS-----GRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPG 545
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 129/253 (50%), Gaps = 4/253 (1%)
Query: 98 ERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEE 157
+ + FV +S++SGY G A +F + + W MI G+V+NG A+ F E
Sbjct: 135 DSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVE 194
Query: 158 MRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHM-IEHKRLTVNPFVLSGLVDMYAKCG 216
M+ G +E TVVSVL A ++ + G+ +H + +E R+ + F+ S LVDMY KC
Sbjct: 195 MKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCS 254
Query: 217 DLVNARLVFEGFTQRNICCWNAMISGFAINGKCREV-LEFFGRMENLNIRPDAITFLTVL 275
+A+ VF+ RN+ W A+I+G+ + +C + + F M ++ P+ T +VL
Sbjct: 255 CYDDAQKVFDEMPSRNVVTWTALIAGY-VQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVL 313
Query: 276 SACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNE 335
SACAH G L V M +IE+ ++DL + G L+EA + +R+ E N
Sbjct: 314 SACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERL-HEKNV 372
Query: 336 TVLGAMLGACRTH 348
AM+ H
Sbjct: 373 YTWTAMINGFAAH 385
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 116/238 (48%), Gaps = 48/238 (20%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGV-----TWSQMIGGFARNGDTAT 55
MP RNVVTW A+I+GY+++ + LVFEEM K+ V T S ++ A G
Sbjct: 266 MPSRNVVTWTALIAGYVQSRCFDKGMLVFEEML-KSDVAPNEKTLSSVLSACAHVGALHR 324
Query: 56 ARRLFDEAPHELKGVV-----TWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSG 110
RR+ + +K + T ++D Y + G +E A VFE + E+N + W++M++G
Sbjct: 325 GRRV---HCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMING 381
Query: 111 YCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
+ G +A +++ TM++ +V P+E T
Sbjct: 382 FAAHGYARDA-----------FDLFYTMLSSHVS--------------------PNEVTF 410
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFV--LSGLVDMYAKCGDLVNARLVFE 226
++VLSACA GL++ G+++ ++ R + P + +VD++ + G L A+ + E
Sbjct: 411 MAVLSACAHGGLVEEGRRLFLSMK-GRFNMEPKADHYACMVDLFGRKGLLEEAKALIE 467
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 5/161 (3%)
Query: 120 AETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQ--AFEEMRAEGFEPDEFTVVSVLSAC 177
A + ++ S+++W+++I + R L A+ MR G P T +L A
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAV 114
Query: 178 AQLGLLDAGK-QIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
+L D+ Q H I L +PFV + L+ Y+ G A +F+G +++ W
Sbjct: 115 FKLR--DSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTW 172
Query: 237 NAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSA 277
AMI GF NG E + +F M+ + + +T ++VL A
Sbjct: 173 TAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKA 213
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 259 bits (661), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 134/369 (36%), Positives = 213/369 (57%), Gaps = 12/369 (3%)
Query: 41 SQMIGGFARNGDTATARRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERN 100
+ +I ++ G AR++FDE P + + WT MV Y R +M++A + M E+N
Sbjct: 908 TTLIDFYSATGRIREARKVFDEMPE--RDDIAWTTMVSAYRRVLDMDSANSLANQMSEKN 965
Query: 101 CFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRA 160
+ +++GY G++ +AE++F ++PV+ + W TMI GY QN A+ F +M
Sbjct: 966 EATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMME 1025
Query: 161 EGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVN 220
EG PDE T+ +V+SACA LG+L+ GK++H ++ ++ S LVDMY+KCG L
Sbjct: 1026 EGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLER 1085
Query: 221 ARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAH 280
A LVF ++N+ CWN++I G A +G +E L+ F +ME +++P+A+TF++V +AC H
Sbjct: 1086 ALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTH 1145
Query: 281 GGLLSEALEVISKM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLG 339
GL+ E + M + Y+I ++HYG MV L +AG + EA +LI M EPN + G
Sbjct: 1146 AGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWG 1205
Query: 340 AMLGACRTHSDMKMAEQVIKLIGTNSITRADSHN----VLLSNIYAASEKWEKAEKMRGI 395
A+L CR H ++ +AE I N + + N LL ++YA +W ++RG
Sbjct: 1206 ALLDGCRIHKNLVIAE-----IAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGR 1260
Query: 396 MVDGESEKI 404
M + EKI
Sbjct: 1261 MRELGIEKI 1269
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 135/254 (53%), Gaps = 8/254 (3%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
M E+N T N +I+GYM G++E A +F +MP K ++W+ MI G+++N A +F
Sbjct: 961 MSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVF 1020
Query: 61 DEAPHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKK 114
+ E + VT + ++ A G +E +EV + + ++ S++V Y K
Sbjct: 1021 YKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKC 1080
Query: 115 GSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVL 174
GS+ A +F +P ++L WN++I G +GF + AL+ F +M E +P+ T VSV
Sbjct: 1081 GSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVF 1140
Query: 175 SACAQLGLLDAGKQIHH-MIEHKRLTVNPFVLSGLVDMYAKCGDLVNA-RLVFEGFTQRN 232
+AC GL+D G++I+ MI+ + N G+V +++K G + A L+ + N
Sbjct: 1141 TACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPN 1200
Query: 233 ICCWNAMISGFAIN 246
W A++ G I+
Sbjct: 1201 AVIWGALLDGCRIH 1214
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 258 bits (660), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 138/411 (33%), Positives = 232/411 (56%), Gaps = 17/411 (4%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMP----GKTGVTWSQMIGGFARNGDTATA 56
+P+ + +N MISGY+++G ++ L+ + M G T S ++ G T
Sbjct: 95 LPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMIL 154
Query: 57 RRLFDEAPH--------ELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMV 108
R H EL V+ T +VD Y + G++E+AR VFE M + N +SM+
Sbjct: 155 PRSLCRLVHARIIKCDVELDDVLI-TALVDTYVKSGKLESARTVFETMKDENVVCCTSMI 213
Query: 109 SGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNG-FGERALQAFEEMRAEGFEPDE 167
SGY +G V +AE IF V+ + ++N M+ G+ ++G +R++ + M+ GF P+
Sbjct: 214 SGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNI 273
Query: 168 FTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEG 227
T SV+ AC+ L + G+Q+H I + + + S L+DMYAKCG + +AR VF+
Sbjct: 274 STFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQ 333
Query: 228 FTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEA 287
++N+ W +MI G+ NG E LE F RM+ I P+ +TFL LSAC+H GL+ +
Sbjct: 334 MQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKG 393
Query: 288 LEVISKME-AYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACR 346
E+ M+ Y+++ ++HY C+VDL+GRAG L +A++ + MP P+ + A+L +C
Sbjct: 394 YEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCN 453
Query: 347 THSDMKMAE-QVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIM 396
H ++++A +L N+ R ++ + LSN+YA+++KW+ K+R +M
Sbjct: 454 LHGNVELASIAASELFKLNADKRPGAY-LALSNVYASNDKWDNVSKIREVM 503
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 5/153 (3%)
Query: 185 AGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFA 244
AGK+IH I + + L+ ++ KCG L AR VF+ + + +N MISG+
Sbjct: 52 AGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYL 111
Query: 245 INGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGG---LLSEAL--EVISKMEAYAI 299
+G +E+L RM + D T VL A G +L +L V +++ +
Sbjct: 112 KHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDV 171
Query: 300 EMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME 332
E+ +VD ++G+L+ A + + M E
Sbjct: 172 ELDDVLITALVDTYVKSGKLESARTVFETMKDE 204
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 258 bits (658), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 148/396 (37%), Positives = 224/396 (56%), Gaps = 18/396 (4%)
Query: 20 GDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKGVVTWTVMVDG 79
G + SA+ VF EM K V W+ MI G+ N D +ARR FD +P + +V W M+ G
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPE--RDIVLWNTMISG 99
Query: 80 YARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMI 139
Y G M AR +F+ MP R+ W++++ GY G + E +F +P R++ WN +I
Sbjct: 100 YIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLI 159
Query: 140 AGYVQNGFGERALQAFEEMRAEG-FEPDEFTVVSVLSACAQLGLLDAGKQIHHMIE---H 195
GY QNG L +F+ M EG P++ T+ VLSACA+LG D GK +H E +
Sbjct: 160 KGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGY 219
Query: 196 KRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEF 255
++ VN V + L+DMY KCG + A VF+G +R++ WN MI+G A +G E L
Sbjct: 220 NKVDVN--VKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNL 277
Query: 256 FGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYAIEMGIKHYGCMVDLLG 314
F M+N I PD +TF+ VL AC H GL+ + L + M ++I I+H GC+VDLL
Sbjct: 278 FHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLS 337
Query: 315 RAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMA----EQVIKLIGTNSITRAD 370
RAG L +A + I +MP++ + + +LGA + + + + E++IKL N
Sbjct: 338 RAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNP----- 392
Query: 371 SHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
++ V+LSNIY + +++ A +++ M D +K AG
Sbjct: 393 ANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAG 428
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 106/226 (46%), Gaps = 43/226 (19%)
Query: 2 PERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFD 61
PER++V WN MISGY+ G+M A +F++MP + ++W+ ++ G+A GD R+FD
Sbjct: 86 PERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFD 145
Query: 62 EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFV------------------ 103
+ P + V +W ++ GYA+ G + F+ M + V
Sbjct: 146 DMPE--RNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGA 203
Query: 104 -----W------------------SSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIA 140
W ++++ Y K G++ A +F I R L WNTMI
Sbjct: 204 FDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMIN 263
Query: 141 GYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAG 186
G +G G AL F EM+ G PD+ T V VL AC +GL++ G
Sbjct: 264 GLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDG 309
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 108/223 (48%), Gaps = 20/223 (8%)
Query: 112 CKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVV 171
C G +A A +F + +++ +W +MI GY+ N A + F+ P+ V+
Sbjct: 39 CLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFD------LSPERDIVL 92
Query: 172 --SVLSACAQLG-LLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF 228
+++S ++G +L+A M ++ N VL G YA GD+ VF+
Sbjct: 93 WNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNT-VLEG----YANIGDMEACERVFDDM 147
Query: 229 TQRNICCWNAMISGFAINGKCREVLEFFGRM-ENLNIRPDAITFLTVLSACAHGGLLSEA 287
+RN+ WN +I G+A NG+ EVL F RM + ++ P+ T VLSACA G
Sbjct: 148 PERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFG 207
Query: 288 LEVISKMEAYA---IEMGIKHYGCMVDLLGRAGRLKEAYDLIK 327
V E +++ +K+ ++D+ G+ G ++ A ++ K
Sbjct: 208 KWVHKYGETLGYNKVDVNVKN--ALIDMYGKCGAIEIAMEVFK 248
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 257 bits (657), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 134/340 (39%), Positives = 209/340 (61%), Gaps = 12/340 (3%)
Query: 74 TVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLE 133
T ++ YA+ G + AR VF+ M +R+ VW++M++GY ++G + A +F +P +++
Sbjct: 121 TTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVT 180
Query: 134 IWNTMIAGYVQNGFGERALQAFEEM-RAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHM 192
W T+I+G+ QNG AL+ F M + + +P+ TVVSVL ACA LG L+ G+++
Sbjct: 181 SWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGY 240
Query: 193 IEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF-TQRNICCWNAMISGFAINGKCRE 251
N +V + ++MY+KCG + A+ +FE QRN+C WN+MI A +GK E
Sbjct: 241 ARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDE 300
Query: 252 VLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKME-AYAIEMGIKHYGCMV 310
L F +M +PDA+TF+ +L AC HGG++ + E+ ME + I ++HYGCM+
Sbjct: 301 ALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMI 360
Query: 311 DLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRAD 370
DLLGR G+L+EAYDLIK MPM+P+ V G +LGAC H ++++AE I + ++ + +
Sbjct: 361 DLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAE-----IASEALFKLE 415
Query: 371 SHN----VLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
N V++SNIYAA+EKW+ +MR +M K AG
Sbjct: 416 PTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAG 455
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 142/292 (48%), Gaps = 45/292 (15%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
M +R+V WNAMI+GY R GDM++A +F+ MP K +W+ +I GF++NG+ + A ++F
Sbjct: 143 MSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMF 202
Query: 61 --DEAPHELK-GVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCK 113
E +K +T ++ A GE+E R + E N +V ++ + Y K
Sbjct: 203 LCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSK 262
Query: 114 KGSVAEAETIFGRI-PVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVS 172
G + A+ +F + R+L WN+MI +G + AL F +M EG +PD T V
Sbjct: 263 CGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVG 322
Query: 173 VLSACAQLGLLDAGKQIHHMIE--HKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ 230
+L AC G++ G+++ +E HK +S ++ Y DL+
Sbjct: 323 LLLACVHGGMVVKGQELFKSMEEVHK--------ISPKLEHYGCMIDLL----------- 363
Query: 231 RNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGG 282
G+ ++ E + ++ + ++PDA+ + T+L AC+ G
Sbjct: 364 ----------------GRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHG 399
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 107/251 (42%), Gaps = 40/251 (15%)
Query: 134 IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMI 193
++N +I Y + ++ + + +G P T + +A A + +H
Sbjct: 49 LYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQF 108
Query: 194 EHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAM-------------- 239
+ F + L+ YAK G L AR VF+ ++R++ WNAM
Sbjct: 109 FRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAM 168
Query: 240 -----------------ISGFAINGKCREVLEFFGRME-NLNIRPDAITFLTVLSACAHG 281
ISGF+ NG E L+ F ME + +++P+ IT ++VL ACA+
Sbjct: 169 ELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANL 228
Query: 282 GLLSEALEVISKMEAYAIEMGI--KHYGC--MVDLLGRAGRLKEAYDLIKRMPMEPNETV 337
G LE+ ++E YA E G Y C +++ + G + A L + + + N
Sbjct: 229 G----ELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCS 284
Query: 338 LGAMLGACRTH 348
+M+G+ TH
Sbjct: 285 WNSMIGSLATH 295
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 144/420 (34%), Positives = 234/420 (55%), Gaps = 32/420 (7%)
Query: 6 VVTWNAMISGYMRNGDMESASLVFEEMPGKTG---------------VTWSQMIGGFARN 50
V +N +I GY + G +E+A +F+++P G V+W+ MI + +
Sbjct: 235 VYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKV 294
Query: 51 GDTATARRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSG 110
GD +AR LFD+ + ++W M+DGY ME A +F MP R+ W+ MVSG
Sbjct: 295 GDVVSARLLFDQMKD--RDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSG 352
Query: 111 YCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
Y G+V A F + P + WN++IA Y +N + A+ F M EG +PD T+
Sbjct: 353 YASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTL 412
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT- 229
S+LSA L L G Q+H ++ + P V + L+ MY++CG+++ +R +F+
Sbjct: 413 TSLLSASTGLVNLRLGMQMHQIVVKTVIPDVP-VHNALITMYSRCGEIMESRRIFDEMKL 471
Query: 230 QRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEA-L 288
+R + WNAMI G+A +G E L FG M++ I P ITF++VL+ACAH GL+ EA
Sbjct: 472 KREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKA 531
Query: 289 EVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTH 348
+ +S M Y IE ++HY +V++ G+ +EA +I MP EP++TV GA+L ACR +
Sbjct: 532 QFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIY 591
Query: 349 SDMKMAEQVIKLIGTNSITRADSHN----VLLSNIYAASEKWEKAEKMRGIMVDGESEKI 404
+++ +A + +++R + + VLL N+YA W++A ++R ++ ES++I
Sbjct: 592 NNVGLAH-----VAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVR---MNMESKRI 643
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 184/393 (46%), Gaps = 29/393 (7%)
Query: 4 RNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDT---ATARRLF 60
RN VTWN MISGY++ +M A +F+ MP + VTW+ MI G+ G AR+LF
Sbjct: 69 RNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLF 128
Query: 61 DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEA 120
DE P + +W M+ GYA+ + A +FE MPERN WS+M++G+C+ G V A
Sbjct: 129 DEMPS--RDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSA 186
Query: 121 ETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRA--EGFEPDEFTVVSVLSACA 178
+F ++PV+ ++AG ++N A + + G E + +++
Sbjct: 187 VVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYG 246
Query: 179 QLGLLDAGKQIHHMI------EH-----KRLTVNPFVLSGLVDMYAKCGDLVNARLVFEG 227
Q G ++A + + I +H +R N + ++ Y K GD+V+ARL+F+
Sbjct: 247 QRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQ 306
Query: 228 FTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEA 287
R+ WN MI G+ + + F M N DA ++ ++S A G + A
Sbjct: 307 MKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPN----RDAHSWNMMVSGYASVGNVELA 362
Query: 288 LEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME---PNETVLGAMLGA 344
K E + ++ + KEA DL RM +E P+ L ++L A
Sbjct: 363 RHYFEKTP----EKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSA 418
Query: 345 CRTHSDMKMAEQVIKLIGTNSITRADSHNVLLS 377
++++ Q+ +++ I HN L++
Sbjct: 419 STGLVNLRLGMQMHQIVVKTVIPDVPVHNALIT 451
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 171/416 (41%), Gaps = 99/416 (23%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
MP R+ +WN MISGY +N + A L+FE+MP + V+WS MI GF +NG+ +A LF
Sbjct: 131 MPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLF 190
Query: 61 DEAPHELKG-----------------------------------VVTWTVMVDGYARKGE 85
+ P + V + ++ GY ++G+
Sbjct: 191 RKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQ 250
Query: 86 MEAAREVFELMPE---------------RNCFVWSSMVSGYCKKGSVAEAETIFGRIPVR 130
+EAAR +F+ +P+ +N W+SM+ Y K G V A +F ++ R
Sbjct: 251 VEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR 310
Query: 131 SLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIH 190
WNTMI GYV E A F EM + H
Sbjct: 311 DTISWNTMIDGYVHVSRMEDAFALFSEM--------------------------PNRDAH 344
Query: 191 HMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCR 250
+ +V YA G++ AR FE +++ WN++I+ + N +
Sbjct: 345 S-------------WNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYK 391
Query: 251 EVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKH---YG 307
E ++ F RM +PD T ++LSA GL++ L + +M ++ I +
Sbjct: 392 EAVDLFIRMNIEGEKPDPHTLTSLLSAST--GLVN--LRLGMQMHQIVVKTVIPDVPVHN 447
Query: 308 CMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGT 363
++ + R G + E+ + M ++ AM+G H + A + + L G+
Sbjct: 448 ALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGN---ASEALNLFGS 500
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 137/360 (38%), Positives = 213/360 (59%), Gaps = 7/360 (1%)
Query: 41 SQMIGGFARNGDTATARRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERN 100
+ +IG + G AR++FDE H+ +V W ++ R ++ ARE+F+ M RN
Sbjct: 145 TTLIGMYGGCGCVEFARKVFDEM-HQ-PNLVAWNAVITACFRGNDVAGAREIFDKMLVRN 202
Query: 101 CFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRA 160
W+ M++GY K G + A+ IF +P R W+TMI G NG + F E++
Sbjct: 203 HTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQR 262
Query: 161 EGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVN 220
G P+E ++ VLSAC+Q G + GK +H +E + V + L+DMY++CG++
Sbjct: 263 AGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPM 322
Query: 221 ARLVFEGFTQ-RNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA 279
ARLVFEG + R I W +MI+G A++G+ E + F M + PD I+F+++L AC+
Sbjct: 323 ARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACS 382
Query: 280 HGGLLSEALEVISKME-AYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVL 338
H GL+ E + S+M+ Y IE I+HYGCMVDL GR+G+L++AYD I +MP+ P V
Sbjct: 383 HAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVW 442
Query: 339 GAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHN-VLLSNIYAASEKWEKAEKMRGIMV 397
+LGAC +H ++++AEQV + + N + +S + VLLSN YA + KW+ +R M+
Sbjct: 443 RTLLGACSSHGNIELAEQVKQRL--NELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMI 500
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 167/378 (44%), Gaps = 88/378 (23%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
M + N+V WNA+I+ R D+ A +F++M + +W+ M+ G+ + G+ +A+R+F
Sbjct: 167 MHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIF 226
Query: 61 DEAPHELKGVVTWTVMVDGYARKGEMEAA----REV------------------------ 92
E PH + V+W+ M+ G A G + RE+
Sbjct: 227 SEMPH--RDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGS 284
Query: 93 FEL------MPERNCFVW-----SSMVSGYCKKGSVAEAETIF-GRIPVRSLEIWNTMIA 140
FE E+ + W ++++ Y + G+V A +F G R + W +MIA
Sbjct: 285 FEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIA 344
Query: 141 GYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLT- 199
G +G GE A++ F EM A G PD + +S+L AC+ GL++ G+ + E KR+
Sbjct: 345 GLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGED--YFSEMKRVYH 402
Query: 200 VNPFV--LSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFG 257
+ P + +VD+Y + +GK ++ +F
Sbjct: 403 IEPEIEHYGCMVDLYGR-------------------------------SGKLQKAYDFIC 431
Query: 258 RMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDL---LG 314
+M I P AI + T+L AC+ G + A +V ++ E+ + G +V L
Sbjct: 432 QMP---IPPTAIVWRTLLGACSSHGNIELAEQVKQRLN----ELDPNNSGDLVLLSNAYA 484
Query: 315 RAGRLKEAYDLIKRMPME 332
AG+ K+ + K M ++
Sbjct: 485 TAGKWKDVASIRKSMIVQ 502
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 222/398 (55%), Gaps = 18/398 (4%)
Query: 22 MESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF------DEAPHELKGVVTWTV 75
+E A V +EMP K V+W+ MI +++ G ++ A +F D P+E T+
Sbjct: 103 LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEF----TFAT 158
Query: 76 MVDGYARKGEMEAAREVFELMPERN----CFVWSSMVSGYCKKGSVAEAETIFGRIPVRS 131
++ R + +++ L+ + N FV SS++ Y K G + EA IF +P R
Sbjct: 159 VLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERD 218
Query: 132 LEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHH 191
+ +IAGY Q G E AL+ F + +EG P+ T S+L+A + L LLD GKQ H
Sbjct: 219 VVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHC 278
Query: 192 MIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCRE 251
+ + L + + L+DMY+KCG+L AR +F+ +R WNAM+ G++ +G RE
Sbjct: 279 HVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGRE 338
Query: 252 VLEFFGRMEN-LNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA--YAIEMGIKHYGC 308
VLE F M + ++PDA+T L VLS C+HG + L + M A Y + G +HYGC
Sbjct: 339 VLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGC 398
Query: 309 MVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITR 368
+VD+LGRAGR+ EA++ IKRMP +P VLG++LGACR H + + E V + +
Sbjct: 399 IVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPEN 458
Query: 369 ADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
A ++ V+LSN+YA++ +W +R +M+ K G
Sbjct: 459 AGNY-VILSNLYASAGRWADVNNVRAMMMQKAVTKEPG 495
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 130/274 (47%), Gaps = 1/274 (0%)
Query: 102 FVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAE 161
++ + ++ Y K + +A + +P +++ W MI+ Y Q G AL F EM
Sbjct: 88 YLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRS 147
Query: 162 GFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA 221
+P+EFT +VL++C + L GKQIH +I + FV S L+DMYAK G + A
Sbjct: 148 DGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEA 207
Query: 222 RLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHG 281
R +FE +R++ A+I+G+A G E LE F R+ + + P+ +T+ ++L+A +
Sbjct: 208 REIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGL 267
Query: 282 GLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAM 341
LL + + + ++D+ + G L A L MP E AM
Sbjct: 268 ALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMP-ERTAISWNAM 326
Query: 342 LGACRTHSDMKMAEQVIKLIGTNSITRADSHNVL 375
L H + ++ +L+ + D+ +L
Sbjct: 327 LVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLL 360
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 5/193 (2%)
Query: 139 IAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIH-HMIEHKR 197
I+ NG R +A EM G E ++L+AC L G+++H HMI+ +
Sbjct: 27 ISQLCSNG---RLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRY 83
Query: 198 LTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFG 257
L ++ + L+ Y KC L +AR V + ++N+ W AMIS ++ G E L F
Sbjct: 84 LPAT-YLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFA 142
Query: 258 RMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAG 317
M + +P+ TF TVL++C L ++ + + + I ++D+ +AG
Sbjct: 143 EMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAG 202
Query: 318 RLKEAYDLIKRMP 330
++KEA ++ + +P
Sbjct: 203 QIKEAREIFECLP 215
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 154/446 (34%), Positives = 228/446 (51%), Gaps = 57/446 (12%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPG-------------------------- 34
+PERNV+ N MI Y+ NG VF M G
Sbjct: 100 IPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIG 159
Query: 35 --------KTGVTWSQMIGG-----FARNGDTATARRLFDEAPHELKGVVTWTVMVDGYA 81
K G++ + +G + + G + AR + DE + VV+W +V GYA
Sbjct: 160 RKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSR--RDVVSWNSLVVGYA 217
Query: 82 RKGE----MEAAREVFELMPERNCFVWSSMVSGYCKKGS--VAEAETIFGRIPVRSLEIW 135
+ +E RE+ + + +S++ + V + +F ++ +SL W
Sbjct: 218 QNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSW 277
Query: 136 NTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEH 195
N MI Y++N A++ + M A+GFEPD ++ SVL AC L GK+IH IE
Sbjct: 278 NVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIER 337
Query: 196 KRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEF 255
K+L N + + L+DMYAKCG L AR VFE R++ W AMIS + +G+ + +
Sbjct: 338 KKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVAL 397
Query: 256 FGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYAIEMGIKHYGCMVDLLG 314
F ++++ + PD+I F+T L+AC+H GLL E M + Y I ++H CMVDLLG
Sbjct: 398 FSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLG 457
Query: 315 RAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKM----AEQVIKLIGTNSITRAD 370
RAG++KEAY I+ M MEPNE V GA+LGACR HSD + A+++ +L S
Sbjct: 458 RAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQS----- 512
Query: 371 SHNVLLSNIYAASEKWEKAEKMRGIM 396
+ VLLSNIYA + +WE+ +R IM
Sbjct: 513 GYYVLLSNIYAKAGRWEEVTNIRNIM 538
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 139/290 (47%), Gaps = 13/290 (4%)
Query: 107 MVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
++ Y VA A +F IP R++ I N MI YV NGF ++ F M PD
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 167 EFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFE 226
+T VL AC+ G + G++IH L+ FV +GLV MY KCG L ARLV +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 227 GFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSE 286
++R++ WN+++ G+A N + + LE ME++ I DA T ++L A ++ +E
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTT--TE 257
Query: 287 ALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMP---MEPNETVLGAMLG 343
+ + M + + + M+ + + EA +L RM EP+ + ++L
Sbjct: 258 NVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLP 317
Query: 344 ACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSN----IYAASEKWEKA 389
AC S + + +++ I + N+LL N +YA EKA
Sbjct: 318 ACGDTSALSLGKKIHGYIERKKLI----PNLLLENALIDMYAKCGCLEKA 363
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 187 KQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAIN 246
+ +H I + L N + L+ YA D+ +AR VF+ +RN+ N MI + N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 247 GKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHY 306
G E ++ FG M N+RPD TF VL AC+ G + + K+ A ++G+
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSG----TIVIGRKIHGSATKVGLSST 174
Query: 307 ----GCMVDLLGRAGRLKEAYDLIKRM 329
+V + G+ G L EA ++ M
Sbjct: 175 LFVGNGLVSMYGKCGFLSEARLVLDEM 201
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 131/349 (37%), Positives = 208/349 (59%), Gaps = 7/349 (2%)
Query: 43 MIGGFARNGDTATARRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCF 102
++ + R+G AR++ D P ++ V+W ++ Y KG ++ AR +F+ M ERN
Sbjct: 181 LVNVYGRSGYFEIARKVLDRMP--VRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVE 238
Query: 103 VWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEG 162
W+ M+SGY G V EA+ +F +PVR + WN M+ Y G L+ F +M +
Sbjct: 239 SWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDS 298
Query: 163 FE-PDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA 221
E PD FT+VSVLSACA LG L G+ +H I+ + + F+ + LVDMY+KCG + A
Sbjct: 299 TEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKA 358
Query: 222 RLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHG 281
VF ++R++ WN++IS +++G ++ LE F M +P+ ITF+ VLSAC H
Sbjct: 359 LEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHV 418
Query: 282 GLLSEALEVISKMEA-YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGA 340
G+L +A ++ M + Y +E I+HYGCMVDLLGR G+++EA +L+ +P + +L +
Sbjct: 419 GMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLES 478
Query: 341 MLGACRTHSDMKMAEQVI-KLIGTNSITRADSHNVLLSNIYAASEKWEK 388
+LGAC+ ++ AE++ +L+ N R S +SN+YA+ +WEK
Sbjct: 479 LLGACKRFGQLEQAERIANRLLELN--LRDSSGYAQMSNLYASDGRWEK 525
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 111/233 (47%), Gaps = 42/233 (18%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
MP R+ V+WN+++S Y+ G ++ A +F+EM + +W+ MI G+A G A+ +F
Sbjct: 201 MPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVF 260
Query: 61 DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNC------------------- 101
D P ++ VV+W MV YA G EVF M + +
Sbjct: 261 DSMP--VRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLG 318
Query: 102 ---------------------FVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIA 140
F+ +++V Y K G + +A +F R + WN++I+
Sbjct: 319 SLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIIS 378
Query: 141 GYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMI 193
+G G+ AL+ F EM EGF+P+ T + VLSAC +G+LD +++ M+
Sbjct: 379 DLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMM 431
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 120/278 (43%), Gaps = 12/278 (4%)
Query: 116 SVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLS 175
+V+ A +I RI + N++I Y + E AL F EM PD+++ VL
Sbjct: 89 TVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLK 148
Query: 176 ACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICC 235
ACA + G+QIH + L + FV + LV++Y + G AR V + R+
Sbjct: 149 ACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVS 208
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKME 295
WN+++S + G E F ME N+ ++ F+ +S A GL+ EA EV M
Sbjct: 209 WNSLLSAYLEKGLVDEARALFDEMEERNV--ESWNFM--ISGYAAAGLVKEAKEVFDSMP 264
Query: 296 AYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM----PMEPNETVLGAMLGACRTHSDM 351
+ + MV G E ++ +M +P+ L ++L AC + +
Sbjct: 265 V----RDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSL 320
Query: 352 KMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKA 389
E V I + I L ++Y+ K +KA
Sbjct: 321 SQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKA 358
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 144/417 (34%), Positives = 226/417 (54%), Gaps = 22/417 (5%)
Query: 4 RNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEA 63
+V +++S Y +G + A +F+E+P ++ VTW+ + G+ +G A LF
Sbjct: 144 HDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLF--- 200
Query: 64 PHELKGVVTWTVMVDGY---------ARKGEMEAAREVFELMPE----RNCFVWSSMVSG 110
K +V V D Y G++++ + + M E +N FV +++V+
Sbjct: 201 ----KKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNL 256
Query: 111 YCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
Y K G + +A ++F + + + W+TMI GY N F + ++ F +M E +PD+F++
Sbjct: 257 YAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSI 316
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ 230
V LS+CA LG LD G+ +I+ N F+ + L+DMYAKCG + VF+ +
Sbjct: 317 VGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKE 376
Query: 231 RNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEV 290
++I NA ISG A NG + FG+ E L I PD TFL +L C H GL+ + L
Sbjct: 377 KDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRF 436
Query: 291 ISKME-AYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHS 349
+ + YA++ ++HYGCMVDL GRAG L +AY LI MPM PN V GA+L CR
Sbjct: 437 FNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVK 496
Query: 350 DMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
D ++AE V+K + A ++ V LSNIY+ +W++A ++R +M +KI G
Sbjct: 497 DTQLAETVLKELIALEPWNAGNY-VQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPG 552
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 99/207 (47%)
Query: 123 IFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGL 182
+F ++ ++N++I G+V N L F +R G FT VL AC +
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 183 LDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISG 242
G +H ++ + ++ L+ +Y+ G L +A +F+ R++ W A+ SG
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 243 FAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMG 302
+ +G+ RE ++ F +M + ++PD+ + VLSAC H G L ++ ME ++
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKN 246
Query: 303 IKHYGCMVDLLGRAGRLKEAYDLIKRM 329
+V+L + G++++A + M
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSM 273
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 113/250 (45%), Gaps = 12/250 (4%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
++N +++ Y + G ME A VF+ M K VTWS MI G+A N LF +
Sbjct: 244 QKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQ 303
Query: 63 APHELKGVVTWTVM--VDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKGS 116
E ++++ + A G ++ L+ N F+ ++++ Y K G+
Sbjct: 304 MLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGA 363
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+A +F + + + I N I+G +NG + + F + G PD T + +L
Sbjct: 364 MARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCG 423
Query: 177 CAQLGLLDAGKQIHHMIE---HKRLTVNPFVLSGLVDMYAKCGDLVNA-RLVFEGFTQRN 232
C GL+ G + + I + TV + +VD++ + G L +A RL+ + + N
Sbjct: 424 CVHAGLIQDGLRFFNAISCVYALKRTVEHY--GCMVDLWGRAGMLDDAYRLICDMPMRPN 481
Query: 233 ICCWNAMISG 242
W A++SG
Sbjct: 482 AIVWGALLSG 491
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 138/411 (33%), Positives = 230/411 (55%), Gaps = 10/411 (2%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEM----PGKTGVTWSQMI---GGFARNGDTATAR 57
+ WN MI G+ + + E + L+++ M T+ ++ + +T
Sbjct: 79 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138
Query: 58 RLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSV 117
+ +E V +++ YA G + A +F+ +PE + W+S++ GY K G +
Sbjct: 139 AQITKLGYE-NDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKM 197
Query: 118 AEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSAC 177
A T+F ++ ++ W TMI+GYVQ + ALQ F EM+ EPD ++ + LSAC
Sbjct: 198 DIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSAC 257
Query: 178 AQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWN 237
AQLG L+ GK IH + R+ ++ + L+DMYAKCG++ A VF+ ++++ W
Sbjct: 258 AQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWT 317
Query: 238 AMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKME-A 296
A+ISG+A +G RE + F M+ + I+P+ ITF VL+AC++ GL+ E + ME
Sbjct: 318 ALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERD 377
Query: 297 YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQ 356
Y ++ I+HYGC+VDLLGRAG L EA I+ MP++PN + GA+L ACR H ++++ E+
Sbjct: 378 YNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEE 437
Query: 357 VIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
+ +++ + V +NI+A +KW+KA + R +M + K+ GC
Sbjct: 438 IGEILIAIDPYHGGRY-VHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGC 487
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 130/259 (50%), Gaps = 18/259 (6%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
+PE + V+WN++I GY++ G M+ A +F +M K ++W+ MI G+ + A +LF
Sbjct: 176 IPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLF 235
Query: 61 DEAPHELKGV------VTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSG 110
HE++ V+ + A+ G +E + + + + + + ++
Sbjct: 236 ----HEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDM 291
Query: 111 YCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
Y K G + EA +F I +S++ W +I+GY +G G A+ F EM+ G +P+ T
Sbjct: 292 YAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITF 351
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFV--LSGLVDMYAKCGDLVNA-RLVFEG 227
+VL+AC+ GL++ GK I + +E + + P + +VD+ + G L A R + E
Sbjct: 352 TAVLTACSYTGLVEEGKLIFYSME-RDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEM 410
Query: 228 FTQRNICCWNAMISGFAIN 246
+ N W A++ I+
Sbjct: 411 PLKPNAVIWGALLKACRIH 429
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 104/242 (42%), Gaps = 33/242 (13%)
Query: 120 AETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQ 179
A+ +F +WN MI G+ + ER+L ++ M + +T S+L AC+
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 180 LGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAM 239
L + QIH I + + ++ L++ YA G+ A L+F+ + + WN++
Sbjct: 128 LSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSV 187
Query: 240 ISGFAINGKC-------------------------------REVLEFFGRMENLNIRPDA 268
I G+ GK +E L+ F M+N ++ PD
Sbjct: 188 IKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDN 247
Query: 269 ITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGC-MVDLLGRAGRLKEAYDLIK 327
++ LSACA G L + + S + I M GC ++D+ + G ++EA ++ K
Sbjct: 248 VSLANALSACAQLGALEQGKWIHSYLNKTRIRMD-SVLGCVLIDMYAKCGEMEEALEVFK 306
Query: 328 RM 329
+
Sbjct: 307 NI 308
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 86/184 (46%), Gaps = 7/184 (3%)
Query: 162 GFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVD--MYAKCGD-L 218
E + + +S L C++ L KQIH + L + + ++ + + + D L
Sbjct: 9 SLEHNLYETMSCLQRCSKQEEL---KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFL 65
Query: 219 VNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSAC 278
A++VF+GF + + WN MI GF+ + + L + RM + +A TF ++L AC
Sbjct: 66 PYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKAC 125
Query: 279 AHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVL 338
++ E ++ +++ E + +++ G K A+ L R+P EP++
Sbjct: 126 SNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIP-EPDDVSW 184
Query: 339 GAML 342
+++
Sbjct: 185 NSVI 188
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 255 bits (651), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 134/335 (40%), Positives = 207/335 (61%), Gaps = 8/335 (2%)
Query: 76 MVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIW 135
+V YA G + AA +F M R+ W+SMV+GYCK G V A +F +P R+L W
Sbjct: 158 LVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTW 217
Query: 136 NTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEH 195
+ MI GY +N E+A+ FE M+ EG +E +VSV+S+CA LG L+ G++ + +
Sbjct: 218 SIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVK 277
Query: 196 KRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEF 255
+TVN + + LVDM+ +CGD+ A VFEG + + W+++I G A++G + + +
Sbjct: 278 SHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHY 337
Query: 256 FGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA-YAIEMGIKHYGCMVDLLG 314
F +M +L P +TF VLSAC+HGGL+ + LE+ M+ + IE ++HYGC+VD+LG
Sbjct: 338 FSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLG 397
Query: 315 RAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHN- 373
RAG+L EA + I +M ++PN +LGA+LGAC+ + + ++AE+V G I H+
Sbjct: 398 RAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERV----GNMLIKVKPEHSG 453
Query: 374 --VLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
VLLSNIYA + +W+K E +R +M + +K G
Sbjct: 454 YYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPG 488
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 149/294 (50%), Gaps = 27/294 (9%)
Query: 4 RNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEA 63
R+VV+W +M++GY + G +E+A +F+EMP + TWS MI G+A+N A LF+
Sbjct: 181 RDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFM 240
Query: 64 PHELKGVV-TWTVMV---DGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKG 115
E GVV TVMV A G +E +E + + N + +++V + + G
Sbjct: 241 KRE--GVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCG 298
Query: 116 SVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLS 175
+ +A +F +P W+++I G +G +A+ F +M + GF P + T +VLS
Sbjct: 299 DIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLS 358
Query: 176 ACAQLGLLDAGKQIHHMIEHKRLTVNPFV--LSGLVDMYAKCGDLVNARLVFEGFTQRNI 233
AC+ GL++ G +I+ ++ K + P + +VDM + G L A E F +
Sbjct: 359 ACSHGGLVEKGLEIYENMK-KDHGIEPRLEHYGCIVDMLGRAGKLAEA----ENFILKMH 413
Query: 234 CCWNAMISGFAINGKCR-----EVLEFFGRMENLNIRPDAITFLTVLS---ACA 279
NA I G A+ G C+ EV E G M + ++P+ + +LS ACA
Sbjct: 414 VKPNAPILG-ALLGACKIYKNTEVAERVGNML-IKVKPEHSGYYVLLSNIYACA 465
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 132/320 (41%), Gaps = 51/320 (15%)
Query: 120 AETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQ 179
A IF +I +L ++N +I + +A + +M PD T ++ A ++
Sbjct: 70 AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSE 129
Query: 180 LGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCG---------------DLV----- 219
+ + G+Q H I + +V + LV MYA CG D+V
Sbjct: 130 MECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189
Query: 220 -----------NARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDA 268
NAR +F+ RN+ W+ MI+G+A N + ++ F M+ + +
Sbjct: 190 VAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANE 249
Query: 269 ITFLTVLSACAHGGLLSEALEVISKMEAYAIE----MGIKHYGCMVDLLGRAGRLKEAYD 324
++V+S+CAH G ALE + Y ++ + + +VD+ R G +++A
Sbjct: 250 TVMVSVISSCAHLG----ALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIH 305
Query: 325 LIKRMPMEPN---ETVLGAMLGACRTHSDMKMAEQVIKL------IGTNSITRADSHNVL 375
+ + +P + +++ + H M Q+I L + ++ A SH L
Sbjct: 306 VFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGL 365
Query: 376 LSNIYAASEKWEKAEKMRGI 395
+ E +E +K GI
Sbjct: 366 VEK---GLEIYENMKKDHGI 382
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 150/414 (36%), Positives = 231/414 (55%), Gaps = 22/414 (5%)
Query: 10 NAMISGYMRN----GDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEA-- 63
N++++ + N GDM A VF+EM W+ + G+ RN + L+ +
Sbjct: 43 NSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRD 102
Query: 64 ----PHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERN--CF--VWSSMVSGYCKKG 115
P E T+ +V ++ G+ + + + C V + +V Y K G
Sbjct: 103 LGVRPDEF----TYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFG 158
Query: 116 SVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLS 175
++ AE +F + V+ L WN +A VQ G AL+ F +M A+ + D FTVVS+LS
Sbjct: 159 ELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLS 218
Query: 176 ACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICC 235
AC QLG L+ G++I+ + + N V + +DM+ KCG+ AR++FE QRN+
Sbjct: 219 ACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVS 278
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM- 294
W+ MI G+A+NG RE L F M+N +RP+ +TFL VLSAC+H GL++E S M
Sbjct: 279 WSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMV 338
Query: 295 --EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMK 352
+E +HY CMVDLLGR+G L+EAY+ IK+MP+EP+ + GA+LGAC H DM
Sbjct: 339 QSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMI 398
Query: 353 MAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
+ ++V ++ + S++VLLSNIYAA+ KW+ +K+R M ++K+A
Sbjct: 399 LGQKVADVL-VETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAA 451
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
N++ NA + +++ G+ E+A ++FEEM + V+WS MI G+A NGD+ A LF
Sbjct: 244 NIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQ 303
Query: 65 HE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCF-------VWSSMVSGYCKKG 115
+E VT+ ++ + G + + F LM + N ++ MV + G
Sbjct: 304 NEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSG 363
Query: 116 SVAEAETIFGRIPVR-SLEIWNTMIAG 141
+ EA ++PV IW ++
Sbjct: 364 LLEEAYEFIKKMPVEPDTGIWGALLGA 390
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 7/123 (5%)
Query: 187 KQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAIN 246
K+IH ++ + +L+ L++ GD+ AR VF+ + I WN + G+ N
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 247 GKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHY 306
E L + +M +L +RPD T+ V+ A + G S + A+ ++ G +
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGF----ALHAHVVKYG---F 140
Query: 307 GCM 309
GC+
Sbjct: 141 GCL 143
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 137/366 (37%), Positives = 216/366 (59%), Gaps = 12/366 (3%)
Query: 48 ARNGDTATARRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSM 107
A GD A LFD++ K V W+ M GYA++G+++ A +F+ MP ++ W+ M
Sbjct: 158 ANCGDLGIASELFDDSAKAHK--VAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVM 215
Query: 108 VSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDE 167
++G K + A +F R + + WN MI+GYV G+ + AL F+EMR G PD
Sbjct: 216 ITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDV 275
Query: 168 FTVVSVLSACAQLGLLDAGKQIH-HMIEHKRLTVNPFV----LSGLVDMYAKCGDLVNAR 222
T++S+LSACA LG L+ GK++H +++E ++ + +V + L+DMYAKCG + A
Sbjct: 276 VTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAI 335
Query: 223 LVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGG 282
VF G R++ WN +I G A++ +E F M+ L + P+ +TF+ V+ AC+H G
Sbjct: 336 EVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSG 394
Query: 283 LLSEALEVISKM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAM 341
+ E + S M + Y IE IKHYGCMVD+LGRAG+L+EA+ ++ M +EPN V +
Sbjct: 395 RVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTL 454
Query: 342 LGACRTHSDMKMAEQVI-KLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGE 400
LGAC+ + ++++ + KL+ D VLLSNIYA++ +W+ +K+R + D
Sbjct: 455 LGACKIYGNVELGKYANEKLLSMRKDESGDY--VLLSNIYASTGQWDGVQKVRKMFDDTR 512
Query: 401 SEKIAG 406
+K G
Sbjct: 513 VKKPTG 518
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 129/289 (44%), Gaps = 45/289 (15%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
MP ++ V WN MI+G ++ +M+SA +F+ K VTW+ MI G+ G A +F
Sbjct: 204 MPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIF 263
Query: 61 DEAPH--ELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCF---------VWSSMVS 109
E E VVT ++ A G++E + + + E +W++++
Sbjct: 264 KEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALID 323
Query: 110 GYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFT 169
Y K GS+ A +F + R L WNT+I G + E +++ FEEM+ P+E T
Sbjct: 324 MYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVT 382
Query: 170 VVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT 229
+ V+ AC+ G +D G++ ++ DMY
Sbjct: 383 FIGVILACSHSGRVDEGRKYFSLMR---------------DMYN---------------I 412
Query: 230 QRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSAC 278
+ NI + M+ G+ E F +E++ I P+AI + T+L AC
Sbjct: 413 EPNIKHYGCMVDMLGRAGQLEEAFMF---VESMKIEPNAIVWRTLLGAC 458
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 121/276 (43%), Gaps = 21/276 (7%)
Query: 115 GSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVL 174
G++ A +F IP + I N ++ G Q+ E+ + + EM G PD +T VL
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 175 SACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNIC 234
AC++L G H + +N +V + L+ +A CGDL A +F+ + +
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 235 CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM 294
W++M SG+A GK E + F M D + + +++ C + A E+ +
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEMP----YKDQVAWNVMITGCLKCKEMDSARELFDRF 235
Query: 295 EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMP---MEPNETVLGAMLGACRTHSDM 351
E + + M+ G KEA + K M P+ + ++L AC D+
Sbjct: 236 ----TEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDL 291
Query: 352 KMAEQV-IKLIGTNSITRADSHNVLLSNIYAASEKW 386
+ +++ I ++ T S++ S+IY + W
Sbjct: 292 ETGKRLHIYILETASVS---------SSIYVGTPIW 318
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 147/489 (30%), Positives = 240/489 (49%), Gaps = 87/489 (17%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEM------PGK----------TGVTWSQM- 43
+P + WNA+I GY RN + A L++ M P +G++ QM
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 44 ----------------------IGGFARNGDTATARRLFDEAPHELKGVVTWTVMVDGYA 81
I +A+ +AR +F+ P + +V+WT +V YA
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 82 RKGEMEAAREVFELMPERNCFV-WSSMVSG------------------------------ 110
+ GE A E+F M + + W ++VS
Sbjct: 199 QNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD 258
Query: 111 --------YCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEG 162
Y K G VA A+ +F ++ +L +WN MI+GY +NG+ A+ F EM +
Sbjct: 259 LLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD 318
Query: 163 FEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNAR 222
PD ++ S +SACAQ+G L+ + ++ + + F+ S L+DM+AKCG + AR
Sbjct: 319 VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGAR 378
Query: 223 LVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGG 282
LVF+ R++ W+AMI G+ ++G+ RE + + ME + P+ +TFL +L AC H G
Sbjct: 379 LVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSG 438
Query: 283 LLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAML 342
++ E ++M + I +HY C++DLLGRAG L +AY++IK MP++P TV GA+L
Sbjct: 439 MVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALL 498
Query: 343 GACRTHSDMKM----AEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVD 398
AC+ H +++ A+Q+ + +N+ H V LSN+YAA+ W++ ++R M +
Sbjct: 499 SACKKHRHVELGEYAAQQLFSIDPSNT-----GHYVQLSNLYAAARLWDRVAEVRVRMKE 553
Query: 399 GESEKIAGC 407
K GC
Sbjct: 554 KGLNKDVGC 562
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 165/337 (48%), Gaps = 21/337 (6%)
Query: 20 GDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEA------------PHEL 67
GD+ A VF+++P W+ +I G++RN A ++ PH L
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 68 KGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRI 127
K + + + G A +VF L + + FV + +++ Y K + A T+F +
Sbjct: 127 KACSGLS-----HLQMGRFVHA-QVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGL 180
Query: 128 PV--RSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDA 185
P+ R++ W +++ Y QNG AL+ F +MR +PD +VSVL+A L L
Sbjct: 181 PLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQ 240
Query: 186 GKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAI 245
G+ IH + L + P +L L MYAKCG + A+++F+ N+ WNAMISG+A
Sbjct: 241 GRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK 300
Query: 246 NGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKH 305
NG RE ++ F M N ++RPD I+ + +SACA G L +A + + +
Sbjct: 301 NGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFI 360
Query: 306 YGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAML 342
++D+ + G ++ A + R ++ + V AM+
Sbjct: 361 SSALIDMFAKCGSVEGARLVFDRT-LDRDVVVWSAMI 396
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 131/274 (47%), Gaps = 4/274 (1%)
Query: 73 WTVMVDGYARKGEMEAAR-EVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRS 131
+ ++D K +++ + L + + F+ + ++ G + A +F +P
Sbjct: 24 YASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQ 83
Query: 132 LEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHH 191
+ WN +I GY +N + AL + M+ PD FT +L AC+ L L G+ +H
Sbjct: 84 IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 143
Query: 192 MIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEG--FTQRNICCWNAMISGFAINGKC 249
+ + FV +GL+ +YAKC L +AR VFEG +R I W A++S +A NG+
Sbjct: 144 QVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEP 203
Query: 250 REVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCM 309
E LE F +M ++++PD + ++VL+A L + + + + +E+ +
Sbjct: 204 MEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISL 263
Query: 310 VDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLG 343
+ + G++ A L +M PN + AM+
Sbjct: 264 NTMYAKCGQVATAKILFDKMK-SPNLILWNAMIS 296
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 5/178 (2%)
Query: 162 GFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA 221
G D F + SA + L KQIH + L + F+++ L+ + GD+ A
Sbjct: 17 GIHSDSFYASLIDSATHKAQL----KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFA 72
Query: 222 RLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHG 281
R VF+ + I WNA+I G++ N ++ L + M+ + PD+ TF +L AC+
Sbjct: 73 RQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGL 132
Query: 282 GLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLG 339
L V +++ + + ++ L + RL A + + +P+ P T++
Sbjct: 133 SHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPL-PERTIVS 189
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 251 bits (641), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 140/407 (34%), Positives = 222/407 (54%), Gaps = 11/407 (2%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATA----RRLFDEAPH 65
+A++ Y + +E A VF++MP K+ V W+ MI G+ GD+ + R+ E
Sbjct: 247 SALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTR 306
Query: 66 ELKGVVTWTVMVDGYARK---GEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAET 122
+ +T +M +R G+ V + + +V S++ Y K G AET
Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGY-VIRSVVNADIYVNCSLIDLYFKCGEANLAET 365
Query: 123 IFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGL 182
+F + E WN MI+ Y+ G +A++ +++M + G +PD T SVL AC+QL
Sbjct: 366 VFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAA 425
Query: 183 LDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISG 242
L+ GKQIH I RL + +LS L+DMY+KCG+ A +F ++++ W MIS
Sbjct: 426 LEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISA 485
Query: 243 FAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA-YAIEM 301
+ +G+ RE L F M+ ++PD +T L VLSAC H GL+ E L+ S+M + Y IE
Sbjct: 486 YGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEP 545
Query: 302 GIKHYGCMVDLLGRAGRLKEAYDLIKRMP-MEPNETVLGAMLGACRTHSDMKMAEQVIKL 360
I+HY CM+D+LGRAGRL EAY++I++ P N +L + AC H + + +++ +L
Sbjct: 546 IIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARL 605
Query: 361 IGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
+ N A ++ VL N+YA+ E W+ A ++R M + K GC
Sbjct: 606 LVENYPDDASTYMVLF-NLYASGESWDAARRVRLKMKEMGLRKKPGC 651
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 167/338 (49%), Gaps = 18/338 (5%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFD--E 62
+VV ++++ Y + E++ VF+EMP + +W+ +I F ++G+ A LF E
Sbjct: 141 DVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRME 200
Query: 63 APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNC---------FVWSSMVSGYCK 113
+ V+ TV + +R +E +E+ R C +V S++V Y K
Sbjct: 201 SSGFEPNSVSLTVAISACSRLLWLERGKEI-----HRKCVKKGFELDEYVNSALVDMYGK 255
Query: 114 KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSV 173
+ A +F ++P +SL WN+MI GYV G + ++ M EG P + T+ S+
Sbjct: 256 CDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSI 315
Query: 174 LSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNI 233
L AC++ L GK IH + + + +V L+D+Y KCG+ A VF TQ+++
Sbjct: 316 LMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSK-TQKDV 374
Query: 234 C-CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVIS 292
WN MIS + G + +E + +M ++ ++PD +TF +VL AC+ L + ++
Sbjct: 375 AESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHL 434
Query: 293 KMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMP 330
+ +E ++D+ + G KEA+ + +P
Sbjct: 435 SISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP 472
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 141/284 (49%), Gaps = 8/284 (2%)
Query: 4 RNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGV-TWSQMIGGFARNG---DTATARRL 59
R+VV ++I+ Y D SA VFE ++ V W+ ++ G+++N DT +
Sbjct: 37 RDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKR 96
Query: 60 FDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKG 115
+ T+ ++ Y G R + L+ + + V SS+V Y K
Sbjct: 97 LLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFN 156
Query: 116 SVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLS 175
+ +F +P R + WNT+I+ + Q+G E+AL+ F M + GFEP+ ++ +S
Sbjct: 157 LFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAIS 216
Query: 176 ACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICC 235
AC++L L+ GK+IH K ++ +V S LVDMY KC L AR VF+ ++++
Sbjct: 217 ACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVA 276
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA 279
WN+MI G+ G + +E RM RP T ++L AC+
Sbjct: 277 WNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACS 320
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 117/243 (48%), Gaps = 2/243 (0%)
Query: 90 REVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRS-LEIWNTMIAGYVQNGFG 148
+ + L R+ + S+++ Y A +F +RS + IWN++++GY +N
Sbjct: 28 QRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMF 87
Query: 149 ERALQAFEEM-RAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSG 207
L+ F+ + PD FT +V+ A LG G+ IH ++ + V S
Sbjct: 88 HDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASS 147
Query: 208 LVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPD 267
LV MYAK N+ VF+ +R++ WN +IS F +G+ + LE FGRME+ P+
Sbjct: 148 LVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPN 207
Query: 268 AITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIK 327
+++ +SAC+ L E+ K E+ +VD+ G+ L+ A ++ +
Sbjct: 208 SVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQ 267
Query: 328 RMP 330
+MP
Sbjct: 268 KMP 270
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 44/199 (22%)
Query: 187 KQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQR-NICCWNAMISGFAI 245
K +H I L + + L+++Y C D +AR VFE F R ++ WN+++SG++
Sbjct: 24 KLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSK 83
Query: 246 NGKCREVLEFFGRMENLNI-RPDAITFLTVLSA-----------------------C--- 278
N + LE F R+ N +I PD+ TF V+ A C
Sbjct: 84 NSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVV 143
Query: 279 ---------AHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM 329
A L +L+V +M E + + ++ ++G ++A +L RM
Sbjct: 144 VASSLVGMYAKFNLFENSLQVFDEMP----ERDVASWNTVISCFYQSGEAEKALELFGRM 199
Query: 330 P---MEPNETVLGAMLGAC 345
EPN L + AC
Sbjct: 200 ESSGFEPNSVSLTVAISAC 218
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 249 bits (635), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 140/392 (35%), Positives = 208/392 (53%), Gaps = 17/392 (4%)
Query: 12 MISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKGV- 70
IS Y + G ++ S +F E V ++ MI G+ NG+T + LF E L G
Sbjct: 262 FISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKEL--MLSGAR 319
Query: 71 VTWTVMVDGYARKGEMEAAREVFELMPERNCF----VWSSMVSGYCKKGSVAEAETIFGR 126
+ + +V G + + + N V +++ + Y K + A +F
Sbjct: 320 LRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDE 379
Query: 127 IPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAG 186
P +SL WN MI+GY QNG E A+ F EM+ F P+ T+ +LSACAQLG L G
Sbjct: 380 SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLG 439
Query: 187 KQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAIN 246
K +H ++ + +V + L+ MYAKCG + AR +F+ T++N WN MISG+ ++
Sbjct: 440 KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLH 499
Query: 247 GKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYAIEMGIKH 305
G+ +E L F M N I P +TFL VL AC+H GL+ E E+ + M Y E +KH
Sbjct: 500 GQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKH 559
Query: 306 YGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMA----EQVIKLI 361
Y CMVD+LGRAG L+ A I+ M +EP +V +LGACR H D +A E++ +L
Sbjct: 560 YACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELD 619
Query: 362 GTNSITRADSHNVLLSNIYAASEKWEKAEKMR 393
N ++VLLSNI++A + +A +R
Sbjct: 620 PDNV-----GYHVLLSNIHSADRNYPQAATVR 646
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 152/344 (44%), Gaps = 11/344 (3%)
Query: 12 MISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKGVV 71
++ Y + +E A VF+ MP K + W+ MI G+ +N + ++F + +E +
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219
Query: 72 TWTVMVDGYARKGEMEAAR---EVFELMPERNCF----VWSSMVSGYCKKGSVAEAETIF 124
T ++D E++ R ++ L + C+ V + +S Y K G + +F
Sbjct: 220 DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALF 279
Query: 125 GRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLD 184
+ +N MI GY NG E +L F+E+ G T+VS++ L L+
Sbjct: 280 REFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY 339
Query: 185 AGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFA 244
A IH + V + L +Y+K ++ +AR +F+ ++++ WNAMISG+
Sbjct: 340 A---IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYT 396
Query: 245 INGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIK 304
NG + + F M+ P+ +T +LSACA G LS V + + E I
Sbjct: 397 QNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIY 456
Query: 305 HYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTH 348
++ + + G + EA L M + NE M+ H
Sbjct: 457 VSTALIGMYAKCGSIAEARRLFDLM-TKKNEVTWNTMISGYGLH 499
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 123/250 (49%), Gaps = 16/250 (6%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHE--L 67
A+ + Y + ++ESA +F+E P K+ +W+ MI G+ +NG T A LF E
Sbjct: 358 TALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFS 417
Query: 68 KGVVTWTVMVDGYARKGEMEAAREVFELMP----ERNCFVWSSMVSGYCKKGSVAEAETI 123
VT T ++ A+ G + + V +L+ E + +V ++++ Y K GS+AEA +
Sbjct: 418 PNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRL 477
Query: 124 FGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLL 183
F + ++ WNTMI+GY +G G+ AL F EM G P T + VL AC+ GL+
Sbjct: 478 FDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLV 537
Query: 184 DAGKQIHHMIEHKRLTVNPFV--LSGLVDMYAKCGDLVNARLVFEGFT-QRNICCWNAMI 240
G +I + + H R P V + +VD+ + G L A E + + W ++
Sbjct: 538 KEGDEIFNSMIH-RYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLL 596
Query: 241 SGFAINGKCR 250
G CR
Sbjct: 597 ------GACR 600
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 136/325 (41%), Gaps = 32/325 (9%)
Query: 105 SSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEG-F 163
S++V Y K V +A +F R+P + +WNTMI+GY +N ++Q F ++ E
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 164 EPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARL 223
D T++ +L A A+L L G QIH + + +VL+G + +Y+KCG +
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 224 VFEGFTQRNICCWNAMISGFAINGKCREVLEFFGR--MENLNIRPDAITFLTVLSA---- 277
+F F + +I +NAMI G+ NG+ L F + +R + L +S
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLML 337
Query: 278 -------CAHGGLLSEA---------------LEVISKMEAYAIEMGIKHYGCMVDLLGR 315
C LS A +E K+ + E + + M+ +
Sbjct: 338 IYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQ 397
Query: 316 AGRLKEAYDLIKRMP---MEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSH 372
G ++A L + M PN + +L AC + + + V L+ + +
Sbjct: 398 NGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYV 457
Query: 373 NVLLSNIYAASEKWEKAEKMRGIMV 397
+ L +YA +A ++ +M
Sbjct: 458 STALIGMYAKCGSIAEARRLFDLMT 482
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 247 bits (630), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 139/401 (34%), Positives = 226/401 (56%), Gaps = 23/401 (5%)
Query: 22 MESASLVFEEMPGKTGV-TWSQMIGGFARNGDTATARRLFDEAPHELKGVV-----TWTV 75
M A VF ++ V W+ +I G+A G++ +A L+ E + G+V T+
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREM--RVSGLVEPDTHTYPF 126
Query: 76 MVDGYARKGEMEAAREVFELMPERN----CFVWSSMVSGYCKKGSVAEAETIFGRIPVRS 131
++ ++ + ++ +V +S++ Y G VA A +F ++P +
Sbjct: 127 LIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKD 186
Query: 132 LEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHH 191
L WN++I G+ +NG E AL + EM ++G +PD FT+VS+LSACA++G L GK++H
Sbjct: 187 LVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHV 246
Query: 192 MIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCRE 251
+ LT N + L+D+YA+CG + A+ +F+ +N W ++I G A+NG +E
Sbjct: 247 YMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKE 306
Query: 252 VLEFFGRMENLN-IRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYAIEMGIKHYGCM 309
+E F ME+ + P ITF+ +L AC+H G++ E E +M E Y IE I+H+GCM
Sbjct: 307 AIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCM 366
Query: 310 VDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAE----QVIKLIGTNS 365
VDLL RAG++K+AY+ IK MPM+PN + +LGAC H D +AE Q+++L +S
Sbjct: 367 VDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHS 426
Query: 366 ITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
VLLSN+YA+ ++W +K+R M+ +K+ G
Sbjct: 427 -----GDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPG 462
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 129/273 (47%), Gaps = 15/273 (5%)
Query: 6 VVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPH 65
+ N+++ Y GD+ SA VF++MP K V W+ +I GFA NG A L+ E
Sbjct: 156 IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM-- 213
Query: 66 ELKGV----VTWTVMVDGYARKGEMEAAREVFELMPE----RNCFVWSSMVSGYCKKGSV 117
KG+ T ++ A+ G + + V M + RN + ++ Y + G V
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
Query: 118 AEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRA-EGFEPDEFTVVSVLSA 176
EA+T+F + ++ W ++I G NGFG+ A++ F+ M + EG P E T V +L A
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333
Query: 177 CAQLGLLDAG-KQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT-QRNIC 234
C+ G++ G + M E ++ +VD+ A+ G + A + Q N+
Sbjct: 334 CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVV 393
Query: 235 CWNAMISGFAINGKCREVLEFFGRMENLNIRPD 267
W ++ ++G L F R++ L + P+
Sbjct: 394 IWRTLLGACTVHGDSD--LAEFARIQILQLEPN 424
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 18/190 (9%)
Query: 4 RNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE- 62
RN+ + N ++ Y R G +E A +F+EM K V+W+ +I G A NG A LF
Sbjct: 255 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 314
Query: 63 ------APHELKGV-VTWTVMVDGYARKG--EMEAAREVFELMPERNCFVWSSMVSGYCK 113
P E+ V + + G ++G RE +++ P F MV +
Sbjct: 315 ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHF--GCMVDLLAR 372
Query: 114 KGSVAEAETIFGRIPVR-SLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD---EFT 169
G V +A +P++ ++ IW T++ + G+ L F ++ EP+ ++
Sbjct: 373 AGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH--GDSDLAEFARIQILQLEPNHSGDYV 430
Query: 170 VVSVLSACAQ 179
++S + A Q
Sbjct: 431 LLSNMYASEQ 440
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 246 bits (629), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 142/415 (34%), Positives = 230/415 (55%), Gaps = 16/415 (3%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
E +V N +I+ Y + G +E A VF+ M ++ V+W+ MIG + RN + A +F E
Sbjct: 93 EGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLE 152
Query: 63 APHELKGVVTWT---------VMVDGY-ARKGEMEAAREVFELMPERNCFVWSSMVSGYC 112
+E +T V D +K + + +L N +V ++++ Y
Sbjct: 153 MRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDL----NLYVGTALLDLYA 208
Query: 113 KKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVS 172
K G + +A +F + +S W++M+AGYVQN E AL + + E ++FT+ S
Sbjct: 209 KCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSS 268
Query: 173 VLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRN 232
V+ AC+ L L GKQ+H +I N FV S VDMYAKCG L + ++F ++N
Sbjct: 269 VICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKN 328
Query: 233 ICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVIS 292
+ WN +ISGFA + + +EV+ F +M+ + P+ +TF ++LS C H GL+ E
Sbjct: 329 LELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFK 388
Query: 293 KME-AYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDM 351
M Y + + HY CMVD+LGRAG L EAY+LIK +P +P ++ G++L +CR + ++
Sbjct: 389 LMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNL 448
Query: 352 KMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
++AE + + A +H VLLSNIYAA+++WE+ K R ++ D + +K+ G
Sbjct: 449 ELAEVAAEKLFELEPENAGNH-VLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRG 502
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 12/182 (6%)
Query: 156 EEMRAEGFEPDEFT----VVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDM 211
+E + G +EF+ V +L CA+ G + K H I L + +L+ L++
Sbjct: 46 QEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINA 105
Query: 212 YAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITF 271
Y+KCG + AR VF+G +R++ WN MI + N E L+ F M N + T
Sbjct: 106 YSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTI 165
Query: 272 LTVLSACAHGGLLSEALEVISKMEAYAIEMGIK---HYG-CMVDLLGRAGRLKEAYDLIK 327
+VLSAC G+ +ALE K+ +++ I + G ++DL + G +K+A + +
Sbjct: 166 SSVLSAC---GVNCDALEC-KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFE 221
Query: 328 RM 329
M
Sbjct: 222 SM 223
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 242 bits (617), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 152/427 (35%), Positives = 220/427 (51%), Gaps = 27/427 (6%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEM------PGKTGVTWSQMIGGFARNGDTA 54
M +RNVV+WN++I+ + +NG A VF+ M P + VT + +I A
Sbjct: 213 MGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDE--VTLASVISACASLSAIK 270
Query: 55 TARRLFDEAPHELK---GVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGY 111
+ + K ++ VD YA+ ++ AR +F+ MP RN +SM+SGY
Sbjct: 271 VGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGY 330
Query: 112 CKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVV 171
S A +F ++ R++ WN +IAGY QNG E AL F ++ E P ++
Sbjct: 331 AMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFA 390
Query: 172 SVLSACAQLGLLDAGKQIH-HMIEH-----KRLTVNPFVLSGLVDMYAKCGDLVNARLVF 225
++L ACA L L G Q H H+++H + FV + L+DMY KCG + LVF
Sbjct: 391 NILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVF 450
Query: 226 EGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLS 285
+R+ WNAMI GFA NG E LE F M +PD IT + VLSAC H G +
Sbjct: 451 RKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVE 510
Query: 286 EALEVISKM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGA 344
E S M + + HY CMVDLLGRAG L+EA +I+ MPM+P+ + G++L A
Sbjct: 511 EGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAA 570
Query: 345 CRTHSDMKM----AEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGE 400
C+ H ++ + AE+++++ +NS VLLSN+YA KWE +R M
Sbjct: 571 CKVHRNITLGKYVAEKLLEVEPSNS-----GPYVLLSNMYAELGKWEDVMNVRKSMRKEG 625
Query: 401 SEKIAGC 407
K GC
Sbjct: 626 VTKQPGC 632
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/257 (35%), Positives = 148/257 (57%), Gaps = 1/257 (0%)
Query: 76 MVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIW 135
++D Y++ G +E R+VF+ MP+RN + W+S+V+G K G + EA+++F +P R W
Sbjct: 61 LIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTW 120
Query: 136 NTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEH 195
N+M++G+ Q+ E AL F M EGF +E++ SVLSAC+ L ++ G Q+H +I
Sbjct: 121 NSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAK 180
Query: 196 KRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEF 255
+ ++ S LVDMY+KCG++ +A+ VF+ RN+ WN++I+ F NG E L+
Sbjct: 181 SPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDV 240
Query: 256 FGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISK-MEAYAIEMGIKHYGCMVDLLG 314
F M + PD +T +V+SACA + EV + ++ + I VD+
Sbjct: 241 FQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYA 300
Query: 315 RAGRLKEAYDLIKRMPM 331
+ R+KEA + MP+
Sbjct: 301 KCSRIKEARFIFDSMPI 317
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 192/392 (48%), Gaps = 57/392 (14%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
MP+RN+ TWN++++G + G ++ A +F MP + TW+ M+ GFA++ A F
Sbjct: 81 MPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYF 140
Query: 61 DEAPHELKGVV----TWTVMVDGYARKGEMEAAREVFELMPE----RNCFVWSSMVSGYC 112
A +G V ++ ++ + +M +V L+ + + ++ S++V Y
Sbjct: 141 --AMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYS 198
Query: 113 KKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVS 172
K G+V +A+ +F + R++ WN++I + QNG AL F+ M EPDE T+ S
Sbjct: 199 KCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLAS 258
Query: 173 VLSACAQLGLLDAGKQIH-HMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEG---- 227
V+SACA L + G+++H ++++ +L + + + VDMYAKC + AR +F+
Sbjct: 259 VISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
Query: 228 ------------------------FT---QRNICCWNAMISGFAINGKCREVLEFFGRME 260
FT +RN+ WNA+I+G+ NG+ E L F ++
Sbjct: 319 NVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLK 378
Query: 261 NLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYG----------CMV 310
++ P +F +L ACA L+E L + + + ++ G K ++
Sbjct: 379 RESVCPTHYSFANILKACAD---LAE-LHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLI 434
Query: 311 DLLGRAGRLKEAYDLIKRMPMEPNETVLGAML 342
D+ + G ++E Y + ++M ME + AM+
Sbjct: 435 DMYVKCGCVEEGYLVFRKM-MERDCVSWNAMI 465
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 41/253 (16%)
Query: 162 GFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA 221
GF + F ++ A ++ G L+ G+Q+ + + + V++GL K G L A
Sbjct: 50 GFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLT----KLGFLDEA 105
Query: 222 RLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHG 281
+F +R+ C WN+M+SGFA + +C E L +F M + +F +VLSAC+
Sbjct: 106 DSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGL 165
Query: 282 GLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLK--------------------- 320
+++ ++V S + + +VD+ + G +
Sbjct: 166 NDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLI 225
Query: 321 ----------EAYDLIKRM---PMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSIT 367
EA D+ + M +EP+E L +++ AC + S +K+ ++V + N
Sbjct: 226 TCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKL 285
Query: 368 RADSHNVLLSNIY 380
R D ++LSN +
Sbjct: 286 RND---IILSNAF 295
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 241 bits (616), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 141/436 (32%), Positives = 219/436 (50%), Gaps = 52/436 (11%)
Query: 6 VVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPH 65
+V WN ++ Y + G + A VF+EMP + +W+ M+ G+A G AR+LFDE
Sbjct: 120 IVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTE 179
Query: 66 ELKGVVTWTVMVDGYARKGEMEAAREVFELM-----PERNCF------------------ 102
K +WT MV GY +K + E A ++ LM N F
Sbjct: 180 --KDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRG 237
Query: 103 -----------------VWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQN 145
+WSS++ Y K G + EA IF +I + + W +MI Y ++
Sbjct: 238 KEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKS 297
Query: 146 GFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVL 205
F E+ P+E+T VL+ACA L + GKQ+H + F
Sbjct: 298 SRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFAS 357
Query: 206 SGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIR 265
S LVDMY KCG++ +A+ V +G + ++ W ++I G A NG+ E L++F + +
Sbjct: 358 SSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTK 417
Query: 266 PDAITFLTVLSACAHGGLLSEALEVI-SKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYD 324
PD +TF+ VLSAC H GL+ + LE S E + + HY C+VDLL R+GR ++
Sbjct: 418 PDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKS 477
Query: 325 LIKRMPMEPNETVLGAMLGACRTHSDMKMAE----QVIKLIGTNSITRADSHNVLLSNIY 380
+I MPM+P++ + ++LG C T+ ++ +AE ++ K+ N +T V ++NIY
Sbjct: 478 VISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTY-----VTMANIY 532
Query: 381 AASEKWEKAEKMRGIM 396
AA+ KWE+ KMR M
Sbjct: 533 AAAGKWEEEGKMRKRM 548
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 158/321 (49%), Gaps = 13/321 (4%)
Query: 67 LKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGR 126
+ G+V W ++ YA+ G + AR+VF+ MP R+ W+ MV+GY + G + EA +F
Sbjct: 117 VPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDE 176
Query: 127 IPVRSLEIWNTMIAGYVQNGFGERALQAFEEM-RAEGFEPDEFTVVSVLSACAQLGLLDA 185
+ + W M+ GYV+ E AL + M R P+ FTV ++A A + +
Sbjct: 177 MTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRR 236
Query: 186 GKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAI 245
GK+IH I L + + S L+DMY KCG + AR +F+ ++++ W +MI +
Sbjct: 237 GKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFK 296
Query: 246 NGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKH 305
+ + RE F + RP+ TF VL+ACA L +E E+ ++ Y +G
Sbjct: 297 SSRWREGFSLFSELVGSCERPNEYTFAGVLNACA--DLTTE--ELGKQVHGYMTRVGFDP 352
Query: 306 Y----GCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLI 361
Y +VD+ + G ++ A ++ P +P+ +++G C + A + L+
Sbjct: 353 YSFASSSLVDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGCAQNGQPDEALKYFDLL 411
Query: 362 GTNSITRADSHNVLLSNIYAA 382
S T+ D +V N+ +A
Sbjct: 412 -LKSGTKPD--HVTFVNVLSA 429
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 4/148 (2%)
Query: 148 GERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSG 207
G++ L+ ++ +P T +++ C+Q L+ GK++H I + +
Sbjct: 66 GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 125
Query: 208 LVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPD 267
L+ MYAKCG LV+AR VF+ R++C WN M++G+A G E + F M D
Sbjct: 126 LLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM----TEKD 181
Query: 268 AITFLTVLSACAHGGLLSEALEVISKME 295
+ ++ +++ EAL + S M+
Sbjct: 182 SYSWTAMVTGYVKKDQPEEALVLYSLMQ 209
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 109/282 (38%), Gaps = 41/282 (14%)
Query: 112 CKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVV 171
C + + EA + GR + +I Q E + E +R GF P
Sbjct: 65 CGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWN 124
Query: 172 SVLSACAQLG-LLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ 230
+L A+ G L+DA K M + N +V+ YA+ G L AR +F+ T+
Sbjct: 125 RLLRMYAKCGSLVDARKVFDEMPNRDLCSWNV-----MVNGYAEVGLLEEARKLFDEMTE 179
Query: 231 RNICCWNAMISGFAINGKCREVLEFFGRMENL-NIRPDAITF-----LTVLSAC------ 278
++ W AM++G+ + E L + M+ + N RP+ T C
Sbjct: 180 KDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKE 239
Query: 279 AHG-----GLLSEALEVISKMEAYA---------------IEMGIKHYGCMVDLLGRAGR 318
HG GL S+ + S M+ Y +E + + M+D ++ R
Sbjct: 240 IHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSR 299
Query: 319 LKEAYDLIKRMP---MEPNETVLGAMLGACRTHSDMKMAEQV 357
+E + L + PNE +L AC + ++ +QV
Sbjct: 300 WREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQV 341
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 241 bits (616), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 222/409 (54%), Gaps = 14/409 (3%)
Query: 9 WNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPH--E 66
WN +I G+ + + E + V+ +M + G+ M F + + R + H
Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQML-RFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSV 134
Query: 67 LKGVVTWTV-----MVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAE 121
+K + W + ++ Y + +AR++F+ MP +N W+S++ Y K G V A
Sbjct: 135 VKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSAR 194
Query: 122 TIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEM-RAEGFEPDEFTVVSVLSACAQL 180
+F + R + W++MI GYV+ G +AL+ F++M R + +E T+VSV+ ACA L
Sbjct: 195 LVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHL 254
Query: 181 GLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVF--EGFTQRNICCWNA 238
G L+ GK +H I L + + + L+DMYAKCG + +A VF + + WNA
Sbjct: 255 GALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNA 314
Query: 239 MISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYA 298
+I G A +G RE L+ F +M I PD ITFL +L+AC+HGGL+ EA ++
Sbjct: 315 IIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESG 374
Query: 299 IEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQV- 357
E +HY CMVD+L RAG +K+A+D I MP++P ++LGA+L C H ++++AE V
Sbjct: 375 AEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVG 434
Query: 358 IKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
KLI D V L+N+YA ++++ A MR M +KIAG
Sbjct: 435 KKLIELQ--PHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAG 481
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 104/192 (54%), Gaps = 9/192 (4%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
MP +N+VTWN+++ Y ++GD+ SA LVF+EM + VTWS MI G+ + G+ A +F
Sbjct: 169 MPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIF 228
Query: 61 DEAPH---ELKGVVTWTVMVDGYARKGEME----AAREVFELMPERNCFVWSSMVSGYCK 113
D+ VT ++ A G + R + ++ + +S++ Y K
Sbjct: 229 DQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAK 288
Query: 114 KGSVAEAETIFGRIPVRSLE--IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVV 171
GS+ +A ++F R V+ + +WN +I G +GF +LQ F +MR +PDE T +
Sbjct: 289 CGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFL 348
Query: 172 SVLSACAQLGLL 183
+L+AC+ GL+
Sbjct: 349 CLLAACSHGGLV 360
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 241 bits (615), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 141/431 (32%), Positives = 236/431 (54%), Gaps = 25/431 (5%)
Query: 1 MPERNVVTWNAMISGYMRNGDMES--ASLVFEEMPGKTGV-----TWSQMIGGFARNGDT 53
MP+RN +WN +I G+ + + ++ A +F EM V T+ ++ A+ G
Sbjct: 85 MPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKI 144
Query: 54 ATARRLFDEAPHELKGVVTWTV--MVDGYARKGEMEAAREVFE---------LMPERN-- 100
+++ A G + + +V Y G M+ AR +F +M +R
Sbjct: 145 QEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKR 204
Query: 101 ---CFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEE 157
+W+ M+ GY + G A +F ++ RS+ WNTMI+GY NGF + A++ F E
Sbjct: 205 DGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFRE 264
Query: 158 MRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGD 217
M+ P+ T+VSVL A ++LG L+ G+ +H E + ++ + S L+DMY+KCG
Sbjct: 265 MKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGI 324
Query: 218 LVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSA 277
+ A VFE + N+ W+AMI+GFAI+G+ + ++ F +M +RP + ++ +L+A
Sbjct: 325 IEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTA 384
Query: 278 CAHGGLLSEALEVISKMEAY-AIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNET 336
C+HGGL+ E S+M + +E I+HYGCMVDLLGR+G L EA + I MP++P++
Sbjct: 385 CSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDV 444
Query: 337 VLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIM 396
+ A+LGACR +++M ++V ++ + + V LSN+YA+ W + +MR M
Sbjct: 445 IWKALLGACRMQGNVEMGKRVANIL-MDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRM 503
Query: 397 VDGESEKIAGC 407
+ + K GC
Sbjct: 504 KEKDIRKDPGC 514
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 139/314 (44%), Gaps = 84/314 (26%)
Query: 85 EMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQ 144
+++ A ++F MP+RNCF W++++ G+ + E + +
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESD---EDKALI-------------------- 110
Query: 145 NGFGERALQAFEEMRAEGF-EPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPF 203
A+ F EM ++ F EP+ FT SVL ACA+ G + GKQIH + + F
Sbjct: 111 ------AITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEF 164
Query: 204 VLSGLVDMYAKC---------------------------------------------GDL 218
V+S LV MY C GD
Sbjct: 165 VMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDC 224
Query: 219 VNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSAC 278
AR++F+ QR++ WN MISG+++NG ++ +E F M+ +IRP+ +T ++VL A
Sbjct: 225 KAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAI 284
Query: 279 AHGGLLSEALEVISKMEAYAIEMGIKHY----GCMVDLLGRAGRLKEAYDLIKRMPMEPN 334
+ G +LE+ + YA + GI+ ++D+ + G +++A + +R+P E N
Sbjct: 285 SRLG----SLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE-N 339
Query: 335 ETVLGAMLGACRTH 348
AM+ H
Sbjct: 340 VITWSAMINGFAIH 353
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/435 (32%), Positives = 227/435 (52%), Gaps = 46/435 (10%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
MPER+VV+W AM++G R+G ++ A +F +MP K W+ M+ G+ + G A +LF
Sbjct: 123 MPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLF 182
Query: 61 DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNC------------------- 101
+ P K V++WT M+ G + A ++F+ M R C
Sbjct: 183 KQMPG--KNVISWTTMICGLDQNERSGEALDLFKNML-RCCIKSTSRPFTCVITACANAP 239
Query: 102 ---------------------FVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIA 140
+V +S+++ Y + ++ +F + +W +++
Sbjct: 240 AFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLS 299
Query: 141 GYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTV 200
GY N E AL F M P++ T S L++C+ LG LD GK++H + L
Sbjct: 300 GYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLET 359
Query: 201 NPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRME 260
+ FV + LV MY+ G++ +A VF +++I WN++I G A +G+ + FG+M
Sbjct: 360 DAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMI 419
Query: 261 NLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA--YAIEMGIKHYGCMVDLLGRAGR 318
LN PD ITF +LSAC+H G L + ++ M + I+ I+HY CMVD+LGR G+
Sbjct: 420 RLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGK 479
Query: 319 LKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSN 378
LKEA +LI+RM ++PNE V A+L ACR HSD+ E+ I N +++ + VLLSN
Sbjct: 480 LKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAI-FNLDSKSSAAYVLLSN 538
Query: 379 IYAASEKWEKAEKMR 393
IYA++ +W K+R
Sbjct: 539 IYASAGRWSNVSKLR 553
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 208/440 (47%), Gaps = 38/440 (8%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
+P +V + MI+GY R+ + A +F+EMP + V+W+ MI G GD TA +LF
Sbjct: 61 VPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLF 120
Query: 61 DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEA 120
DE P + VV+WT MV+G R G+++ A +F MP ++ W+SMV GY + G V +A
Sbjct: 121 DEMPE--RSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDA 178
Query: 121 ETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQL 180
+F ++P +++ W TMI G QN AL F+ M + V++ACA
Sbjct: 179 LKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANA 238
Query: 181 GLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMI 240
G Q+H +I +V + L+ YA C + ++R VF+ + W A++
Sbjct: 239 PAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALL 298
Query: 241 SGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA-----------HG-----GLL 284
SG+++N K + L F M +I P+ TF + L++C+ HG GL
Sbjct: 299 SGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLE 358
Query: 285 SEALEVISKMEAY--------AIEMGIK-------HYGCMVDLLGRAGRLKEAYDLIK-- 327
++A S + Y A+ + IK + ++ + GR K A+ +
Sbjct: 359 TDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQM 418
Query: 328 -RMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLI--GTNSITRADSHNVLLSNIYAASE 384
R+ EP+E +L AC ++ ++ + G N I R H + +I
Sbjct: 419 IRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCG 478
Query: 385 KWEKAEKMRGIMVDGESEKI 404
K ++AE++ MV +E +
Sbjct: 479 KLKEAEELIERMVVKPNEMV 498
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 132/285 (46%), Gaps = 35/285 (12%)
Query: 75 VMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEI 134
V++ + ++ AREVF +P + +++ M++GY + + +A +F +PVR +
Sbjct: 40 VLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVS 99
Query: 135 WNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV--VSVLSACAQLGLLDAGKQIHHM 192
WN+MI+G V+ G A++ F+EM P+ V ++++ C + G +D +++ +
Sbjct: 100 WNSMISGCVECGDMNTAVKLFDEM------PERSVVSWTAMVNGCFRSGKVDQAERLFYQ 153
Query: 193 IEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREV 252
+ K + + +V Y + G + +A +F+ +N+ W MI G N + E
Sbjct: 154 MPVK----DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEA 209
Query: 253 LEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDL 312
L+ F M I+ + F V++ACA+ A A MGI+ +G ++ L
Sbjct: 210 LDLFKNMLRCCIKSTSRPFTCVITACAN---------------APAFHMGIQVHGLIIKL 254
Query: 313 LGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQV 357
G L E Y + N +G R D K+ EQV
Sbjct: 255 ----GFLYEEYVSASLITFYAN----CKRIGDSRKVFDEKVHEQV 291
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 240 bits (612), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 134/415 (32%), Positives = 229/415 (55%), Gaps = 17/415 (4%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
+ +V +++++ YM+ G M+ A ++F +M + + W+ M+ GFA+ G + A + E
Sbjct: 148 KNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYRE 207
Query: 63 APHELKGV--VTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKGS 116
+E G V ++ G+ + R V + N V +S+V Y K G
Sbjct: 208 MQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGF 267
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+ A +F R+ ++ W ++I+G+ QNG +A +A EM++ GF+PD T+V VL A
Sbjct: 268 IEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVA 327
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
C+Q+G L G+ +H I KR ++ + L+DMY+KCG L ++R +FE ++++ CW
Sbjct: 328 CSQVGSLKTGRLVHCYIL-KRHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCW 386
Query: 237 NAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-E 295
N MIS + I+G +EV+ F +M NI PD TF ++LSA +H GL+ + S M
Sbjct: 387 NTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMIN 446
Query: 296 AYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAE 355
Y I+ KHY C++DLL RAGR++EA D+I ++ + A+L C H ++ + +
Sbjct: 447 KYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGD 506
Query: 356 QVIKLIGTNSITRADSHNV----LLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
I N I + + ++ L+SN +A + KW++ K+R +M +G EK+ G
Sbjct: 507 -----IAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPG 556
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 191/423 (45%), Gaps = 44/423 (10%)
Query: 12 MISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE------APH 65
+I+ R G++ A VF+E+P + ++ MI ++R + RL+D+ P
Sbjct: 56 LIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPD 115
Query: 66 ELKGVVTWTVMVDGYA-RKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIF 124
+T + G KGE + V + + + FV SS+++ Y K G + EAE +F
Sbjct: 116 SSTFTMTIKACLSGLVLEKGEAVWCKAV-DFGYKNDVFVCSSVLNLYMKCGKMDEAEVLF 174
Query: 125 GRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLD 184
G++ R + W TM+ G+ Q G +A++ + EM+ EGF D ++ +L A LG
Sbjct: 175 GKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTK 234
Query: 185 AGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFA 244
G+ +H + L +N V + LVDMYAK G + A VF + W ++ISGFA
Sbjct: 235 MGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFA 294
Query: 245 INGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEA---------LEVISKME 295
NG + E M++L +PD +T + VL AC+ G L V+ ++
Sbjct: 295 QNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVT 354
Query: 296 AYAI------------------EMGIKHYGC---MVDLLGRAGRLKEAYDLIKRMP---M 331
A A+ +G K C M+ G G +E L +M +
Sbjct: 355 ATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNI 414
Query: 332 EPNETVLGAMLGACRTHSDMKMAEQ--VIKLIGTNSITRADSHNVLLSNIYAASEKWEKA 389
EP+ ++L A +HS + Q +I I ++ H V L ++ A + + E+A
Sbjct: 415 EPDHATFASLLSAL-SHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEA 473
Query: 390 EKM 392
M
Sbjct: 474 LDM 476
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 141/441 (31%), Positives = 238/441 (53%), Gaps = 44/441 (9%)
Query: 9 WNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE------ 62
WN+++ YM G+ A VF MP +++ MI G+A+ G + A +L+ +
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGI 228
Query: 63 APHEL------------------KGVVTW---------------TVMVDGYARKGEMEAA 89
P E KGV W ++D Y + E A
Sbjct: 229 EPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLA 288
Query: 90 REVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGE 149
+ F+ M +++ W++MV G+ + G + A+ +F ++P R L WN+++ GY + G +
Sbjct: 289 KRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQ 348
Query: 150 RAL-QAFEEMR-AEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSG 207
R + + F EM E +PD T+VS++S A G L G+ +H ++ +L + F+ S
Sbjct: 349 RTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSA 408
Query: 208 LVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPD 267
L+DMY KCG + A +VF+ T++++ W +MI+G A +G ++ L+ FGRM+ + P+
Sbjct: 409 LIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPN 468
Query: 268 AITFLTVLSACAHGGLLSEALEVISKM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLI 326
+T L VL+AC+H GL+ E L V + M + + + +HYG +VDLL RAGR++EA D++
Sbjct: 469 NVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIV 528
Query: 327 -KRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEK 385
K+MPM P++++ G++L ACR D++ AE + + + + VLLSNIYA +
Sbjct: 529 QKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGY-VLLSNIYATVGR 587
Query: 386 WEKAEKMRGIMVDGESEKIAG 406
W ++K R M + +K AG
Sbjct: 588 WGYSDKTREAMENRGVKKTAG 608
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 125/231 (54%), Gaps = 9/231 (3%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNG-DTATARRL 59
M ++++ +WN M+ G++R GDME+A VF++MP + V+W+ ++ G+++ G D T R L
Sbjct: 295 MKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVREL 354
Query: 60 FDEAPHELK---GVVTWTVMVDGYARKGEMEAAR----EVFELMPERNCFVWSSMVSGYC 112
F E K VT ++ G A GE+ R V L + + F+ S+++ YC
Sbjct: 355 FYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYC 414
Query: 113 KKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVS 172
K G + A +F + + +W +MI G +G G++ALQ F M+ EG P+ T+++
Sbjct: 415 KCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLA 474
Query: 173 VLSACAQLGLLDAGKQI-HHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNAR 222
VL+AC+ GL++ G + +HM + LVD+ + G + A+
Sbjct: 475 VLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAK 525
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 145/319 (45%), Gaps = 70/319 (21%)
Query: 102 FVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAE 161
++W+S+V Y + G+ AE +F R+P + +N MI GY + GF AL+ + +M ++
Sbjct: 167 YLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSD 226
Query: 162 GFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHK--RLTVNPFVLSGLVDMYAKC---- 215
G EPDE+TV+S+L C L + GK +H IE + + N + + L+DMY KC
Sbjct: 227 GIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESG 286
Query: 216 ---------------------------GDLVNARLVFEGFTQRNICCWNAMISGFAING- 247
GD+ A+ VF+ +R++ WN+++ G++ G
Sbjct: 287 LAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGC 346
Query: 248 KCREVLEFFGRMENL-NIRPDAITFLTVLSACAHGGLLSE-------ALEVISKMEAY-- 297
R V E F M + ++PD +T ++++S A+ G LS + + K +A+
Sbjct: 347 DQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLS 406
Query: 298 ----------------------AIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME--- 332
A E + + M+ L G ++A L RM E
Sbjct: 407 SALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVT 466
Query: 333 PNETVLGAMLGACRTHSDM 351
PN L A+L AC +HS +
Sbjct: 467 PNNVTLLAVLTAC-SHSGL 484
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 128 PVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGK 187
P ++ ++NTMI+ + + M PD T + ++ A + L K
Sbjct: 96 PNPNVFVYNTMISAVSSSK--NECFGLYSSMIRHRVSPDRQTFLYLMKASS---FLSEVK 150
Query: 188 QIH-HMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAIN 246
QIH H+I L++ ++ + LV Y + G+ A VF ++ +N MI G+A
Sbjct: 151 QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQ 210
Query: 247 GKCREVLEFFGRMENLNIRPDAITFLTVLSACAH 280
G E L+ + +M + I PD T L++L C H
Sbjct: 211 GFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGH 244
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/355 (34%), Positives = 208/355 (58%), Gaps = 8/355 (2%)
Query: 49 RNGDTATARRLFDEAPH--ELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSS 106
+NGD + L +A L + T ++ Y+ +++A ++F+ P+R+ ++
Sbjct: 129 KNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNV 188
Query: 107 MVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
++ G K + A +F +P+R L WN++I+GY Q A++ F+EM A G +PD
Sbjct: 189 LIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPD 248
Query: 167 EFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFE 226
+VS LSACAQ G GK IH + KRL ++ F+ +GLVD YAKCG + A +FE
Sbjct: 249 NVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFE 308
Query: 227 GFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSE 286
+ + + WNAMI+G A++G +++F +M + I+PD +TF++VL C+H GL+ E
Sbjct: 309 LCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDE 368
Query: 287 ALEVISKMEA-YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME--PNETVLG--AM 341
A + +M + Y + +KHYGCM DLLGRAG ++EA ++I++MP + E +L +
Sbjct: 369 ARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGL 428
Query: 342 LGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIM 396
LG CR H ++++AE+ + S + V++ +YA +E+WE+ K+R I+
Sbjct: 429 LGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMV-EMYANAERWEEVVKVREII 482
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 100/198 (50%), Gaps = 14/198 (7%)
Query: 2 PERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFD 61
P+R+VVT+N +I G ++ ++ A +F+ MP + V+W+ +I G+A+ A +LFD
Sbjct: 179 PQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFD 238
Query: 62 E------APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSG----Y 111
E P + V T + A+ G+ + + + + + F+ S + +G Y
Sbjct: 239 EMVALGLKPDNVAIVST----LSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFY 294
Query: 112 CKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVV 171
K G + A IF ++L WN MI G +G GE + F +M + G +PD T +
Sbjct: 295 AKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFI 354
Query: 172 SVLSACAQLGLLDAGKQI 189
SVL C+ GL+D + +
Sbjct: 355 SVLVGCSHSGLVDEARNL 372
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 85/208 (40%), Gaps = 34/208 (16%)
Query: 109 SGYCKKGSVAEAETIFGRIPVRSLEIWNTMI-AGYVQNGFGERALQAFEEMRAEGFEPDE 167
S K V+ A ++F I S +NT+I + + + F EMR PD
Sbjct: 56 SASASKEVVSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDF 115
Query: 168 FTVVSVLSACA--QLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVF 225
T V ACA + G L K +H L + F L+ L+ +Y+ + +A +F
Sbjct: 116 HTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLF 175
Query: 226 EGFTQRNICC-------------------------------WNAMISGFAINGKCREVLE 254
+ QR++ WN++ISG+A CRE ++
Sbjct: 176 DENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIK 235
Query: 255 FFGRMENLNIRPDAITFLTVLSACAHGG 282
F M L ++PD + ++ LSACA G
Sbjct: 236 LFDEMVALGLKPDNVAIVSTLSACAQSG 263
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 239 bits (609), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 116/318 (36%), Positives = 189/318 (59%), Gaps = 3/318 (0%)
Query: 43 MIGGFARNGDTATARRLFDEAPHELK--GVVTWTVMVDGYARKGEMEAAREVFELMPERN 100
++ +A+ G A ++F+E+P +K ++ W V+++GY R +M A +F MPERN
Sbjct: 167 LVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERN 226
Query: 101 CFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRA 160
WS+++ GY G + A+ +F +P +++ W T+I G+ Q G E A+ + EM
Sbjct: 227 SGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLE 286
Query: 161 EGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVN 220
+G +P+E+T+ +VLSAC++ G L +G +IH I + ++ + + LVDMYAKCG+L
Sbjct: 287 KGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDC 346
Query: 221 ARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAH 280
A VF ++I W AMI G+A++G+ + ++ F +M +PD + FL VL+AC +
Sbjct: 347 AATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLN 406
Query: 281 GGLLSEALEVISKMEA-YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLG 339
+ L M YAIE +KHY +VDLLGRAG+L EA++L++ MP+ P+ T
Sbjct: 407 SSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWA 466
Query: 340 AMLGACRTHSDMKMAEQV 357
A+ AC+ H + AE V
Sbjct: 467 ALYRACKAHKGYRRAESV 484
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 132/288 (45%), Gaps = 57/288 (19%)
Query: 2 PER----NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATAR 57
P+R +++ WN +I+GY R DM A+ +F MP + +WS +I G+ +G+ A+
Sbjct: 188 PDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAK 247
Query: 58 RLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER------------------ 99
+LF+ P K VV+WT +++G+++ G+ E A + M E+
Sbjct: 248 QLFELMPE--KNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSK 305
Query: 100 ---------------------NCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTM 138
+ + +++V Y K G + A T+F + + + W M
Sbjct: 306 SGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAM 365
Query: 139 IAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAG------KQIHHM 192
I G+ +G +A+Q F +M G +PDE ++VL+AC +D G ++ +
Sbjct: 366 IQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYA 425
Query: 193 IEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT-QRNICCWNAM 239
IE T+ +VL +VD+ + G L A + E ++ W A+
Sbjct: 426 IEP---TLKHYVL--VVDLLGRAGKLNEAHELVENMPINPDLTTWAAL 468
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 117/268 (43%), Gaps = 17/268 (6%)
Query: 122 TIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLG 181
+IF R+ + N +I G +N E +++ F M G +PD T VL + ++LG
Sbjct: 81 SIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLG 140
Query: 182 LLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQR----NICCWN 237
G+ +H + + FV LVDMYAK G L +A VFE R +I WN
Sbjct: 141 FRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWN 200
Query: 238 AMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAY 297
+I+G+ F M N + ++ T++ G L+ A ++ M
Sbjct: 201 VLINGYCRAKDMHMATTLFRSMPERN----SGSWSTLIKGYVDSGELNRAKQLFELMP-- 254
Query: 298 AIEMGIKHYGCMVDLLGRAGRLKEA----YDLIKRMPMEPNETVLGAMLGACRTHSDMKM 353
E + + +++ + G + A ++++++ ++PNE + A+L AC +
Sbjct: 255 --EKNVVSWTTLINGFSQTGDYETAISTYFEMLEK-GLKPNEYTIAAVLSACSKSGALGS 311
Query: 354 AEQVIKLIGTNSITRADSHNVLLSNIYA 381
++ I N I + L ++YA
Sbjct: 312 GIRIHGYILDNGIKLDRAIGTALVDMYA 339
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 239 bits (609), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 143/413 (34%), Positives = 222/413 (53%), Gaps = 10/413 (2%)
Query: 4 RNVVTWNAMISGYMRNGDMESASLVFEEMPGKTG------VTWSQMIGGFARNGDTATAR 57
+N WN +I G+ R+ E A +F +M + +T+ + + R G R
Sbjct: 87 KNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGR 146
Query: 58 RLFDEAPHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKG 115
+L E M+ Y G + A +F M + W+SM+ G+ K G
Sbjct: 147 QLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCG 206
Query: 116 SVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLS 175
+ +A+ +F +P R+ WN+MI+G+V+NG + AL F EM+ + +PD FT+VS+L+
Sbjct: 207 LIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLN 266
Query: 176 ACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICC 235
ACA LG + G+ IH I R +N V++ L+DMY KCG + VFE ++ + C
Sbjct: 267 ACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSC 326
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM- 294
WN+MI G A NG ++ F +E + PD+++F+ VL+ACAH G + A E M
Sbjct: 327 WNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMK 386
Query: 295 EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMA 354
E Y IE IKHY MV++LG AG L+EA LIK MP+E + + ++L ACR +++MA
Sbjct: 387 EKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMA 446
Query: 355 EQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
++ K + + VLLSN YA+ +E+A + R +M + + EK GC
Sbjct: 447 KRAAKCLKKLDPDETCGY-VLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGC 498
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 157/360 (43%), Gaps = 70/360 (19%)
Query: 103 VWSSMVSGYC--KKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEM-- 158
V +S V +C + A +F RI ++ +WNT+I G+ ++ F E A+ F +M
Sbjct: 58 VTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLC 117
Query: 159 RAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDL 218
+ +P T SV A +LG G+Q+H M+ + L + F+ + ++ MY CG L
Sbjct: 118 SSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCL 177
Query: 219 VNARLVFEG-------------------------------FTQRNICCWNAMISGFAING 247
+ A +F G QRN WN+MISGF NG
Sbjct: 178 IEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNG 237
Query: 248 KCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSE----------------ALEVI 291
+ ++ L+ F M+ +++PD T +++L+ACA+ G + ++ V
Sbjct: 238 RFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVT 297
Query: 292 SKMEAY----AIEMGIKHYGC-----------MVDLLGRAGRLKEAYDL---IKRMPMEP 333
+ ++ Y IE G+ + C M+ L G + A DL ++R +EP
Sbjct: 298 ALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEP 357
Query: 334 NETVLGAMLGACRTHSDMKMAEQVIKLIGTNS-ITRADSHNVLLSNIYAASEKWEKAEKM 392
+ +L AC ++ A++ +L+ I + H L+ N+ + E+AE +
Sbjct: 358 DSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEAL 417
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 140/323 (43%), Gaps = 57/323 (17%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATA 56
MP+RN V+WN+MISG++RNG + A +F EM K G T ++ A G +
Sbjct: 218 MPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQG 277
Query: 57 RRLFD---EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCK 113
R + + EL +V T ++D Y + G +E VFE P++ W+S
Sbjct: 278 RWIHEYIVRNRFELNSIVV-TALIDMYCKCGCIEEGLNVFECAPKKQLSCWNS------- 329
Query: 114 KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSV 173
MI G NGF ERA+ F E+ G EPD + + V
Sbjct: 330 ------------------------MILGLANNGFEERAMDLFSELERSGLEPDSVSFIGV 365
Query: 174 LSACAQLGLLDAGKQIHHMIEHKRLTVNPFV--LSGLVDMYAKCGDLVNARLVFEGF-TQ 230
L+ACA G + + +++ K + + P + + +V++ G L A + + +
Sbjct: 366 LTACAHSGEVHRADEFFRLMKEKYM-IEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVE 424
Query: 231 RNICCWNAMISGFAINGKCREV--LEFFGRMENL--NIRPDAITFLTVLS-ACAHGGLLS 285
+ W++++S CR++ +E R + PD +LS A A GL
Sbjct: 425 EDTVIWSSLLSA------CRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFE 478
Query: 286 EALEVISKMEAYAIEMGIKHYGC 308
EA+E M+ +E K GC
Sbjct: 479 EAVEQRLLMKERQME---KEVGC 498
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 239 bits (609), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 128/344 (37%), Positives = 198/344 (57%), Gaps = 9/344 (2%)
Query: 70 VVTWTVMVDGYARK-GEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIP 128
VV T ++ YA + AR++F+ M ERN W++M+SGY + G ++ A +F +P
Sbjct: 161 VVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMP 220
Query: 129 VRSLEIWNTMIAGYVQNGFGERALQAFEEMRAE-GFEPDEFTVVSVLSACAQLGLLDAGK 187
R + WN ++A QNG A+ F M E P+E TVV VLSACAQ G L K
Sbjct: 221 ERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAK 280
Query: 188 QIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAING 247
IH + L+ + FV + LVD+Y KCG+L A VF+ +++++ WN+MI+ FA++G
Sbjct: 281 GIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHG 340
Query: 248 KCREVLEFFGRMENLN---IRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYAIEMGI 303
+ E + F M LN I+PD ITF+ +L+AC HGGL+S+ M + IE I
Sbjct: 341 RSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRI 400
Query: 304 KHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIK-LIG 362
+HYGC++DLLGRAGR EA +++ M M+ +E + G++L AC+ H + +AE +K L+
Sbjct: 401 EHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVA 460
Query: 363 TNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
N + +++N+Y WE+A + R ++ + K G
Sbjct: 461 LN--PNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPG 502
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 130/261 (49%), Gaps = 16/261 (6%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNG----DTATA 56
M ERNVV+W AM+SGY R+GD+ +A +FE+MP + +W+ ++ +NG +
Sbjct: 188 MSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLF 247
Query: 57 RRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYC 112
RR+ +E P VT ++ A+ G ++ A+ + R + FV +S+V Y
Sbjct: 248 RRMINE-PSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYG 306
Query: 113 KKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEM---RAEGFEPDEFT 169
K G++ EA ++F +SL WN+MI + +G E A+ FEEM +PD T
Sbjct: 307 KCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHIT 366
Query: 170 VVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFV--LSGLVDMYAKCGDLVNARLVFEG 227
+ +L+AC GL+ G+ ++ R + P + L+D+ + G A V
Sbjct: 367 FIGLLNACTHGGLVSKGRGYFDLMT-NRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMST 425
Query: 228 FTQR-NICCWNAMISGFAING 247
+ + W ++++ I+G
Sbjct: 426 MKMKADEAIWGSLLNACKIHG 446
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 238 bits (608), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 140/422 (33%), Positives = 226/422 (53%), Gaps = 24/422 (5%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEM------PGKTGVTWSQMIGGFARNGDTATA 56
E N+V+WN ++SG+ R+G + A ++F+++ P + VT S ++ +
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQ--VTVSSVLPSVGDSEMLNMG 271
Query: 57 RRLFDEAPHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKK 114
R + + LK + M+D Y + G + +F V ++ ++G +
Sbjct: 272 RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331
Query: 115 GSVAEAETIFGRIPVRSLEI----WNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
G V +A +F +++E+ W ++IAG QNG AL+ F EM+ G +P+ T+
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ 230
S+L AC + L G+ H L N V S L+DMYAKCG + +++VF
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT 451
Query: 231 RNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEV 290
+N+ CWN++++GF+++GK +EV+ F + ++PD I+F ++LSAC GL E +
Sbjct: 452 KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKY 511
Query: 291 ISKM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHS 349
M E Y I+ ++HY CMV+LLGRAG+L+EAYDLIK MP EP+ V GA+L +CR +
Sbjct: 512 FKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQN 571
Query: 350 DMKMAEQVIKLIGTNSITRADSHN----VLLSNIYAASEKWEKAEKMRGIMVDGESEKIA 405
++ +AE I + + N VLLSNIYAA W + + +R M +K
Sbjct: 572 NVDLAE-----IAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNP 626
Query: 406 GC 407
GC
Sbjct: 627 GC 628
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/318 (19%), Positives = 129/318 (40%), Gaps = 43/318 (13%)
Query: 53 TATARRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYC 112
T L ++ P + G + + + +A + + + + ++ + +++ Y
Sbjct: 2 TKQVLPLIEKIPQSIVGFLESSSYHWSSSLSKTTQAHARILKSGAQNDGYISAKLIASYS 61
Query: 113 KKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVS 172
+A+ + IP ++ ++++I + +++ F M + G PD + +
Sbjct: 62 NYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPN 121
Query: 173 VLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQR- 231
+ CA+L GKQIH + L ++ FV + MY +CG + +AR VF+ + +
Sbjct: 122 LFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKD 181
Query: 232 ----------------------------------NICCWNAMISGFAINGKCREVLEFFG 257
NI WN ++SGF +G +E + F
Sbjct: 182 VVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQ 241
Query: 258 RMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGC----MVDLL 313
++ +L PD +T +VL + SE L + + Y I+ G+ C M+D+
Sbjct: 242 KIHHLGFCPDQVTVSSVLPSVGD----SEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMY 297
Query: 314 GRAGRLKEAYDLIKRMPM 331
G++G + L + M
Sbjct: 298 GKSGHVYGIISLFNQFEM 315
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 136/337 (40%), Gaps = 55/337 (16%)
Query: 12 MISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKGVV 71
+I+ Y A LV + +P T ++S +I T +LF ++ +
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYAL-------TKAKLFTQSIGVFSRMF 108
Query: 72 TWTVMVDGYARKGEMEAAREV--FELMPERNC-----------FVWSSMVSGYCKKGSVA 118
+ ++ D + + E+ F++ + +C FV SM Y + G +
Sbjct: 109 SHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMG 168
Query: 119 EAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFE-------------- 164
+A +F R+ + + + ++ Y + G E ++ EM + G E
Sbjct: 169 DARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFN 228
Query: 165 ---------------------PDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPF 203
PD+ TV SVL + +L+ G+ IH + + L +
Sbjct: 229 RSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKC 288
Query: 204 VLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLN 263
V+S ++DMY K G + +F F NA I+G + NG + LE F +
Sbjct: 289 VISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQT 348
Query: 264 IRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIE 300
+ + +++ ++++ CA G EALE+ +M+ ++
Sbjct: 349 MELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVK 385
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 238 bits (608), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 123/311 (39%), Positives = 191/311 (61%), Gaps = 11/311 (3%)
Query: 102 FVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAE 161
+V +S++ Y G VA A +F ++P + L WN++I G+ +NG E AL + EM ++
Sbjct: 24 YVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSK 83
Query: 162 GFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA 221
G +PD FT+VS+LSACA++G L GK++H + LT N + L+D+YA+CG + A
Sbjct: 84 GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 143
Query: 222 RLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLN-IRPDAITFLTVLSACAH 280
+ +F+ +N W ++I G A+NG +E +E F ME+ + P ITF+ +L AC+H
Sbjct: 144 KTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSH 203
Query: 281 GGLLSEALEVISKM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLG 339
G++ E E +M E Y IE I+H+GCMVDLL RAG++K+AY+ IK MPM+PN +
Sbjct: 204 CGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWR 263
Query: 340 AMLGACRTHSDMKMAE----QVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGI 395
+LGAC H D +AE Q+++L +S VLLSN+YA+ ++W +K+R
Sbjct: 264 TLLGACTVHGDSDLAEFARIQILQLEPNHS-----GDYVLLSNMYASEQRWSDVQKIRKQ 318
Query: 396 MVDGESEKIAG 406
M+ +K+ G
Sbjct: 319 MLRDGVKKVPG 329
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 129/273 (47%), Gaps = 15/273 (5%)
Query: 6 VVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPH 65
+ N+++ Y GD+ SA VF++MP K V W+ +I GFA NG A L+ E
Sbjct: 23 IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM-- 80
Query: 66 ELKGV----VTWTVMVDGYARKGEMEAAREVFELMPE----RNCFVWSSMVSGYCKKGSV 117
KG+ T ++ A+ G + + V M + RN + ++ Y + G V
Sbjct: 81 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 140
Query: 118 AEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRA-EGFEPDEFTVVSVLSA 176
EA+T+F + ++ W ++I G NGFG+ A++ F+ M + EG P E T V +L A
Sbjct: 141 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 200
Query: 177 CAQLGLLDAG-KQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT-QRNIC 234
C+ G++ G + M E ++ +VD+ A+ G + A + Q N+
Sbjct: 201 CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVV 260
Query: 235 CWNAMISGFAINGKCREVLEFFGRMENLNIRPD 267
W ++ ++G L F R++ L + P+
Sbjct: 261 IWRTLLGACTVHGDSD--LAEFARIQILQLEPN 291
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 82/148 (55%), Gaps = 8/148 (5%)
Query: 186 GKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAI 245
G+ IH ++ +V + L+ +YA CGD+ +A VF+ ++++ WN++I+GFA
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 246 NGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKH 305
NGK E L + M + I+PD T +++LSACA G AL + ++ Y I++G+
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIG----ALTLGKRVHVYMIKVGLTR 122
Query: 306 ----YGCMVDLLGRAGRLKEAYDLIKRM 329
++DL R GR++EA L M
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDEM 150
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 18/190 (9%)
Query: 4 RNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE- 62
RN+ + N ++ Y R G +E A +F+EM K V+W+ +I G A NG A LF
Sbjct: 122 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 181
Query: 63 ------APHELKGV-VTWTVMVDGYARKG--EMEAAREVFELMPERNCFVWSSMVSGYCK 113
P E+ V + + G ++G RE +++ P F MV +
Sbjct: 182 ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHF--GCMVDLLAR 239
Query: 114 KGSVAEAETIFGRIPVR-SLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD---EFT 169
G V +A +P++ ++ IW T++ + G+ L F ++ EP+ ++
Sbjct: 240 AGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH--GDSDLAEFARIQILQLEPNHSGDYV 297
Query: 170 VVSVLSACAQ 179
++S + A Q
Sbjct: 298 LLSNMYASEQ 307
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 238 bits (607), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 146/421 (34%), Positives = 218/421 (51%), Gaps = 40/421 (9%)
Query: 10 NAMISGYMRNGDMESASLVFEEMP--GKTGVTWSQMIGGFARNGDTATARRLFDEAPHEL 67
A+IS Y + G + A VFEE P + V ++ +I G+ N A +F
Sbjct: 92 TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETG 151
Query: 68 KGVVTWTVM-----------------VDGYARKGEMEAAREVFELMPERNCFVWSSMVSG 110
V + T++ + G KG +++ V +S ++
Sbjct: 152 VSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVL-----------NSFITM 200
Query: 111 YCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
Y K GSV +F +PV+ L WN +I+GY QNG L+ +E+M++ G PD FT+
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ 230
VSVLS+CA LG G ++ ++E N FV + + MYA+CG+L AR VF+
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV 320
Query: 231 RNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEV 290
+++ W AMI + ++G L F M IRPD F+ VLSAC+H GL + LE+
Sbjct: 321 KSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL 380
Query: 291 ISKME-AYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHS 349
M+ Y +E G +HY C+VDLLGRAGRL EA + I+ MP+EP+ V GA+LGAC+ H
Sbjct: 381 FRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHK 440
Query: 350 DMKMAE----QVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIA 405
++ MAE +VI+ N + VL+SNIY+ S+ E ++R +M + K
Sbjct: 441 NVDMAELAFAKVIEFEPNNI-----GYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKP 495
Query: 406 G 406
G
Sbjct: 496 G 496
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 134/282 (47%), Gaps = 10/282 (3%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
+ V N+ I+ YM+ G +E+ +F+EMP K +TW+ +I G+++NG L+++
Sbjct: 188 DSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQ 247
Query: 63 APHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKGS 116
T ++ A G + EV +L+ N FV ++ +S Y + G+
Sbjct: 248 MKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGN 307
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+A+A +F +PV+SL W MI Y +G GE L F++M G PD V VLSA
Sbjct: 308 LAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSA 367
Query: 177 CAQLGLLDAGKQIHHMIEHK-RLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF-TQRNIC 234
C+ GL D G ++ ++ + +L P S LVD+ + G L A E + +
Sbjct: 368 CSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGA 427
Query: 235 CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLS 276
W A++ I+ F ++ + P+ I + ++S
Sbjct: 428 VWGALLGACKIHKNVDMAELAFAKV--IEFEPNNIGYYVLMS 467
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 127/302 (42%), Gaps = 44/302 (14%)
Query: 135 WNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIE 194
WN + ++ + M G PD F+ +L +CA L L +G+Q+H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 195 HKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRN--ICCWNAMISGFAINGKCREV 252
PFVL+ L+ MY KCG + +AR VFE Q + C+NA+ISG+ N K +
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 253 LEFFGRMENLNIRPDAITFLTVLS----------------ACAHGGLLSEALEVISKMEA 296
F RM+ + D++T L ++ C GGL SE + S +
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 297 Y----AIEMGIKHYGCM--------------VDLLGRAGRLKEAYDLIKRMPMEPNETVL 338
Y ++E G + + M G A + E Y+ +K + P+ L
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 339 GAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSN----IYAASEKWEKAEKMRG 394
++L +C K+ +V KL+ +N NV +SN +YA KA +
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVP----NVFVSNASISMYARCGNLAKARAVFD 316
Query: 395 IM 396
IM
Sbjct: 317 IM 318
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 238 bits (607), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 134/418 (32%), Positives = 226/418 (54%), Gaps = 25/418 (5%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKT-----GVTWSQMIGGFARNGDTATARRL 59
NV +N++I Y N +++++ K+ T+ M A G +++
Sbjct: 72 NVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQV 131
Query: 60 ------FDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCK 113
F H VVT ++D Y + ++ A +VF+ M ER+ W+S++SGY +
Sbjct: 132 HGHLCKFGPRFH----VVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYAR 187
Query: 114 KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSV 173
G + +A+ +F + +++ W MI+GY G A+ F EM+ G EPDE +++SV
Sbjct: 188 LGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISV 247
Query: 174 LSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNI 233
L +CAQLG L+ GK IH E + V + L++MY+KCG + A +F +++
Sbjct: 248 LPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDV 307
Query: 234 CCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISK 293
W+ MISG+A +G +E F M+ ++P+ ITFL +LSAC+H G+ E L
Sbjct: 308 ISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDM 367
Query: 294 M-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMK 352
M + Y IE I+HYGC++D+L RAG+L+ A ++ K MPM+P+ + G++L +CRT ++
Sbjct: 368 MRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLD 427
Query: 353 MAEQVIKLIGTNSITRADSHN----VLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
+A L+ + + + + VLL+NIYA KWE ++R ++ + +K G
Sbjct: 428 VA-----LVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPG 480
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 123/232 (53%), Gaps = 15/232 (6%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
M ER+V++WN+++SGY R G M+ A +F M KT V+W+ MI G+ G A F
Sbjct: 170 MYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFF 229
Query: 61 DEAPHELKGV----VTWTVMVDGYARKGEMEAAREVFELMPERNCF-----VWSSMVSGY 111
E +L G+ ++ ++ A+ G +E + + L ER F V ++++ Y
Sbjct: 230 REM--QLAGIEPDEISLISVLPSCAQLGSLELGKWI-HLYAERRGFLKQTGVCNALIEMY 286
Query: 112 CKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVV 171
K G +++A +FG++ + + W+TMI+GY +G A++ F EM+ +P+ T +
Sbjct: 287 SKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFL 346
Query: 172 SVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFV--LSGLVDMYAKCGDLVNA 221
+LSAC+ +G+ G + M+ + + P + L+D+ A+ G L A
Sbjct: 347 GLLSACSHVGMWQEGLRYFDMMR-QDYQIEPKIEHYGCLIDVLARAGKLERA 397
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 124/267 (46%), Gaps = 40/267 (14%)
Query: 99 RNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEM 158
++ F+ + MV K + A +F ++ ++ ++N++I Y N ++ ++++
Sbjct: 40 QSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQL 99
Query: 159 RAEGFE-PDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGD 217
+ FE PD FT + +CA LG GKQ+H + + + L+DMY K D
Sbjct: 100 LRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDD 159
Query: 218 LVNARLVFEGFTQRNICCWNAMISGFAINGKCR--------------------------- 250
LV+A VF+ +R++ WN+++SG+A G+ +
Sbjct: 160 LVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGI 219
Query: 251 ----EVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMG-IKH 305
E ++FF M+ I PD I+ ++VL +CA G +LE+ + YA G +K
Sbjct: 220 GCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLG----SLELGKWIHLYAERRGFLKQ 275
Query: 306 YG---CMVDLLGRAGRLKEAYDLIKRM 329
G ++++ + G + +A L +M
Sbjct: 276 TGVCNALIEMYSKCGVISQAIQLFGQM 302
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 238 bits (606), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 142/405 (35%), Positives = 220/405 (54%), Gaps = 11/405 (2%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF------DEA 63
A+I Y RN M+ A ++FE V W+ M+ G+ ++ D +LF E
Sbjct: 456 TALIDAYSRNRCMKEAEILFERHNFDL-VAWNAMMAGYTQSHDGHKTLKLFALMHKQGER 514
Query: 64 PHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETI 123
+ + +A + + + + +V S ++ Y K G ++ A+
Sbjct: 515 SDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFA 574
Query: 124 FGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLL 183
F IPV W TMI+G ++NG ERA F +MR G PDEFT+ ++ A + L L
Sbjct: 575 FDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTAL 634
Query: 184 DAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGF 243
+ G+QIH T +PFV + LVDMYAKCG + +A +F+ NI WNAM+ G
Sbjct: 635 EQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGL 694
Query: 244 AINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA-YAIEMG 302
A +G+ +E L+ F +M++L I+PD +TF+ VLSAC+H GL+SEA + + M Y I+
Sbjct: 695 AQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPE 754
Query: 303 IKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQV-IKLI 361
I+HY C+ D LGRAG +K+A +LI+ M ME + ++ +L ACR D + ++V KL+
Sbjct: 755 IEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLL 814
Query: 362 GTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
+ S VLLSN+YAA+ KW++ + R +M + +K G
Sbjct: 815 ELEPLD--SSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPG 857
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 168/368 (45%), Gaps = 31/368 (8%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKG 69
N++I+ Y + A VF+ M + ++W+ +I G A+NG A LF +
Sbjct: 354 NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQ------- 406
Query: 70 VVTWTVMVDGYARKGEMEAAREVFE--------------LMPERNCFVWSSMVSGYCKKG 115
++ + D Y ++AA + E + + FV ++++ Y +
Sbjct: 407 LLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNR 466
Query: 116 SVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLS 175
+ EAE +F R L WN M+AGY Q+ G + L+ F M +G D+FT+ +V
Sbjct: 467 CMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFK 525
Query: 176 ACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICC 235
C L ++ GKQ+H ++ +V SG++DMY KCGD+ A+ F+ +
Sbjct: 526 TCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVA 585
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKME 295
W MISG NG+ F +M + + PD T T+ A + ALE ++
Sbjct: 586 WTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASS----CLTALEQGRQIH 641
Query: 296 AYAIEMGIKHY----GCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDM 351
A A+++ + +VD+ + G + +AY L KR+ M N T AML H +
Sbjct: 642 ANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAMLVGLAQHGEG 700
Query: 352 KMAEQVIK 359
K Q+ K
Sbjct: 701 KETLQLFK 708
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 166/411 (40%), Gaps = 89/411 (21%)
Query: 2 PERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTAT-----A 56
PER ++ N +IS Y + G + A VF++MP + V+W+ ++ +A++ + A
Sbjct: 72 PERFLI--NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQA 129
Query: 57 RRLFDEAPHE----------------LKGVVTWT---------------------VMVDG 79
LF + L W +V+
Sbjct: 130 FLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNI 189
Query: 80 YARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETI---------------- 123
Y + G+++ + +FE MP R+ +W+ M+ Y + G EA +
Sbjct: 190 YLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Query: 124 --FGRIP--------------------VRSLEIWNTMIAGYVQNGFGERALQAFEEMRAE 161
RI V + N ++ Y+ +G L+ F +M
Sbjct: 250 RLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVES 309
Query: 162 GFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA 221
E D+ T + +L+ ++ L G+Q+H M L + V + L++MY K A
Sbjct: 310 DVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFA 369
Query: 222 RLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHG 281
R VF+ ++R++ WN++I+G A NG E + F ++ ++PD T +VL A +
Sbjct: 370 RTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS- 428
Query: 282 GLLSEALEVISKMEAYAIEMGIKHYG----CMVDLLGRAGRLKEAYDLIKR 328
L E L + ++ +AI++ ++D R +KEA L +R
Sbjct: 429 --LPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER 477
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 7/185 (3%)
Query: 92 VFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFG--- 148
FE PER F+ ++++S Y K GS+ A +F ++P R L WN+++A Y Q+
Sbjct: 67 TFEENPER--FLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVE 124
Query: 149 --ERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLS 206
++A F +R + T+ +L C G + A + H L + FV
Sbjct: 125 NIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAG 184
Query: 207 GLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRP 266
LV++Y K G + +++FE R++ WN M+ + G E ++ + + P
Sbjct: 185 ALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNP 244
Query: 267 DAITF 271
+ IT
Sbjct: 245 NEITL 249
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 92/211 (43%), Gaps = 52/211 (24%)
Query: 4 RNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEA 63
RN +T + ++ G + + L FEE P + + + +I +++ G ARR+FD+
Sbjct: 47 RNAITSSDLMLGKCTHARI----LTFEENPERFLI--NNLISMYSKCGSLTYARRVFDKM 100
Query: 64 PHELKGVVTWTVMVDGYARKGE-----MEAAREVFELMPE------------------RN 100
P + +V+W ++ YA+ E ++ A +F ++ + +
Sbjct: 101 PD--RDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHS 158
Query: 101 CFVWSS---------------------MVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMI 139
+VW+S +V+ Y K G V E + +F +P R + +WN M+
Sbjct: 159 GYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLML 218
Query: 140 AGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
Y++ GF E A+ + G P+E T+
Sbjct: 219 KAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 84/173 (48%), Gaps = 23/173 (13%)
Query: 201 NP--FVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKC-----REVL 253
NP F+++ L+ MY+KCG L AR VF+ R++ WN++++ +A + +C ++
Sbjct: 71 NPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAF 130
Query: 254 EFFGRMENLNIRPDAITFLTVLSACAHGGLL--SEALEVISKMEAYAIEMGIKH----YG 307
F + + +T +L C H G + SE+ YA ++G+ G
Sbjct: 131 LLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESF------HGYACKIGLDGDEFVAG 184
Query: 308 CMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKL 360
+V++ + G++KE L + MP + VL ++ + + +M E+ I L
Sbjct: 185 ALVNIYLKFGKVKEGKVLFEEMPYR--DVVLWNLM--LKAYLEMGFKEEAIDL 233
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 144/434 (33%), Positives = 227/434 (52%), Gaps = 32/434 (7%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKT----GVTWSQMIGGFARNG----D 52
M ++VV+WNAM++GY + G E A +FE+M + VTWS I G+A+ G
Sbjct: 290 MSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEA 349
Query: 53 TATARRLFDEA--PHELKGVVTWTVMVDGYARKGEMEAAREV------FELMPERN---- 100
R++ P+E VT ++ G A G + +E+ + + +N
Sbjct: 350 LGVCRQMLSSGIKPNE----VTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGD 405
Query: 101 -CFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEI--WNTMIAGYVQNGFGERALQAFEE 157
V + ++ Y K V A +F + + ++ W MI GY Q+G +AL+ E
Sbjct: 406 ENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSE 465
Query: 158 MRAEGFE--PDEFTVVSVLSACAQLGLLDAGKQIH-HMIEHKRLTVNPFVLSGLVDMYAK 214
M E + P+ FT+ L ACA L L GKQIH + + +++ V FV + L+DMYAK
Sbjct: 466 MFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAK 525
Query: 215 CGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTV 274
CG + +ARLVF+ +N W ++++G+ ++G E L F M + + D +T L V
Sbjct: 526 CGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVV 585
Query: 275 LSACAHGGLLSEALEVISKMEA-YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEP 333
L AC+H G++ + +E ++M+ + + G +HY C+VDLLGRAGRL A LI+ MPMEP
Sbjct: 586 LYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEP 645
Query: 334 NETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMR 393
V A L CR H +++ E + I T + D LLSN+YA + +W+ ++R
Sbjct: 646 PPVVWVAFLSCCRIHGKVELGEYAAEKI-TELASNHDGSYTLLSNLYANAGRWKDVTRIR 704
Query: 394 GIMVDGESEKIAGC 407
+M +K GC
Sbjct: 705 SLMRHKGVKKRPGC 718
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 184/396 (46%), Gaps = 63/396 (15%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
NV NA+++ Y R + A VF+EM V+W+ +I +A+ G A +F
Sbjct: 161 NVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMT 220
Query: 65 HE--------------------------------------LKGVVTWTVMVDGYARKGEM 86
+E ++ + +VD YA+ G M
Sbjct: 221 NEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMM 280
Query: 87 EAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEI----WNTMIAGY 142
+ A VF M ++ W++MV+GY + G +A +F ++ +++ W+ I+GY
Sbjct: 281 DEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGY 340
Query: 143 VQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIH-HMIEHK-RLTV 200
Q G G AL +M + G +P+E T++SVLS CA +G L GK+IH + I++ L
Sbjct: 341 AQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRK 400
Query: 201 N-----PFVLSGLVDMYAKCGDLVNARLVFEGFT--QRNICCWNAMISGFAINGKCREVL 253
N V++ L+DMYAKC + AR +F+ + +R++ W MI G++ +G + L
Sbjct: 401 NGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKAL 460
Query: 254 EFFGRM--ENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIE-----MGIKHY 306
E M E+ RP+A T L ACA AL + ++ AYA+ + +
Sbjct: 461 ELLSEMFEEDCQTRPNAFTISCALVACASLA----ALRIGKQIHAYALRNQQNAVPLFVS 516
Query: 307 GCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAML 342
C++D+ + G + +A + M M NE +++
Sbjct: 517 NCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLM 551
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 149/305 (48%), Gaps = 23/305 (7%)
Query: 12 MISGYMRNGDMESA-SLVFEEMPGKTGVT-WSQMIGGFARNGDTATARRLFDEAPHELKG 69
+IS Y+ G + A SL+ P GV W+ +I + NG LF L
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFG-----LMH 119
Query: 70 VVTWTVMVDGYARK------GEMEAAR-----EVFELMPE--RNCFVWSSMVSGYCKKGS 116
++WT D Y GE+ + R L+ N FV +++V+ Y + S
Sbjct: 120 SLSWTP--DNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRS 177
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAE-GFEPDEFTVVSVLS 175
+++A +F + V + WN++I Y + G + AL+ F M E G PD T+V+VL
Sbjct: 178 LSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLP 237
Query: 176 ACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICC 235
CA LG GKQ+H + N FV + LVDMYAKCG + A VF + +++
Sbjct: 238 PCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVS 297
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKME 295
WNAM++G++ G+ + + F +M+ I+ D +T+ +S A GL EAL V +M
Sbjct: 298 WNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML 357
Query: 296 AYAIE 300
+ I+
Sbjct: 358 SSGIK 362
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 111/233 (47%), Gaps = 7/233 (3%)
Query: 105 SSMVSGYCKKGSVAEAETIFGRIPVRSLEI--WNTMIAGYVQNGFGERALQAFEEMRAEG 162
S ++S Y G ++ A ++ R P + WN++I Y NG + L F M +
Sbjct: 63 SHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLS 122
Query: 163 FEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNAR 222
+ PD +T V AC ++ + G+ H + N FV + LV MY++C L +AR
Sbjct: 123 WTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDAR 182
Query: 223 LVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMEN-LNIRPDAITFLTVLSACAHG 281
VF+ + ++ WN++I +A GK + LE F RM N RPD IT + VL CA
Sbjct: 183 KVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASL 242
Query: 282 GL--LSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME 332
G L + L + M + + C+VD+ + G + EA + M ++
Sbjct: 243 GTHSLGKQLHCFAVTSEMIQNMFVGN--CLVDMYAKCGMMDEANTVFSNMSVK 293
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 140/435 (32%), Positives = 230/435 (52%), Gaps = 43/435 (9%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGD-------- 52
MPERN+VTWN M++GY + G +E A +F+++ K V+W MI G R
Sbjct: 234 MPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYY 293
Query: 53 -------------------TATARRLFDEAPHELKGVVT----------WTVMVDGYARK 83
+A+AR + +L G + ++ YA
Sbjct: 294 TEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVS 353
Query: 84 GEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYV 143
+++ A + FE + + +++++G+ K G V +A +F + + + WN MI+GY
Sbjct: 354 NDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYA 413
Query: 144 QNGFGERALQAFEEM-RAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNP 202
Q+ + AL F EM + +PD T+VSV SA + LG L+ GK+ H + + N
Sbjct: 414 QSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPND 473
Query: 203 FVLSGLVDMYAKCGDLVNARLVF---EGFTQRNICCWNAMISGFAINGKCREVLEFFGRM 259
+ + ++DMYAKCG + A +F + + I WNA+I G A +G + L+ + +
Sbjct: 474 NLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDL 533
Query: 260 ENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA-YAIEMGIKHYGCMVDLLGRAGR 318
++L I+P++ITF+ VLSAC H GL+ M++ + IE IKHYGCMVDLLG+AGR
Sbjct: 534 QSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGR 593
Query: 319 LKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSN 378
L+EA ++IK+MP++ + + G +L A RTH ++++AE + + V+LSN
Sbjct: 594 LEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGC-KVMLSN 652
Query: 379 IYAASEKWEKAEKMR 393
+YA + +WE +R
Sbjct: 653 VYADAGRWEDVALVR 667
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 187/438 (42%), Gaps = 80/438 (18%)
Query: 8 TWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE----- 62
++N M+ GY+R+ + A +F+ MP ++ V+++ +I G+A+N + A LF E
Sbjct: 109 SFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLG 168
Query: 63 -------------APHELKGVVTWTV-MVDGYARKGEMEA-------------------- 88
A L G+ W M+ A K ++E
Sbjct: 169 IMLNEVTLATVISACSHLGGI--WDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKD 226
Query: 89 AREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFG 148
AR++F+ MPERN W+ M++GY K G + +AE +F +I + + W TMI G ++
Sbjct: 227 ARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQL 286
Query: 149 ERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGL 208
+ AL + EM G +P E +V +LSA A+ G Q+H I + F+ + +
Sbjct: 287 DEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATI 346
Query: 209 VDMYAKCGDLV-------------------------------NARLVFEGFTQRNICCWN 237
+ YA D+ AR VF+ ++I WN
Sbjct: 347 IHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWN 406
Query: 238 AMISGFAINGKCREVLEFFGRM-ENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA 296
AMISG+A + + L F M + ++PDAIT ++V SA + G L E +
Sbjct: 407 AMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNF 466
Query: 297 YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETV--LGAMLGACRTHSDMKMA 354
I ++D+ + G ++ A ++ + + T+ A++ TH K+A
Sbjct: 467 STIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLA 526
Query: 355 EQVIK-----LIGTNSIT 367
+ I NSIT
Sbjct: 527 LDLYSDLQSLPIKPNSIT 544
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 122/244 (50%), Gaps = 9/244 (3%)
Query: 76 MVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIW 135
+++ YA+ + A VF + + ++ MV GY + + +A +F +P RS +
Sbjct: 82 VLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSY 141
Query: 136 NTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEH 195
T+I GY QN A++ F EMR G +E T+ +V+SAC+ LG + + + +
Sbjct: 142 TTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIK 201
Query: 196 KRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEF 255
+L FV + L+ MY C L +AR +F+ +RN+ WN M++G++ G + E
Sbjct: 202 LKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEEL 261
Query: 256 FGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGC-MVDLLG 314
F ++ D +++ T++ C L EAL ++M + G+K MVDLL
Sbjct: 262 FDQI----TEKDIVSWGTMIDGCLRKNQLDEALVYYTEM----LRCGMKPSEVMMVDLLS 313
Query: 315 RAGR 318
+ R
Sbjct: 314 ASAR 317
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 101/237 (42%), Gaps = 44/237 (18%)
Query: 167 EFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVF- 225
E +VS L +CA + G+QIH + L N ++ + +++MYAKC L +A VF
Sbjct: 41 ERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFR 100
Query: 226 --------------EGFT----------------QRNICCWNAMISGFAINGKCREVLEF 255
+G+ +R+ + +I G+A N + E +E
Sbjct: 101 DHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMEL 160
Query: 256 FGRMENLNIRPDAITFLTVLSACAH-GGL----LSEALEVISKMEAYA-IEMGIKHYGCM 309
F M NL I + +T TV+SAC+H GG+ + ++L + K+E + + H C+
Sbjct: 161 FREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCL 220
Query: 310 VDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSI 366
LK+A L MP E N ML ++ AE++ I I
Sbjct: 221 CLC------LKDARKLFDEMP-ERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDI 270
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 235 bits (599), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 151/419 (36%), Positives = 221/419 (52%), Gaps = 26/419 (6%)
Query: 5 NVVTWNAMISGYMRNGD-MESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATAR-- 57
NV+ +NAMI Y G +ES S F M + T++ ++ + D +
Sbjct: 66 NVLVFNAMIKCYSLVGPPLESLSF-FSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCV 124
Query: 58 --RLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKG 115
L H L + V + Y G M A++VF+ M ERN VW+ M+ G+C G
Sbjct: 125 HGELIRTGFHRLGKIRIGVVEL--YTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSG 182
Query: 116 SVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLS 175
V +F ++ RS+ WN+MI+ + G AL+ F EM +GF+PDE TVV+VL
Sbjct: 183 DVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLP 242
Query: 176 ACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSG--LVDMYAKCGDLVNARLVFEGFTQRNI 233
A LG+LD GK IH E L F+ G LVD Y K GDL A +F +RN+
Sbjct: 243 ISASLGVLDTGKWIHSTAESSGL-FKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNV 301
Query: 234 CCWNAMISGFAINGKCREVLEFFGRM-ENLNIRPDAITFLTVLSACAHGGLLSEALEVIS 292
WN +ISG A+NGK ++ F M E + P+ TFL VL+ C++ G + E+
Sbjct: 302 VSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFG 361
Query: 293 -KMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDM 351
ME + +E +HYG MVDL+ R+GR+ EA+ +K MP+ N + G++L ACR+H D+
Sbjct: 362 LMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDV 421
Query: 352 KMAE----QVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
K+AE +++K+ NS + VLLSN+YA +W+ EK+R +M K G
Sbjct: 422 KLAEVAAMELVKIEPGNS-----GNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTG 475
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 152/335 (45%), Gaps = 54/335 (16%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
M ERNVV WN MI G+ +GD+E +F++M ++ V+W+ MI ++ G A LF
Sbjct: 163 MSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELF 222
Query: 61 DEA------PHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCF-----VWSSMVS 109
E P E V + A G ++ + + F V +++V
Sbjct: 223 CEMIDQGFDPDEATVVTVLPI----SASLGVLDTGKWIHSTAESSGLFKDFITVGNALVD 278
Query: 110 GYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEG-FEPDEF 168
YCK G + A IF ++ R++ WNT+I+G NG GE + F+ M EG P+E
Sbjct: 279 FYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEA 338
Query: 169 TVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF 228
T + VL+ C+ G ++ G+++ L+ R E
Sbjct: 339 TFLGVLACCSYTGQVERGEELF--------------------------GLMMERFKLEAR 372
Query: 229 TQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSAC-AHGGLLSEA 287
T+ + AM+ + +G+ E +F ++N+ + +A + ++LSAC +HG +
Sbjct: 373 TEH----YGAMVDLMSRSGRITEAFKF---LKNMPVNANAAMWGSLLSACRSHGDV---K 422
Query: 288 LEVISKMEAYAIEMGIK-HYGCMVDLLGRAGRLKE 321
L ++ ME IE G +Y + +L GR ++
Sbjct: 423 LAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQD 457
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 32/242 (13%)
Query: 120 AETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQ 179
A +F I ++ ++N MI Y G +L F M++ G DE+T +L +C+
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS 114
Query: 180 LGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAM 239
L L GK +H + + G+V++Y G + +A+ VF+ ++RN+ WN M
Sbjct: 115 LSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLM 174
Query: 240 ISGFAING----------------------------KC---REVLEFFGRMENLNIRPDA 268
I GF +G KC RE LE F M + PD
Sbjct: 175 IRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDE 234
Query: 269 ITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYG-CMVDLLGRAGRLKEAYDLIK 327
T +TVL A G+L + S E+ + G +VD ++G L+ A + +
Sbjct: 235 ATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFR 294
Query: 328 RM 329
+M
Sbjct: 295 KM 296
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 234 bits (598), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 130/393 (33%), Positives = 214/393 (54%), Gaps = 10/393 (2%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHE--L 67
N++++ Y ++ + A +F+ + K ++WS +I + +NG A A +F++ +
Sbjct: 202 NSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTE 261
Query: 68 KGVVTWTVMVDGYARKGEMEAAREVFELMP----ERNCFVWSSMVSGYCKKGSVAEAETI 123
V T ++ A ++E R+ EL E V +++V Y K S EA +
Sbjct: 262 PNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAV 321
Query: 124 FGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEG-FEPDEFTVVSVLSACAQLGL 182
F RIP + + W +I+G+ NG R+++ F M E PD +V VL +C++LG
Sbjct: 322 FSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGF 381
Query: 183 LDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISG 242
L+ K H + NPF+ + LV++Y++CG L NA VF G ++ W ++I+G
Sbjct: 382 LEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITG 441
Query: 243 FAINGKCREVLEFFGRM-ENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYAIE 300
+ I+GK + LE F M ++ ++P+ +TFL++LSAC+H GL+ E L + M Y +
Sbjct: 442 YGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLA 501
Query: 301 MGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKL 360
++HY +VDLLGR G L A ++ KRMP P +LG +LGACR H + +MAE V K
Sbjct: 502 PNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKK 561
Query: 361 IGTNSITRADSHNVLLSNIYAASEKWEKAEKMR 393
+ A + +L+SN+Y +WE EK+R
Sbjct: 562 LFELESNHA-GYYMLMSNVYGVKGEWENVEKLR 593
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 154/326 (47%), Gaps = 18/326 (5%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF-------DE 62
+++I Y++ G M A +F+E+ VTWS M+ GF +NG A F D
Sbjct: 100 SSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDV 159
Query: 63 APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKGSVA 118
P VT +V + R V + R + + +S+++ Y K +
Sbjct: 160 TPDR----VTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFK 215
Query: 119 EAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACA 178
EA +F I + + W+T+IA YVQNG AL F +M +G EP+ TV+ VL ACA
Sbjct: 216 EAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACA 275
Query: 179 QLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNA 238
L+ G++ H + K L V + LVDMY KC A VF ++++ W A
Sbjct: 276 AAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVA 335
Query: 239 MISGFAINGKCREVLEFFGRM--ENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA 296
+ISGF +NG +E F M EN N RPDAI + VL +C+ G L +A S +
Sbjct: 336 LISGFTLNGMAHRSIEEFSIMLLEN-NTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIK 394
Query: 297 YAIEMGIKHYGCMVDLLGRAGRLKEA 322
Y + +V+L R G L A
Sbjct: 395 YGFDSNPFIGASLVELYSRCGSLGNA 420
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 96/173 (55%), Gaps = 3/173 (1%)
Query: 110 GYCKK-GSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEF 168
G+C+K S +A +FG + RSL WNT++ + E L F M + +PD F
Sbjct: 2 GFCRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNF 61
Query: 169 TVVSVLSACAQLGLLDAGKQIHHMIEHK-RLTVNPFVLSGLVDMYAKCGDLVNARLVFEG 227
T+ L AC +L ++ G+ IH ++ L + +V S L+ MY KCG ++ A +F+
Sbjct: 62 TLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDE 121
Query: 228 FTQRNICCWNAMISGFAINGKCREVLEFFGRM-ENLNIRPDAITFLTVLSACA 279
+ +I W++M+SGF NG + +EFF RM ++ PD +T +T++SAC
Sbjct: 122 LEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT 174
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 125/261 (47%), Gaps = 11/261 (4%)
Query: 71 VTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVR 130
V + M+ G+ +K ++ + +V SS++ Y K G + EA +F +
Sbjct: 76 VNYGEMIHGFVKK----------DVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 131 SLEIWNTMIAGYVQNGFGERALQAFEEM-RAEGFEPDEFTVVSVLSACAQLGLLDAGKQI 189
+ W++M++G+ +NG +A++ F M A PD T+++++SAC +L G+ +
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCV 185
Query: 190 HHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKC 249
H + + + + +++ L++ YAK A +F+ ++++ W+ +I+ + NG
Sbjct: 186 HGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAA 245
Query: 250 REVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCM 309
E L F M + P+ T L VL ACA L + + +E +K +
Sbjct: 246 AEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTAL 305
Query: 310 VDLLGRAGRLKEAYDLIKRMP 330
VD+ + +EAY + R+P
Sbjct: 306 VDMYMKCFSPEEAYAVFSRIP 326
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 15/231 (6%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
E V A++ YM+ E A VF +P K V+W +I GF NG A R +E
Sbjct: 296 ETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNG---MAHRSIEE 352
Query: 63 APHEL------KGVVTWTVMVDGYARKGEMEAAR----EVFELMPERNCFVWSSMVSGYC 112
L + ++ + G +E A+ V + + N F+ +S+V Y
Sbjct: 353 FSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYS 412
Query: 113 KKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEM-RAEGFEPDEFTVV 171
+ GS+ A +F I ++ +W ++I GY +G G +AL+ F M ++ +P+E T +
Sbjct: 413 RCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFL 472
Query: 172 SVLSACAQLGLLDAGKQIHH-MIEHKRLTVNPFVLSGLVDMYAKCGDLVNA 221
S+LSAC+ GL+ G +I M+ RL N + LVD+ + GDL A
Sbjct: 473 SILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTA 523
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 125/354 (35%), Positives = 210/354 (59%), Gaps = 18/354 (5%)
Query: 60 FDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAE 119
FD + H + G ++ Y G + AR++F+ M ++ VW+++++GY K G + E
Sbjct: 147 FDSSVHVVTG------LIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDE 200
Query: 120 AETIFGRIP--VRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSAC 177
A ++ +P VR+ W +I+GY ++G A++ F+ M E EPDE T+++VLSAC
Sbjct: 201 ARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSAC 260
Query: 178 AQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWN 237
A LG L+ G++I ++H+ + + + ++DMYAK G++ A VFE +RN+ W
Sbjct: 261 ADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWT 320
Query: 238 AMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA- 296
+I+G A +G E L F RM +RP+ +TF+ +LSAC+H G + + + M +
Sbjct: 321 TIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSK 380
Query: 297 YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAE- 355
Y I I+HYGCM+DLLGRAG+L+EA ++IK MP + N + G++L A H D+++ E
Sbjct: 381 YGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGER 440
Query: 356 ---QVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
++IKL NS + +LL+N+Y+ +W+++ MR +M +K+AG
Sbjct: 441 ALSELIKLEPNNS-----GNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAG 489
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 128/257 (49%), Gaps = 20/257 (7%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPG--KTGVTWSQMIGGFARNGDTATARR 58
M ++V WNA+++GY + G+M+ A + E MP + V+W+ +I G+A++G + A
Sbjct: 177 MLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIE 236
Query: 59 LFDE------APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERN----CFVWSSMV 108
+F P E VT ++ A G +E + + R + ++++
Sbjct: 237 VFQRMLMENVEPDE----VTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVI 292
Query: 109 SGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEF 168
Y K G++ +A +F + R++ W T+IAG +G G AL F M G P++
Sbjct: 293 DMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDV 352
Query: 169 TVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFV--LSGLVDMYAKCGDLVNARLVFE 226
T +++LSAC+ +G +D GK++ + + K ++P + ++D+ + G L A V +
Sbjct: 353 TFIAILSACSHVGWVDLGKRLFNSMRSK-YGIHPNIEHYGCMIDLLGRAGKLREADEVIK 411
Query: 227 GFT-QRNICCWNAMISG 242
+ N W ++++
Sbjct: 412 SMPFKANAAIWGSLLAA 428
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 109/249 (43%), Gaps = 36/249 (14%)
Query: 115 GSVAEAETIFGRIPVRSLEIWNTMIAGYV---QNGFGERALQAFEEMRAEGFEPDEFTVV 171
G + A ++F P + + NTMI + A+ + ++ A +PD FT
Sbjct: 61 GHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFP 120
Query: 172 SVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQR 231
VL ++ + G+QIH + + V++GL+ MY CG L +AR +F+ +
Sbjct: 121 FVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVK 180
Query: 232 NICCWNAM---------------------------------ISGFAINGKCREVLEFFGR 258
++ WNA+ ISG+A +G+ E +E F R
Sbjct: 181 DVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQR 240
Query: 259 MENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGR 318
M N+ PD +T L VLSACA G L + S ++ + + ++D+ ++G
Sbjct: 241 MLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGN 300
Query: 319 LKEAYDLIK 327
+ +A D+ +
Sbjct: 301 ITKALDVFE 309
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 4 RNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEA 63
R V NA+I Y ++G++ A VFE + + VTW+ +I G A +G A A +F+
Sbjct: 283 RAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRM 342
Query: 64 ------PHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER-----NCFVWSSMVSGYC 112
P++ VT+ ++ + G ++ + +F M + N + M+
Sbjct: 343 VKAGVRPND----VTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLG 398
Query: 113 KKGSVAEAETIFGRIPVRS-LEIWNTMIAG---YVQNGFGERALQAFEEMRAEGFEPDEF 168
+ G + EA+ + +P ++ IW +++A + GERAL E ++ E +
Sbjct: 399 RAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALS--ELIKLEPNNSGNY 456
Query: 169 TVVSVLSACAQLGLLDAGKQIHHMIE 194
+++ L + LG D + + +M++
Sbjct: 457 MLLANLY--SNLGRWDESRMMRNMMK 480
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/420 (34%), Positives = 233/420 (55%), Gaps = 24/420 (5%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
+R++ T +++I Y + G ++ A VF +P + V+ + +I G+++N + A LF E
Sbjct: 561 DRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQE 619
Query: 63 APHELKGV----VTWTVMVDGYARKGEMEAAREVFELMPERNC-----FVWSSMVSGYCK 113
+GV +T+ +V+ + + + + +R ++ S++ Y
Sbjct: 620 ML--TRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMN 677
Query: 114 KGSVAEAETIFGRIPV-RSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVS 172
+ EA +F + +S+ +W M++G+ QNGF E AL+ ++EMR +G PD+ T V+
Sbjct: 678 SRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVT 737
Query: 173 VLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQR- 231
VL C+ L L G+ IH +I H ++ + L+DMYAKCGD+ + VF+ +R
Sbjct: 738 VLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRS 797
Query: 232 NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVI 291
N+ WN++I+G+A NG + L+ F M +I PD ITFL VL+AC+H G +S+ ++
Sbjct: 798 NVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIF 857
Query: 292 SKM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSD 350
M Y IE + H CMVDLLGR G L+EA D I+ ++P+ + ++LGACR H D
Sbjct: 858 EMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGD 917
Query: 351 ----MKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
AE++I+L NS S VLLSNIYA+ WEKA +R +M D +K+ G
Sbjct: 918 DIRGEISAEKLIELEPQNS-----SAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPG 972
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 162/371 (43%), Gaps = 45/371 (12%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARR 58
+ N V W + SGY++ G E A LVFE M + + + +I + R G AR
Sbjct: 223 DPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARL 282
Query: 59 LFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVF------------------------- 93
LF E VV W VM+ G+ ++G A E F
Sbjct: 283 LFGEMSS--PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIV 340
Query: 94 --------------ELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMI 139
+L N +V SS+VS Y K + A +F + ++ WN MI
Sbjct: 341 ANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMI 400
Query: 140 AGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLT 199
GY NG + ++ F +M++ G+ D+FT S+LS CA L+ G Q H +I K+L
Sbjct: 401 RGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLA 460
Query: 200 VNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRM 259
N FV + LVDMYAKCG L +AR +FE R+ WN +I + + E + F RM
Sbjct: 461 KNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM 520
Query: 260 ENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRL 319
I D + L AC H L + +V ++ + ++D+ + G +
Sbjct: 521 NLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGII 580
Query: 320 KEAYDLIKRMP 330
K+A + +P
Sbjct: 581 KDARKVFSSLP 591
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 165/347 (47%), Gaps = 24/347 (6%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGG-----FARNGDTATARRL 59
N T++ ++S R ++E + M K G+ + GG +A+ + ARR+
Sbjct: 159 NKFTFSIVLSTCARETNVEFGRQIHCSMI-KMGLERNSYCGGALVDMYAKCDRISDARRV 217
Query: 60 FDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELM------PERNCFVWSSMVSGYCK 113
F+ V WT + GY + G E A VFE M P+ FV ++++ Y +
Sbjct: 218 FEWIVD--PNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFV--TVINTYIR 273
Query: 114 KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSV 173
G + +A +FG + + WN MI+G+ + G A++ F MR + T+ SV
Sbjct: 274 LGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSV 333
Query: 174 LSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNI 233
LSA + LD G +H L N +V S LV MY+KC + A VFE ++N
Sbjct: 334 LSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKND 393
Query: 234 CCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISK 293
WNAMI G+A NG+ +V+E F M++ D TF ++LS CA S LE+ S+
Sbjct: 394 VFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCA----ASHDLEMGSQ 449
Query: 294 MEAYAIEMGIKHY----GCMVDLLGRAGRLKEAYDLIKRMPMEPNET 336
+ I+ + +VD+ + G L++A + +RM N T
Sbjct: 450 FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVT 496
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 156/346 (45%), Gaps = 23/346 (6%)
Query: 4 RNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEA 63
+N+ NA++ Y + G +E A +FE M + VTW+ +IG + ++ + + A LF
Sbjct: 461 KNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM 520
Query: 64 PHELKGVVTWTVMVDGYARKGEMEAAREVFELMP-------------ERNCFVWSSMVSG 110
L G+V+ DG ++A V L +R+ SS++
Sbjct: 521 --NLCGIVS-----DGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDM 573
Query: 111 YCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
Y K G + +A +F +P S+ N +IAGY QN E A+ F+EM G P E T
Sbjct: 574 YSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITF 632
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVN-PFVLSGLVDMYAKCGDLVNARLVFEGFT 229
+++ AC + L G Q H I + + ++ L+ MY + A +F +
Sbjct: 633 ATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELS 692
Query: 230 Q-RNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEAL 288
++I W M+SG + NG E L+F+ M + + PD TF+TVL C+ L E
Sbjct: 693 SPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGR 752
Query: 289 EVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPN 334
+ S + A ++ ++D+ + G +K + + M N
Sbjct: 753 AIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSN 798
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 124/284 (43%), Gaps = 38/284 (13%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATA 56
+ E+N V WNAMI GY NG+ +F +M T++ ++ A + D
Sbjct: 388 LEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG 447
Query: 57 RRLFDEAPHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKK 114
+ + K + +VD YA+ G +E AR++FE M +R+ W++++ Y +
Sbjct: 448 SQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQD 507
Query: 115 GSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVL 174
+ +EA +F R M G D + S L
Sbjct: 508 ENESEAFDLFKR-------------------------------MNLCGIVSDGACLASTL 536
Query: 175 SACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNIC 234
AC + L GKQ+H + L + S L+DMY+KCG + +AR VF + ++
Sbjct: 537 KACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVV 596
Query: 235 CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSAC 278
NA+I+G++ N E + F M + P ITF T++ AC
Sbjct: 597 SMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEAC 639
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 168/372 (45%), Gaps = 43/372 (11%)
Query: 56 ARRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKG 115
+R++FDE P L + R G+ ++ + L + + +++V Y K
Sbjct: 61 SRKVFDEMPQRLALAL----------RIGKAVHSKSLI-LGIDSEGRLGNAIVDLYAKCA 109
Query: 116 SVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLS 175
V+ AE F + + + WN+M++ Y G + L++F + P++FT VLS
Sbjct: 110 QVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLS 168
Query: 176 ACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICC 235
CA+ ++ G+QIH + L N + LVDMYAKC + +AR VFE N C
Sbjct: 169 TCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVC 228
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKME 295
W + SG+ G E + F RM + RPD + F+TV++ G L +A + +M
Sbjct: 229 WTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS 288
Query: 296 AYAIEMGIKHYGCMVDLLGRAGRLKEAYDL---IKRMPMEPNETVLGAMLGACRTHSDMK 352
+ + + M+ G+ G A + +++ ++ + LG++L A +++
Sbjct: 289 S----PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLD 344
Query: 353 MA----EQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEK----------------M 392
+ + IKL ++I S L ++Y+ EK E A K +
Sbjct: 345 LGLVVHAEAIKLGLASNIYVGSS----LVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMI 400
Query: 393 RGIMVDGESEKI 404
RG +GES K+
Sbjct: 401 RGYAHNGESHKV 412
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 136/396 (34%), Positives = 216/396 (54%), Gaps = 14/396 (3%)
Query: 22 MESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHE--LKGVVTWTVMVDG 79
M A +FE M V ++ M G++R + LF E + L T+ ++
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 80 YARKGEMEAAREV----FELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIW 135
A +E R++ +L + N +V ++++ Y + V A +F RI + +
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCY 198
Query: 136 NTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEH 195
N MI GY + AL F EM+ + +P+E T++SVLS+CA LG LD GK IH +
Sbjct: 199 NAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKK 258
Query: 196 KRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEF 255
V + L+DM+AKCG L +A +FE ++ W+AMI +A +GK + +
Sbjct: 259 HSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLM 318
Query: 256 FGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYAIEMGIKHYGCMVDLLG 314
F RM + N++PD ITFL +L+AC+H G + E + S+M + I IKHYG MVDLL
Sbjct: 319 FERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLS 378
Query: 315 RAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHN- 373
RAG L++AY+ I ++P+ P + +L AC +H+++ +AE+V + I DSH
Sbjct: 379 RAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERI----FELDDSHGG 434
Query: 374 --VLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
V+LSN+YA ++KWE + +R +M D ++ K+ GC
Sbjct: 435 DYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGC 470
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 119/235 (50%), Gaps = 1/235 (0%)
Query: 114 KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSV 173
+ S++ A +F + + I+N+M GY + F E+ +G PD +T S+
Sbjct: 76 ESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSL 135
Query: 174 LSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNI 233
L ACA L+ G+Q+H + L N +V L++MY +C D+ +AR VF+ + +
Sbjct: 136 LKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCV 195
Query: 234 CCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISK 293
C+NAMI+G+A + E L F M+ ++P+ IT L+VLS+CA G L +
Sbjct: 196 VCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKY 255
Query: 294 MEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTH 348
+ ++ +K ++D+ + G L +A + ++M + + AM+ A H
Sbjct: 256 AKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQA-WSAMIVAYANH 309
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 116/231 (50%), Gaps = 17/231 (7%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
+ NV +I+ Y D++SA VF+ + V ++ MI G+AR A LF E
Sbjct: 161 DDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFRE 220
Query: 63 ------APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCF-----VWSSMVSGY 111
P+E +T ++ A G ++ + + + +++ F V ++++ +
Sbjct: 221 MQGKYLKPNE----ITLLSVLSSCALLGSLDLGKWIHK-YAKKHSFCKYVKVNTALIDMF 275
Query: 112 CKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVV 171
K GS+ +A +IF ++ + + W+ MI Y +G E+++ FE MR+E +PDE T +
Sbjct: 276 AKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFL 335
Query: 172 SVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSG-LVDMYAKCGDLVNA 221
+L+AC+ G ++ G++ + K V G +VD+ ++ G+L +A
Sbjct: 336 GLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDA 386
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 231 bits (589), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 136/415 (32%), Positives = 224/415 (53%), Gaps = 26/415 (6%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTAT-----ARRLFDEA- 63
+ ++ Y+R G A +F+EMP + V+W+ +I G++ G +R + E
Sbjct: 70 DQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVG 129
Query: 64 --PHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCF----VWSSMVSGYCKKGSV 117
P+E VT+ M+ G E R + L+ + V ++ ++ Y K G +
Sbjct: 130 FRPNE----VTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDL 185
Query: 118 AEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSAC 177
+ +F + +++L WNTMI ++QNG E+ L F R G EPD+ T ++VL +C
Sbjct: 186 TSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSC 245
Query: 178 AQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWN 237
+G++ + IH +I + N + + L+D+Y+K G L ++ VF T + W
Sbjct: 246 EDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWT 305
Query: 238 AMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-EA 296
AM++ +A +G R+ ++ F M + I PD +TF +L+AC+H GL+ E M +
Sbjct: 306 AMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKR 365
Query: 297 YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKM--- 353
Y I+ + HY CMVDLLGR+G L++AY LIK MPMEP+ V GA+LGACR + D ++
Sbjct: 366 YRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTK 425
Query: 354 -AEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
AE++ +L R + V+LSNIY+AS W+ A ++R +M + +GC
Sbjct: 426 AAERLFEL-----EPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGC 475
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 126/262 (48%), Gaps = 7/262 (2%)
Query: 91 EVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGER 150
+V + + R+ F+ +V Y + G AE +F +P R L WN++I+GY G+ +
Sbjct: 56 KVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGK 115
Query: 151 ALQAFEEMRAE--GFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGL 208
+ M GF P+E T +S++SAC G + G+ IH ++ + V++
Sbjct: 116 CFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAF 175
Query: 209 VDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDA 268
++ Y K GDL ++ +FE + +N+ WN MI NG + L +F + PD
Sbjct: 176 INWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQ 235
Query: 269 ITFLTVLSACAHGGL--LSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLI 326
TFL VL +C G+ L++ + + ++ I ++DL + GRL+++ +
Sbjct: 236 ATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCIT--TALLDLYSKLGRLEDSSTVF 293
Query: 327 KRMPMEPNETVLGAMLGACRTH 348
+ P+ AML A TH
Sbjct: 294 HEIT-SPDSMAWTAMLAAYATH 314
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 231 bits (589), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 137/412 (33%), Positives = 216/412 (52%), Gaps = 10/412 (2%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
ER+V +++I Y + G + A +F+E+ + V+W+ MI G++ G A LF +
Sbjct: 164 ERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRK 223
Query: 63 APHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKGS 116
E T M+ + G++ R + E+ + + F+ S ++S Y K G
Sbjct: 224 MEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGD 283
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+ A +F ++ + W MI Y QNG A + F EM G PD T+ +VLSA
Sbjct: 284 LDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSA 343
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
C +G L+ GKQI L N +V +GLVDMY KCG + A VFE +N W
Sbjct: 344 CGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATW 403
Query: 237 NAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA 296
NAMI+ +A G +E L F RM ++ P ITF+ VLSAC H GL+ + +M +
Sbjct: 404 NAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSS 460
Query: 297 -YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAE 355
+ + I+HY ++DLL RAG L EA++ ++R P +P+E +L A+LGAC D+ + E
Sbjct: 461 MFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIRE 520
Query: 356 QVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
+ ++++ + + V+ SN+ A + W+++ KMR +M D K GC
Sbjct: 521 KAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGC 572
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/374 (32%), Positives = 192/374 (51%), Gaps = 23/374 (6%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARN-GDTATARRLFDEAPHELK 68
N +I + GD +S +F +++ MI G D A L+ +
Sbjct: 69 NFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRM--KFS 126
Query: 69 GV----VTWTVMVDGYARKGEMEAAREV----FELMPERNCFVWSSMVSGYCKKGSVAEA 120
G+ T+ + A+ E+ R V F++ ER+ + S++ Y K G V A
Sbjct: 127 GLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYA 186
Query: 121 ETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQL 180
+F I R WN+MI+GY + G+ + A+ F +M EGFEPDE T+VS+L AC+ L
Sbjct: 187 RKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHL 246
Query: 181 GLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMI 240
G L G+ + M K++ ++ F+ S L+ MY KCGDL +AR VF +++ W AMI
Sbjct: 247 GDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMI 306
Query: 241 SGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIE 300
+ ++ NGK E + F ME + PDA T TVLSAC G ALE+ ++E +A E
Sbjct: 307 TVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVG----ALELGKQIETHASE 362
Query: 301 MGIKH----YGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQ 356
+ ++H +VD+ G+ GR++EA + + MP++ NE AM+ A ++ A++
Sbjct: 363 LSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVK-NEATWNAMITA---YAHQGHAKE 418
Query: 357 VIKLIGTNSITRAD 370
+ L S+ +D
Sbjct: 419 ALLLFDRMSVPPSD 432
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 97/237 (40%), Gaps = 45/237 (18%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGV-----TWSQMIGGFARNGDTAT 55
M +++ V W AMI+ Y +NG A +F EM KTGV T S ++ G
Sbjct: 294 MIKKDRVAWTAMITVYSQNGKSSEAFKLFFEME-KTGVSPDAGTLSTVLSACGSVGALEL 352
Query: 56 ARRLFDEAPHELK---GVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYC 112
+++ A EL + T +VD Y + G +E A VFE MP +N W++M++ Y
Sbjct: 353 GKQIETHAS-ELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYA 411
Query: 113 KKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVS 172
+G EA +F R+ V P + T +
Sbjct: 412 HQGHAKEALLLFDRMSV----------------------------------PPSDITFIG 437
Query: 173 VLSACAQLGLLDAG-KQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF 228
VLSAC GL+ G + H M L + ++D+ ++ G L A E F
Sbjct: 438 VLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERF 494
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 141/415 (33%), Positives = 232/415 (55%), Gaps = 28/415 (6%)
Query: 10 NAMISGYMR-NGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELK 68
NAM++ Y + ME+A L+F ++ K VTW+ +I GF GD +++ + E
Sbjct: 150 NAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENA 209
Query: 69 GVVTW--TVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKGSVAEAET 122
V + T+ V A + +++ + +R N V +S++ YC+ G ++EA+
Sbjct: 210 EVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKH 269
Query: 123 IFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGL 182
F + + L WNT+I+ ++ E AL F+ ++GF P+ +T S+++ACA +
Sbjct: 270 YFHEMEDKDLITWNTLISELERSDSSE-ALLMFQRFESQGFVPNCYTFTSLVAACANIAA 328
Query: 183 LDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVF-EGFTQRNICCWNAMIS 241
L+ G+Q+H I + N + + L+DMYAKCG++ +++ VF E +RN+ W +M+
Sbjct: 329 LNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMI 388
Query: 242 GFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA-YAIE 300
G+ +G E +E F +M + IRPD I F+ VLSAC H GL+ + L+ + ME+ Y I
Sbjct: 389 GYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGIN 448
Query: 301 MGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTH---------SDM 351
Y C+VDLLGRAG++ EAY+L++RMP +P+E+ GA+LGAC+ H +
Sbjct: 449 PDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAAR 508
Query: 352 KMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
K+ E K++GT V+LS IYAA KW ++R +M ++K AG
Sbjct: 509 KVMELKPKMVGT---------YVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAG 554
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 152/334 (45%), Gaps = 20/334 (5%)
Query: 2 PERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFD 61
P+++ + +I Y G +E A +F+EMP + V W+ MI G+A + A A F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 100
Query: 62 E------APHE------LKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVS 109
E +P+E LK V+ G G V +L E + +V ++M++
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGV------VVKLGMEGSLYVDNAMMN 154
Query: 110 GYCKKGSVAEAET-IFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEF 168
Y EA IF I V++ W T+I G+ G G L+ +++M E E +
Sbjct: 155 MYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPY 214
Query: 169 TVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF 228
+ + A A + + GKQIH + + N V++ ++D+Y +CG L A+ F
Sbjct: 215 CITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEM 274
Query: 229 TQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEAL 288
+++ WN +IS E L F R E+ P+ TF ++++ACA+ L+
Sbjct: 275 EDKDLITWNTLISELE-RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQ 333
Query: 289 EVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEA 322
++ ++ ++ ++D+ + G + ++
Sbjct: 334 QLHGRIFRRGFNKNVELANALIDMYAKCGNIPDS 367
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 134/403 (33%), Positives = 214/403 (53%), Gaps = 24/403 (5%)
Query: 20 GDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELK--------GVV 71
GD+ A +F +P W+ +I GFA + + A + + +
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 72 TWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKGSVAEAETIFGRI 127
T + + AR A ++ + R + + ++++ Y K G + A +F +
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEM 170
Query: 128 PVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGK 187
PVR + WN +IAG V A++ ++ M EG E TVV+ L AC+ LG + G+
Sbjct: 171 PVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGE 230
Query: 188 QIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT-QRNICCWNAMISGFAIN 246
I H + N V + +DMY+KCG + A VFE FT ++++ WN MI+GFA++
Sbjct: 231 NIFHGYSND----NVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVH 286
Query: 247 GKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHY 306
G+ LE F ++E+ I+PD +++L L+AC H GL+ L V + M +E +KHY
Sbjct: 287 GEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHY 346
Query: 307 GCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAE---QVIKLIGT 363
GC+VDLL RAGRL+EA+D+I M M P+ + ++LGA +SD++MAE + IK +G
Sbjct: 347 GCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGV 406
Query: 364 NSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
N+ D VLLSN+YAA +W+ ++R M + +KI G
Sbjct: 407 NN----DGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPG 445
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 105/213 (49%), Gaps = 3/213 (1%)
Query: 12 MISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHE--LKG 69
++ Y +NGD+ SA +F+EMP + +W+ +I G + A L+ E +
Sbjct: 150 LLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRS 209
Query: 70 VVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIP- 128
VT + + G+++ +F N V ++ + Y K G V +A +F +
Sbjct: 210 EVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTG 269
Query: 129 VRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQ 188
+S+ WNTMI G+ +G RAL+ F+++ G +PD+ + ++ L+AC GL++ G
Sbjct: 270 KKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLS 329
Query: 189 IHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA 221
+ + + K + N +VD+ ++ G L A
Sbjct: 330 VFNNMACKGVERNMKHYGCVVDLLSRAGRLREA 362
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 138/401 (34%), Positives = 214/401 (53%), Gaps = 12/401 (2%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE-A 63
++V ++ Y ++ + A VF+ K VTWS MIGG+ N A +F +
Sbjct: 239 DLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML 298
Query: 64 PHELKGVVTWT---VMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKGS 116
++ +VT +++ G AR G++ R V + + V ++++S Y K GS
Sbjct: 299 VNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGS 358
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+ +A F I ++ + +N++I G V N E + + F EMR G PD T++ VL+A
Sbjct: 359 LCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTA 418
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
C+ L L G H VN + + L+DMY KCG L A+ VF+ +R+I W
Sbjct: 419 CSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSW 478
Query: 237 NAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKME- 295
N M+ GF I+G +E L F M+ + PD +T L +LSAC+H GL+ E ++ + M
Sbjct: 479 NTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSR 538
Query: 296 -AYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMA 354
+ + I HY CM DLL RAG L EAYD + +MP EP+ VLG +L AC T+ + ++
Sbjct: 539 GDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELG 598
Query: 355 EQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGI 395
+V K + S+ VLLSN Y+A+E+WE A ++R I
Sbjct: 599 NEVSKKM--QSLGETTESLVLLSNTYSAAERWEDAARIRMI 637
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 118/263 (44%), Gaps = 28/263 (10%)
Query: 111 YCKKGSVAEAETIFGRIPVRSLE--IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEF 168
Y V A +F IP + W+ MI Y N F E+AL + +M G P ++
Sbjct: 45 YASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKY 104
Query: 169 TVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF 228
T VL ACA L +D GK IH + + +V + LVD YAKCG+L A VF+
Sbjct: 105 TYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEM 164
Query: 229 TQRNICCWNAMISGFAINGKCREVLEFFGRMENLN-IRPDAITFLTVLSACAHGGLLSEA 287
+R++ WNAMISGF+++ +V+ F M ++ + P+ T + + A G L E
Sbjct: 165 PKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREG 224
Query: 288 LEVISKMEAYAIEMGIKHYGCMVDLLGRAGRL------------KEAYDLIKRMPMEPNE 335
V Y MG + DL+ + G L + +DL + NE
Sbjct: 225 KAV----HGYCTRMGFSN-----DLVVKTGILDVYAKSKCIIYARRVFDL----DFKKNE 271
Query: 336 TVLGAMLGACRTHSDMKMAEQVI 358
AM+G + +K A +V
Sbjct: 272 VTWSAMIGGYVENEMIKEAGEVF 294
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 129/301 (42%), Gaps = 50/301 (16%)
Query: 47 FARNGDTATARRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELM------PER- 99
+A + AR +FDE PH + W +M+ YA E A +++ M P +
Sbjct: 45 YASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKY 104
Query: 100 -------------------------NC-------FVWSSMVSGYCKKGSVAEAETIFGRI 127
NC +V +++V Y K G + A +F +
Sbjct: 105 TYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEM 164
Query: 128 PVRSLEIWNTMIAGYVQNGFGERALQAFEEMR-AEGFEPDEFTVVSVLSACAQLGLLDAG 186
P R + WN MI+G+ + + F +MR +G P+ T+V + A + G L G
Sbjct: 165 PKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREG 224
Query: 187 KQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAIN 246
K +H + + V +G++D+YAK ++ AR VF+ ++N W+AMI G+ N
Sbjct: 225 KAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVEN 284
Query: 247 GKCREVLE-FFGRMENLN---IRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMG 302
+E E FF + N N + P AI +L CA G LS V YA++ G
Sbjct: 285 EMIKEAGEVFFQMLVNDNVAMVTPVAIGL--ILMGCARFGDLSGGRCV----HCYAVKAG 338
Query: 303 I 303
Sbjct: 339 F 339
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 84/188 (44%), Gaps = 15/188 (7%)
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNP-FVLSGLVDMYAKCGDLVNARLVFEGFT 229
+S+L C + L G+ IH + + LT++ VL L +YA C ++ AR VF+
Sbjct: 3 LSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIP 62
Query: 230 QRNI--CCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEA 287
I W+ MI +A N + L+ + +M N +RP T+ VL ACA + +
Sbjct: 63 HPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDG 122
Query: 288 LEVISKMEA--YAIEMGIKHYGC--MVDLLGRAGRLKEAYDLIKRMPMEP----NETVLG 339
+ S + +A +M Y C +VD + G L+ A + MP N + G
Sbjct: 123 KLIHSHVNCSDFATDM----YVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISG 178
Query: 340 AMLGACRT 347
L C T
Sbjct: 179 FSLHCCLT 186
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/408 (32%), Positives = 215/408 (52%), Gaps = 21/408 (5%)
Query: 4 RNVVTWNAMISGYMRNGDMESASLVF----EEMPGKTGVTWSQMIGGFARNGDTATARRL 59
RN W A+I GY G + A ++ +E T+S ++ D R+
Sbjct: 112 RNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQ- 170
Query: 60 FDEAPHELKG---VVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGS 116
F L+G V M+D Y + ++ AR+VF+ MPER+ W+ +++ Y + G+
Sbjct: 171 FHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGN 230
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+ A +F +P + + W M+ G+ QN + AL+ F+ M G DE TV +SA
Sbjct: 231 MECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISA 290
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVL--SGLVDMYAKCGDLVNARLVFEGFTQRNIC 234
CAQLG + + + + + V+ S L+DMY+KCG++ A VF +N+
Sbjct: 291 CAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVF 350
Query: 235 CWNAMISGFAINGKCREVLEFFGRM-ENLNIRPDAITFLTVLSACAHGGLLSEALEVISK 293
+++MI G A +G+ +E L F M I+P+ +TF+ L AC+H GL+ + +V
Sbjct: 351 TYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDS 410
Query: 294 M-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMK 352
M + + ++ HY CMVDLLGR GRL+EA +LIK M +EP+ V GA+LGACR H++ +
Sbjct: 411 MYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPE 470
Query: 353 MAEQVIKLIGTNSITRADS----HNVLLSNIYAASEKWEKAEKMRGIM 396
+AE I + + + +LLSN+YA++ W ++R ++
Sbjct: 471 IAE-----IAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLI 513
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 118/234 (50%), Gaps = 16/234 (6%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
MPER+V++W +I+ Y R G+ME A+ +FE +P K V W+ M+ GFA+N A F
Sbjct: 210 MPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYF 269
Query: 61 DEAPHELKGVVTWTVMVDGY----ARKGEMEAAREVFELM------PERNCFVWSSMVSG 110
D E G+ V V GY A+ G + A ++ P + + S+++
Sbjct: 270 DRM--EKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDM 327
Query: 111 YCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEG-FEPDEFT 169
Y K G+V EA +F + +++ +++MI G +G + AL F M + +P+ T
Sbjct: 328 YSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVT 387
Query: 170 VVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFV--LSGLVDMYAKCGDLVNA 221
V L AC+ GL+D G+Q+ + ++ V P + +VD+ + G L A
Sbjct: 388 FVGALMACSHSGLVDQGRQVFDSM-YQTFGVQPTRDHYTCMVDLLGRTGRLQEA 440
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 132/309 (42%), Gaps = 36/309 (11%)
Query: 98 ERNCFVWSSMVSGYCKKGSVAE--AETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAF 155
+++C++ + ++ K G + A + + R+ +W +I GY G + A+ +
Sbjct: 78 DQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMY 137
Query: 156 EEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKC 215
MR E P FT ++L AC + L+ G+Q H R +V + ++DMY KC
Sbjct: 138 GCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKC 197
Query: 216 GDLVNARLVFEGFTQRNI-------------------------------CCWNAMISGFA 244
+ AR VF+ +R++ W AM++GFA
Sbjct: 198 ESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFA 257
Query: 245 INGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEV--ISKMEAYAIEMG 302
N K +E LE+F RME IR D +T +SACA G A I++ Y+
Sbjct: 258 QNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDH 317
Query: 303 IKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIG 362
+ ++D+ + G ++EA ++ M N +M+ TH + A + +
Sbjct: 318 VVIGSALIDMYSKCGNVEEAVNVFMSMN-NKNVFTYSSMILGLATHGRAQEALHLFHYMV 376
Query: 363 TNSITRADS 371
T + + ++
Sbjct: 377 TQTEIKPNT 385
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 228 bits (582), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 137/445 (30%), Positives = 231/445 (51%), Gaps = 54/445 (12%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNG------------------ 51
NA+IS Y R GD +A F M K ++W+ ++ FA +
Sbjct: 370 NALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAIT 429
Query: 52 -DTATARRLFD-----EAPHELKGVVTWTV----------------MVDGYARKGEMEAA 89
D+ T L + ++K V ++V ++D YA+ G +E A
Sbjct: 430 LDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYA 489
Query: 90 REVFELMPERNCFV-WSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFG 148
++F + ER V ++S++SGY GS +A+ +F + L W+ M+ Y ++
Sbjct: 490 HKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCP 549
Query: 149 ERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSG- 207
A+ F E++A G P+ T++++L CAQL L +Q H I R + L G
Sbjct: 550 NEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYI--IRGGLGDIRLKGT 607
Query: 208 LVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPD 267
L+D+YAKCG L +A VF+ +R++ + AM++G+A++G+ +E L + M NI+PD
Sbjct: 608 LLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPD 667
Query: 268 AITFLTVLSACAHGGLLSEALEVISKMEA-YAIEMGIKHYGCMVDLLGRAGRLKEAYDLI 326
+ T+L+AC H GL+ + L++ + + ++ ++ Y C VDL+ R GRL +AY +
Sbjct: 668 HVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFV 727
Query: 327 KRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADS----HNVLLSNIYAA 382
+MP+EPN + G +L AC T++ M + V N + +A+S ++VL+SN+YAA
Sbjct: 728 TQMPVEPNANIWGTLLRACTTYNRMDLGHSV-----ANHLLQAESDDTGNHVLISNMYAA 782
Query: 383 SEKWEKAEKMRGIMVDGESEKIAGC 407
KWE ++R +M E +K AGC
Sbjct: 783 DAKWEGVMELRNLMKKKEMKKPAGC 807
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 157/316 (49%), Gaps = 17/316 (5%)
Query: 3 ERNVVTWNAMISGYMRNGDM-ESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFD 61
E++ + NA++S Y + G + A F+ + K V+W+ +I GF+ N A A R F
Sbjct: 154 EKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFC 213
Query: 62 ---EAPHELKGVVTWTVM--VDGYARKGEMEAAREVFELMPER-----NCFVWSSMVSGY 111
+ P E V+ + + R++ + +R + FV +S+VS Y
Sbjct: 214 LMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFY 273
Query: 112 CKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEG-FEPDEFTV 170
+ G + EA ++F R+ + L WN +IAGY N +A Q F + +G PD T+
Sbjct: 274 LRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTI 333
Query: 171 VSVLSACAQLGLLDAGKQIH-HMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT 229
+S+L CAQL L +GK+IH +++ H L + V + L+ YA+ GD A F +
Sbjct: 334 ISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMS 393
Query: 230 QRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALE 289
++I WNA++ FA + K + L + N I D++T L++L C + + +
Sbjct: 394 TKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCIN----VQGIG 449
Query: 290 VISKMEAYAIEMGIKH 305
+ ++ Y+++ G+ H
Sbjct: 450 KVKEVHGYSVKAGLLH 465
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 108/236 (45%), Gaps = 13/236 (5%)
Query: 103 VWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMR-AE 161
V S+++ Y K + + + +F ++ +WN ++ G + G ++ F+ M A+
Sbjct: 58 VSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTG-LSVSCGRETMRFFKAMHFAD 116
Query: 162 GFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLV-N 220
+P T VL C +LG GK +H I L + V + LV MYAK G + +
Sbjct: 117 EPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPD 176
Query: 221 ARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAH 280
A F+G +++ WNA+I+GF+ N + F M P+ T VL CA
Sbjct: 177 AYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCAS 236
Query: 281 GGLLSEALEVIS--KMEAYAIE---MGIKHYGC--MVDLLGRAGRLKEAYDLIKRM 329
+ + + S ++ +Y ++ + + C +V R GR++EA L RM
Sbjct: 237 ---MDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRM 289
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/373 (20%), Positives = 147/373 (39%), Gaps = 81/373 (21%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGK-----TGVTWSQMIGGFARNGDTAT 55
M +++V+WN +I+GY N + A +F + K VT ++ A+ D A+
Sbjct: 289 MGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLAS 348
Query: 56 ARRLFD---EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYC 112
+ + + L+ ++ YAR G+ AA F LM ++ W++++ +
Sbjct: 349 GKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAF- 407
Query: 113 KKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVS 172
A++ F + L + E D T++S
Sbjct: 408 -----ADSPKQF-------------------------QFLNLLHHLLNEAITLDSVTILS 437
Query: 173 VLSACAQLGLLDAGKQIHHMIEHKRLTVN---PFVLSGLVDMYAKCGDLVNARLVFEGFT 229
+L C + + K++H L + P + + L+D YAKCG++ A +F G +
Sbjct: 438 LLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLS 497
Query: 230 Q-RNICCWNAMISGFAINGKCREVLEFFGRMENLNI------------------------ 264
+ R + +N+++SG+ +G + F M ++
Sbjct: 498 ERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFR 557
Query: 265 -------RPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMG---IKHYGCMVDLLG 314
RP+ +T + +L CA +L ++ + Y I G I+ G ++D+
Sbjct: 558 EIQARGMRPNTVTIMNLLPVCAQLA----SLHLVRQCHGYIIRGGLGDIRLKGTLLDVYA 613
Query: 315 RAGRLKEAYDLIK 327
+ G LK AY + +
Sbjct: 614 KCGSLKHAYSVFQ 626
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 6/145 (4%)
Query: 161 EGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVN 220
GF D + V+ ACA + L +G+ +H + V +++MYAKC + +
Sbjct: 15 SGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDD 74
Query: 221 ARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLN-IRPDAITFLTVLSACA 279
+ +F + WN +++G +++ RE + FF M + +P ++TF VL C
Sbjct: 75 CQKMFRQMDSLDPVVWNIVLTGLSVSCG-RETMRFFKAMHFADEPKPSSVTFAIVLPLCV 133
Query: 280 HGGLLSEALEVISKMEAYAIEMGIK 304
G M +Y I+ G++
Sbjct: 134 RLGDSYNG----KSMHSYIIKAGLE 154
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 228 bits (582), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 135/415 (32%), Positives = 230/415 (55%), Gaps = 17/415 (4%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
N + NA ++ Y + G + A VF + KT +W+ +IGG A++ D RL +A
Sbjct: 429 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDP----RLSLDAH 484
Query: 65 HELK--GVV--TWTV--MVDGYARKGEMEAAREVFELMP----ERNCFVWSSMVSGYCKK 114
++K G++ ++TV ++ ++ + +EV + ER+ FV+ S++S Y
Sbjct: 485 LQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHC 544
Query: 115 GSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVL 174
G + + +F + +SL WNT+I GY+QNGF +RAL F +M G + +++ V
Sbjct: 545 GELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVF 604
Query: 175 SACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNIC 234
AC+ L L G++ H L + F+ L+DMYAK G + + VF G +++
Sbjct: 605 GACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTA 664
Query: 235 CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM 294
WNAMI G+ I+G +E ++ F M+ PD +TFL VL+AC H GL+ E L + +M
Sbjct: 665 SWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQM 724
Query: 295 E-AYAIEMGIKHYGCMVDLLGRAGRLKEAYDLI-KRMPMEPNETVLGAMLGACRTHSDMK 352
+ ++ ++ +KHY C++D+LGRAG+L +A ++ + M E + + ++L +CR H +++
Sbjct: 725 KSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLE 784
Query: 353 MAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
M E+V + + +++ VLLSN+YA KWE K+R M + K AGC
Sbjct: 785 MGEKVAAKLFELEPEKPENY-VLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGC 838
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 182/374 (48%), Gaps = 26/374 (6%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
++ +V NA++ Y + G + +A ++F+ K V+W+ M+GGF+ GDT FD
Sbjct: 324 DKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGT---FDV 380
Query: 63 APHELKG-------VVTWTVMVDGYARKGEMEAAREV--FELMPE--RNCFVWSSMVSGY 111
L G VT V + + + +E+ + L E N V ++ V+ Y
Sbjct: 381 LRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASY 440
Query: 112 CKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVV 171
K GS++ A+ +F I +++ WN +I G+ Q+ +L A +M+ G PD FTV
Sbjct: 441 AKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVC 500
Query: 172 SVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQR 231
S+LSAC++L L GK++H I L + FV ++ +Y CG+L + +F+ +
Sbjct: 501 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 560
Query: 232 NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVI 291
++ WN +I+G+ NG L F +M I+ I+ + V AC+ L +L +
Sbjct: 561 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS----LLPSLRLG 616
Query: 292 SKMEAYAIEMGIKH---YGC-MVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRT 347
+ AYA++ ++ C ++D+ + G + ++ + + E + AM+
Sbjct: 617 REAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKSTASWNAMIMGYGI 675
Query: 348 HSDMKMAEQVIKLI 361
H +A++ IKL
Sbjct: 676 HG---LAKEAIKLF 686
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 133/292 (45%), Gaps = 13/292 (4%)
Query: 12 MISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE---APHELK 68
+I+ Y G + + VF+ + K W+ +I ++RN F E L
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 69 GVVTWTVMVDGYARKGEMEAAREVFELMPE----RNCFVWSSMVSGYCKKGSVAEAETIF 124
T+ ++ A ++ V L+ + + FV +++VS Y G V +A +F
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 125 GRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAE----GFEPDEFTVVSVLSACAQL 180
+P R+L WN+MI + NGF E + EM E F PD T+V+VL CA+
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 181 GLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMI 240
+ GK +H RL + + L+DMY+KCG + NA+++F+ +N+ WN M+
Sbjct: 306 REIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 365
Query: 241 SGFAINGKCREVLEFFGRM--ENLNIRPDAITFLTVLSACAHGGLLSEALEV 290
GF+ G + +M +++ D +T L + C H L E+
Sbjct: 366 GGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKEL 417
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 136/287 (47%), Gaps = 12/287 (4%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
+V NA++S Y +G + A +F+ MP + V+W+ MI F+ NG + + L E
Sbjct: 221 DVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMM 280
Query: 65 HE------LKGVVTWTVMVDGYARKGEMEAAREV----FELMPERNCFVWSSMVSGYCKK 114
E + V T ++ AR+ E+ + V +L ++ + ++++ Y K
Sbjct: 281 EENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKC 340
Query: 115 GSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRA--EGFEPDEFTVVS 172
G + A+ IF +++ WNTM+ G+ G +M A E + DE T+++
Sbjct: 341 GCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILN 400
Query: 173 VLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRN 232
+ C L + K++H + N V + V YAKCG L A+ VF G +
Sbjct: 401 AVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKT 460
Query: 233 ICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA 279
+ WNA+I G A + R L+ +M+ + PD+ T ++LSAC+
Sbjct: 461 VNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 10/215 (4%)
Query: 75 VMVDGYARKGEMEAAREVFELMP-----ERNCFVWSSMVSGYCKKGSVAEAETIFGRIPV 129
+++ ++ ++E R++ +L+ + + + +++ Y GS ++ +F +
Sbjct: 89 LLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRS 148
Query: 130 RSLEIWNTMIAGYVQNGFGERALQAFEEM-RAEGFEPDEFTVVSVLSACAQLGLLDAGKQ 188
++L WN +I+ Y +N + L+ F EM PD FT V+ ACA + + G
Sbjct: 149 KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 208
Query: 189 IHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGK 248
+H ++ L + FV + LV Y G + +A +F+ +RN+ WN+MI F+ NG
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 249 CREVLEFFGRMENLN----IRPDAITFLTVLSACA 279
E G M N PD T +TVL CA
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 303
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 119/253 (47%), Gaps = 36/253 (14%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMP----GKTGVTWSQMIGGFARNGDTATA 56
M ++++V+WN +I+GY++NG + A VF +M G++ + G + +
Sbjct: 557 MEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS----LLPS 612
Query: 57 RRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGS 116
RL EA YA K + E + F+ S++ Y K GS
Sbjct: 613 LRLGREA--------------HAYALKH-----------LLEDDAFIACSLIDMYAKNGS 647
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+ ++ +F + +S WN MI GY +G + A++ FEEM+ G PD+ T + VL+A
Sbjct: 648 ITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTA 707
Query: 177 CAQLGLLDAG-KQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA-RLVFEGFTQR-NI 233
C GL+ G + + M L N + ++DM + G L A R+V E ++ ++
Sbjct: 708 CNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADV 767
Query: 234 CCWNAMISGFAIN 246
W +++S I+
Sbjct: 768 GIWKSLLSSCRIH 780
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 228 bits (582), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 147/489 (30%), Positives = 231/489 (47%), Gaps = 87/489 (17%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEM------PGKTGV---------------- 38
MPER+ TWNAM+SG+ ++G + A +F EM P V
Sbjct: 113 MPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLL 172
Query: 39 --------------------TWSQMIGGFARNGDTATARRLFDEAPHELKGVVTWTVMVD 78
TW I + + GD +A+ +F+ + VV+W M
Sbjct: 173 EAMHAVGIRLGVDVQVTVANTW---ISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFK 229
Query: 79 GYARKGEMEAAREVFELM------PERNCFV----------------------------- 103
Y+ GE A ++ LM P+ + F+
Sbjct: 230 AYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQ 289
Query: 104 ----WSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMR 159
++ +S Y K A +F + R+ W MI+GY + G + AL F M
Sbjct: 290 DIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMI 349
Query: 160 AEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIE-HKRLTVNPFVLSGLVDMYAKCGDL 218
G +PD T++S++S C + G L+ GK I + + N + + L+DMY+KCG +
Sbjct: 350 KSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSI 409
Query: 219 VNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSAC 278
AR +F+ ++ + W MI+G+A+NG E L+ F +M +L+ +P+ ITFL VL AC
Sbjct: 410 HEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQAC 469
Query: 279 AHGGLLSEALEVISKM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETV 337
AH G L + E M + Y I G+ HY CMVDLLGR G+L+EA +LI+ M +P+ +
Sbjct: 470 AHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGI 529
Query: 338 LGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMV 397
GA+L AC+ H ++K+AEQ + + N + + V ++NIYAA+ W+ ++R IM
Sbjct: 530 WGALLNACKIHRNVKIAEQAAESL-FNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMK 588
Query: 398 DGESEKIAG 406
+K G
Sbjct: 589 QRNIKKYPG 597
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 12/208 (5%)
Query: 100 NCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMR 159
+ FV ++ V + K SV A +F R+P R WN M++G+ Q+G ++A F EMR
Sbjct: 86 DVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMR 145
Query: 160 AEGFEPDEFTVVSVLSACA---QLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCG 216
PD TV++++ + + L LL+A +H + + V V + + Y KCG
Sbjct: 146 LNEITPDSVTVMTLIQSASFEKSLKLLEA---MHAVGIRLGVDVQVTVANTWISTYGKCG 202
Query: 217 DLVNARLVFEGFTQ--RNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTV 274
DL +A+LVFE + R + WN+M +++ G+ + + M +PD TF+ +
Sbjct: 203 DLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINL 262
Query: 275 LSACAHGGLLSEALEVISKMEAYAIEMG 302
++C + L++ + ++AI +G
Sbjct: 263 AASCQNPETLTQG----RLIHSHAIHLG 286
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 4/175 (2%)
Query: 129 VRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQ 188
+ S+ WN I V +L F EM+ GFEP+ FT V ACA+L + +
Sbjct: 14 LSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEM 73
Query: 189 IHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGK 248
+H + + FV + VDM+ KC + A VFE +R+ WNAM+SGF +G
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 133
Query: 249 CREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGI 303
+ F M I PD++T +T++ + + ++L+++ M A I +G+
Sbjct: 134 TDKAFSLFREMRLNEITPDSVTVMTLIQSAS----FEKSLKLLEAMHAVGIRLGV 184
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 228 bits (580), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 150/483 (31%), Positives = 230/483 (47%), Gaps = 83/483 (17%)
Query: 4 RNVVTWNAMISGYMRNGDMESASLVFEEMPG----------------------------- 34
RNVV W +MI+GY++N E ++F M
Sbjct: 205 RNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWF 264
Query: 35 -----KTGVTWSQ-----MIGGFARNGDTATARRLFDEAPHELKGVVTWTVMVDGYARKG 84
K+G+ S ++ + + GD + ARR+F+E H +V WT M+ GY G
Sbjct: 265 HGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSH--VDLVMWTAMIVGYTHNG 322
Query: 85 EMEAAREVFELMP----ERNCFVWSSMVSG------------------------------ 110
+ A +F+ M + NC +S++SG
Sbjct: 323 SVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANA 382
Query: 111 ----YCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
Y K +A+ +F + + WN++I+G+ QNG AL F M +E P+
Sbjct: 383 LVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPN 442
Query: 167 EFTVVSVLSACAQLGLLDAGKQIH-HMIEHKRLTVNPF-VLSGLVDMYAKCGDLVNARLV 224
TV S+ SACA LG L G +H + ++ L + V + L+D YAKCGD +ARL+
Sbjct: 443 GVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLI 502
Query: 225 FEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLL 284
F+ ++N W+AMI G+ G LE F M +P+ TF ++LSAC H G++
Sbjct: 503 FDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMV 562
Query: 285 SEALEVISKM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLG 343
+E + S M + Y KHY CMVD+L RAG L++A D+I++MP++P+ GA L
Sbjct: 563 NEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLH 622
Query: 344 ACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEK 403
C HS + E VIK + A S+ VL+SN+YA+ +W +A+++R +M K
Sbjct: 623 GCGMHSRFDLGEIVIKKMLDLHPDDA-SYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSK 681
Query: 404 IAG 406
IAG
Sbjct: 682 IAG 684
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 149/297 (50%), Gaps = 9/297 (3%)
Query: 12 MISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEA-PHELK-G 69
++S Y G + A LVF+++P W M+ + N ++ +L+D H +
Sbjct: 82 LVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYD 141
Query: 70 VVTWTVMVDGYARKGEMEAAREV---FELMPERNCFVWSSMVSGYCKKGSVAEAETIFGR 126
+ ++ + +++ +++ +P + V + ++ Y K G + A +F
Sbjct: 142 DIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFND 201
Query: 127 IPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAG 186
I +R++ W +MIAGYV+N E L F MR +E+T +++ AC +L L G
Sbjct: 202 ITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQG 261
Query: 187 KQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAIN 246
K H + + ++ +++ L+DMY KCGD+ NAR VF + ++ W AMI G+ N
Sbjct: 262 KWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHN 321
Query: 247 GKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGI 303
G E L F +M+ + I+P+ +T +VLS C L E LE+ + +I++GI
Sbjct: 322 GSVNEALSLFQKMKGVEIKPNCVTIASVLSGCG----LIENLELGRSVHGLSIKVGI 374
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 134/289 (46%), Gaps = 35/289 (12%)
Query: 103 VWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEG 162
+ + +VS Y G +A +F +IP +W M+ Y N ++ ++ + G
Sbjct: 78 IATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHG 137
Query: 163 FEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNAR 222
F D+ L AC +L LD GK+IH + K + + VL+GL+DMYAKCG++ +A
Sbjct: 138 FRYDDIVFSKALKACTELQDLDNGKKIHCQLV-KVPSFDNVVLTGLLDMYAKCGEIKSAH 196
Query: 223 LVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA--- 279
VF T RN+ CW +MI+G+ N C E L F RM N+ + T+ T++ AC
Sbjct: 197 KVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLS 256
Query: 280 --------HGGLLSEALEVISKMEAYAIEMGIK-----------HYGCMVDLL------- 313
HG L+ +E+ S + ++M +K + VDL+
Sbjct: 257 ALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIV 316
Query: 314 --GRAGRLKEAYDLIKRMP---MEPNETVLGAMLGACRTHSDMKMAEQV 357
G + EA L ++M ++PN + ++L C ++++ V
Sbjct: 317 GYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSV 365
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 142/304 (46%), Gaps = 44/304 (14%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKT----GVTWSQMIGGFARNGDTATARR 58
E+++V WN++ISG+ +NG + A +F M ++ GVT + + A G A
Sbjct: 405 EKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSS 464
Query: 59 LFDEAPH----ELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKK 114
L + V T ++D YA+ G+ ++AR +F+ + E+N WS+M+ GY K+
Sbjct: 465 LHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQ 524
Query: 115 GSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVL 174
G + SLE+ FEEM + +P+E T S+L
Sbjct: 525 GDT-----------IGSLEL--------------------FEEMLKKQQKPNESTFTSIL 553
Query: 175 SACAQLGLLDAGKQ-IHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF-TQRN 232
SAC G+++ GK+ M + T + + +VDM A+ G+L A + E Q +
Sbjct: 554 SACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPD 613
Query: 233 ICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSAC-AHGGLLSEALEVI 291
+ C+ A + G ++ + +M L++ PD ++ ++S A G ++A EV
Sbjct: 614 VRCFGAFLHGCGMHSRFDLGEIVIKKM--LDLHPDDASYYVLVSNLYASDGRWNQAKEVR 671
Query: 292 SKME 295
+ M+
Sbjct: 672 NLMK 675
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 228 bits (580), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 142/455 (31%), Positives = 225/455 (49%), Gaps = 75/455 (16%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFAR------- 49
MP RN ++WN MI G+ + D ESA +FE M + VTW+ ++ ++
Sbjct: 219 MPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDV 278
Query: 50 -----------NGDTATARRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPE 98
N + A +F EL+ + + V GY KG E E +P
Sbjct: 279 LKYFHLMRMSGNAVSGEALAVFFSVCAELEAL-SIAEKVHGYVIKGGFE------EYLPS 331
Query: 99 RNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQ-------------- 144
RN +++ Y K+G V +AE +F +I + +E WN++I +V
Sbjct: 332 RN-----ALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSEL 386
Query: 145 -------------------------NGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQ 179
G G+ +L+ F +M+ + T+ +LS CA+
Sbjct: 387 EEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAE 446
Query: 180 LGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAM 239
L L+ G++IH + ++ N V + LV+MYAKCG L LVFE +++ WN++
Sbjct: 447 LPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSI 506
Query: 240 ISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYA 298
I G+ ++G + L F RM + PD I + VLSAC+H GL+ + E+ M + +
Sbjct: 507 IKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFG 566
Query: 299 IEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVI 358
+E +HY C+VDLLGR G LKEA +++K MPMEP VLGA+L +CR H ++ +AE +
Sbjct: 567 LEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIA 626
Query: 359 KLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMR 393
+ R S+ +LLSNIY+A +WE++ +R
Sbjct: 627 SQLSVLEPERTGSY-MLLSNIYSAGGRWEESANVR 660
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 175/421 (41%), Gaps = 71/421 (16%)
Query: 12 MISGYMRNGDMESASLVFEEMPG---KTGVTWSQMIGGFARNGDTATARRLFDEAPHELK 68
+IS Y R G + A VFE + W+ ++ +G L++ A +
Sbjct: 95 LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHG-------LYENALELYR 147
Query: 69 GVVTWTVMVDGYARKGEMEAAR-------------EVFELMPERNCFVWSSMVSGYCKKG 115
G+ + DGY + A R +V ++ + N V + +++ Y K G
Sbjct: 148 GMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAG 207
Query: 116 SVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLS 175
+ +A +F +PVR+ WN MI G+ Q E A++ FE M+ E F+PDE T SVLS
Sbjct: 208 RMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLS 267
Query: 176 ACAQLGLL-DAGKQIHHM-------------------IEHKRLT----VNPFVLSG---- 207
+Q G D K H M E + L+ V+ +V+ G
Sbjct: 268 CHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEE 327
Query: 208 -------LVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRME 260
L+ +Y K G + +A +F + I WN++I+ F GK E L F +E
Sbjct: 328 YLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELE 387
Query: 261 NL----NIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRA 316
+ N++ + +T+ +V+ C G ++LE +M+ + C++ +
Sbjct: 388 EMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAEL 447
Query: 317 GRL---KEAYDLIKRMPMEPNETVLGA---MLGACRTHSDMKMAEQVIK---LIGTNSIT 367
L +E + + R M N V A M C S+ + + I+ LI NSI
Sbjct: 448 PALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSII 507
Query: 368 R 368
+
Sbjct: 508 K 508
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 115/263 (43%), Gaps = 38/263 (14%)
Query: 105 SSMVSGYCKKGSVAEAETIFGRIPV---RSLEIWNTMIAGYVQNGFGERALQAFEEMRAE 161
++++S Y + G + +A +F + + L +WN+++ V +G E AL+ + MR
Sbjct: 93 ANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQR 152
Query: 162 GFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA 221
G D + + +L AC LG + H + L N V++ L+ +Y K G + +A
Sbjct: 153 GLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDA 212
Query: 222 RLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHG 281
+F RN WN MI GF+ C ++ F M+ +PD +T+ +VLS +
Sbjct: 213 YNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQC 272
Query: 282 GLLS-------------------------------EALEVISKMEAYAIEMGIKHY---- 306
G EAL + K+ Y I+ G + Y
Sbjct: 273 GKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSR 332
Query: 307 GCMVDLLGRAGRLKEAYDLIKRM 329
++ + G+ G++K+A L +++
Sbjct: 333 NALIHVYGKQGKVKDAEHLFRQI 355
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 223/416 (53%), Gaps = 36/416 (8%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGG---FARNGDTATAR 57
+P +V +N +IS + N + L F + Q++ F R + T
Sbjct: 66 IPNPSVFLYNTLISSIVSNHNSTQTHLAFS--------LYDQILSSRSNFVRPNE-FTYP 116
Query: 58 RLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMP-ERNCFVWSSMVSGYCKKGS 116
LF + + + + R G A + L P + FV +++V Y G
Sbjct: 117 SLFKASGFDAQ-----------WHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGK 165
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQN---GFGERALQAFEEMRAEGFEPDEFTVVSV 173
+ EA ++F RI L WNT++A Y + E L F M+ P+E ++V++
Sbjct: 166 LREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVR---PNELSLVAL 222
Query: 174 LSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNI 233
+ +CA LG G H + LT+N FV + L+D+Y+KCG L AR VF+ +QR++
Sbjct: 223 IKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDV 282
Query: 234 CCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISK 293
C+NAMI G A++G +E +E + + + + PD+ TF+ +SAC+H GL+ E L++ +
Sbjct: 283 SCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNS 342
Query: 294 MEA-YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMK 352
M+A Y IE ++HYGC+VDLLGR+GRL+EA + IK+MP++PN T+ + LG+ +TH D +
Sbjct: 343 MKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFE 402
Query: 353 MAEQVIK-LIGTNSITRADSHN-VLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
E +K L+G + +S N VLLSNIYA +W EK R +M D K G
Sbjct: 403 RGEIALKHLLG---LEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPG 455
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 93/182 (51%), Gaps = 23/182 (12%)
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFE------EMRAEGFEPDEFTV 170
++ A +I +IP S+ ++NT+I+ V N + AF R+ P+EFT
Sbjct: 56 LSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTY 115
Query: 171 VSVLSACAQLGLLDA-----GKQIH-HMIEH-KRLTVNPFVLSGLVDMYAKCGDLVNARL 223
S+ A DA G+ +H H+++ + + + FV + LV YA CG L AR
Sbjct: 116 PSLFKASG----FDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARS 171
Query: 224 VFEGFTQRNICCWNAMISGFAINGKC---REVLEFFGRMENLNIRPDAITFLTVLSACAH 280
+FE + ++ WN +++ +A + + EVL F RM+ +RP+ ++ + ++ +CA+
Sbjct: 172 LFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ---VRPNELSLVALIKSCAN 228
Query: 281 GG 282
G
Sbjct: 229 LG 230
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 134/414 (32%), Positives = 221/414 (53%), Gaps = 20/414 (4%)
Query: 3 ERNVVTWNAMISGYMR----NGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARR 58
RN + +++ ++ N AS +F+ + + MI +R+ R
Sbjct: 40 HRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLR 99
Query: 59 LF-----DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCF-----VWSSMV 108
F +E +T+ ++ + +++ + + F V + ++
Sbjct: 100 YFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVL 159
Query: 109 SGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEF 168
Y + + +A +F IP + W+ ++ GYV+ G G L+ F+EM G EPDEF
Sbjct: 160 RIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEF 219
Query: 169 TVVSVLSACAQLGLLDAGKQIHHMIEHKR-LTVNPFVLSGLVDMYAKCGDLVNARLVFEG 227
+V + L+ACAQ+G L GK IH ++ KR + + FV + LVDMYAKCG + A VFE
Sbjct: 220 SVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEK 279
Query: 228 FTQRNICCWNAMISGFAINGKCREVLEFFGRMENLN-IRPDAITFLTVLSACAHGGLLSE 286
T+RN+ W A+I G+A G ++ R+E + I+PD++ L VL+ACAHGG L E
Sbjct: 280 LTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEE 339
Query: 287 ALEVISKMEA-YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGAC 345
++ MEA Y I +HY C+VDL+ RAGRL +A DLI++MPM+P +V GA+L C
Sbjct: 340 GRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGC 399
Query: 346 RTHSDMKMAE---QVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIM 396
RTH ++++ E Q + + ++ ++ V LSNIY + ++ +A K+RG++
Sbjct: 400 RTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMI 453
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 113/258 (43%), Gaps = 53/258 (20%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEM------PGKTGVTWSQMIGGFARNGDTA 54
+P+ +VV W+ +++GY+R G VF+EM P + VT + + A+ G A
Sbjct: 178 IPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTA--LTACAQVGALA 235
Query: 55 TARRLFDEAPHELKGVVTW--------TVMVDGYARKGEMEAAREVFELMPERNCFVWSS 106
+ + HE W T +VD YA+ G +E A EVFE + RN F W++
Sbjct: 236 QGKWI-----HEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAA 290
Query: 107 MVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
++ GY G +A T RI R +G +PD
Sbjct: 291 LIGGYAAYGYAKKATTCLDRIE------------------------------REDGIKPD 320
Query: 167 EFTVVSVLSACAQLGLLDAGKQIHHMIEHKR-LTVNPFVLSGLVDMYAKCGDLVNARLVF 225
++ VL+ACA G L+ G+ + +E + +T S +VD+ + G L +A +
Sbjct: 321 SVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLI 380
Query: 226 EGFTQRNIC-CWNAMISG 242
E + + W A+++G
Sbjct: 381 EKMPMKPLASVWGALLNG 398
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/435 (33%), Positives = 218/435 (50%), Gaps = 38/435 (8%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE-- 62
+V NA I Y + + A VF+EM + V+W+ +I +NG LF
Sbjct: 416 DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSML 475
Query: 63 ----APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVA 118
P E G G ME + + N V S++ Y K G +
Sbjct: 476 RSRIEPDEFTFGSILKACTGGSLGYG-MEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIE 534
Query: 119 EAETIFGRIPVRS--------LE------------IWNTMIAGYVQNGFGERALQAFEEM 158
EAE I R R+ LE WN++I+GYV E A F M
Sbjct: 535 EAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRM 594
Query: 159 RAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDL 218
G PD+FT +VL CA L GKQIH + K L + ++ S LVDMY+KCGDL
Sbjct: 595 MEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDL 654
Query: 219 VNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSAC 278
++RL+FE +R+ WNAMI G+A +GK E ++ F RM NI+P+ +TF+++L AC
Sbjct: 655 HDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRAC 714
Query: 279 AHGGLLSEALEVISKME-AYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETV 337
AH GL+ + LE M+ Y ++ + HY MVD+LG++G++K A +LI+ MP E ++ +
Sbjct: 715 AHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVI 774
Query: 338 LGAMLGACRTH-SDMKMAEQVIKLIGTNSITRADSHN----VLLSNIYAASEKWEKAEKM 392
+LG C H +++++AE+ T ++ R D + LLSN+YA + WEK +
Sbjct: 775 WRTLLGVCTIHRNNVEVAEE-----ATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDL 829
Query: 393 RGIMVDGESEKIAGC 407
R M + +K GC
Sbjct: 830 RRNMRGFKLKKEPGC 844
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 194/436 (44%), Gaps = 45/436 (10%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
MP R+VV+WN MI+GY ++ DM A+ F MP + V+W+ M+ G+ +NG++ + +F
Sbjct: 109 MPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVF 168
Query: 61 DEAPHELKGV----VTWTVMVDGYARKGEMEAAREVFELMPERNC----FVWSSMVSGYC 112
+ E G+ T+ +++ + + ++ ++ C S+++ Y
Sbjct: 169 VDMGRE--GIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYA 226
Query: 113 KKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVS 172
K E+ +F IP ++ W+ +IAG VQN AL+ F+EM+ + S
Sbjct: 227 KGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYAS 286
Query: 173 VLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRN 232
VL +CA L L G Q+H + V + +DMYAKC ++ +A+++F+ N
Sbjct: 287 VLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLN 346
Query: 233 ICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVIS 292
+NAMI+G++ + L F R+ + + D I+ V ACA LSE L++
Sbjct: 347 RQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYG 406
Query: 293 KMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM----------------------- 329
++ + + +D+ G+ L EA+ + M
Sbjct: 407 LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYE 466
Query: 330 -----------PMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSN 378
+EP+E G++L AC T + ++ I + + S L +
Sbjct: 467 TLFLFVSMLRSRIEPDEFTFGSILKAC-TGGSLGYGMEIHSSIVKSGMASNSSVGCSLID 525
Query: 379 IYAASEKWEKAEKMRG 394
+Y+ E+AEK+
Sbjct: 526 MYSKCGMIEEAEKIHS 541
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 127/247 (51%), Gaps = 8/247 (3%)
Query: 80 YARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMI 139
Y + +A VF+ MP R+ W+ M++GY K + +A + F +PVR + WN+M+
Sbjct: 93 YTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSML 152
Query: 140 AGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLT 199
+GY+QNG ++++ F +M EG E D T +L C+ L G QIH ++
Sbjct: 153 SGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCD 212
Query: 200 VNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRM 259
+ S L+DMYAK V + VF+G ++N W+A+I+G N L+FF M
Sbjct: 213 TDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEM 272
Query: 260 ENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCM----VDLLGR 315
+ +N + +VL +CA LSE L + ++ A+A++ G + +D+ +
Sbjct: 273 QKVNAGVSQSIYASVLRSCA---ALSE-LRLGGQLHAHALKSDFAADGIVRTATLDMYAK 328
Query: 316 AGRLKEA 322
+++A
Sbjct: 329 CDNMQDA 335
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 155/339 (45%), Gaps = 9/339 (2%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
+ +VV +A++ Y + + VF+ +P K V+WS +I G +N + A + F E
Sbjct: 212 DTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKE 271
Query: 63 APHELKGVVT--WTVMVDGYARKGEMEAAREVFELMPERNC----FVWSSMVSGYCKKGS 116
GV + ++ A E+ ++ + + V ++ + Y K +
Sbjct: 272 MQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDN 331
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+ +A+ +F + + +N MI GY Q G +AL F + + G DE ++ V A
Sbjct: 332 MQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRA 391
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
CA + L G QI+ + L+++ V + +DMY KC L A VF+ +R+ W
Sbjct: 392 CALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSW 451
Query: 237 NAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA 296
NA+I+ NGK E L F M I PD TF ++L AC GG L +E+ S +
Sbjct: 452 NAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVK 510
Query: 297 YAIEMGIKHYGC-MVDLLGRAGRLKEAYDLIKRMPMEPN 334
+ GC ++D+ + G ++EA + R N
Sbjct: 511 SGMASN-SSVGCSLIDMYSKCGMIEEAEKIHSRFFQRAN 548
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 88/219 (40%), Gaps = 34/219 (15%)
Query: 173 VLSACAQLGLLDAGKQIH-HMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQR 231
V CA+ G L+ GKQ H HMI FVL+ L+ +Y D V+A +VF+ R
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISG-FRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLR 112
Query: 232 NICCWNAMI-------------------------------SGFAINGKCREVLEFFGRME 260
++ WN MI SG+ NG+ + +E F M
Sbjct: 113 DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG 172
Query: 261 NLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLK 320
I D TF +L C+ S +++ + + + ++D+ + R
Sbjct: 173 REGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFV 232
Query: 321 EAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIK 359
E+ + + +P E N A++ C ++ + +A + K
Sbjct: 233 ESLRVFQGIP-EKNSVSWSAIIAGCVQNNLLSLALKFFK 270
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 136/399 (34%), Positives = 211/399 (52%), Gaps = 34/399 (8%)
Query: 26 SLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKGVVTWTVMVDGYARKGE 85
S + ++ P W+ ++ + R+ A +++ G+V TV+ D Y+
Sbjct: 73 SRILDQYP--IAFLWNNIMRSYIRHESPLDAIQVY-------LGMVRSTVLPDRYSLPIV 123
Query: 86 MEAAREV--FELMPERNC-----------FVWSSMVSGYCKKGSVAEAETIFGRIPVRSL 132
++AA ++ F L E + F S ++ YCK G A +F P R L
Sbjct: 124 IKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKL 183
Query: 133 EIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHM 192
WN +I G G A++ F +M+ G EPD+FT+VSV ++C LG L Q+H
Sbjct: 184 GSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKC 243
Query: 193 IEHKRL--TVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCR 250
+ + + +L+ L+DMY KCG + A +FE QRN+ W++MI G+A NG
Sbjct: 244 VLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTL 303
Query: 251 EVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA-YAIEMGIKHYGCM 309
E LE F +M +RP+ ITF+ VLSAC HGGL+ E + M++ + +E G+ HYGC+
Sbjct: 304 EALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCI 363
Query: 310 VDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQV----IKLIGTNS 365
VDLL R G+LKEA +++ MPM+PN V G ++G C D++MAE V ++L N
Sbjct: 364 VDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWN- 422
Query: 366 ITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKI 404
D V+L+N+YA W+ E++R +M + KI
Sbjct: 423 ----DGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKI 457
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 108/255 (42%), Gaps = 49/255 (19%)
Query: 2 PERNVVTWNAMISGYMRNGDMESASLVFEEMPGK-------TGVTWSQMIGGFARNGDTA 54
PER + +WNA+I G G A +F +M T V+ + GG GD +
Sbjct: 179 PERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGL---GDLS 235
Query: 55 TARRL----FDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSG 110
A +L E ++ ++D Y + G M+ A +FE M +RN WSSM+ G
Sbjct: 236 LAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVG 295
Query: 111 YCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
Y G+ E AL+ F +MR G P++ T
Sbjct: 296 YAANGNTLE-------------------------------ALECFRQMREFGVRPNKITF 324
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFV--LSGLVDMYAKCGDLVNARLVFEGF 228
V VLSAC GL++ GK M++ + + P + +VD+ ++ G L A+ V E
Sbjct: 325 VGVLSACVHGGLVEEGKTYFAMMKSE-FELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEM 383
Query: 229 TQR-NICCWNAMISG 242
+ N+ W ++ G
Sbjct: 384 PMKPNVMVWGCLMGG 398
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 18/164 (10%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEM------PGK---TGVTWSQMIGGFARNG 51
M +RNVV+W++MI GY NG+ A F +M P K GV + + GG G
Sbjct: 281 MRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEG 340
Query: 52 DT--ATARRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER-NCFVWSSMV 108
T A + F+ P G+ + +VD +R G+++ A++V E MP + N VW ++
Sbjct: 341 KTYFAMMKSEFELEP----GLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLM 396
Query: 109 SGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERAL 152
G K G V AE + + LE WN + + N + R +
Sbjct: 397 GGCEKFGDVEMAEWVAPYMV--ELEPWNDGVYVVLANVYALRGM 438
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 126/383 (32%), Positives = 214/383 (55%), Gaps = 16/383 (4%)
Query: 22 MESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE-APHELK-GVVTWTVMVDG 79
++S VFE MP K V+++ +I G+A++G A R+ E +LK T + ++
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 80 YARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIW 135
++ ++ +E+ + + + ++ SS+V Y K + ++E +F R+ R W
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISW 311
Query: 136 NTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEH 195
N+++AGYVQNG AL+ F +M +P SV+ ACA L L GKQ+H +
Sbjct: 312 NSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 371
Query: 196 KRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEF 255
N F+ S LVDMY+KCG++ AR +F+ + W A+I G A++G E +
Sbjct: 372 GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSL 431
Query: 256 FGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYAIEMGIKHYGCMVDLLG 314
F M+ ++P+ + F+ VL+AC+H GL+ EA + M + Y + ++HY + DLLG
Sbjct: 432 FEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLG 491
Query: 315 RAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHN- 373
RAG+L+EAY+ I +M +EP +V +L +C H ++++AE+V + I T DS N
Sbjct: 492 RAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFT-----VDSENM 546
Query: 374 ---VLLSNIYAASEKWEKAEKMR 393
VL+ N+YA++ +W++ K+R
Sbjct: 547 GAYVLMCNMYASNGRWKEMAKLR 569
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 151/334 (45%), Gaps = 42/334 (12%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
+ +V ++++ Y ++ +E + VF + + G++W+ ++ G+ +NG A RLF +
Sbjct: 274 DSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQ 333
Query: 63 -APHELK-GVVTWTVMVDGYARKGEMEAAREVFELMPE----RNCFVWSSMVSGYCKKGS 116
++K G V ++ ++ A + +++ + N F+ S++V Y K G+
Sbjct: 334 MVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGN 393
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+ A IF R+ V W +I G+ +G G A+ FEEM+ +G +P++ V+VL+A
Sbjct: 394 IKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTA 453
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
C+ +GL+D + + + L+ ++ YA DL+
Sbjct: 454 CSHVGLVDEAWGYFNSM------TKVYGLNQELEHYAAVADLL----------------- 490
Query: 237 NAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA 296
G A GK E F +M + P + T+LS+C+ L A +V K+
Sbjct: 491 -----GRA--GKLEEAYNFISKM---CVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFT 540
Query: 297 YAIE-MGIKHYGCMVDLLGRAGRLKEAYDLIKRM 329
E MG Y M ++ GR KE L RM
Sbjct: 541 VDSENMGA--YVLMCNMYASNGRWKEMAKLRLRM 572
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 114/267 (42%), Gaps = 48/267 (17%)
Query: 105 SSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFE 164
S ++S Y + EA +F + + W ++I + +AL +F EMRA G
Sbjct: 43 SIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRC 102
Query: 165 PDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAK---------- 214
PD SVL +C + L G+ +H I + + + + L++MYAK
Sbjct: 103 PDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISV 162
Query: 215 -------------CGD-------------LVNARLVFEGFTQRNICCWNAMISGFAINGK 248
GD + + R VFE ++++ +N +I+G+A +G
Sbjct: 163 GNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGM 222
Query: 249 CREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVI--SKMEAYAIEMGIKHY 306
+ L M +++PD+ T +VL + SE ++VI ++ Y I GI
Sbjct: 223 YEDALRMVREMGTTDLKPDSFTLSSVLP------IFSEYVDVIKGKEIHGYVIRKGIDSD 276
Query: 307 ----GCMVDLLGRAGRLKEAYDLIKRM 329
+VD+ ++ R++++ + R+
Sbjct: 277 VYIGSSLVDMYAKSARIEDSERVFSRL 303
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 133/411 (32%), Positives = 222/411 (54%), Gaps = 12/411 (2%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
++ N+++ Y G+ +A VF EMP + V+W+ +I GF R G A F +
Sbjct: 140 DIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD 199
Query: 65 HELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVW----SSMVSGYCKKGSVAEA 120
E + T+ ++ R G + + + L+ +R + ++++ Y K +++A
Sbjct: 200 VE-PNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDA 258
Query: 121 ETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMR-AEGFEPDEFTVVSVLSACAQ 179
+FG + + WN+MI+G V + A+ F M+ + G +PD + SVLSACA
Sbjct: 259 MRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACAS 318
Query: 180 LGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAM 239
LG +D G+ +H I + + + + +VDMYAKCG + A +F G +N+ WNA+
Sbjct: 319 LGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNAL 378
Query: 240 ISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA--Y 297
+ G AI+G E L +F M L +P+ +TFL L+AC H GL+ E KM++ Y
Sbjct: 379 LGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREY 438
Query: 298 AIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSD-MKMAEQ 356
+ ++HYGCM+DLL RAG L EA +L+K MP++P+ + GA+L AC+ M++ ++
Sbjct: 439 NLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKE 498
Query: 357 VIKLIGTNSITRADSH-NVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
++ I DS VLLSNI+AA+ +W+ ++R +M K+ G
Sbjct: 499 ILD--SFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPG 547
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 126/298 (42%), Gaps = 41/298 (13%)
Query: 135 WNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIE 194
+NT+++ Y + A++ + GF PD FT V AC + + GKQIH ++
Sbjct: 74 YNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVT 133
Query: 195 HKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLE 254
+ +V + LV Y CG+ NA VF R++ W +I+GF G +E L+
Sbjct: 134 KMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALD 193
Query: 255 FFGRMENLNIRPDAITFLTVLSACA-----------HGGLLSEALEVISKMEAYAIEMGI 303
F +M+ + P+ T++ VL + HG +L A + + I+M +
Sbjct: 194 TFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYV 250
Query: 304 K--------------------HYGCMVDLLGRAGRLKEAYDLIKRMP----MEPNETVLG 339
K + M+ L R KEA DL M ++P+ +L
Sbjct: 251 KCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILT 310
Query: 340 AMLGACRTHSDMKMAEQVIKLIGTNSITRADSH-NVLLSNIYAASEKWEKA-EKMRGI 395
++L AC + + V + I T I + D+H + ++YA E A E GI
Sbjct: 311 SVLSACASLGAVDHGRWVHEYILTAGI-KWDTHIGTAIVDMYAKCGYIETALEIFNGI 367
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 135/418 (32%), Positives = 221/418 (52%), Gaps = 28/418 (6%)
Query: 3 ERNVVTWNAMISGYMR----NGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARR 58
RN + +++ ++ N AS +F+ + + MI +R+ R
Sbjct: 40 HRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLR 99
Query: 59 LF---------DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVS 109
F D AP L T+ ++ + +++ + + F+ S V
Sbjct: 100 YFLLMVKEEEEDIAPSYL----TFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQ 155
Query: 110 G-----YCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFE 164
Y + + +A +F IP + W+ ++ GYV+ G G L+ F EM +G E
Sbjct: 156 TGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLE 215
Query: 165 PDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKR-LTVNPFVLSGLVDMYAKCGDLVNARL 223
PDEF+V + L+ACAQ+G L GK IH ++ K + + FV + LVDMYAKCG + A
Sbjct: 216 PDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVE 275
Query: 224 VFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLN-IRPDAITFLTVLSACAHGG 282
VF+ T+RN+ W A+I G+A G ++ + R+E + I+PD++ L VL+ACAHGG
Sbjct: 276 VFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGG 335
Query: 283 LLSEALEVISKMEA-YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAM 341
L E ++ MEA Y I +HY C+VDL+ RAGRL +A +LI++MPM+P +V GA+
Sbjct: 336 FLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGAL 395
Query: 342 LGACRTHSDMKMAEQVIK---LIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIM 396
L CRTH ++++ E +K + ++ ++ V LSNIY + ++ +A K+RG++
Sbjct: 396 LNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMI 453
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 55/259 (21%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEM------PGKTGVTWSQMIGGFARNGDTA 54
+P+ +VV W+ +++GY+R G VF EM P + VT + + A+ G A
Sbjct: 178 IPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTA--LTACAQVGALA 235
Query: 55 TARRLFDEAPHELKGVVTW--------TVMVDGYARKGEMEAAREVFELMPERNCFVWSS 106
+ + HE +W T +VD YA+ G +E A EVF+ + RN F W++
Sbjct: 236 QGKWI-----HEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAA 290
Query: 107 MVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEM-RAEGFEP 165
++ GY A Y G+ ++A+ E + R +G +P
Sbjct: 291 LIGGY----------------------------AAY---GYAKKAMTCLERLEREDGIKP 319
Query: 166 DEFTVVSVLSACAQLGLLDAGKQIHHMIEHK-RLTVNPFVLSGLVDMYAKCGDLVNARLV 224
D ++ VL+ACA G L+ G+ + +E + +T S +VD+ + G L +A +
Sbjct: 320 DSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNL 379
Query: 225 FEGFTQRNIC-CWNAMISG 242
E + + W A+++G
Sbjct: 380 IEKMPMKPLASVWGALLNG 398
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 137/414 (33%), Positives = 224/414 (54%), Gaps = 25/414 (6%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF-- 60
+ ++ +A+I Y G +E A VF+E+P + V+W+ MI G+ NG+ A LF
Sbjct: 108 QSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKD 167
Query: 61 ---------DEAPHELKGVVTWTVMVDGYARKGEMEAARE-VFELMPERNCFVWSSMVSG 110
D + G+V+ KG E+ V + +R V ++++
Sbjct: 168 LLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDA 227
Query: 111 YCK--KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEM-RAEGFEPDE 167
Y K +G VA A IF +I + +N++++ Y Q+G A + F + + + +
Sbjct: 228 YAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNA 287
Query: 168 FTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEG 227
T+ +VL A + G L GK IH + L + V + ++DMY KCG + AR F+
Sbjct: 288 ITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDR 347
Query: 228 FTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEA 287
+N+ W AMI+G+ ++G + LE F M + +RP+ ITF++VL+AC+H GL E
Sbjct: 348 MKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEG 407
Query: 288 LEVISKMEA-YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACR 346
+ M+ + +E G++HYGCMVDLLGRAG L++AYDLI+RM M+P+ + ++L ACR
Sbjct: 408 WRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACR 467
Query: 347 THSDMKMAEQVIKLIGTNSITRADSHN----VLLSNIYAASEKWEKAEKMRGIM 396
H ++++AE I + DS N +LLS+IYA + +W+ E++R IM
Sbjct: 468 IHKNVELAE-----ISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIM 516
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 160/338 (47%), Gaps = 36/338 (10%)
Query: 18 RNGDMESASLVFEEMPGKTGV-TWSQMIGGFARNGDTATARRLFDEA------------P 64
R+ + ++ + +F KT V +W+ +I AR+GD+A A F P
Sbjct: 21 RHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFP 80
Query: 65 HELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIF 124
+K + + D ++ K + ++ F + + FV S+++ Y G + +A +F
Sbjct: 81 CAIKACSS---LFDIFSGK---QTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVF 134
Query: 125 GRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDE------FTVVSVLSACA 178
IP R++ W +MI GY NG A+ F+++ + + D+ +VSV+SAC+
Sbjct: 135 DEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACS 194
Query: 179 QLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGD--LVNARLVFEGFTQRNICCW 236
++ + IH + + V + L+D YAK G+ + AR +F+ ++ +
Sbjct: 195 RVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSY 254
Query: 237 NAMISGFAINGKCREVLEFFGRM-ENLNIRPDAITFLTVLSACAHGGLLSEALEVISKME 295
N+++S +A +G E E F R+ +N + +AIT TVL A +H G AL + +
Sbjct: 255 NSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSG----ALRIGKCIH 310
Query: 296 AYAIEMGIKHY----GCMVDLLGRAGRLKEAYDLIKRM 329
I MG++ ++D+ + GR++ A RM
Sbjct: 311 DQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRM 348
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 225 bits (573), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 141/477 (29%), Positives = 231/477 (48%), Gaps = 88/477 (18%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEM------PGK------------------- 35
MPER++V+WN+MISGY+ GD S+ ++F+EM P +
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMG 250
Query: 36 -------------TG--VTWSQMIGGFARNGDTATARRLFDEAPHELKGVVTWTVMVDGY 80
TG + + ++ +++ G+ + A R+F+ + +V W VM+ Y
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQ--RNIVAWNVMIGCY 308
Query: 81 ARKGEMEAAREVFELMPERNCF------------------------------------VW 104
AR G + A F+ M E+N +
Sbjct: 309 ARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLE 368
Query: 105 SSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFE 164
++++ Y + G + AE IF R+ +++ WN++IA YVQNG AL+ F+E+
Sbjct: 369 TALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLV 428
Query: 165 PDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLV 224
PD T+ S+L A A+ L G++IH I R N +L+ LV MYA CGDL +AR
Sbjct: 429 PDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKC 488
Query: 225 FEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLL 284
F +++ WN++I +A++G R + F M + P+ TF ++L+AC+ G++
Sbjct: 489 FNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMV 548
Query: 285 SEALEVISKME-AYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLG 343
E E M+ Y I+ GI+HYGCM+DL+GR G A ++ MP P + G++L
Sbjct: 549 DEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLN 608
Query: 344 ACRTHSDMKM----AEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIM 396
A R H D+ + AEQ+ K+ N+ VLL N+YA + +WE +++ +M
Sbjct: 609 ASRNHKDITIAEFAAEQIFKMEHDNT-----GCYVLLLNMYAEAGRWEDVNRIKLLM 660
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 181/363 (49%), Gaps = 29/363 (7%)
Query: 13 ISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKGV-- 70
+ G+ + ME A +F+EM W+ MI GF G A + + GV
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMV--FAGVKA 128
Query: 71 --VTWTVMVDGYARKGEMEAAREVFELMPE----RNCFVWSSMVSGYCKKGSVAEAETIF 124
T+ ++ A +E +++ ++ + + +V +S++S Y K G +AE +F
Sbjct: 129 DTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVF 188
Query: 125 GRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLD 184
+P R + WN+MI+GY+ G G +L F+EM GF+PD F+ +S L AC+ +
Sbjct: 189 EEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPK 248
Query: 185 AGKQIH-HMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGF 243
GK+IH H + + T + V++ ++DMY+K G++ A +F G QRNI WN MI +
Sbjct: 249 MGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCY 308
Query: 244 AINGKCREVLEFFGRMENLN-IRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMG 302
A NG+ + F +M N ++PD IT + +L A A LE + YA+ G
Sbjct: 309 ARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA-------ILEG-RTIHGYAMRRG 360
Query: 303 IKHY----GCMVDLLGRAGRLKEAYDLIKRMPMEPN----ETVLGAMLGACRTHSDMKMA 354
+ ++D+ G G+LK A + RM E N +++ A + + +S +++
Sbjct: 361 FLPHMVLETALIDMYGECGQLKSAEVIFDRMA-EKNVISWNSIIAAYVQNGKNYSALELF 419
Query: 355 EQV 357
+++
Sbjct: 420 QEL 422
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 146/294 (49%), Gaps = 12/294 (4%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE-- 62
+V N++IS YM+ G A VFEEMP + V+W+ MI G+ GD ++ LF E
Sbjct: 164 DVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEML 223
Query: 63 ----APHELKGVVTWTVMVDGYARK-GEMEAAREVFELMPERNCFVWSSMVSGYCKKGSV 117
P + Y+ K G+ V + + V +S++ Y K G V
Sbjct: 224 KCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEV 283
Query: 118 AEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAE-GFEPDEFTVVSVLSA 176
+ AE IF + R++ WN MI Y +NG A F++M + G +PD T +++L A
Sbjct: 284 SYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA 343
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
A L G+ IH + + + + L+DMY +CG L +A ++F+ ++N+ W
Sbjct: 344 SAIL----EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISW 399
Query: 237 NAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEV 290
N++I+ + NGK LE F + + ++ PD+ T ++L A A LSE E+
Sbjct: 400 NSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREI 453
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 91/191 (47%)
Query: 90 REVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGE 149
R+ +++ + N + + G+ + +A +F + +WN MI G+ G
Sbjct: 53 RDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYI 112
Query: 150 RALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLV 209
A+Q + M G + D FT V+ + A + L+ GK+IH M+ + +V + L+
Sbjct: 113 EAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLI 172
Query: 210 DMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAI 269
+Y K G +A VFE +R+I WN+MISG+ G L F M +PD
Sbjct: 173 SLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRF 232
Query: 270 TFLTVLSACAH 280
+ ++ L AC+H
Sbjct: 233 STMSALGACSH 243
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 224 bits (572), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 124/358 (34%), Positives = 196/358 (54%), Gaps = 16/358 (4%)
Query: 55 TARRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKK 114
T RR FD PH G+++ YA G +++ +VF +P + ++MV+ +
Sbjct: 134 TIRRGFDNDPHVQTGLISL------YAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARC 187
Query: 115 GSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVL 174
G V A +F +P R WN MI+GY Q G AL F M+ EG + + ++SVL
Sbjct: 188 GDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVL 247
Query: 175 SACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNIC 234
SAC QLG LD G+ H IE ++ + + + LVD+YAKCGD+ A VF G ++N+
Sbjct: 248 SACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVY 307
Query: 235 CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM 294
W++ ++G A+NG + LE F M+ + P+A+TF++VL C+ G + E M
Sbjct: 308 TWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSM 367
Query: 295 E-AYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKM 353
+ IE ++HYGC+VDL RAGRL++A +I++MPM+P+ V ++L A R + ++++
Sbjct: 368 RNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLEL 427
Query: 354 AEQVIKLIGTNSITRADSHN----VLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
++ + + ++ N VLLSNIYA S W+ +R M K GC
Sbjct: 428 G-----VLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGC 480
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 114/240 (47%), Gaps = 33/240 (13%)
Query: 120 AETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEG--FEPDEFTVVSVLSAC 177
A I R +L N+MI + ++ E++ + + + G +PD +TV ++ AC
Sbjct: 59 ANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQAC 118
Query: 178 AQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMY------------------------- 212
L + + G Q+H M + +P V +GL+ +Y
Sbjct: 119 TGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRT 178
Query: 213 ------AKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRP 266
A+CGD+V AR +FEG +R+ WNAMISG+A G+ RE L F M+ ++
Sbjct: 179 AMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKV 238
Query: 267 DAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLI 326
+ + ++VLSAC G L + S +E I++ ++ +VDL + G +++A ++
Sbjct: 239 NGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVF 298
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 12 MISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKGVV 71
+IS Y G ++S VF +P V + M+ AR GD AR+LF+ P + +
Sbjct: 149 LISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPE--RDPI 206
Query: 72 TWTVMVDGYARKGEMEAAREVFELMP---------------------------------- 97
W M+ GYA+ GE A VF LM
Sbjct: 207 AWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYI 266
Query: 98 ERNCF-----VWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERAL 152
ERN + +++V Y K G + +A +F + +++ W++ + G NGFGE+ L
Sbjct: 267 ERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCL 326
Query: 153 QAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFV--LSGLVD 210
+ F M+ +G P+ T VSVL C+ +G +D G Q H + P + LVD
Sbjct: 327 ELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG-QRHFDSMRNEFGIEPQLEHYGCLVD 385
Query: 211 MYAKCGDLVNARLVFEGFTQR-NICCWNAMI 240
+YA+ G L +A + + + + W++++
Sbjct: 386 LYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 224 bits (571), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 136/444 (30%), Positives = 224/444 (50%), Gaps = 49/444 (11%)
Query: 10 NAMISGYMRNGDMESASLVFEEMP--GKTGVTWSQMIGGFARNGDTATARRLFDEAPHE- 66
NA+ Y +G+M +A +F+E+P K V W+ ++ F+R G + +LF E +
Sbjct: 47 NALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKR 106
Query: 67 ------------------------------------LKGVVTWTVMVDGYARKGEMEAAR 90
L V ++D Y + G + +
Sbjct: 107 VEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVK 166
Query: 91 EVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGER 150
+FE + E++ W+ ++ K + +F +P R+ W M+AGY+ GF
Sbjct: 167 RIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTRE 226
Query: 151 ALQAFEEMRAE-GFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTV-------NP 202
L+ EM G + T+ S+LSACAQ G L G+ +H K + + +
Sbjct: 227 VLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDV 286
Query: 203 FVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENL 262
V + LVDMYAKCG++ ++ VF +RN+ WNA+ SG A++GK R V++ F +M
Sbjct: 287 MVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR- 345
Query: 263 NIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEA 322
++PD +TF VLSAC+H G++ E + Y +E + HY CMVDLLGRAG ++EA
Sbjct: 346 EVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEA 405
Query: 323 YDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAA 382
L++ MP+ PNE VLG++LG+C H +++AE++ + + S + + +L+SN+Y A
Sbjct: 406 EILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTE-YQILMSNMYVA 464
Query: 383 SEKWEKAEKMRGIMVDGESEKIAG 406
+ + A+ +RG + KI G
Sbjct: 465 EGRSDIADGLRGSLRKRGIRKIPG 488
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 131/416 (31%), Positives = 223/416 (53%), Gaps = 21/416 (5%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE-- 62
++V N +++ Y + G +E A VFE+MP + VTW+ +I G++++ A F++
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML 153
Query: 63 ----APHELKGVVTWTVMVDGYARKGEMEAAREVF--ELMPERNCFVWSSMVSGYCKKGS 116
+P+E ++ + R+G F + + N V S+++ Y + G
Sbjct: 154 RFGYSPNEF--TLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGL 211
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+ +A+ +F + R+ WN +IAG+ + E+AL+ F+ M +GF P F+ S+ A
Sbjct: 212 MDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGA 271
Query: 177 CAQLGLLDAGKQIH-HMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICC 235
C+ G L+ GK +H +MI+ V F + L+DMYAK G + +AR +F+ +R++
Sbjct: 272 CSSTGFLEQGKWVHAYMIKSGEKLV-AFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVS 330
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKME 295
WN++++ +A +G +E + +F M + IRP+ I+FL+VL+AC+H GLL E M+
Sbjct: 331 WNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMK 390
Query: 296 AYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKM-- 353
I HY +VDLLGRAG L A I+ MP+EP + A+L ACR H + ++
Sbjct: 391 KDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGA 450
Query: 354 --AEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
AE V +L + +V+L NIYA+ +W A ++R M + +K C
Sbjct: 451 YAAEHVFELDPDDP-----GPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPAC 501
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 147/310 (47%), Gaps = 14/310 (4%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
+ NV +A++ Y R G M+ A LVF+ + + V+W+ +I G AR T A LF
Sbjct: 193 DSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQG 252
Query: 63 APHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPERN----CFVWSSMVSGYCKKGS 116
+ ++ + + G +E + V M + F ++++ Y K GS
Sbjct: 253 MLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGS 312
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+ +A IF R+ R + WN+++ Y Q+GFG+ A+ FEEMR G P+E + +SVL+A
Sbjct: 313 IHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTA 372
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA-RLVFEGFTQRNICC 235
C+ GLLD G + +++ + + +VD+ + GDL A R + E +
Sbjct: 373 CSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAI 432
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVL-SACAHGGLLSEALEVISKM 294
W A+++ ++ L + + PD +L + A GG ++A V KM
Sbjct: 433 WKALLNACRMHKNTE--LGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKM 490
Query: 295 EAYAIEMGIK 304
+ E G+K
Sbjct: 491 K----ESGVK 496
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/404 (33%), Positives = 210/404 (51%), Gaps = 46/404 (11%)
Query: 43 MIGGFARNGDTATARRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELM------ 96
+I + + A +LFD+ P + V++WT M+ Y++ + A E+ LM
Sbjct: 102 LINMYVKFNLLNDAHQLFDQMPQ--RNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 97 P------------------------------ERNCFVWSSMVSGYCKKGSVAEAETIFGR 126
P E + FV S+++ + K G +A ++F
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDE 219
Query: 127 IPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAG 186
+ +WN++I G+ QN + AL+ F+ M+ GF ++ T+ SVL AC L LL+ G
Sbjct: 220 MVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG 279
Query: 187 KQIH-HMIEHKR-LTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFA 244
Q H H++++ + L +N + LVDMY KCG L +A VF +R++ W+ MISG A
Sbjct: 280 MQAHVHIVKYDQDLILN----NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLA 335
Query: 245 INGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA-YAIEMGI 303
NG +E L+ F RM++ +P+ IT + VL AC+H GLL + M+ Y I+
Sbjct: 336 QNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVR 395
Query: 304 KHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGT 363
+HYGCM+DLLG+AG+L +A L+ M EP+ +LGACR +M +AE K +
Sbjct: 396 EHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIA 455
Query: 364 NSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
A ++ LLSNIYA S+KW+ E++R M D +K GC
Sbjct: 456 LDPEDAGTYT-LLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGC 498
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 131/283 (46%), Gaps = 43/283 (15%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
E +V +A+I + + G+ E A VF+EM + W+ +IGGFA+N + A LF
Sbjct: 191 ESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKR 250
Query: 63 APHELKGVVTWTVMVDGYARKG------EMEAAREVFELMPERNCFVWSSMVSGYCKKGS 116
G + + R E+ V + +++ + +++V YCK GS
Sbjct: 251 MKR--AGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGS 308
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+ +A +F ++ R + W+TMI+G QNG+ + AL+ FE M++ G +P+ T+V VL A
Sbjct: 309 LEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFA 368
Query: 177 CAQLGLLDAGKQIHHMIEHKRLT-VNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICC 235
C+ GLL+ G ++ K+L ++P V E +
Sbjct: 369 CSHAGLLEDG--WYYFRSMKKLYGIDP---------------------VREHY------- 398
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSAC 278
MI GK + ++ ME PDA+T+ T+L AC
Sbjct: 399 -GCMIDLLGKAGKLDDAVKLLNEME---CEPDAVTWRTLLGAC 437
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 116/228 (50%), Gaps = 5/228 (2%)
Query: 102 FVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAE 161
F+ + +++ Y K + +A +F ++P R++ W TMI+ Y + ++AL+ M +
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 162 GFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA 221
P+ +T SVL +C G+ D + +H I + L + FV S L+D++AK G+ +A
Sbjct: 157 NVRPNVYTYSSVLRSCN--GMSDV-RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDA 213
Query: 222 RLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHG 281
VF+ + WN++I GFA N + LE F RM+ + T +VL AC
Sbjct: 214 LSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL 273
Query: 282 GLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM 329
LL ++ + Y ++ + + +VD+ + G L++A + +M
Sbjct: 274 ALLELGMQAHVHIVKYDQDLILNN--ALVDMYCKCGSLEDALRVFNQM 319
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 138/434 (31%), Positives = 213/434 (49%), Gaps = 40/434 (9%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGV-----TWSQMIGG---FARNGD 52
M ERNV+TW AMI GY + G E +F M + V T + M F R +
Sbjct: 234 MTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYRE 293
Query: 53 TATARRLFDEAPHEL------------------------------KGVVTWTVMVDGYAR 82
+ L P E K V+W ++ G +
Sbjct: 294 GSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQ 353
Query: 83 KGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGY 142
+ ++ A E+FE MP ++ W+ M+ G+ KG +++ +FG +P + W MI+ +
Sbjct: 354 RKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAF 413
Query: 143 VQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNP 202
V NG+ E AL F +M + P+ +T SVLSA A L L G QIH + + +
Sbjct: 414 VSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDL 473
Query: 203 FVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENL 262
V + LV MY KCG+ +A +F ++ NI +N MISG++ NG ++ L+ F +E+
Sbjct: 474 SVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESS 533
Query: 263 NIRPDAITFLTVLSACAHGGLLSEALEVISKME-AYAIEMGIKHYGCMVDLLGRAGRLKE 321
P+ +TFL +LSAC H G + + M+ +Y IE G HY CMVDLLGR+G L +
Sbjct: 534 GKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDD 593
Query: 322 AYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYA 381
A +LI MP +P+ V G++L A +TH + +AE K + A + V+LS +Y+
Sbjct: 594 ASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPY-VVLSQLYS 652
Query: 382 ASEKWEKAEKMRGI 395
K +++ I
Sbjct: 653 IIGKNRDCDRIMNI 666
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 180/383 (46%), Gaps = 14/383 (3%)
Query: 1 MPERNVVTWNAMISGYMRNG-DMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRL 59
MP R ++NAMI+ ++N D+ A +F ++P K V+++ MI GF R G A L
Sbjct: 107 MPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFL 166
Query: 60 FDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAE 119
+ E P + + V V++ GY R G+ A VF+ M + SSMV GYCK G + +
Sbjct: 167 YAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVD 226
Query: 120 AETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEG-FEPDEFTVVSVLSACA 178
A ++F R+ R++ W MI GY + GF E F MR EG + + T+ + AC
Sbjct: 227 ARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACR 286
Query: 179 QLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNA 238
G QIH ++ L + F+ + L+ MY+K G + A+ VF ++ WN+
Sbjct: 287 DFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNS 346
Query: 239 MISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYA 298
+I+G + E E F +M D +++ ++ + G +S+ +E+ M
Sbjct: 347 LITGLVQRKQISEAYELFEKMPG----KDMVSWTDMIKGFSGKGEISKCVELFGMMP--- 399
Query: 299 IEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME---PNETVLGAMLGACRTHSDMKMAE 355
E + M+ G +EA +M + PN ++L A + +D+
Sbjct: 400 -EKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGL 458
Query: 356 QVI-KLIGTNSITRADSHNVLLS 377
Q+ +++ N + N L+S
Sbjct: 459 QIHGRVVKMNIVNDLSVQNSLVS 481
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 138/331 (41%), Gaps = 58/331 (17%)
Query: 58 RLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSV 117
R F E + + +AR G ++ A +F M R+ W +M+S Y + G +
Sbjct: 38 RNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKM 97
Query: 118 AEAETIFGRIPVRSLEIWNTMIAGYVQN------------GFGERALQAFEEM-----RA 160
++A +F +PVR +N MI ++N E+ ++ M RA
Sbjct: 98 SKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRA 157
Query: 161 EGFEPDEFTVV--------SVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFV-LSGLVDM 211
F+ EF SV S G L AGK + + + V V S +V
Sbjct: 158 GRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHG 217
Query: 212 YAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRM-ENLNIRPDAIT 270
Y K G +V+AR +F+ T+RN+ W AMI G+ G + F RM + +++ ++ T
Sbjct: 218 YCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNT 277
Query: 271 FLTVLSAC-----------AHGGLLSEALE-----------VISKM----EAYAIEMGIK 304
+ AC HG + LE + SK+ EA A+ +K
Sbjct: 278 LAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMK 337
Query: 305 H-----YGCMVDLLGRAGRLKEAYDLIKRMP 330
+ + ++ L + ++ EAY+L ++MP
Sbjct: 338 NKDSVSWNSLITGLVQRKQISEAYELFEKMP 368
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 119/316 (37%), Positives = 189/316 (59%), Gaps = 14/316 (4%)
Query: 100 NCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMR 159
+ +V +++V+ Y K G + A +F R+P +S+ WN++++G+ QNG + A+Q F +MR
Sbjct: 141 DTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMR 200
Query: 160 AEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLV 219
GFEPD T VS+LSACAQ G + G +H I + L +N + + L+++Y++CGD+
Sbjct: 201 ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVG 260
Query: 220 NARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRME-NLNIRPDAITFLTVLSAC 278
AR VF+ + N+ W AMIS + +G ++ +E F +ME + P+ +TF+ VLSAC
Sbjct: 261 KAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSAC 320
Query: 279 AHGGLLSEALEVISKM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETV 337
AH GL+ E V +M ++Y + G++H+ CMVD+LGRAG L EAY I ++ T
Sbjct: 321 AHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATA 380
Query: 338 LG---AMLGACRTHSD----MKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAE 390
AMLGAC+ H + +++A+++I L N H+V+LSNIYA S K ++
Sbjct: 381 PALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNP-----GHHVMLSNIYALSGKTDEVS 435
Query: 391 KMRGIMVDGESEKIAG 406
+R M+ K G
Sbjct: 436 HIRDGMMRNNLRKQVG 451
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 126/250 (50%), Gaps = 1/250 (0%)
Query: 99 RNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEM 158
R+ + + +++ C ++A +F +P+ ++N++I + + + M
Sbjct: 39 RSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRM 98
Query: 159 RAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDL 218
+ P +T SV+ +CA L L GK +H ++ +V + LV Y+KCGD+
Sbjct: 99 LSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDM 158
Query: 219 VNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSAC 278
AR VF+ +++I WN+++SGF NG E ++ F +M PD+ TF+++LSAC
Sbjct: 159 EGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSAC 218
Query: 279 AHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVL 338
A G +S V + + +++ +K +++L R G + +A ++ +M E N
Sbjct: 219 AQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMK-ETNVAAW 277
Query: 339 GAMLGACRTH 348
AM+ A TH
Sbjct: 278 TAMISAYGTH 287
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 120/225 (53%), Gaps = 20/225 (8%)
Query: 11 AMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF---DEAPHEL 67
A+++ Y + GDME A VF+ MP K+ V W+ ++ GF +NG A ++F E+ E
Sbjct: 147 ALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEP 206
Query: 68 KGVVTWTVMVDGYARKGEMEAAREVFELMP----ERNCFVWSSMVSGYCKKGSVAEAETI 123
T+ ++ A+ G + V + + + N + +++++ Y + G V +A +
Sbjct: 207 DS-ATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREV 265
Query: 124 FGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAE-GFEPDEFTVVSVLSACAQLGL 182
F ++ ++ W MI+ Y +G+G++A++ F +M + G P+ T V+VLSACA GL
Sbjct: 266 FDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGL 325
Query: 183 LDAGKQIHHMIEHKRLTVNPFVLSG------LVDMYAKCGDLVNA 221
++ G+ + +KR+T + ++ G +VDM + G L A
Sbjct: 326 VEEGRSV-----YKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEA 365
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 135/398 (33%), Positives = 216/398 (54%), Gaps = 11/398 (2%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
N+ NAM S Y+R G A VF M +GV ++ A + + L+ ++
Sbjct: 301 NLDLCNAMASNYVRQGLTREALGVFNLMM-DSGVRPDRISMLSAISSCSQLRNILWGKSC 359
Query: 65 HEL---KGVVTW----TVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSV 117
H G +W ++D Y + + A +F+ M + W+S+V+GY + G V
Sbjct: 360 HGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEV 419
Query: 118 AEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRA-EGFEPDEFTVVSVLSA 176
A F +P +++ WNT+I+G VQ E A++ F M++ EG D T++S+ SA
Sbjct: 420 DAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASA 479
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
C LG LD K I++ IE + ++ + + LVDM+++CGD +A +F T R++ W
Sbjct: 480 CGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAW 539
Query: 237 NAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVI-SKME 295
A I A+ G +E F M ++PD + F+ L+AC+HGGL+ + E+ S ++
Sbjct: 540 TAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLK 599
Query: 296 AYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAE 355
+ + HYGCMVDLLGRAG L+EA LI+ MPMEPN+ + ++L ACR +++MA
Sbjct: 600 LHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAA 659
Query: 356 QVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMR 393
+ I + R S+ VLLSN+YA++ +W K+R
Sbjct: 660 YAAEKIQVLAPERTGSY-VLLSNVYASAGRWNDMAKVR 696
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 145/300 (48%), Gaps = 11/300 (3%)
Query: 4 RNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEA 63
+++ N+++ Y G+++SA VF+EM + V+W+ MI G+AR A LF
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 64 PHE---LKGVVTWTVMVDGYARKGEMEAAREVFELMP----ERNCFVWSSMVSGYCKKGS 116
+ VT ++ A+ ++E +V+ + E N + S++V Y K +
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA 286
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+ A+ +F +L++ N M + YV+ G AL F M G PD +++S +S+
Sbjct: 287 IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISS 346
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
C+QL + GK H + + + L+DMY KC A +F+ + + + W
Sbjct: 347 CSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTW 406
Query: 237 NAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA 296
N++++G+ NG+ E F M NI +++ T++S G L EA+EV M++
Sbjct: 407 NSIVAGYVENGEVDAAWETFETMPEKNI----VSWNTIISGLVQGSLFEEAIEVFCSMQS 462
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 160/337 (47%), Gaps = 41/337 (12%)
Query: 9 WNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELK 68
+N++I GY +G A L+F M +G++ + F G +A A+ ++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMM-NSGISPDKYTFPF---GLSACAKSRAKGNGIQIH 157
Query: 69 GVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIP 128
G++ GYA+ + FV +S+V Y + G + A +F +
Sbjct: 158 GLIVKM----GYAK-----------------DLFVQNSLVHFYAECGELDSARKVFDEMS 196
Query: 129 VRSLEIWNTMIAGYVQNGFGERALQAFEEM-RAEGFEPDEFTVVSVLSACAQLGLLDAGK 187
R++ W +MI GY + F + A+ F M R E P+ T+V V+SACA+L L+ G+
Sbjct: 197 ERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGE 256
Query: 188 QIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAING 247
+++ I + + VN ++S LVDMY KC + A+ +F+ + N+ NAM S + G
Sbjct: 257 KVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQG 316
Query: 248 KCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVI--SKMEAYAIEMGIKH 305
RE L F M + +RPD I+ L+ +S+C S+ ++ Y + G +
Sbjct: 317 LTREALGVFNLMMDSGVRPDRISMLSAISSC------SQLRNILWGKSCHGYVLRNGFES 370
Query: 306 Y----GCMVDLLGRAGRLKEAYDLIKRMPMEPNETVL 338
+ ++D+ + R A+ + RM N+TV+
Sbjct: 371 WDNICNALIDMYMKCHRQDTAFRIFDRM---SNKTVV 404
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 103/197 (52%), Gaps = 5/197 (2%)
Query: 134 IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMI 193
++N++I GY +G A+ F M G PD++T LSACA+ G QIH +I
Sbjct: 101 MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 194 EHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVL 253
+ FV + LV YA+CG+L +AR VF+ ++RN+ W +MI G+A ++ +
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 254 EFFGRM-ENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDL 312
+ F RM + + P+++T + V+SACA E LE K+ A+ GI+ MV
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAK----LEDLETGEKVYAFIRNSGIEVNDLMVSA 276
Query: 313 LGRAGRLKEAYDLIKRM 329
L A D+ KR+
Sbjct: 277 LVDMYMKCNAIDVAKRL 293
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 125/258 (48%), Gaps = 11/258 (4%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
M + VVTWN++++GY+ NG++++A FE MP K V+W+ +I G + A +F
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457
Query: 61 DEAPHELKGV----VTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYC 112
+ +GV VT + G ++ A+ ++ + + + + +++V +
Sbjct: 458 CSMQSQ-EGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFS 516
Query: 113 KKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVS 172
+ G A +IF + R + W I G ERA++ F++M +G +PD V
Sbjct: 517 RCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVG 576
Query: 173 VLSACAQLGLLDAGKQI-HHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT-Q 230
L+AC+ GL+ GK+I + M++ ++ +VD+ + G L A + E +
Sbjct: 577 ALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPME 636
Query: 231 RNICCWNAMISGFAINGK 248
N WN++++ + G
Sbjct: 637 PNDVIWNSLLAACRVQGN 654
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 134/403 (33%), Positives = 213/403 (52%), Gaps = 41/403 (10%)
Query: 1 MPERNVVTWNAMISGYMRNG-DMESASLVFEEMPGKTGVTWSQMIGGFA-----RNGDTA 54
M ER+VV+WN MIS +++NG D E LV+E + + + + RN +
Sbjct: 379 MRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIG 438
Query: 55 TARRLF-DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCK 113
F + +G+ ++ ++D Y++ G + ++++FE SGY +
Sbjct: 439 KQTHAFLIRQGIQFEGMNSY--LIDMYSKSGLIRISQKLFE-------------GSGYAE 483
Query: 114 KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSV 173
R WN+MI+GY QNG E+ F +M + P+ TV S+
Sbjct: 484 ----------------RDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASI 527
Query: 174 LSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNI 233
L AC+Q+G +D GKQ+H + L N FV S LVDMY+K G + A +F +RN
Sbjct: 528 LPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNS 587
Query: 234 CCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISK 293
+ MI G+ +G + F M+ I+PDAITF+ VLSAC++ GL+ E L++ +
Sbjct: 588 VTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEE 647
Query: 294 M-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVL-GAMLGACRTHSDM 351
M E Y I+ +HY C+ D+LGR GR+ EAY+ +K + E N L G++LG+C+ H ++
Sbjct: 648 MREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGEL 707
Query: 352 KMAEQVI-KLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMR 393
++AE V +L + + VLLSN+YA +KW+ +K+R
Sbjct: 708 ELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVR 750
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 185/371 (49%), Gaps = 22/371 (5%)
Query: 4 RNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEA 63
+++ ++ IS Y GD+ES+ VF+ + W+ MIG + +N + LF EA
Sbjct: 249 KDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEA 308
Query: 64 PHELKGV---VTWTVMVDGYARKGEMEAARE----VFELMPERNCFVWSSMVSGYCKKGS 116
+ V VT+ + + ++E R+ V + E + +S++ Y + GS
Sbjct: 309 IGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGS 368
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
V ++ +F + R + WNTMI+ +VQNG + L EM+ +GF+ D TV ++LSA
Sbjct: 369 VHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSA 428
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFE--GFTQRNIC 234
+ L + GKQ H + + + + S L+DMY+K G + ++ +FE G+ +R+
Sbjct: 429 ASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQA 487
Query: 235 CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM 294
WN+MISG+ NG + F +M NIRP+A+T ++L AC+ G ++++ ++
Sbjct: 488 TWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIG----SVDLGKQL 543
Query: 295 EAYAIEMGIKH----YGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSD 350
++I + +VD+ +AG +K A D+ + + T +LG +
Sbjct: 544 HGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILG----YGQ 599
Query: 351 MKMAEQVIKLI 361
M E+ I L
Sbjct: 600 HGMGERAISLF 610
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 148/312 (47%), Gaps = 16/312 (5%)
Query: 28 VFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPH-ELK-GVVTWTVMVDGYARKGE 85
VF+ M K V W+ +I + + G A A R F E+K V++ + +
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRS 229
Query: 86 MEAAREVFELMPE------RNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMI 139
++ A + LM + ++ FV SS +S Y + G + + +F R++E+WNTMI
Sbjct: 230 IKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMI 289
Query: 140 AGYVQNGFGERALQAF-EEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRL 198
YVQN +++ F E + ++ DE T + SA + L ++ G+Q H +
Sbjct: 290 GVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFR 349
Query: 199 TVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGR 258
+ +++ L+ MY++CG + + VF +R++ WN MIS F NG E L
Sbjct: 350 ELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYE 409
Query: 259 MENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGC---MVDLLGR 315
M+ + D IT +LSA ++ E+ + A+ I GI+ G ++D+ +
Sbjct: 410 MQKQGFKIDYITVTALLSAASN----LRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSK 465
Query: 316 AGRLKEAYDLIK 327
+G ++ + L +
Sbjct: 466 SGLIRISQKLFE 477
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 90/183 (49%), Gaps = 10/183 (5%)
Query: 106 SMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMR--AEGF 163
S +S C+ G+ A +F IP + +WNT+I G++ N AL + M+ A
Sbjct: 44 SRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFT 103
Query: 164 EPDEFTVVSVLSACAQLGLLDAGKQIH-HMIEHKRLTVNPFVLSGLVDMYAKCGDLVN-- 220
D +T S L ACA+ L AGK +H H+I + + V + L++MY C + +
Sbjct: 104 NCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQ-NSSRVVHNSLMNMYVSCLNAPDCF 162
Query: 221 ----ARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLS 276
R VF+ ++N+ WN +IS + G+ E FG M + ++P ++F+ V
Sbjct: 163 EYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFP 222
Query: 277 ACA 279
A +
Sbjct: 223 AVS 225
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 124/284 (43%), Gaps = 17/284 (5%)
Query: 13 ISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATA----RRLFDEAPHELK 68
+S ++G+ + A +F+ +P T V W+ +I GF N A R+ AP
Sbjct: 46 LSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNC 105
Query: 69 GVVTWTVMVDGYARKGEMEAAREV----FELMPERNCFVWSSMVSGYCKKGSVAE----- 119
T++ + A ++A + V + + V +S+++ Y + +
Sbjct: 106 DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYD 165
Query: 120 -AETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACA 178
+F + +++ WNT+I+ YV+ G A + F M +P + V+V A +
Sbjct: 166 VVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVS 225
Query: 179 QLGLLDAGKQIHHMIEH--KRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
+ + ++ + FV+S + MYA+ GD+ ++R VF+ +RNI W
Sbjct: 226 ISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVW 285
Query: 237 NAMISGFAINGKCREVLEFFGR-MENLNIRPDAITFLTVLSACA 279
N MI + N E +E F + + I D +T+L SA +
Sbjct: 286 NTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVS 329
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 138/420 (32%), Positives = 225/420 (53%), Gaps = 21/420 (5%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
M ++N ++ N +I+GY+R GD+ +A VF+EMP + TW+ MI G + LF
Sbjct: 20 MRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLF 79
Query: 61 DE------APHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYC 112
E +P E L V + + + + ++ + L E + V SS+ Y
Sbjct: 80 REMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGL--ELDLVVNSSLAHMYM 137
Query: 113 KKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVS 172
+ G + + E + +PVR+L WNT+I G QNG E L ++ M+ G P++ T V+
Sbjct: 138 RNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVT 197
Query: 173 VLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRN 232
VLS+C+ L + G+QIH + V+S L+ MY+KCG L +A F +
Sbjct: 198 VLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDED 257
Query: 233 ICCWNAMISGFAINGKCREVLEFFGRM-ENLNIRPDAITFLTVLSACAHGGLLSEALEVI 291
W++MIS + +G+ E +E F M E N+ + + FL +L AC+H GL + LE+
Sbjct: 258 EVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELF 317
Query: 292 SKM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSD 350
M E Y + G+KHY C+VDLLGRAG L +A +I+ MP++ + + +L AC H +
Sbjct: 318 DMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKN 377
Query: 351 MKMAEQVIKLIGTNSITRADSHN----VLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
+MA++V K I + D ++ VLL+N++A++++W ++R M D +K AG
Sbjct: 378 AEMAQRVFK-----EILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAG 432
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 143/312 (45%), Gaps = 44/312 (14%)
Query: 80 YARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMI 139
Y++ G+ +A V+ M ++N + +++GY + G + A +F +P R L WN MI
Sbjct: 4 YSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMI 63
Query: 140 AGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLT 199
AG +Q F E L F EM GF PDE+T+ SV S A L + G+QIH L
Sbjct: 64 AGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLE 123
Query: 200 VNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRM 259
++ V S L MY + G L + +V RN+ WN +I G A NG VL + M
Sbjct: 124 LDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMM 183
Query: 260 ENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMG-----------IKHY-- 306
+ RP+ ITF+TVLS+C+ + + ++ A AI++G I Y
Sbjct: 184 KISGCRPNKITFVTVLSSCSDLAIRGQGQQI----HAEAIKIGASSVVAVVSSLISMYSK 239
Query: 307 -GC---------------------MVDLLGRAGRLKEAYDLIKRMP----MEPNETVLGA 340
GC M+ G G+ EA +L M ME NE
Sbjct: 240 CGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLN 299
Query: 341 MLGACRTHSDMK 352
+L AC +HS +K
Sbjct: 300 LLYAC-SHSGLK 310
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 135/398 (33%), Positives = 216/398 (54%), Gaps = 11/398 (2%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
N+ NAM S Y+R G A VF M +GV ++ A + + L+ ++
Sbjct: 301 NLDLCNAMASNYVRQGLTREALGVFNLMM-DSGVRPDRISMLSAISSCSQLRNILWGKSC 359
Query: 65 HEL---KGVVTW----TVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSV 117
H G +W ++D Y + + A +F+ M + W+S+V+GY + G V
Sbjct: 360 HGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEV 419
Query: 118 AEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRA-EGFEPDEFTVVSVLSA 176
A F +P +++ WNT+I+G VQ E A++ F M++ EG D T++S+ SA
Sbjct: 420 DAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASA 479
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
C LG LD K I++ IE + ++ + + LVDM+++CGD +A +F T R++ W
Sbjct: 480 CGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAW 539
Query: 237 NAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVI-SKME 295
A I A+ G +E F M ++PD + F+ L+AC+HGGL+ + E+ S ++
Sbjct: 540 TAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLK 599
Query: 296 AYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAE 355
+ + HYGCMVDLLGRAG L+EA LI+ MPMEPN+ + ++L ACR +++MA
Sbjct: 600 LHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAA 659
Query: 356 QVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMR 393
+ I + R S+ VLLSN+YA++ +W K+R
Sbjct: 660 YAAEKIQVLAPERTGSY-VLLSNVYASAGRWNDMAKVR 696
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 145/300 (48%), Gaps = 11/300 (3%)
Query: 4 RNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEA 63
+++ N+++ Y G+++SA VF+EM + V+W+ MI G+AR A LF
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 64 PHE---LKGVVTWTVMVDGYARKGEMEAAREVFELMP----ERNCFVWSSMVSGYCKKGS 116
+ VT ++ A+ ++E +V+ + E N + S++V Y K +
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA 286
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+ A+ +F +L++ N M + YV+ G AL F M G PD +++S +S+
Sbjct: 287 IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISS 346
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
C+QL + GK H + + + L+DMY KC A +F+ + + + W
Sbjct: 347 CSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTW 406
Query: 237 NAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA 296
N++++G+ NG+ E F M NI +++ T++S G L EA+EV M++
Sbjct: 407 NSIVAGYVENGEVDAAWETFETMPEKNI----VSWNTIISGLVQGSLFEEAIEVFCSMQS 462
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 160/337 (47%), Gaps = 41/337 (12%)
Query: 9 WNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELK 68
+N++I GY +G A L+F M +G++ + F G +A A+ ++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMN-SGISPDKYTFPF---GLSACAKSRAKGNGIQIH 157
Query: 69 GVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIP 128
G++ GYA+ + FV +S+V Y + G + A +F +
Sbjct: 158 GLIVKM----GYAK-----------------DLFVQNSLVHFYAECGELDSARKVFDEMS 196
Query: 129 VRSLEIWNTMIAGYVQNGFGERALQAFEEM-RAEGFEPDEFTVVSVLSACAQLGLLDAGK 187
R++ W +MI GY + F + A+ F M R E P+ T+V V+SACA+L L+ G+
Sbjct: 197 ERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGE 256
Query: 188 QIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAING 247
+++ I + + VN ++S LVDMY KC + A+ +F+ + N+ NAM S + G
Sbjct: 257 KVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQG 316
Query: 248 KCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVI--SKMEAYAIEMGIKH 305
RE L F M + +RPD I+ L+ +S+C S+ ++ Y + G +
Sbjct: 317 LTREALGVFNLMMDSGVRPDRISMLSAISSC------SQLRNILWGKSCHGYVLRNGFES 370
Query: 306 Y----GCMVDLLGRAGRLKEAYDLIKRMPMEPNETVL 338
+ ++D+ + R A+ + RM N+TV+
Sbjct: 371 WDNICNALIDMYMKCHRQDTAFRIFDRM---SNKTVV 404
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 103/197 (52%), Gaps = 5/197 (2%)
Query: 134 IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMI 193
++N++I GY +G A+ F M G PD++T LSACA+ G QIH +I
Sbjct: 101 MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 194 EHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVL 253
+ FV + LV YA+CG+L +AR VF+ ++RN+ W +MI G+A ++ +
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 254 EFFGRM-ENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDL 312
+ F RM + + P+++T + V+SACA E LE K+ A+ GI+ MV
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAK----LEDLETGEKVYAFIRNSGIEVNDLMVSA 276
Query: 313 LGRAGRLKEAYDLIKRM 329
L A D+ KR+
Sbjct: 277 LVDMYMKCNAIDVAKRL 293
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 126/258 (48%), Gaps = 13/258 (5%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
M + VVTWN++++GY+ NG++++A FE MP K V+W+ +I G + A +F
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457
Query: 61 DEAPHELKGV----VTWTVMVDGYARKGEMEAAREVFELMPERNCF-----VWSSMVSGY 111
+ +GV VT + G ++ A+ ++ + E+N + +++V +
Sbjct: 458 CSMQSQ-EGVNADGVTMMSIASACGHLGALDLAKWIYYYI-EKNGIQLDVRLGTTLVDMF 515
Query: 112 CKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVV 171
+ G A +IF + R + W I G ERA++ F++M +G +PD V
Sbjct: 516 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 575
Query: 172 SVLSACAQLGLLDAGKQI-HHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT- 229
L+AC+ GL+ GK+I + M++ ++ +VD+ + G L A + E
Sbjct: 576 GALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPM 635
Query: 230 QRNICCWNAMISGFAING 247
+ N WN++++ + G
Sbjct: 636 EPNDVIWNSLLAACRVQG 653
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 221 bits (564), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 148/475 (31%), Positives = 219/475 (46%), Gaps = 81/475 (17%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIG----------- 45
+PE++ VT+N +I+GY ++G + +F +M + T+S ++
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALG 269
Query: 46 ----------GFARNGDTAT--------------ARRLFDEAPHELKGVVTWTVMVDGYA 81
GF+R+ R LFDE P EL V++ V++ Y+
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP-ELD-FVSYNVVISSYS 327
Query: 82 RKGEMEAAREVFELMP----ERNCFVWSSMVS---------------------------- 109
+ + EA+ F M +R F +++M+S
Sbjct: 328 QADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILH 387
Query: 110 -------GYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEG 162
Y K EAE IF +P R+ W +I+GYVQ G L+ F +MR
Sbjct: 388 VGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN 447
Query: 163 FEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNAR 222
D+ T +VL A A L GKQ+H I N F SGLVDMYAKCG + +A
Sbjct: 448 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 507
Query: 223 LVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGG 282
VFE RN WNA+IS A NG + F +M ++PD+++ L VL+AC+H G
Sbjct: 508 QVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCG 567
Query: 283 LLSEALEVISKMEA-YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAM 341
+ + E M Y I KHY CM+DLLGR GR EA L+ MP EP+E + ++
Sbjct: 568 FVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSV 627
Query: 342 LGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIM 396
L ACR H + +AE+ + + + R + V +SNIYAA+ +WEK ++ M
Sbjct: 628 LNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAM 682
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 165/341 (48%), Gaps = 12/341 (3%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
MP +N V+ N MISG+++ GD+ SA +F+ MP +T VTW+ ++G +ARN A +LF
Sbjct: 74 MPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLF 133
Query: 61 DE----APHELKGVVTWTVMVDGYARKGEMEAAREV----FELMPERNCFVWSS--MVSG 110
+ + L VT+T ++ G A +V +L + N F+ S ++
Sbjct: 134 RQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKS 193
Query: 111 YCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
YC+ + A +F IP + +NT+I GY ++G ++ F +MR G +P +FT
Sbjct: 194 YCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTF 253
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ 230
VL A L G+Q+H + + + V + ++D Y+K ++ R++F+ +
Sbjct: 254 SGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPE 313
Query: 231 RNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEV 290
+ +N +IS ++ + L FF M+ + F T+LS A+ L ++
Sbjct: 314 LDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQL 373
Query: 291 ISKMEAYAIEMGIKHYG-CMVDLLGRAGRLKEAYDLIKRMP 330
+ A I H G +VD+ + +EA + K +P
Sbjct: 374 HCQ-ALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP 413
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 123/261 (47%), Gaps = 8/261 (3%)
Query: 76 MVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIW 135
+V+ R+G++ AAR+V++ MP +N ++M+SG+ K G V+ A +F +P R++ W
Sbjct: 54 IVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTW 113
Query: 136 NTMIAGYVQNGFGERALQAFEEM--RAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMI 193
++ Y +N + A + F +M + PD T ++L C +A Q+H
Sbjct: 114 TILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFA 173
Query: 194 EHKRLTVNPF--VLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCRE 251
NPF V + L+ Y + L A ++FE +++ +N +I+G+ +G E
Sbjct: 174 VKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTE 233
Query: 252 VLEFFGRMENLNIRPDAITFLTVLSACA--HGGLLSEALEVISKMEAYAIEMGIKHYGCM 309
+ F +M +P TF VL A H L + L +S ++ + + + +
Sbjct: 234 SIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQ--I 291
Query: 310 VDLLGRAGRLKEAYDLIKRMP 330
+D + R+ E L MP
Sbjct: 292 LDFYSKHDRVLETRMLFDEMP 312
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 26/183 (14%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEM------PGKT---GVTWSQMIGGFARNG 51
MP+RN V+WNA+IS + NGD E+A F +M P GV + GF G
Sbjct: 513 MPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQG 572
Query: 52 DTATARRLFDEAPHELKGVVT----WTVMVDGYARKGEMEAAREVFELMP-ERNCFVWSS 106
+ +A + G+ + M+D R G A ++ + MP E + +WSS
Sbjct: 573 TE------YFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSS 626
Query: 107 MVSGYC---KKGSVAE--AETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAE 161
+++ C K S+AE AE +F +R + +M Y G E+ + MR
Sbjct: 627 VLNA-CRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRER 685
Query: 162 GFE 164
G +
Sbjct: 686 GIK 688
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 66/144 (45%), Gaps = 10/144 (6%)
Query: 162 GFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA 221
GF+ D ++ + G + A ++++ + HK ++SG + K GD+ +A
Sbjct: 43 GFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISG----HVKTGDVSSA 98
Query: 222 RLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRM--ENLNIRPDAITFLTVLSACA 279
R +F+ R + W ++ +A N E + F +M + PD +TF T+L C
Sbjct: 99 RDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCN 158
Query: 280 HGGLLSEALEVISKMEAYAIEMGI 303
+ + ++ A+A+++G
Sbjct: 159 D----AVPQNAVGQVHAFAVKLGF 178
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 221 bits (563), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 136/444 (30%), Positives = 219/444 (49%), Gaps = 41/444 (9%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTG-VTWSQMIGGFARNGDTATA----R 57
E++ +W M++GY++NG + + E M V ++ MI G+ G A R
Sbjct: 216 EKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVR 275
Query: 58 RL------FDE--APHELKGVVTWTVM------------------------VDGYARKGE 85
R+ DE P ++ T ++ V Y + G+
Sbjct: 276 RMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGK 335
Query: 86 MEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQN 145
+ AR +FE MP ++ W++++SGY G + EA+ IF + +++ W MI+G +N
Sbjct: 336 FDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAEN 395
Query: 146 GFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVL 205
GFGE L+ F M+ EGFEP ++ + +CA LG G+Q H + +
Sbjct: 396 GFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAG 455
Query: 206 SGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIR 265
+ L+ MYAKCG + AR VF + WNA+I+ +G E ++ + M IR
Sbjct: 456 NALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIR 515
Query: 266 PDAITFLTVLSACAHGGLLSEALEVISKMEA-YAIEMGIKHYGCMVDLLGRAGRLKEAYD 324
PD IT LTVL+AC+H GL+ + + ME Y I G HY ++DLL R+G+ +A
Sbjct: 516 PDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAES 575
Query: 325 LIKRMPMEPNETVLGAMLGACRTHSDMKMA-EQVIKLIGTNSITRADSHNVLLSNIYAAS 383
+I+ +P +P + A+L CR H +M++ KL G I D +LLSN++AA+
Sbjct: 576 VIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGL--IPEHDGTYMLLSNMHAAT 633
Query: 384 EKWEKAEKMRGIMVDGESEKIAGC 407
+WE+ ++R +M D +K C
Sbjct: 634 GQWEEVARVRKLMRDRGVKKEVAC 657
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 162/345 (46%), Gaps = 50/345 (14%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMP--GKTGVTWSQMIGGFARNGDTATARR 58
+ E + + M+SGY +GD+ A VFE+ P + V ++ MI GF+ N D +A
Sbjct: 75 ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 59 LFDEAPHE---------------------------------LK---GVVTW--TVMVDGY 80
LF + HE LK G +T +V Y
Sbjct: 135 LFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVY 194
Query: 81 ARKGE----MEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIF-GRIPVRSLEIW 135
++ + +AR+VF+ + E++ W++M++GY K G E + G L +
Sbjct: 195 SKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAY 254
Query: 136 NTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEH 195
N MI+GYV GF + AL+ M + G E DEFT SV+ ACA GLL GKQ+H +
Sbjct: 255 NAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVL- 313
Query: 196 KRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEF 255
+R + + LV +Y KCG AR +FE +++ WNA++SG+ +G E
Sbjct: 314 RREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLI 373
Query: 256 FGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIE 300
F M+ NI ++++ ++S A G E L++ S M+ E
Sbjct: 374 FKEMKEKNI----LSWMIMISGLAENGFGEEGLKLFSCMKREGFE 414
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNG--------D 52
MP +++V+WNA++SGY+ +G + A L+F+EM K ++W MI G A NG
Sbjct: 346 MPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLF 405
Query: 53 TATARRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYC 112
+ R F+ + G + ++ Y + A ++ ++ + + +++++ Y
Sbjct: 406 SCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHA--QLLKIGFDSSLSAGNALITMYA 463
Query: 113 KKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVS 172
K G V EA +F +P WN +IA Q+G G A+ +EEM +G PD T+++
Sbjct: 464 KCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLT 523
Query: 173 VLSACAQLGLLDAGKQIHHMIEH-KRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQR 231
VL+AC+ GL+D G++ +E R+ + L+D+ + G +A V E +
Sbjct: 524 VLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFK 583
Query: 232 NIC-CWNAMISGFAING 247
W A++SG ++G
Sbjct: 584 PTAEIWEALLSGCRVHG 600
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 128/257 (49%), Gaps = 20/257 (7%)
Query: 76 MVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPV--RSLE 133
++D Y + E+ AR++F+ + E + ++MVSGYC G + A +F + PV R
Sbjct: 55 LIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTV 114
Query: 134 IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQ---IH 190
++N MI G+ N G A+ F +M+ EGF+PD FT SVL+ A + D KQ H
Sbjct: 115 MYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVA--DDEKQCVQFH 172
Query: 191 HMIEHKRLTVNPFVLSGLVDMYAKCGD----LVNARLVFEGFTQRNICCWNAMISGFAIN 246
V + LV +Y+KC L +AR VF+ +++ W M++G+ N
Sbjct: 173 AAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKN 232
Query: 247 GKC---REVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGI 303
G E+LE G +N+ + + + ++S + G EALE++ +M + IE+
Sbjct: 233 GYFDLGEELLE--GMDDNMKL----VAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDE 286
Query: 304 KHYGCMVDLLGRAGRLK 320
Y ++ AG L+
Sbjct: 287 FTYPSVIRACATAGLLQ 303
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 221 bits (562), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 130/438 (29%), Positives = 220/438 (50%), Gaps = 42/438 (9%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTW----------------------------- 40
N +++ Y + G A VF+EMP + + W
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 101
Query: 41 -------SQMIGGFARNGDTATARRL---FDEAPHELKGVVTWTVMVDGYARKGEMEAAR 90
S ++ A G R++ F + + VV + +VD YA+ G + +A+
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVK-SSLVDMYAKCGLLNSAK 160
Query: 91 EVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGER 150
VF+ + +N W++MVSGY K G EA +F +PV++L W +I+G+VQ+G G
Sbjct: 161 AVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLE 220
Query: 151 ALQAFEEMRAEGFEP-DEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLV 209
A F EMR E + D + S++ ACA L AG+Q+H ++ F+ + L+
Sbjct: 221 AFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALI 280
Query: 210 DMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAI 269
DMYAKC D++ A+ +F R++ W ++I G A +G+ + L + M + ++P+ +
Sbjct: 281 DMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEV 340
Query: 270 TFLTVLSACAHGGLLSEALEVISKM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKR 328
TF+ ++ AC+H G + + E+ M + Y I ++HY C++DLLGR+G L EA +LI
Sbjct: 341 TFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHT 400
Query: 329 MPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEK 388
MP P+E A+L AC+ +M ++ + ++ + S +LLSNIYA++ W K
Sbjct: 401 MPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGK 460
Query: 389 AEKMRGIMVDGESEKIAG 406
+ R + + E K G
Sbjct: 461 VSEARRKLGEMEVRKDPG 478
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 113/259 (43%), Gaps = 42/259 (16%)
Query: 48 ARNGDTATARRLFDEAPHELK-GVVTW----TVMVDGYARKGEMEAAREVFELMPERNCF 102
ARN TA+ L H +K G+V +V+ Y + G A +VF+ MP R+
Sbjct: 14 ARNRTLTTAKALH---AHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHI 70
Query: 103 VWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEG 162
W+S+++ + N G+ + G
Sbjct: 71 AWASVLTALNQ------------------------------ANLSGKTLSVFSSVGSSSG 100
Query: 163 FEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNAR 222
PD+F +++ ACA LG +D G+Q+H + V S LVDMYAKCG L +A+
Sbjct: 101 LRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAK 160
Query: 223 LVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGG 282
VF+ +N W AM+SG+A +G+ E LE F + N+ ++ ++S G
Sbjct: 161 AVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNL----YSWTALISGFVQSG 216
Query: 283 LLSEALEVISKMEAYAIEM 301
EA V ++M +++
Sbjct: 217 KGLEAFSVFTEMRRERVDI 235
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 130/406 (32%), Positives = 210/406 (51%), Gaps = 18/406 (4%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
E + N +I Y G + VF+ M + ++W+ +I + N A LF E
Sbjct: 279 ESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQE 338
Query: 63 --APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCF-----VWSSMVSGYCKKG 115
+T + ++ G++ A R V + F + +++V Y K G
Sbjct: 339 MRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLG 398
Query: 116 SVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEG-FEPDEFTVVSVL 174
V A +F +P + WNT+I+GY QNGF A++ + M EG ++ T VSVL
Sbjct: 399 LVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVL 458
Query: 175 SACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNIC 234
AC+Q G L G ++H + L ++ FV++ L DMY KCG L +A +F + N
Sbjct: 459 PACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSV 518
Query: 235 CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM 294
WN +I+ +G + + F M + ++PD ITF+T+LSAC+H GL+ E M
Sbjct: 519 PWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMM 578
Query: 295 EA-YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKM 353
+ Y I +KHYGCMVD+ GRAG+L+ A IK M ++P+ ++ GA+L ACR H ++ +
Sbjct: 579 QTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDL 638
Query: 354 AEQVIKLIGTNSITRADS----HNVLLSNIYAASEKWEKAEKMRGI 395
+ I + + + ++VLLSN+YA++ KWE +++R I
Sbjct: 639 GK-----IASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSI 679
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 162/332 (48%), Gaps = 31/332 (9%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
MP R++ +WNAMISGY ++G+ + A + + VT ++ GD F
Sbjct: 211 MPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGD-------F 263
Query: 61 DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEA 120
+ V + Y+ K +E+ EL FV + ++ Y + G + +
Sbjct: 264 NRG-----------VTIHSYSIKHGLES-----EL------FVSNKLIDLYAEFGRLRDC 301
Query: 121 ETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQL 180
+ +F R+ VR L WN++I Y N RA+ F+EMR +PD T++S+ S +QL
Sbjct: 302 QKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQL 361
Query: 181 GLLDAGKQIHHMIEHKRLTVNPFVL-SGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAM 239
G + A + + K + + + +V MYAK G + +AR VF ++ WN +
Sbjct: 362 GDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTI 421
Query: 240 ISGFAINGKCREVLEFFGRMENL-NIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYA 298
ISG+A NG E +E + ME I + T+++VL AC+ G L + +++ ++
Sbjct: 422 ISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNG 481
Query: 299 IEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMP 330
+ + + + D+ G+ GRL++A L ++P
Sbjct: 482 LYLDVFVVTSLADMYGKCGRLEDALSLFYQIP 513
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 136/292 (46%), Gaps = 26/292 (8%)
Query: 4 RNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFD-- 61
+NV +++ Y G++ A F+ + + W+ MI G+ R G+++ R F
Sbjct: 84 QNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF 143
Query: 62 -----------EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSG 110
P LK T ++DG ++ F M + +V +S++
Sbjct: 144 MLSSGLTPDYRTFPSVLKACRT---VIDG----NKIHCLALKFGFM--WDVYVAASLIHL 194
Query: 111 YCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
Y + +V A +F +PVR + WN MI+GY Q+G + AL +RA D TV
Sbjct: 195 YSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTV 250
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ 230
VS+LSAC + G + G IH L FV + L+D+YA+ G L + + VF+
Sbjct: 251 VSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYV 310
Query: 231 RNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGG 282
R++ WN++I + +N + + F M I+PD +T +++ S + G
Sbjct: 311 RDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 183 LDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISG 242
L + K +H + + N + + LV++Y G++ AR F+ R++ WN MISG
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 243 FAINGKCREVLEFFGR-MENLNIRPDAITFLTVLSAC 278
+ G EV+ F M + + PD TF +VL AC
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC 163
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/293 (39%), Positives = 183/293 (62%), Gaps = 8/293 (2%)
Query: 107 MVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRA-EGFEP 165
++ K G A+ + +++ WN MI GYV+N E AL+A + M + +P
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 166 DEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVF 225
++F+ S L+ACA+LG L K +H ++ + +N + S LVD+YAKCGD+ +R VF
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 226 EGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLS 285
+ ++ WNAMI+GFA +G E + F ME ++ PD+ITFL +L+ C+H GLL
Sbjct: 224 YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLE 283
Query: 286 EALEVISKM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGA 344
E E M ++I+ ++HYG MVDLLGRAGR+KEAY+LI+ MP+EP+ + ++L +
Sbjct: 284 EGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSS 343
Query: 345 CRTHSDMKMAEQVIKLIGTNSITRADSHN-VLLSNIYAASEKWEKAEKMRGIM 396
RT+ + ++ E I ++++A S + VLLSNIY++++KWE A+K+R +M
Sbjct: 344 SRTYKNPELGE-----IAIQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELM 391
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 120/254 (47%), Gaps = 25/254 (9%)
Query: 6 VVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPH 65
V N +I M+ G+ A V + +TW+ MIGG+ RN ++EA
Sbjct: 98 VCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQ-------YEEALK 150
Query: 66 ELKGVVTWTVM----------VDGYARKGEMEAAREVFELMP----ERNCFVWSSMVSGY 111
LK ++++T + + AR G++ A+ V LM E N + S++V Y
Sbjct: 151 ALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVY 210
Query: 112 CKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVV 171
K G + + +F + + IWN MI G+ +G A++ F EM AE PD T +
Sbjct: 211 AKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFL 270
Query: 172 SVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFV--LSGLVDMYAKCGDLVNARLVFEGF- 228
+L+ C+ GLL+ GK+ ++ +R ++ P + +VD+ + G + A + E
Sbjct: 271 GLLTTCSHCGLLEEGKEYFGLMS-RRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMP 329
Query: 229 TQRNICCWNAMISG 242
+ ++ W +++S
Sbjct: 330 IEPDVVIWRSLLSS 343
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 11/172 (6%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFD- 61
E N + +A++ Y + GD+ ++ VF + W+ MI GFA +G A R+F
Sbjct: 197 ELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSE 256
Query: 62 -EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFV-----WSSMVSGYCKKG 115
EA H +T+ ++ + G +E +E F LM R + +MV + G
Sbjct: 257 MEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAG 316
Query: 116 SVAEAETIFGRIPVR-SLEIWNTMIAG---YVQNGFGERALQAFEEMRAEGF 163
V EA + +P+ + IW ++++ Y GE A+Q + ++ +
Sbjct: 317 RVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAKSGDY 368
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 140/424 (33%), Positives = 222/424 (52%), Gaps = 46/424 (10%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
M +R + WNAMI+GY +N + A L+F M + G N T
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGM---------EESAGLLANSTT------- 407
Query: 61 DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEA 120
+ GVV V ++RK + V + +R+ FV ++++ Y + G + A
Sbjct: 408 ------MAGVVPACVRSGAFSRKEAIHGF--VVKRGLDRDRFVQNTLMDMYSRLGKIDIA 459
Query: 121 ETIFGRIPVRSLEIWNTMIAGYVQNGFGERAL------QAFEEMRAEG-----FEPDEFT 169
IFG++ R L WNTMI GYV + E AL Q E ++G +P+ T
Sbjct: 460 MRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSIT 519
Query: 170 VVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT 229
++++L +CA L L GK+IH L + V S LVDMYAKCG L +R VF+
Sbjct: 520 LMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 579
Query: 230 QRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALE 289
Q+N+ WN +I + ++G +E ++ M ++P+ +TF++V +AC+H G++ E L
Sbjct: 580 QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLR 639
Query: 290 VISKMEA-YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNET-VLGAMLGACRT 347
+ M+ Y +E HY C+VDLLGRAGR+KEAY L+ MP + N+ ++LGA R
Sbjct: 640 IFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRI 699
Query: 348 HSDMKMAEQVIKLIGTNSITRAD----SHNVLLSNIYAASEKWEKAEKMRGIMVDGESEK 403
H+++++ E I ++ + + SH VLL+NIY+++ W+KA ++R M + K
Sbjct: 700 HNNLEIGE-----IAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRK 754
Query: 404 IAGC 407
GC
Sbjct: 755 EPGC 758
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 164/339 (48%), Gaps = 18/339 (5%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATA----RRLF 60
+V N +++ Y + GD + VF+ + + V+W+ +I A R +
Sbjct: 132 SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML 191
Query: 61 DE--APHELKGVVTWTVMVDGYARKGEMEAAR-EVFELMP-ERNCFVWSSMVSGYCKKGS 116
DE P V T + +G M + + L E N F+ +++V+ Y K G
Sbjct: 192 DENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGK 251
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+A ++ + G R L WNT+++ QN AL+ EM EG EPDEFT+ SVL A
Sbjct: 252 LASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPA 311
Query: 177 CAQLGLLDAGKQIH-HMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICC 235
C+ L +L GK++H + +++ L N FV S LVDMY C +++ R VF+G R I
Sbjct: 312 CSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGL 371
Query: 236 WNAMISGFAINGKCRE-VLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM 294
WNAMI+G++ N +E +L F G E+ + ++ T V+ AC G S +
Sbjct: 372 WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK----EAI 427
Query: 295 EAYAIEMGIKH----YGCMVDLLGRAGRLKEAYDLIKRM 329
+ ++ G+ ++D+ R G++ A + +M
Sbjct: 428 HGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 109/215 (50%), Gaps = 6/215 (2%)
Query: 116 SVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLS 175
+V+ A +IF RS E W ++ V++ A+ + +M G +PD + ++L
Sbjct: 47 AVSGAPSIFIS-QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLK 105
Query: 176 ACAQLGLLDAGKQIH-HMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNIC 234
A A L ++ GKQIH H+ + + V + LV++Y KCGD VF+ ++RN
Sbjct: 106 AVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQV 165
Query: 235 CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM 294
WN++IS K LE F M + N+ P + T ++V++AC++ + E L + ++
Sbjct: 166 SWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLP-MPEGLMMGKQV 224
Query: 295 EAYAIEMGIKH---YGCMVDLLGRAGRLKEAYDLI 326
AY + G + +V + G+ G+L + L+
Sbjct: 225 HAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLL 259
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 218 bits (555), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 222/474 (46%), Gaps = 84/474 (17%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMP--------------------------- 33
MP +N+++W ++SGY +N + A +F M
Sbjct: 310 MPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFG 369
Query: 34 ------------GKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKGVVTWTVMVDGYA 81
G + +I +A+ AR++FD VV + M++GY+
Sbjct: 370 TQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFD--IFAAADVVLFNAMIEGYS 427
Query: 82 RKG---EMEAAREVFELMPER--------------------------------------- 99
R G E+ A +F M R
Sbjct: 428 RLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNL 487
Query: 100 NCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMR 159
+ F S+++ Y + ++ +F + V+ L IWN+M AGYVQ E AL F E++
Sbjct: 488 DIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQ 547
Query: 160 AEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLV 219
PDEFT ++++A L + G++ H + + L NP++ + L+DMYAKCG
Sbjct: 548 LSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPE 607
Query: 220 NARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA 279
+A F+ R++ CWN++IS +A +G+ ++ L+ +M + I P+ ITF+ VLSAC+
Sbjct: 608 DAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACS 667
Query: 280 HGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLG 339
H GL+ + L+ M + IE +HY CMV LLGRAGRL +A +LI++MP +P V
Sbjct: 668 HAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWR 727
Query: 340 AMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMR 393
++L C ++++AE ++ S + +LSNIYA+ W +A+K+R
Sbjct: 728 SLLSGCAKAGNVELAEHAAEM-AILSDPKDSGSFTMLSNIYASKGMWTEAKKVR 780
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 168/346 (48%), Gaps = 23/346 (6%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
+R+V +I Y+++G+++ A LVF+ +P K+ VTW+ MI G + G + + +LF +
Sbjct: 180 DRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239
Query: 63 APHELKGVVTWTVMVDGYARKGEMEAAR-------------EVFELMPERNCFVWSSMVS 109
+ V+ DGY + A + E + + + ++
Sbjct: 240 LMED-------NVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLID 292
Query: 110 GYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFT 169
Y K G V A +F +P +++ W T+++GY QN + A++ F M G +PD +
Sbjct: 293 SYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYA 352
Query: 170 VVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT 229
S+L++CA L L G Q+H L + +V + L+DMYAKC L +AR VF+ F
Sbjct: 353 CSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFA 412
Query: 230 QRNICCWNAMISGFAING---KCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSE 286
++ +NAMI G++ G + E L F M IRP +TF+++L A A L
Sbjct: 413 AADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGL 472
Query: 287 ALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME 332
+ ++ M Y + + I ++D+ LK++ + M ++
Sbjct: 473 SKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK 518
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 163/326 (50%), Gaps = 17/326 (5%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE------- 62
N +I+ Y R G M A VFE+MP + V+WS M+ +G + +F E
Sbjct: 83 NILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKD 142
Query: 63 APHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEA 120
+P+E L + +DG R + + + +R+ +V + ++ Y K G++ A
Sbjct: 143 SPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYA 202
Query: 121 ETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQL 180
+F +P +S W TMI+G V+ G +LQ F ++ + PD + + +VLSAC+ L
Sbjct: 203 RLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSIL 262
Query: 181 GLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMI 240
L+ GKQIH I L ++ +++ L+D Y KCG ++ A +F G +NI W ++
Sbjct: 263 PFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLL 322
Query: 241 SGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIE 300
SG+ N +E +E F M ++PD ++L++CA AL +++ AY I+
Sbjct: 323 SGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCAS----LHALGFGTQVHAYTIK 378
Query: 301 --MGIKHY--GCMVDLLGRAGRLKEA 322
+G Y ++D+ + L +A
Sbjct: 379 ANLGNDSYVTNSLIDMYAKCDCLTDA 404
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 144/301 (47%), Gaps = 14/301 (4%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE-- 62
++ +A+I Y ++ + LVF+EM K V W+ M G+ + + A LF E
Sbjct: 488 DIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQ 547
Query: 63 APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKGSVA 118
E T+ MV ++ +E + +R N ++ ++++ Y K GS
Sbjct: 548 LSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPE 607
Query: 119 EAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACA 178
+A F R + WN++I+ Y +G G++ALQ E+M +EG EP+ T V VLSAC+
Sbjct: 608 DAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACS 667
Query: 179 QLGLLDAG-KQIHHMIEHKRLTVNPFV--LSGLVDMYAKCGDLVNARLVFEGF-TQRNIC 234
GL++ G KQ M+ R + P +V + + G L AR + E T+
Sbjct: 668 HAGLVEDGLKQFELML---RFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAI 724
Query: 235 CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM 294
W +++SG A G E+ E M L+ D+ +F + + A G+ +EA +V +M
Sbjct: 725 VWRSLLSGCAKAGNV-ELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERM 783
Query: 295 E 295
+
Sbjct: 784 K 784
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 117/238 (49%), Gaps = 7/238 (2%)
Query: 98 ERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEE 157
E + ++ + +++ Y + G + A +F ++P R+L W+TM++ +G E +L F E
Sbjct: 76 ELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLE 135
Query: 158 M-RAEGFEPDEFTVVSVLSACAQLGLLDAGK----QIHHMIEHKRLTVNPFVLSGLVDMY 212
R P+E+ + S + AC+ GL G+ Q+ + + +V + L+D Y
Sbjct: 136 FWRTRKDSPNEYILSSFIQACS--GLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFY 193
Query: 213 AKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFL 272
K G++ ARLVF+ +++ W MISG G+ L+ F ++ N+ PD
Sbjct: 194 LKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILS 253
Query: 273 TVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMP 330
TVLSAC+ L ++ + + Y +EM ++D + GR+ A+ L MP
Sbjct: 254 TVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP 311
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 218 bits (554), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 137/481 (28%), Positives = 228/481 (47%), Gaps = 90/481 (18%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMP----GKTGVTWSQMIGGFARNG----- 51
M +RN+ +WN+++S Y + G ++ A + +EM VTW+ ++ G+A G
Sbjct: 150 MKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDA 209
Query: 52 --------------DTATARRLFDEA--PHELK----------------GVVTWTVMVDG 79
T++ L P LK V T ++D
Sbjct: 210 IAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDM 269
Query: 80 YARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLE----IW 135
Y + G + AR VF++M +N W+S+VSG + +AE + R+ ++ W
Sbjct: 270 YIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITW 329
Query: 136 NTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQ---------------- 179
N++ +GY G E+AL +M+ +G P+ + ++ S C++
Sbjct: 330 NSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQE 389
Query: 180 -------------------LGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVN 220
L LL +GK++H K L + +V + LVDMY K GDL +
Sbjct: 390 EGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQS 449
Query: 221 ARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAH 280
A +F G +++ WN M+ G+A+ G+ E + F M + PDAITF +VLS C +
Sbjct: 450 AIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKN 509
Query: 281 GGLLSEALEVISKMEA-YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLG 339
GL+ E + M + Y I I+H CMVDLLGR+G L EA+D I+ M ++P+ T+ G
Sbjct: 510 SGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWG 569
Query: 340 AMLGACRTHSDMKMAEQVIKLIGTNSITRADSHN----VLLSNIYAASEKWEKAEKMRGI 395
A L +C+ H D+++AE I + + HN +++ N+Y+ +WE E++R +
Sbjct: 570 AFLSSCKIHRDLELAE-----IAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNL 624
Query: 396 M 396
M
Sbjct: 625 M 625
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 176/360 (48%), Gaps = 23/360 (6%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTW-SQMIG---------GFARN 50
MP+R+ + WN ++ +R+G+ E A +F EM + S M+ GFA
Sbjct: 49 MPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEG 108
Query: 51 GDT-ATARRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVS 109
RL E+ V ++ Y+R G++E +R+VF M +RN W+S++S
Sbjct: 109 RQIHGYVLRLGLES-----NVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILS 163
Query: 110 GYCKKGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEP 165
Y K G V +A + + + L+ WN++++GY G + A+ + M+ G +P
Sbjct: 164 SYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKP 223
Query: 166 DEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVF 225
++ S+L A A+ G L GK IH I +L + +V + L+DMY K G L AR+VF
Sbjct: 224 STSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVF 283
Query: 226 EGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLS 285
+ +NI WN+++SG + ++ RME I+PDAIT+ ++ S A G
Sbjct: 284 DMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPE 343
Query: 286 EALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME---PNETVLGAML 342
+AL+VI KM+ + + + + + G + A + +M E PN + +L
Sbjct: 344 KALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 102/205 (49%)
Query: 116 SVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLS 175
S+ A +F +P R WN ++ +++G E+A++ F EM+ G + + T+V +L
Sbjct: 38 SLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQ 97
Query: 176 ACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICC 235
C+ G+QIH + L N + + L+ MY++ G L +R VF RN+
Sbjct: 98 VCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSS 157
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKME 295
WN+++S + G + + ME ++PD +T+ ++LS A GL +A+ V+ +M+
Sbjct: 158 WNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ 217
Query: 296 AYAIEMGIKHYGCMVDLLGRAGRLK 320
++ ++ + G LK
Sbjct: 218 IAGLKPSTSSISSLLQAVAEPGHLK 242
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 218 bits (554), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 136/422 (32%), Positives = 210/422 (49%), Gaps = 21/422 (4%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
E N+ ++ YM G++ VFE++P V W +I GF N + A F E
Sbjct: 139 EVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFRE 198
Query: 63 APHELKGV-VTWTVMVDGYARKGEME---------------AAREVFELMPERNCFVWSS 106
+ GV T+MVD G + F+ N + +S
Sbjct: 199 M--QSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATS 256
Query: 107 MVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
++ Y K G + A +F +P R+L WN++I GY QNG E AL F +M G PD
Sbjct: 257 LIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPD 316
Query: 167 EFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFE 226
+ T +SV+ A G G+ IH + + ++ LV+MYAK GD +A+ FE
Sbjct: 317 KVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFE 376
Query: 227 GFTQRNICCWNAMISGFAINGKCREVLEFFGRM-ENLNIRPDAITFLTVLSACAHGGLLS 285
+++ W +I G A +G E L F RM E N PD IT+L VL AC+H GL+
Sbjct: 377 DLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVE 436
Query: 286 EALEVISKM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGA 344
E ++M + + +E ++HYGCMVD+L RAGR +EA L+K MP++PN + GA+L
Sbjct: 437 EGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNG 496
Query: 345 CRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKI 404
C H ++++ +++ ++ + + VLLSNIYA + +W + +R M +K+
Sbjct: 497 CDIHENLELTDRIRSMVAEPEELGSGIY-VLLSNIYAKAGRWADVKLIRESMKSKRVDKV 555
Query: 405 AG 406
G
Sbjct: 556 LG 557
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 134/282 (47%), Gaps = 36/282 (12%)
Query: 21 DMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEA------------PHELK 68
++ A VFE + + W+ MI G++ + + A + E P+ LK
Sbjct: 56 NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLK 115
Query: 69 GV-----VTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETI 123
+ + V G+ K E N +V + ++ Y G V +
Sbjct: 116 ACSGLRDIQFGSCVHGFVVKTGFEV-----------NMYVSTCLLHMYMCCGEVNYGLRV 164
Query: 124 FGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLL 183
F IP ++ W ++I+G+V N A++AF EM++ G + +E +V +L AC + +
Sbjct: 165 FEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDI 224
Query: 184 DAGKQIHHMIE--------HKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICC 235
GK H ++ ++ N + + L+DMYAKCGDL AR +F+G +R +
Sbjct: 225 VTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVS 284
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSA 277
WN++I+G++ NG E L F M +L I PD +TFL+V+ A
Sbjct: 285 WNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRA 326
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 108/226 (47%), Gaps = 14/226 (6%)
Query: 116 SVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLS 175
+++ A ++F I S+ IWN+MI GY + ++AL ++EM +G+ PD FT VL
Sbjct: 56 NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLK 115
Query: 176 ACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICC 235
AC+ L + G +H + VN +V + L+ MY CG++ VFE Q N+
Sbjct: 116 ACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVA 175
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA-----------HGGLL 284
W ++ISGF N + + +E F M++ ++ + + +L AC HG L
Sbjct: 176 WGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQ 235
Query: 285 SEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMP 330
+ + + + + ++D+ + G L+ A L MP
Sbjct: 236 GLGFDPYFQSK---VGFNVILATSLIDMYAKCGDLRTARYLFDGMP 278
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 131/283 (46%), Gaps = 54/283 (19%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEM------PGKT---GVTWSQMIGGFARNG 51
MPER +V+WN++I+GY +NGD E A +F +M P K V + MI G ++ G
Sbjct: 277 MPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLG 336
Query: 52 DTATARRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGY 111
+ A + +K +V+ YA+ G+ E+A++ FE + +++ W+ ++ G
Sbjct: 337 QSIHA---YVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIG- 392
Query: 112 CKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEG-FEPDEFTV 170
+G G AL F+ M+ +G PD T
Sbjct: 393 ------------------------------LASHGHGNEALSIFQRMQEKGNATPDGITY 422
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLT-VNPFV--LSGLVDMYAKCGDLVNA-RLVFE 226
+ VL AC+ +GL++ G++ + E + L + P V +VD+ ++ G A RLV
Sbjct: 423 LGVLYACSHIGLVEEGQR--YFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKT 480
Query: 227 GFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAI 269
+ N+ W A+++G I+ E LE R+ ++ P+ +
Sbjct: 481 MPVKPNVNIWGALLNGCDIH----ENLELTDRIRSMVAEPEEL 519
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 87/219 (39%), Gaps = 40/219 (18%)
Query: 170 VVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVN---ARLVFE 226
++S L C L L+ Q+H ++ + N LS L+D C + +N AR VFE
Sbjct: 9 ILSQLENCRSLVELN---QLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFE 65
Query: 227 GFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA------- 279
++ WN+MI G++ + + L F+ M PD TF VL AC+
Sbjct: 66 SIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQF 125
Query: 280 ----HGGLLSEALEVISKMEAYAIEM--------------------GIKHYGCMVDLLGR 315
HG ++ EV + + M + +G ++
Sbjct: 126 GSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVN 185
Query: 316 AGRLKEAYDLIKRMP---MEPNETVLGAMLGACRTHSDM 351
R +A + + M ++ NET++ +L AC D+
Sbjct: 186 NNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDI 224
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 147/462 (31%), Positives = 231/462 (50%), Gaps = 61/462 (13%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMP---------GKTGVTWSQMIGG----- 46
MPERN+V+W AMISG+ N A ++F EM G+T ++ + GG
Sbjct: 257 MPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEF 316
Query: 47 --------------------------------FARNGDTATARRLFDEAPHELKGVVTWT 74
+A +G A+A+ L +E+ +L+
Sbjct: 317 RRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNES-FDLQSC---N 372
Query: 75 VMVDGYARKGEMEAAREVFELMPERNCFV-WSSMVSGYCKKGSVAEAETIFGRIPVRSLE 133
++++ Y + G++E A +FE + + V W+SM+ GY + G V+ A +F ++ +
Sbjct: 373 IIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGV 432
Query: 134 IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMI 193
W MI+G VQN A +M G +P T +LS+ LD GK IH +I
Sbjct: 433 TWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVI 492
Query: 194 EHKRLTVNPFVL--SGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCRE 251
+P ++ + LV MYAKCG + +A +F Q++ WN+MI G + +G +
Sbjct: 493 AKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADK 552
Query: 252 VLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYAIEMGIKHYGCMV 310
L F M + +P+++TFL VLSAC+H GL++ LE+ M E Y+I+ GI HY M+
Sbjct: 553 ALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMI 612
Query: 311 DLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQV-----IKLIGTNS 365
DLLGRAG+LKEA + I +P P+ TV GA+LG C + K AE + ++L+ +
Sbjct: 613 DLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDP 672
Query: 366 ITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
+ A H V L N+YA + + ++MR M +K GC
Sbjct: 673 VN-APGH-VALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGC 712
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 160/331 (48%), Gaps = 44/331 (13%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
MP +NVV+W M++ +G E A +F+EMP + V+W+ ++ G RNGD A+++F
Sbjct: 134 MP-KNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVF 192
Query: 61 DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEA 120
D P + VV+W M+ GY ME A+ +F M E+N W+SMV GYC+ G V EA
Sbjct: 193 DAMPS--RDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREA 250
Query: 121 ETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMR--AEGFEPDEFTVVSVLSACA 178
+F +P R++ W MI+G+ N AL F EM+ + P+ T++S+ AC
Sbjct: 251 YRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACG 310
Query: 179 QLGL--LDAGKQIH--------HMIEHK-RLT---VNPFVLSGL---------------- 208
LG+ G+Q+H ++H RL V+ + SGL
Sbjct: 311 GLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQS 370
Query: 209 ----VDMYAKCGDLVNARLVFEGF-TQRNICCWNAMISGFAINGKCREVLEFFGRMENLN 263
++ Y K GDL A +FE + + W +MI G+ G F ++ +
Sbjct: 371 CNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHD-- 428
Query: 264 IRPDAITFLTVLSACAHGGLLSEALEVISKM 294
D +T+ ++S L +EA ++S M
Sbjct: 429 --KDGVTWTVMISGLVQNELFAEAASLLSDM 457
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 154/339 (45%), Gaps = 57/339 (16%)
Query: 1 MPER----NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATA 56
+P+R VV W +++S Y + G ++ A ++FE MP + VT + M+ G+ + A
Sbjct: 68 IPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEA 127
Query: 57 RRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGS 116
LF E P K VV+WTVM+ G E A E+F+ MPERN W+++V+G + G
Sbjct: 128 WTLFREMP---KNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGD 184
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+ +A+ +F +P R + WN MI GY++N E A F +M +
Sbjct: 185 MEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEK--------------- 229
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
N + +V Y + GD+ A +F +RNI W
Sbjct: 230 ------------------------NVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSW 265
Query: 237 NAMISGFAINGKCREVLEFFGRMEN--LNIRPDAITFLTVLSACAHGGLLSEALEVISKM 294
AMISGFA N RE L F M+ + P+ T +++ AC GGL E + ++
Sbjct: 266 TAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYAC--GGLGVEFRRLGEQL 323
Query: 295 EAYAIEMG---IKHYG----CMVDLLGRAGRLKEAYDLI 326
A I G + H G +V + +G + A L+
Sbjct: 324 HAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLL 362
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 138/415 (33%), Positives = 214/415 (51%), Gaps = 19/415 (4%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF---- 60
++ +A+I Y + + A +F + V ++ MI G+ NG + +F
Sbjct: 374 DIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLV 433
Query: 61 --DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVA 118
+P+E+ V V+ A K E + + + C + +++ Y K G +
Sbjct: 434 KVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMN 493
Query: 119 EAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACA 178
A IF R+ R + WN+MI Q+ A+ F +M G D ++ + LSACA
Sbjct: 494 LAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACA 553
Query: 179 QLGLLDAGKQIH-HMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWN 237
L GK IH MI+H L + + S L+DMYAKCG+L A VF+ ++NI WN
Sbjct: 554 NLPSESFGKAIHGFMIKHS-LASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWN 612
Query: 238 AMISGFAINGKCREVLEFFGRM-ENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-E 295
++I+ +GK ++ L F M E IRPD ITFL ++S+C H G + E + M E
Sbjct: 613 SIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTE 672
Query: 296 AYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAE 355
Y I+ +HY C+VDL GRAGRL EAY+ +K MP P+ V G +LGACR H ++++AE
Sbjct: 673 DYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAE 732
Query: 356 QVIKLIGTNSITRADSHN----VLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
+ ++ + D N VL+SN +A + +WE K+R +M + E +KI G
Sbjct: 733 -----VASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPG 782
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 167/349 (47%), Gaps = 7/349 (2%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE--APHEL 67
N+++S Y + G + AS +F M VTW+ MI G+ ++G + F E + L
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL 337
Query: 68 KGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKGSVAEAETI 123
+T++ ++ ++ +E +++ + + F+ S+++ Y K V+ A+ I
Sbjct: 338 PDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNI 397
Query: 124 FGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLL 183
F + + ++ MI+GY+ NG +L+ F + P+E T+VS+L L L
Sbjct: 398 FSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLAL 457
Query: 184 DAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGF 243
G+++H I K + ++DMYAKCG + A +FE ++R+I WN+MI+
Sbjct: 458 KLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRC 517
Query: 244 AINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGI 303
A + ++ F +M I D ++ LSACA+ S + M +++ +
Sbjct: 518 AQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDV 577
Query: 304 KHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMK 352
++D+ + G LK A ++ K M E N +++ AC H +K
Sbjct: 578 YSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNHGKLK 625
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 180/367 (49%), Gaps = 15/367 (4%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFD--EAPHEL 67
+++I Y+ G ++ S +F+ + K V W+ M+ G+A+ G + + F
Sbjct: 177 SSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQIS 236
Query: 68 KGVVTWTVMVDGYARKGEMEAAREVFELMP----ERNCFVWSSMVSGYCKKGSVAEAETI 123
VT+ ++ A K ++ ++ L+ + + +S++S Y K G +A +
Sbjct: 237 PNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKL 296
Query: 124 FGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLL 183
F + WN MI+GYVQ+G E +L F EM + G PD T S+L + ++ L
Sbjct: 297 FRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENL 356
Query: 184 DAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGF 243
+ KQIH I ++++ F+ S L+D Y KC + A+ +F ++ + AMISG+
Sbjct: 357 EYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGY 416
Query: 244 AINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGI 303
NG + LE F + + I P+ IT +++L G LL AL++ ++ + I+ G
Sbjct: 417 LHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVI--GILL--ALKLGRELHGFIIKKGF 472
Query: 304 K---HYGC-MVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIK 359
+ GC ++D+ + GR+ AY++ +R+ + + +M+ C + A + +
Sbjct: 473 DNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRCAQSDNPSAAIDIFR 531
Query: 360 LIGTNSI 366
+G + I
Sbjct: 532 QMGVSGI 538
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 136/299 (45%), Gaps = 29/299 (9%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
++ WN++IS ++RNG + A + +M F + D +T
Sbjct: 102 SIRPWNSIISSFVRNGLLNQALAFYFKMLC------------FGVSPDVST--------- 140
Query: 65 HELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIF 124
+V V + + KG + V L + N FV SS++ Y + G + +F
Sbjct: 141 --FPCLVKACVALKNF--KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLF 196
Query: 125 GRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLD 184
R+ + IWN M+ GY + G + ++ F MR + P+ T VLS CA L+D
Sbjct: 197 DRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLID 256
Query: 185 AGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFA 244
G Q+H ++ + + + L+ MY+KCG +A +F ++ + WN MISG+
Sbjct: 257 LGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYV 316
Query: 245 INGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGI 303
+G E L FF M + + PDAITF ++L + + E LE ++ Y + I
Sbjct: 317 QSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKF----ENLEYCKQIHCYIMRHSI 371
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 103/221 (46%), Gaps = 2/221 (0%)
Query: 111 YCKKGSVAEAETIFGRIPVR--SLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEF 168
Y GS ++ +F R+ +R S+ WN++I+ +V+NG +AL + +M G PD
Sbjct: 80 YAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVS 139
Query: 169 TVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF 228
T ++ AC L + + + N FV S L+ Y + G + +F+
Sbjct: 140 TFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRV 199
Query: 229 TQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEAL 288
Q++ WN M++G+A G V++ F M I P+A+TF VLS CA L+ +
Sbjct: 200 LQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGV 259
Query: 289 EVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM 329
++ + ++ ++ + + GR +A L + M
Sbjct: 260 QLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMM 300
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 107/265 (40%), Gaps = 36/265 (13%)
Query: 173 VLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQR- 231
+L AC+ LL GKQ+H + ++ + + ++ MYA CG + +F R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 232 -NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSAC------------ 278
+I WN++IS F NG + L F+ +M + PD TF ++ AC
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 279 --------------AHGGLLSEALE-----VISKMEAYAIEMGIKHYGCMVDLLGRAGRL 319
L+ LE V SK+ ++ + M++ + G L
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 320 K---EAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLL 376
+ + +++ + PN +L C + + + Q+ L+ + + S L
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 377 SNIYAASEKWEKAEKMRGIMVDGES 401
++Y+ +++ A K+ +M ++
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADT 305
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 138/454 (30%), Positives = 224/454 (49%), Gaps = 53/454 (11%)
Query: 1 MPERNVVTWNAMISG----YMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATA 56
MPE NVV+WN MI G Y + +E + + + VT ++G R+GD T
Sbjct: 310 MPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETG 369
Query: 57 RRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELM------PER----------- 99
RR+F P V W M+ GY+ E A F M P++
Sbjct: 370 RRIFSSIPQ--PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCA 427
Query: 100 ----------------------NCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEI--W 135
N + S +++ Y + + +E IF + L+I W
Sbjct: 428 RLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDC-INELDIACW 486
Query: 136 NTMIAGYVQNGFGERALQAFEEMRAEG-FEPDEFTVVSVLSACAQLGLLDAGKQIHHMIE 194
N+MI+G+ N +AL F M P+E + +VLS+C++L L G+Q H ++
Sbjct: 487 NSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVV 546
Query: 195 HKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLE 254
+ FV + L DMY KCG++ +AR F+ ++N WN MI G+ NG+ E +
Sbjct: 547 KSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVG 606
Query: 255 FFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKME-AYAIEMGIKHYGCMVDLL 313
+ +M + +PD ITF++VL+AC+H GL+ LE++S M+ + IE + HY C+VD L
Sbjct: 607 LYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCL 666
Query: 314 GRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVI-KLIGTNSITRADSH 372
GRAGRL++A L + P + + + +L +CR H D+ +A +V KL+ + ++ +
Sbjct: 667 GRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLD--PQSSAA 724
Query: 373 NVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
VLLSN Y++ +W+ + ++G+M K G
Sbjct: 725 YVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPG 758
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 173/360 (48%), Gaps = 52/360 (14%)
Query: 76 MVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIW 135
++D Y G+ + AR+VF+ M R+ + W++ ++ CK G + EA +F +P R + W
Sbjct: 47 LLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSW 106
Query: 136 NTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDA--GKQIHHMI 193
N MI+ V+ GF E+AL ++ M +GF P FT+ SVLSAC++ +LD G + H +
Sbjct: 107 NNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSK--VLDGVFGMRCHGVA 164
Query: 194 EHKRLTVNPFVLSGLVDMYAKCGDLVNARL-VFEGFTQRNICCWNAMISGFAINGKCREV 252
L N FV + L+ MYAKCG +V+ + VFE +Q N + A+I G A K E
Sbjct: 165 VKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEA 224
Query: 253 LEFFGRMENLNIRPDAITFLTVLSACA-----------HGGLLSEALEVI---------- 291
++ F M ++ D++ +LS A +G L + + +
Sbjct: 225 VQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDL 284
Query: 292 ----SKMEAYA---------------IEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMP-- 330
S +E YA E+ + + M+ G+ R ++ + + RM
Sbjct: 285 HLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDS 344
Query: 331 -MEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKA 389
+PNE ++LGAC D++ ++ I S++ + N +LS Y+ E +E+A
Sbjct: 345 GFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVS---AWNAMLSG-YSNYEHYEEA 400
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 189/423 (44%), Gaps = 51/423 (12%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
M R+V +WNA ++ + GD+ A VF+ MP + V+W+ MI R G F
Sbjct: 67 MSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKG--------F 118
Query: 61 DEAPHELKGVVTWTVMV-DGY-----ARKGEMEAAREVFELM-------------PERNC 101
+E K +V + MV DG+ + A +V + + ++N
Sbjct: 119 EE-----KALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNI 173
Query: 102 FVWSSMVSGYCKKGSVAE-AETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRA 160
FV ++++S Y K G + + +F + + + +I G + A+Q F M
Sbjct: 174 FVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCE 233
Query: 161 EGFEPDEFTVVSVLS------ACAQLGLL---DAGKQIHHMIEHKRLTVNPFVLSGLVDM 211
+G + D + ++LS C L + + GKQIH + + + + L+++
Sbjct: 234 KGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEI 293
Query: 212 YAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITF 271
YAK D+ A L+F + N+ WN MI GF + + +EF RM + +P+ +T
Sbjct: 294 YAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTC 353
Query: 272 LTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMP- 330
++VL AC G + + S + + + + M+ +EA ++M
Sbjct: 354 ISVLGACFRSGDVETGRRIFSSIP----QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQF 409
Query: 331 --MEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVL-LSNIYAASEKWE 387
++P++T L +L +C ++ +Q+ ++ I++ +SH V L +Y+ EK E
Sbjct: 410 QNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISK-NSHIVSGLIAVYSECEKME 468
Query: 388 KAE 390
+E
Sbjct: 469 ISE 471
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 100/248 (40%), Gaps = 46/248 (18%)
Query: 185 AGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARL--------------------- 223
+GK IH I + + ++ + L+D+Y +CGD AR
Sbjct: 24 SGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRC 83
Query: 224 ----------VFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLT 273
VF+G +R++ WN MIS G + L + RM P T +
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 274 VLSACAHGGLLSEALEVISKMEAY--AIEMGIKHY----GCMVDLLGRAGRLKEAYDLIK 327
VLSAC S+ L+ + M + A++ G+ ++ + + G + + +
Sbjct: 144 VLSAC------SKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVF 197
Query: 328 RMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWE 387
+PNE A++G + + A Q+ +L+ + + DS V LSNI + S E
Sbjct: 198 ESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGV-QVDS--VCLSNILSISAPRE 254
Query: 388 KAEKMRGI 395
+ + I
Sbjct: 255 GCDSLSEI 262
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 127/419 (30%), Positives = 229/419 (54%), Gaps = 20/419 (4%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPG-KTGVTWSQMIGGFARNGDTATARRLFD 61
+ + NAMIS Y G + A VF+ + G K ++W+ MI GF+++ +A LF
Sbjct: 235 QHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFI 294
Query: 62 EAPHEL--KGVVTWTVMVDGYARKGEMEAAREVFELMP----ERNCFVWSSMVSGYCK-- 113
+ + T+T ++ + + + + ++ E+ ++++S Y +
Sbjct: 295 QMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFP 354
Query: 114 KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSV 173
G++ +A ++F + + L WN++I G+ Q G E A++ F +R+ + D++ ++
Sbjct: 355 TGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSAL 414
Query: 174 LSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRN- 232
L +C+ L L G+QIH + N FV+S L+ MY+KCG + +AR F+ + ++
Sbjct: 415 LRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHS 474
Query: 233 ICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVIS 292
WNAMI G+A +G + L+ F +M N N++ D +TF +L+AC+H GL+ E LE+++
Sbjct: 475 TVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLN 534
Query: 293 KME-AYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDM 351
ME Y I+ ++HY VDLLGRAG + +A +LI+ MP+ P+ VL LG CR ++
Sbjct: 535 LMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEI 594
Query: 352 KMAEQVIKLIGTNSITRADSHN----VLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
+MA QV N + + + V LS++Y+ +KWE+ ++ +M + +K+ G
Sbjct: 595 EMATQV-----ANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPG 648
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 159/344 (46%), Gaps = 25/344 (7%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF---D 61
++ N ++ Y++ G + A+++F+EMP + V+W+ MI G+ G A LF
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93
Query: 62 EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELM----PERNCFVWSSMVSGYCKKGSV 117
+ ++ G +++ ++ G A + +V L+ E N +V SS+V Y K V
Sbjct: 94 RSGSDVDG-YSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERV 152
Query: 118 AEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERA--LQAFEEMRAEGFEPDEFTVVSVLS 175
+A F I + WN +IAG+VQ + A L EM+A D T +L+
Sbjct: 153 EDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKA-AVTMDAGTFAPLLT 211
Query: 176 ACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF-TQRNIC 234
+ KQ+H + L + + ++ YA CG + +A+ VF+G +++
Sbjct: 212 LLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLI 271
Query: 235 CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA-----------HGGL 283
WN+MI+GF+ + E F +M+ + D T+ +LSAC+ HG +
Sbjct: 272 SWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMV 331
Query: 284 LSEALEVISKMEAYAIEMGIKH-YGCMVDLLGRAGRLKEAYDLI 326
+ + LE ++ I M I+ G M D L LK + DLI
Sbjct: 332 IKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLK-SKDLI 374
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 129/408 (31%), Positives = 204/408 (50%), Gaps = 35/408 (8%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
E N WN M+ GY G M+ E + I D+A+A +
Sbjct: 395 EGNKEAWNTMLKGY---GKMKCHVKCIELF---------RKIQNLGIEIDSASATSVISS 442
Query: 63 APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAET 122
H G V + Y K ++ V +S++ Y K G + A
Sbjct: 443 CSH--IGAVLLGKSLHCYVVKTSLDLTISVV-----------NSLIDLYGKMGDLTVAWR 489
Query: 123 IFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGL 182
+F + WN MIA YV E+A+ F+ M +E F+P T+V++L AC G
Sbjct: 490 MFCEADTNVI-TWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGS 548
Query: 183 LDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISG 242
L+ G+ IH I +N + + L+DMYAKCG L +R +F+ Q++ CWN MISG
Sbjct: 549 LERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISG 608
Query: 243 FAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMG 302
+ ++G + F +ME +++P TFL +LSAC H GL+ + ++ KM Y ++
Sbjct: 609 YGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPN 668
Query: 303 IKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSD----MKMAEQVI 358
+KHY C+VDLL R+G L+EA + MP P+ + G +L +C TH + ++MAE+ +
Sbjct: 669 LKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAV 728
Query: 359 KLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
S + D + ++L+N+Y+A+ KWE+AE+ R +M + K AG
Sbjct: 729 A-----SDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAG 771
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 166/327 (50%), Gaps = 14/327 (4%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKG 69
++M S Y ++G+ A L F E+ + +W+ +I AR+GD + +F E + KG
Sbjct: 269 SSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQN--KG 326
Query: 70 VVTWTVMVDGYARK-GEMEAARE--VFELMPERNCF-----VWSSMVSGYCKKGSVAEAE 121
+ V++ + G+M + F R+CF V +S++S YCK ++ AE
Sbjct: 327 MHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAE 386
Query: 122 TIFGRIPVR-SLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQL 180
+F RI + E WNTM+ GY + + ++ F +++ G E D + SV+S+C+ +
Sbjct: 387 KLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHI 446
Query: 181 GLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA-RLVFEGFTQRNICCWNAM 239
G + GK +H + L + V++ L+D+Y K GDL A R+ E T N+ WNAM
Sbjct: 447 GAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADT--NVITWNAM 504
Query: 240 ISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAI 299
I+ + + + + F RM + N +P +IT +T+L AC + G L + +
Sbjct: 505 IASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEH 564
Query: 300 EMGIKHYGCMVDLLGRAGRLKEAYDLI 326
EM + ++D+ + G L+++ +L
Sbjct: 565 EMNLSLSAALIDMYAKCGHLEKSRELF 591
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 166/360 (46%), Gaps = 42/360 (11%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDT--------- 53
+RN + + Y + G ++ A LVF+EMP + V W+ +I G +NG++
Sbjct: 158 DRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCK 217
Query: 54 --ATARRLFDEAPHELK---------GVVTWTVMVDGYARKGEMEAAREVFELMPERNCF 102
+ + P L+ G + + G+A K + +++ F
Sbjct: 218 MHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSK-----------F 266
Query: 103 VWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEG 162
V SSM S Y K G+ +EA F + + W ++IA ++G E + F EM+ +G
Sbjct: 267 VQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKG 326
Query: 163 FEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNAR 222
PD + +++ ++ L+ GK H + +++ V + L+ MY K L A
Sbjct: 327 MHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAE 386
Query: 223 LVFEGFTQR-NICCWNAMISGFAINGKCR-EVLEFFGRMENLNIRPDAITFLTVLSACAH 280
+F ++ N WN M+ G+ KC + +E F +++NL I D+ + +V+S+C+H
Sbjct: 387 KLFCRISEEGNKEAWNTMLKGYG-KMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSH 445
Query: 281 GG--LLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVL 338
G LL ++L + ++++ I ++DL G+ G L A+ RM E + V+
Sbjct: 446 IGAVLLGKSLHCY--VVKTSLDLTISVVNSLIDLYGKMGDLTVAW----RMFCEADTNVI 499
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 107/232 (46%), Gaps = 12/232 (5%)
Query: 100 NCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMR 159
N FV S ++S Y G + +F + R + +WN++I + NG R+L F M
Sbjct: 58 NIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSML 117
Query: 160 AEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMI-EHKRLTVNPFVLSGLVDMYAKCGDL 218
G PD FT V+SACA+L G +H ++ +H N V + V Y+KCG L
Sbjct: 118 LSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFL 177
Query: 219 VNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNI---RPDAITFLTVL 275
+A LVF+ R++ W A+ISG NG+ L + +M + +P+ T
Sbjct: 178 QDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGF 237
Query: 276 SACAHGGLLSEALEVISKMEAYAIEMGIKH----YGCMVDLLGRAGRLKEAY 323
AC++ G L E + +A++ G+ M ++G EAY
Sbjct: 238 QACSNLGALKEG----RCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAY 285
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 119/280 (42%), Gaps = 18/280 (6%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF---- 60
N+ + +IS Y G +S VF + + W+ +I NGD A + F
Sbjct: 58 NIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSML 117
Query: 61 --DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMP-----ERNCFVWSSMVSGYCK 113
++P T ++V A V L+ +RN V +S V Y K
Sbjct: 118 LSGQSPDHF----TAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSK 173
Query: 114 KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFE---PDEFTV 170
G + +A +F +P R + W +I+G+VQNG E L +M + G + P+ T+
Sbjct: 174 CGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTL 233
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ 230
AC+ LG L G+ +H L + FV S + Y+K G+ A L F
Sbjct: 234 ECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGD 293
Query: 231 RNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAIT 270
++ W ++I+ A +G E + F M+N + PD +
Sbjct: 294 EDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVV 333
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 135/447 (30%), Positives = 209/447 (46%), Gaps = 44/447 (9%)
Query: 4 RNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE- 62
RN VTW +++ YM E+A VF EMP + W+ MI G A G + LF E
Sbjct: 136 RNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEM 195
Query: 63 ----------------------APHELKGVVTWTVMVDG---------------YARKGE 85
+ + + G + VM+ Y + G
Sbjct: 196 LESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGS 255
Query: 86 MEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQN 145
+ A E + W+S++ K G +A +F P +++ W TMI GY +N
Sbjct: 256 RDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRN 315
Query: 146 GFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVL 205
G GE+AL+ F EM G + D F +VL AC+ L LL GK IH + H +V
Sbjct: 316 GDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVG 375
Query: 206 SGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIR 265
+ LV++YAKCGD+ A F +++ WN M+ F ++G + L+ + M I+
Sbjct: 376 NALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIK 435
Query: 266 PDAITFLTVLSACAHGGLLSEALEVISKM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYD 324
PD +TF+ +L+ C+H GL+ E + M + Y I + + H CM+D+ GR G L EA D
Sbjct: 436 PDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKD 495
Query: 325 LIKRMPM----EPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIY 380
L N + +LGAC TH ++ +V K++ + S VLLSN+Y
Sbjct: 496 LATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSF-VLLSNLY 554
Query: 381 AASEKWEKAEKMRGIMVDGESEKIAGC 407
++ +W++ E +R MV+ +K GC
Sbjct: 555 CSTGRWKEGEDVRREMVERGMKKTPGC 581
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 43/213 (20%)
Query: 105 SSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFE 164
+S ++ K G +A A +F +P WNTM+ Y + G + A+ F ++R +
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 165 PDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLV 224
PD+++ ++LS CA LG + G++I ++ + V + L+DMY KC D ++A V
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 225 FEGFTQRNICC--------------------------------------WNAMISGFAIN 246
F R++CC WN MISG A
Sbjct: 128 F-----RDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHC 182
Query: 247 GKCREVLEFFGRMENLNIRPDAITFLTVLSACA 279
GK L F M +PD TF ++++AC+
Sbjct: 183 GKLESCLSLFKEMLESEFKPDCYTFSSLMNACS 215
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 147/366 (40%), Gaps = 48/366 (13%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEM----PGKTGVTWSQMIGGFARNGDTATA 56
MPE + V WN M++ Y R G + A +F ++ +++ ++ A G+
Sbjct: 30 MPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFG 89
Query: 57 RRLFDEAPHE--LKGVVTWTVMVDGYARKGEMEAAREVFELM--PERNCFVWSSMVSGYC 112
R++ + ++D Y + + +A +VF M RN W S++ Y
Sbjct: 90 RKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYM 149
Query: 113 KKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVS 172
A +F +P R WN MI+G+ G E L F+EM F+PD +T S
Sbjct: 150 NAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSS 209
Query: 173 VLSAC-AQLGLLDAGKQIHHM---------IEHKRLTVNPFVLSG--------------- 207
+++AC A + G+ +H + +E K ++ + G
Sbjct: 210 LMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVL 269
Query: 208 -------LVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRME 260
++D K G+ A VF ++NI W MI+G+ NG + L FF M
Sbjct: 270 TQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMM 329
Query: 261 NLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYG----CMVDLLGRA 316
+ D + VL AC+ LL + I G + Y +V+L +
Sbjct: 330 KSGVDSDHFAYGAVLHACSGLALLGHG----KMIHGCLIHCGFQGYAYVGNALVNLYAKC 385
Query: 317 GRLKEA 322
G +KEA
Sbjct: 386 GDIKEA 391
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 65/141 (46%), Gaps = 1/141 (0%)
Query: 205 LSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNI 264
L+ + AK G + +AR VF+G + + WN M++ ++ G +E + F ++ +
Sbjct: 7 LTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDA 66
Query: 265 RPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYD 324
+PD +F +LS CA G + ++ S + + ++D+ G+ A
Sbjct: 67 KPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 325 LIKRMPMEP-NETVLGAMLGA 344
+ + M + NE ++L A
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFA 147
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 215 bits (548), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 127/418 (30%), Positives = 213/418 (50%), Gaps = 17/418 (4%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPG-----KTGVTWSQMIGGFARNGDTAT 55
M ER+VV+WN+MISGY ++G E +++ M GVT + ++ D
Sbjct: 193 MSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIF 252
Query: 56 ARRLFDE--APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCK 113
+ + H + ++ YA+ G ++ AR +F+ M E++ + +++SGY
Sbjct: 253 GLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMA 312
Query: 114 KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSV 173
G V EA +F + L WN MI+G +QN E + +F EM G P+ T+ S+
Sbjct: 313 HGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSL 372
Query: 174 LSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNI 233
L + L GK+IH N +V + ++D YAK G L+ A+ VF+ R++
Sbjct: 373 LPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSL 432
Query: 234 CCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISK 293
W A+I+ +A++G F +M+ L +PD +T VLSA AH G A +
Sbjct: 433 IAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDS 492
Query: 294 M-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMK 352
M Y IE G++HY CMV +L RAG+L +A + I +MP++P V GA+L D++
Sbjct: 493 MLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLE 552
Query: 353 MA----EQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
+A +++ ++ N+ + +++N+Y + +WE+AE +R M +KI G
Sbjct: 553 IARFACDRLFEMEPENT-----GNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPG 605
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 125/280 (44%), Gaps = 13/280 (4%)
Query: 85 EMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQ 144
++ A VF + P+ F+ S ++S Y ++ +A +F I VR+ +N ++ Y
Sbjct: 43 QLHARIVVFSIKPDN--FLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTS 100
Query: 145 NGFGERALQAFEE------MRAEGFEPDEFT---VVSVLSACAQLGLLDAGKQIHHMIEH 195
A F ++ PD + V+ LS C L +Q+H +
Sbjct: 101 REMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIR 160
Query: 196 KRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEF 255
+ FV +G++ Y KC ++ +AR VF+ ++R++ WN+MISG++ +G + +
Sbjct: 161 GGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKM 220
Query: 256 FGRMENL-NIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLG 314
+ M + +P+ +T ++V AC L LEV KM I+M + ++
Sbjct: 221 YKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYA 280
Query: 315 RAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMA 354
+ G L A L M E + GA++ H +K A
Sbjct: 281 KCGSLDYARALFDEMS-EKDSVTYGAIISGYMAHGLVKEA 319
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 36/221 (16%)
Query: 44 IGGFARNGDTATARRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFV 103
+G AR R FD G++T+ Y + +E+AR+VF+ M ER+
Sbjct: 147 LGSLARQVHGFVIRGGFDSDVFVGNGMITY------YTKCDNIESARKVFDEMSERDVVS 200
Query: 104 WSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGF 163
W+SM+SGY + GS + + +++ M+A F
Sbjct: 201 WNSMISGYSQSGSFEDCK-----------KMYKAMLA-------------------CSDF 230
Query: 164 EPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARL 223
+P+ TV+SV AC Q L G ++H + + ++ + + ++ YAKCG L AR
Sbjct: 231 KPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARA 290
Query: 224 VFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNI 264
+F+ ++++ + A+ISG+ +G +E + F ME++ +
Sbjct: 291 LFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGL 331
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 215 bits (548), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 152/484 (31%), Positives = 223/484 (46%), Gaps = 96/484 (19%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMP--------------------------- 33
M R+V++WN MISGY RNG M A ++F+ M
Sbjct: 178 MKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMG 237
Query: 34 ------------GKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKGVVTWTVMVDGYA 81
G + ++ + + G AR +FD E + V+TWT M++GY
Sbjct: 238 RNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRM--ERRDVITWTCMINGYT 295
Query: 82 RKGEMEAAREVFELMP----ERNCFVWSSMVS----------GYCKKGSVAEAETIFGRI 127
G++E A E+ LM N +S+VS G C G A + ++ I
Sbjct: 296 EDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGW-AVRQQVYSDI 354
Query: 128 PVRSLEI--------------------------WNTMIAGYVQNGFGERALQAFEEMRAE 161
+ + I W+ +IAG VQN AL F+ MR E
Sbjct: 355 IIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRRE 414
Query: 162 GFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA 221
EP+ T+ S+L A A L L IH + + +GLV +Y+KCG L +A
Sbjct: 415 DVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESA 474
Query: 222 RLVFEGFTQR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSA 277
+F G ++ ++ W A+ISG+ ++G L+ F M + P+ ITF + L+A
Sbjct: 475 HKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNA 534
Query: 278 CAHGGLLSEALEVISKM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNET 336
C+H GL+ E L + M E Y HY C+VDLLGRAGRL EAY+LI +P EP T
Sbjct: 535 CSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTST 594
Query: 337 VLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHN----VLLSNIYAASEKWEKAEKM 392
V GA+L AC TH ++++ E + N + + N VLL+NIYAA +W+ EK+
Sbjct: 595 VWGALLAACVTHENVQLGE-----MAANKLFELEPENTGNYVLLANIYAALGRWKDMEKV 649
Query: 393 RGIM 396
R +M
Sbjct: 650 RSMM 653
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 199/443 (44%), Gaps = 65/443 (14%)
Query: 16 YMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKGVVTWTV 75
Y G + A +FEEMP + ++++ +I + R G A +F E GV
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSE--GV---KC 113
Query: 76 MVDGYARK------GEMEAAR-------EVFELMPERNCFVWSSMVSGYCKKGSVAEAET 122
+ DGY GE+++ + + R+ +V +++++ Y G V A
Sbjct: 114 VPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARD 173
Query: 123 IFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGL 182
+F + R + WNTMI+GY +NG+ AL F+ M E + D T+VS+L C L
Sbjct: 174 VFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKD 233
Query: 183 LDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISG 242
L+ G+ +H ++E KRL V + LV+MY KCG + AR VF+ +R++ W MI+G
Sbjct: 234 LEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMING 293
Query: 243 FAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA-----------HGGLLSEALEVI 291
+ +G LE M+ +RP+A+T +++S C HG + + +
Sbjct: 294 YTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSD 353
Query: 292 SKMEAYAIEM---------------GIKHY----------GCMVDLLGRAGRLKEAYDLI 326
+E I M G Y GC+ + L + +A L
Sbjct: 354 IIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNEL-----VSDALGLF 408
Query: 327 KRM---PMEPNETVLGAMLGACRTHSDMKMAEQV-IKLIGTNSITRADSHNVLLSNIYAA 382
KRM +EPN L ++L A +D++ A + L T ++ D+ L+ ++Y+
Sbjct: 409 KRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLV-HVYSK 467
Query: 383 SEKWEKAEKM-RGIMVDGESEKI 404
E A K+ GI +S+ +
Sbjct: 468 CGTLESAHKIFNGIQEKHKSKDV 490
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 172/364 (47%), Gaps = 9/364 (2%)
Query: 4 RNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEA 63
R+ NA+++ YM G +E A VF+ M + ++W+ MI G+ RNG A +FD
Sbjct: 150 RDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWM 209
Query: 64 PHELKGVVTWTV--MVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKGSV 117
+E + T+ M+ ++E R V +L+ E+ V +++V+ Y K G +
Sbjct: 210 VNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRM 269
Query: 118 AEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSAC 177
EA +F R+ R + W MI GY ++G E AL+ M+ EG P+ T+ S++S C
Sbjct: 270 DEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVC 329
Query: 178 AQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWN 237
++ GK +H +++ + + + L+ MYAKC + VF G ++ + W+
Sbjct: 330 GDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWS 389
Query: 238 AMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAY 297
A+I+G N + L F RM ++ P+ T ++L A A L +A+ + +
Sbjct: 390 AIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKT 449
Query: 298 AIEMGIKHYGCMVDLLGRAGRLKEAYDL---IKRMPMEPNETVLGAMLGACRTHSDMKMA 354
+ +V + + G L+ A+ + I+ + + GA++ H D A
Sbjct: 450 GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNA 509
Query: 355 EQVI 358
QV
Sbjct: 510 LQVF 513
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 2/229 (0%)
Query: 103 VWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEG 162
+ S++ Y G + A +F +P SL +N +I YV+ G A+ F M +EG
Sbjct: 51 ILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEG 110
Query: 163 FE--PDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVN 220
+ PD +T V A +L + G +H I + +V + L+ MY G +
Sbjct: 111 VKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEM 170
Query: 221 ARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAH 280
AR VF+ R++ WN MISG+ NG + L F M N ++ D T +++L C H
Sbjct: 171 ARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGH 230
Query: 281 GGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM 329
L V +E + I+ +V++ + GR+ EA + RM
Sbjct: 231 LKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRM 279
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 215 bits (547), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 123/343 (35%), Positives = 196/343 (57%), Gaps = 11/343 (3%)
Query: 74 TVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLE 133
T +++ Y+ G++ +A+ VF+ ++ W+S+V+ Y K G + +A +F +P R++
Sbjct: 101 TSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVI 160
Query: 134 IWNTMIAGYVQNGFGERALQAFEEMRA----EGF-EPDEFTVVSVLSACAQLGLLDAGKQ 188
W+ +I GYV G + AL F EM+ E F P+EFT+ +VLSAC +LG L+ GK
Sbjct: 161 SWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKW 220
Query: 189 IHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF-TQRNICCWNAMISGFAING 247
+H I+ + ++ + + L+DMYAKCG L A+ VF +++++ ++AMI A+ G
Sbjct: 221 VHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYG 280
Query: 248 KCREVLEFFGRMENL-NIRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYAIEMGIKH 305
E + F M NI P+++TF+ +L AC H GL++E M E + I I+H
Sbjct: 281 LTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQH 340
Query: 306 YGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIK-LIGTN 364
YGCMVDL GR+G +KEA I MPMEP+ + G++L R D+K E +K LI +
Sbjct: 341 YGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELD 400
Query: 365 SITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
+ VLLSN+YA + +W + + +R M K+ GC
Sbjct: 401 PMNSGAY--VLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGC 441
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 116/269 (43%), Gaps = 46/269 (17%)
Query: 117 VAEAETIFGRIPVRSLEI----WNTMIAGYVQNGFGER---ALQAFEEMRAEGFEPDEFT 169
+A A IF +R L++ WN +I V N + + + MR PD T
Sbjct: 8 IAYANPIFH---IRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHT 64
Query: 170 VVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDL----------- 218
+L + L G++ H I L +PFV + L++MY+ CGDL
Sbjct: 65 FPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSG 124
Query: 219 ----------VN----------ARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGR 258
VN AR +F+ +RN+ W+ +I+G+ + GK +E L+ F
Sbjct: 125 SKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFRE 184
Query: 259 ME-----NLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLL 313
M+ +RP+ T TVLSAC G L + V + ++ Y +E+ I ++D+
Sbjct: 185 MQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMY 244
Query: 314 GRAGRLKEAYDLIKRMPMEPNETVLGAML 342
+ G L+ A + + + + AM+
Sbjct: 245 AKCGSLERAKRVFNALGSKKDVKAYSAMI 273
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 119/254 (46%), Gaps = 15/254 (5%)
Query: 4 RNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE- 62
+++ WN++++ Y + G ++ A +F+EMP + ++WS +I G+ G A LF E
Sbjct: 126 KDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREM 185
Query: 63 ---APHEL---KGVVTWTVMVDGYARKGEMEAAREVFELMP----ERNCFVWSSMVSGYC 112
P+E T + ++ R G +E + V + E + + ++++ Y
Sbjct: 186 QLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYA 245
Query: 113 KKGSVAEAETIFGRI-PVRSLEIWNTMIAGYVQNGFGERALQAFEEM-RAEGFEPDEFTV 170
K GS+ A+ +F + + ++ ++ MI G + Q F EM ++ P+ T
Sbjct: 246 KCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTF 305
Query: 171 VSVLSACAQLGLLDAGKQ-IHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT 229
V +L AC GL++ GK MIE +T + +VD+Y + G + A
Sbjct: 306 VGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMP 365
Query: 230 -QRNICCWNAMISG 242
+ ++ W +++SG
Sbjct: 366 MEPDVLIWGSLLSG 379
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 124/403 (30%), Positives = 207/403 (51%), Gaps = 19/403 (4%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
+++ +S Y G+ E A +F +M + + A A R + +
Sbjct: 11 KLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSV 70
Query: 65 HE-------LKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSV 117
H L ++D Y + + AR++F+ +P+RN VW++M+S Y G V
Sbjct: 71 HAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKV 130
Query: 118 AEAETIFGRIPVRSLEI-WNTMIAGYVQNGFGE-RALQAFEEMRAEGFEPDEFTVVSVLS 175
EA ++ + V E +N +I G V G RA++ + +M F+P+ T+++++S
Sbjct: 131 KEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVS 190
Query: 176 ACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICC 235
AC+ +G K+IH + +P + SGLV+ Y +CG +V +LVF+ R++
Sbjct: 191 ACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVA 250
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKME 295
W+++IS +A++G L+ F ME + PD I FL VL AC+H GL EAL +M+
Sbjct: 251 WSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQ 310
Query: 296 A-YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMA 354
Y + HY C+VD+L R GR +EAY +I+ MP +P GA+LGACR + ++++A
Sbjct: 311 GDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELA 370
Query: 355 EQVIKLIGTNSITRADSHN----VLLSNIYAASEKWEKAEKMR 393
E I + + N VLL IY + + E+AE++R
Sbjct: 371 E-----IAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLR 408
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 129/289 (44%), Gaps = 36/289 (12%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEE---MPGKTGVTWSQMIGGFARNGDTATAR 57
+P+RN V WNAMIS Y G ++ A ++E MP ++ +++ +I G D +
Sbjct: 109 IPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNES--SFNAIIKGLVGTEDGSYRA 166
Query: 58 RLFDEAPHELK---GVVTWTVMVDGYARKGEMEAAREV----FELMPERNCFVWSSMVSG 110
F E + ++T +V + G +E+ F + E + + S +V
Sbjct: 167 IEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEA 226
Query: 111 YCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
Y + GS+ + +F + R + W+++I+ Y +G E AL+ F+EM PD+
Sbjct: 227 YGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAF 286
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKR------LTVNPFVLSGLVDMYAKCGDLVNARLV 224
++VL AC+ GL D ++ KR L + S LVD+ ++ G A V
Sbjct: 287 LNVLKACSHAGLADEA-----LVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKV 341
Query: 225 FEGFTQRNIC-CWNAMISGFAINGKCR-----EVLEFFGRMENLNIRPD 267
+ ++ W A++ G CR E+ E R E L + P+
Sbjct: 342 IQAMPEKPTAKTWGALL------GACRNYGEIELAEIAAR-ELLMVEPE 383
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 139/408 (34%), Positives = 223/408 (54%), Gaps = 20/408 (4%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRL---FDEA-PH 65
N ++S Y + G +E+ VF +M + V+W+ MI + N D A + L FD P+
Sbjct: 315 NILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI---SSNKDDAVSIFLNMRFDGVYPN 371
Query: 66 ELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCF----VWSSMVSGYCKKGSVAEAE 121
E VT+ +++ +++ ++ L + V +S ++ Y K ++ +A+
Sbjct: 372 E----VTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAK 427
Query: 122 TIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACA--Q 179
F I R + WN MI+G+ QNGF AL+ F AE P+E+T SVL+A A +
Sbjct: 428 KAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAE 486
Query: 180 LGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAM 239
+ G++ H + L P V S L+DMYAK G++ + VF +Q+N W ++
Sbjct: 487 DISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSI 546
Query: 240 ISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYA 298
IS ++ +G V+ F +M N+ PD +TFL+VL+AC G++ + E+ + M E Y
Sbjct: 547 ISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYN 606
Query: 299 IEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVI 358
+E +HY CMVD+LGRAGRLKEA +L+ +P P E++L +MLG+CR H ++KM +V
Sbjct: 607 LEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVA 666
Query: 359 KLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
+L + S+ V + NIYA E+W+KA ++R M K AG
Sbjct: 667 ELAMEMKPELSGSY-VQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAG 713
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 183/376 (48%), Gaps = 32/376 (8%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTA-TARRLFD 61
E ++V N+ I+ Y R+G A VF+EM K ++W+ ++ G ++ G A +F
Sbjct: 206 ESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFR 265
Query: 62 EAPHELKGV----VTWTVMVDGYARKGEMEAAREVFELMPERN----CFVWSSMVSGYCK 113
+ E GV V++T ++ + +++ AR++ L +R V + ++S Y K
Sbjct: 266 DMMRE--GVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSK 323
Query: 114 KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSV 173
G + +++F ++ R++ W TMI+ + A+ F MR +G P+E T V +
Sbjct: 324 CGVLEAVKSVFHQMSERNVVSWTTMISSNKDD-----AVSIFLNMRFDGVYPNEVTFVGL 378
Query: 174 LSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNI 233
++A + G +IH + P V + + +YAK L +A+ FE T R I
Sbjct: 379 INAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREI 438
Query: 234 CCWNAMISGFAINGKCREVLEFF--GRMENLNIRPDAITFLTVLSACAHGGLLSEALEVI 291
WNAMISGFA NG E L+ F E + P+ TF +VL+A A +S ++
Sbjct: 439 ISWNAMISGFAQNGFSHEALKMFLSAAAETM---PNEYTFGSVLNAIAFAEDIS--VKQG 493
Query: 292 SKMEAYAIEMGIKH----YGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRT 347
+ A+ +++G+ ++D+ + G + E+ + M + N+ V +++ A +
Sbjct: 494 QRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMS-QKNQFVWTSIISAYSS 552
Query: 348 HSD----MKMAEQVIK 359
H D M + ++IK
Sbjct: 553 HGDFETVMNLFHKMIK 568
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 184/434 (42%), Gaps = 60/434 (13%)
Query: 6 VVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNG-------DTATARR 58
V NA++ Y + G ++A +FE + V+W+ ++ GF N +A
Sbjct: 111 VCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQIALNFVVRMKSAGV 170
Query: 59 LFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVA 118
+FD + +++ V +G+ ++++ V + E + V +S ++ Y + GS
Sbjct: 171 VFDAFTYST--ALSFCVGSEGFLLGLQLQST--VVKTGLESDLVVGNSFITMYSRSGSFR 226
Query: 119 EAETIFGRIPVRSLEIWNTMIAGYVQNG-FGERALQAFEEMRAEGFEPDEFTVVSVLSAC 177
A +F + + + WN++++G Q G FG A+ F +M EG E D + SV++ C
Sbjct: 227 GARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTC 286
Query: 178 AQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWN 237
L +QIH + + V + L+ Y+KCG L + VF ++RN+ W
Sbjct: 287 CHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWT 346
Query: 238 AMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSA----------------CAHG 281
MIS + + F M + P+ +TF+ +++A C
Sbjct: 347 TMIS-----SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKT 401
Query: 282 GLLSEA------LEVISKMEAY-----AIE----MGIKHYGCMVDLLGRAGRLKEAYDLI 326
G +SE + + +K EA A E I + M+ + G EA +
Sbjct: 402 GFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF 461
Query: 327 KRMPME--PNETVLGAMLGACRTHSDMKMAE------QVIKLIGTNSITRADSHNVLLSN 378
E PNE G++L A D+ + + ++KL G NS S L +
Sbjct: 462 LSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKL-GLNSCPVVSS---ALLD 517
Query: 379 IYAASEKWEKAEKM 392
+YA +++EK+
Sbjct: 518 MYAKRGNIDESEKV 531
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 83/188 (44%), Gaps = 12/188 (6%)
Query: 150 RALQAFEEMRAEGF---EPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLS 206
RAL F+E G+ DE T+ L AC G L G QIH T V +
Sbjct: 58 RALSIFKENLQLGYFGRHMDEVTLCLALKACR--GDLKRGCQIHGFSTTSGFTSFVCVSN 115
Query: 207 GLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRP 266
++ MY K G NA +FE ++ WN ++SGF N + L F RM++ +
Sbjct: 116 AVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVF 172
Query: 267 DAITFLTVLSAC--AHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYD 324
DA T+ T LS C + G LL L++ S + +E + + + R+G + A
Sbjct: 173 DAFTYSTALSFCVGSEGFLL--GLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARR 230
Query: 325 LIKRMPME 332
+ M +
Sbjct: 231 VFDEMSFK 238
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 7/129 (5%)
Query: 7 VTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHE 66
V +A++ Y + G+++ + VF EM K W+ +I ++ +GD T LF + E
Sbjct: 510 VVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKE 569
Query: 67 --LKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFV-----WSSMVSGYCKKGSVAE 119
+VT+ ++ RKG ++ E+F +M E +S MV + G + E
Sbjct: 570 NVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKE 629
Query: 120 AETIFGRIP 128
AE + +P
Sbjct: 630 AEELMSEVP 638
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 143/453 (31%), Positives = 227/453 (50%), Gaps = 53/453 (11%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
M R++ +WNAMI+ +M+ G M+ A FE+M + VTW+ MI GF + G A +F
Sbjct: 207 MVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIF 266
Query: 61 DE-------APH--------------------------------ELKGVVTWTVMVDGYA 81
+ +P ++ G+V ++ Y+
Sbjct: 267 SKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVL-NALISMYS 325
Query: 82 RKGEMEAAREVFELMPERNCFV--WSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMI 139
R G +E AR + E ++ + +++++ GY K G + +A+ IF + R + W MI
Sbjct: 326 RCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMI 385
Query: 140 AGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLT 199
GY Q+G A+ F M G P+ +T+ ++LS + L L GKQIH
Sbjct: 386 VGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEI 445
Query: 200 VNPFVLSGLVDMYAKCGDLVNARLVFEGF-TQRNICCWNAMISGFAINGKCREVLEFFGR 258
+ V + L+ MYAK G++ +A F+ +R+ W +MI A +G E LE F
Sbjct: 446 YSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFET 505
Query: 259 MENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYAIEMGIKHYGCMVDLLGRAG 317
M +RPD IT++ V SAC H GL+++ + M + I + HY CMVDL GRAG
Sbjct: 506 MLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAG 565
Query: 318 RLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKM----AEQVIKLIGTNSITRADSHN 373
L+EA + I++MP+EP+ G++L ACR H ++ + AE+++ L NS +
Sbjct: 566 LLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYS---- 621
Query: 374 VLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
L+N+Y+A KWE+A K+R M DG +K G
Sbjct: 622 -ALANLYSACGKWEEAAKIRKSMKDGRVKKEQG 653
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 200/479 (41%), Gaps = 115/479 (24%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
MP R +WN ++S Y + GDM+S F+++P + V+W+ MI G+ G A R+
Sbjct: 75 MPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVM 134
Query: 61 DEAPHE------------------------------------LKGVVTWT-VMVDGYARK 83
+ E L+G V+ + +++ YA+
Sbjct: 135 GDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKC 194
Query: 84 GEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYV 143
G+ A+ VF+ M R+ W++M++ + + G + A F ++ R + WN+MI+G+
Sbjct: 195 GDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFN 254
Query: 144 QNGFGERALQAFEEM-RAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNP 202
Q G+ RAL F +M R PD FT+ SVLSACA L L GKQIH I ++
Sbjct: 255 QRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISG 314
Query: 203 FVLSGLVDMYAKCGDLVNAR----------LVFEGFT----------------------- 229
VL+ L+ MY++CG + AR L EGFT
Sbjct: 315 IVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLK 374
Query: 230 QRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVL-------------- 275
R++ W AMI G+ +G E + F M RP++ T +L
Sbjct: 375 DRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQ 434
Query: 276 ---SACAHGGLLS------------EALEVISKMEAYAI---EMGIKHYGCMVDLLGRAG 317
SA G + S +A + S A+ + E + M+ L + G
Sbjct: 435 IHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHG 494
Query: 318 RLKEAYDLIKRMPME---PNETVLGAMLGACRTHSDM--------KMAEQVIKLIGTNS 365
+EA +L + M ME P+ + AC TH+ + M + V K+I T S
Sbjct: 495 HAEEALELFETMLMEGLRPDHITYVGVFSAC-THAGLVNQGRQYFDMMKDVDKIIPTLS 552
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 138/285 (48%), Gaps = 32/285 (11%)
Query: 76 MVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIW 135
+++ Y++ G AR++F+ MP R F W++++S Y K+G + F ++P R W
Sbjct: 55 LMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSW 114
Query: 136 NTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEH 195
TMI GY G +A++ +M EG EP +FT+ +VL++ A ++ GK++H I
Sbjct: 115 TTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVK 174
Query: 196 KRLTVNPFVLSGLVDMYAKCGDLVNARLV------------------------------- 224
L N V + L++MYAKCGD + A+ V
Sbjct: 175 LGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQ 234
Query: 225 FEGFTQRNICCWNAMISGFAINGKCREVLEFFGRM-ENLNIRPDAITFLTVLSACAHGGL 283
FE +R+I WN+MISGF G L+ F +M + + PD T +VLSACA+
Sbjct: 235 FEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEK 294
Query: 284 LSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKR 328
L ++ S + ++ ++ + R G ++ A LI++
Sbjct: 295 LCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQ 339
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 127/394 (32%), Positives = 205/394 (52%), Gaps = 35/394 (8%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
+V WN+M+SG++ N + E+A + ++ S + G + RL +
Sbjct: 306 SVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQV- 364
Query: 65 HELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIF 124
H L V+V GY E + V S +V + G++ +A +F
Sbjct: 365 HSL-------VVVSGY-----------------ELDYIVGSILVDLHANVGNIQDAHKLF 400
Query: 125 GRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLD 184
R+P + + ++ +I G V++GF A F E+ G + D+F V ++L C+ L L
Sbjct: 401 HRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLG 460
Query: 185 AGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFA 244
GKQIH + K P + LVDMY KCG++ N ++F+G +R++ W +I GF
Sbjct: 461 WGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFG 520
Query: 245 INGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA-YAIEMGI 303
NG+ E +F +M N+ I P+ +TFL +LSAC H GLL EA + M++ Y +E +
Sbjct: 521 QNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYL 580
Query: 304 KHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKM----AEQVIK 359
+HY C+VDLLG+AG +EA +LI +MP+EP++T+ ++L AC TH + + AE+++K
Sbjct: 581 EHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLK 640
Query: 360 LIGTNSITRADSHNVLLSNIYAASEKWEKAEKMR 393
S LSN YA W++ K+R
Sbjct: 641 -----GFPDDPSVYTSLSNAYATLGMWDQLSKVR 669
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 166/340 (48%), Gaps = 11/340 (3%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEM-----PGKTGVTWSQMIGGFARNGDTAT 55
M ERN+VTW M+SGY +G A ++ M +S ++ GD
Sbjct: 66 MSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQL 125
Query: 56 ARRLFDEAPHE-LKG-VVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCK 113
+++ E L+G VV +VD Y + G + A F+ + + W++++SGYCK
Sbjct: 126 GILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCK 185
Query: 114 KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSV 173
G + EA T+F R+P ++ WN +I+G+V G RAL+ M+ EG D F +
Sbjct: 186 AGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKG-SPRALEFLVRMQREGLVLDGFALPCG 244
Query: 174 LSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEG---FTQ 230
L AC+ GLL GKQ+H + L +PF +S L+DMY+ CG L+ A VF
Sbjct: 245 LKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVN 304
Query: 231 RNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEV 290
++ WN+M+SGF IN + L ++ ++ D+ T L C + L L+V
Sbjct: 305 SSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQV 364
Query: 291 ISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMP 330
S + E+ +VDL G +++A+ L R+P
Sbjct: 365 HSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLP 404
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 118/271 (43%), Gaps = 33/271 (12%)
Query: 99 RNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEM 158
+N F+ ++++S Y +++A +F + R++ W TM++GY +G +A++ + M
Sbjct: 38 QNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRM 97
Query: 159 -RAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGD 217
+E +EF +VL AC +G + G ++ I + L + +++ +VDMY K G
Sbjct: 98 LDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGR 157
Query: 218 LVNAR-------------------------------LVFEGFTQRNICCWNAMISGFAIN 246
L+ A +F Q N+ WN +ISGF
Sbjct: 158 LIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDK 217
Query: 247 GKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHY 306
G R LEF RM+ + D L AC+ GGLL+ ++ + +E
Sbjct: 218 GSPR-ALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAI 276
Query: 307 GCMVDLLGRAGRLKEAYDLIKRMPMEPNETV 337
++D+ G L A D+ + + N +V
Sbjct: 277 SALIDMYSNCGSLIYAADVFHQEKLAVNSSV 307
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 82/175 (46%), Gaps = 3/175 (1%)
Query: 174 LSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNI 233
L C ++ G+ I + + ++ N F+ + ++ MY L +A VF+ ++RNI
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 234 CCWNAMISGFAINGKCREVLEFFGRM-ENLNIRPDAITFLTVLSACAHGGLLSEALEVIS 292
W M+SG+ +GK + +E + RM ++ + + VL AC G + + V
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 293 KMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAML-GACR 346
++ + + +VD+ + GRL EA K + + P+ T ++ G C+
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSWNTLISGYCK 185
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 21/196 (10%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
E VT A++ Y++ G++++ ++F+ M + V+W+ +I GF +NG A R F
Sbjct: 475 ESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYF-- 532
Query: 63 APHELKGV------VTWTVMVDGYARKGEMEAAREVFELMP-----ERNCFVWSSMVSGY 111
H++ + VT+ ++ G +E AR E M E + +V
Sbjct: 533 --HKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLL 590
Query: 112 CKKGSVAEAETIFGRIPVRSLE-IWNTMIA--GYVQNGFGERALQAFEEMRAEGFEPDEF 168
+ G EA + ++P+ + IW +++ G +N + E +GF D
Sbjct: 591 GQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNA---GLVTVIAEKLLKGFPDDPS 647
Query: 169 TVVSVLSACAQLGLLD 184
S+ +A A LG+ D
Sbjct: 648 VYTSLSNAYATLGMWD 663
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 140/417 (33%), Positives = 214/417 (51%), Gaps = 26/417 (6%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPG-KTGVTWSQMIGGFARNGDTATARRLFDEAPHELK 68
NA ++ Y + G + A VF M + V+W+ MI + ++ + A A L+ E K
Sbjct: 177 NAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMI--FK 234
Query: 69 G----VVTWTVMVDGYARKGEMEAAREVFELMPE----RNCFVWSSMVSGYCKKGS---V 117
G + T +++ + R+ + + +N V S ++ Y K G +
Sbjct: 235 GFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGM 294
Query: 118 AEAETIFGRIPVRSLEIWNTMIAGYVQNG-FGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
++E +F I L +WNTMI+GY N E A+++F +M+ G PD+ + V V SA
Sbjct: 295 YDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSA 354
Query: 177 CAQLGLLDAGKQIHHM-----IEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQR 231
C+ L KQIH + I R++VN + L+ +Y K G+L +AR VF+ +
Sbjct: 355 CSNLSSPSQCKQIHGLAIKSHIPSNRISVN----NALISLYYKSGNLQDARWVFDRMPEL 410
Query: 232 NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVI 291
N +N MI G+A +G E L + RM + I P+ ITF+ VLSACAH G + E E
Sbjct: 411 NAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYF 470
Query: 292 SKM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSD 350
+ M E + IE +HY CM+DLLGRAG+L+EA I MP +P A+LGACR H +
Sbjct: 471 NTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKN 530
Query: 351 MKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
M +AE+ + A + V+L+N+YA + KWE+ +R M K GC
Sbjct: 531 MALAERAANELMVMQPLAATPY-VMLANMYADARKWEEMASVRKSMRGKRIRKKPGC 586
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 182/363 (50%), Gaps = 25/363 (6%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
E NV ++N ++ Y ++ + A +F+E+P V+++ +I G+A +T A LF
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLF-- 128
Query: 63 APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCF-----------VWSSMVSGY 111
K + VDG+ G + A + +L+ + +CF V ++ V+ Y
Sbjct: 129 -----KRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYY 183
Query: 112 CKKGSVAEAETIF-GRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
K G + EA ++F G +R WN+MI Y Q+ G +AL ++EM +GF+ D FT+
Sbjct: 184 SKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTL 243
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCG---DLVNARLVFEG 227
SVL+A L L G+Q H + N V SGL+D Y+KCG + ++ VF+
Sbjct: 244 ASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQE 303
Query: 228 FTQRNICCWNAMISGFAINGK-CREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSE 286
++ WN MISG+++N + E ++ F +M+ + RPD +F+ V SAC++ S+
Sbjct: 304 ILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQ 363
Query: 287 ALEVIS-KMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGAC 345
++ ++++ I ++ L ++G L++A + RMP E N M+
Sbjct: 364 CKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP-ELNAVSFNCMIKGY 422
Query: 346 RTH 348
H
Sbjct: 423 AQH 425
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 3/203 (1%)
Query: 76 MVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIW 135
V+ Y++ G + AR F E N F ++ +V Y K + A +F IP +
Sbjct: 49 FVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSY 108
Query: 136 NTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEH 195
NT+I+GY A+ F+ MR GFE D FT+ +++AC +D KQ+H
Sbjct: 109 NTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCD--RVDLIKQLHCFSVS 166
Query: 196 KRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ-RNICCWNAMISGFAINGKCREVLE 254
V + V Y+K G L A VF G + R+ WN+MI + + + + L
Sbjct: 167 GGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALA 226
Query: 255 FFGRMENLNIRPDAITFLTVLSA 277
+ M + D T +VL+A
Sbjct: 227 LYKEMIFKGFKIDMFTLASVLNA 249
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 70/141 (49%), Gaps = 15/141 (10%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATA---- 56
+P + NA+IS Y ++G+++ A VF+ MP V+++ MI G+A++G A
Sbjct: 376 IPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLY 435
Query: 57 RRLFDE--APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER-----NCFVWSSMVS 109
+R+ D AP++ +T+ ++ A G+++ +E F M E +S M+
Sbjct: 436 QRMLDSGIAPNK----ITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMID 491
Query: 110 GYCKKGSVAEAETIFGRIPVR 130
+ G + EAE +P +
Sbjct: 492 LLGRAGKLEEAERFIDAMPYK 512
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 135/413 (32%), Positives = 214/413 (51%), Gaps = 23/413 (5%)
Query: 9 WNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLFDEAP 64
+N +I Y+ G+ +++ +F M +T+ +I + + L +A
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQA- 112
Query: 65 HELKGVVTW-----TVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAE 119
LK W T V Y G++E++R++F+ + +S++ + G +
Sbjct: 113 --LKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDY 170
Query: 120 AETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEM----RAEGFEPDEFTVVSVLS 175
A F R+PV + W T+I G+ + G +AL F EM RA P+E T VSVLS
Sbjct: 171 AFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAV-ITPNEATFVSVLS 229
Query: 176 ACAQL--GLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNI 233
+CA G + GKQIH + K + + + + L+DMY K GDL A +F+ + +
Sbjct: 230 SCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKV 289
Query: 234 CCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISK 293
C WNA+IS A NG+ ++ LE F M++ + P+ IT L +L+ACA L+ +++ S
Sbjct: 290 CAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSS 349
Query: 294 M-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMK 352
+ Y I +HYGC+VDL+GRAG L +A + I+ +P EP+ +VLGA+LGAC+ H + +
Sbjct: 350 ICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTE 409
Query: 353 MAEQVIK-LIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKI 404
+ V K LIG + V LS A W +AEKMR M++ KI
Sbjct: 410 LGNTVGKQLIGLQP--QHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKI 460
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 118/229 (51%), Gaps = 14/229 (6%)
Query: 6 VVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPH 65
VV N+++ RNG+M+ A F+ MP V+W+ +I GF++ G A A +F E
Sbjct: 152 VVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQ 211
Query: 66 ELKGVV-----TWTVMVDGYAR--KGEMEAAREVFELMPERNCFVWSSMVSG----YCKK 114
+ V+ T+ ++ A +G + +++ + + + +++ + Y K
Sbjct: 212 NERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKA 271
Query: 115 GSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVL 174
G + A TIF +I + + WN +I+ NG ++AL+ FE M++ P+ T++++L
Sbjct: 272 GDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAIL 331
Query: 175 SACAQLGLLDAGKQIHHMI--EHKRLTVNPFVLSGLVDMYAKCGDLVNA 221
+ACA+ L+D G Q+ I E+K + + +VD+ + G LV+A
Sbjct: 332 TACARSKLVDLGIQLFSSICSEYKIIPTSEH-YGCVVDLIGRAGLLVDA 379
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 115/284 (40%), Gaps = 74/284 (26%)
Query: 134 IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMI 193
++NT+I Y+ G + +L F M A +P+ T S++ A + G +H
Sbjct: 53 VYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQA 112
Query: 194 EHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEG-------------------------- 227
+ +PFV + V Y + GDL ++R +F+
Sbjct: 113 LKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 228 -FTQR----NICCWNAMISGFAINGKCREVLEFFGRM---ENLNIRPDAITFLTVLSACA 279
+ QR ++ W +I+GF+ G + L FG M E I P+ TF++VLS+CA
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 280 -------------HGGLLSEALEVISKM-----------EAYAIEMGIKHY--------- 306
HG ++S+ E+I +A +EM + +
Sbjct: 233 NFDQGGIRLGKQIHGYVMSK--EIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVC 290
Query: 307 --GCMVDLLGRAGRLKEA---YDLIKRMPMEPNETVLGAMLGAC 345
++ L GR K+A ++++K + PN L A+L AC
Sbjct: 291 AWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTAC 334
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/391 (32%), Positives = 208/391 (53%), Gaps = 13/391 (3%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKT-GVTWSQMIGGFARNGDTATARRLFD--EAPHE 66
NA+I Y G + A VF+EMP VT+S ++ G+ + A A LF
Sbjct: 164 NALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEV 223
Query: 67 LKGVVTWTVMVDGYARKGEMEAAREV----FELMPERNCFVWSSMVSGYCKKGSVAEAET 122
+ V T + + G++ A ++ + + + ++++ Y K G ++ A
Sbjct: 224 VVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARR 283
Query: 123 IFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGL 182
IF + + WN MI Y + G E + +M+ E +P+ T V +LS+CA
Sbjct: 284 IFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEA 343
Query: 183 LDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISG 242
G+ + ++E +R+ ++ + + LVDMYAK G L A +F +++ W AMISG
Sbjct: 344 AFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISG 403
Query: 243 FAINGKCREVLEFFGRM--ENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYAI 299
+ +G RE + F +M EN +RP+ ITFL VL+AC+HGGL+ E + +M EAY+
Sbjct: 404 YGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSF 463
Query: 300 EMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQV-I 358
++HYGC+VDLLGRAG+L+EAY+LI+ +P+ + T A+L ACR + + + E V +
Sbjct: 464 TPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMM 523
Query: 359 KLIGTNSITRADSHNVLLSNIYAASEKWEKA 389
+L AD+ +LL+ +A + EK+
Sbjct: 524 RLAEMGETHPADA--ILLAGTHAVAGNPEKS 552
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 135/316 (42%), Gaps = 35/316 (11%)
Query: 120 AETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQ 179
A +IF + +L ++NTMI GY + ERA F ++RA+G D F+ ++ L +C++
Sbjct: 78 ASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSR 137
Query: 180 LGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQR-NICCWNA 238
+ G+ +H + V + + L+ Y CG + +AR VF+ Q + ++
Sbjct: 138 ELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFST 197
Query: 239 MISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEA-------LEVI 291
+++G+ K L+ F M + + T L+ LSA + G LS A +++
Sbjct: 198 LMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIG 257
Query: 292 SKMEAYAIEMGIKHYG------------------------CMVDLLGRAGRLKEAYDLIK 327
++ + I I YG CM+D + G L+E L++
Sbjct: 258 LDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLR 317
Query: 328 RM---PMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASE 384
+M M+PN + +L +C + V L+ I L ++YA
Sbjct: 318 QMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVG 377
Query: 385 KWEKAEKMRGIMVDGE 400
EKA ++ M D +
Sbjct: 378 LLEKAVEIFNRMKDKD 393
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 104/252 (41%), Gaps = 37/252 (14%)
Query: 4 RNVVTWNAMISGYMRNGDMESASLVFEEMP----GKTGVTWSQMIGGFARNGDTATARRL 59
++VVTWN MI Y + G +E + +M T+ ++ A + R +
Sbjct: 291 KDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTV 350
Query: 60 FDEAPHELKGV--VTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSV 117
D E + + T +VD YA+ G +E A E+F M +++ W++M+SGY G
Sbjct: 351 ADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLA 410
Query: 118 AEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSAC 177
EA T+F ++ + ++ P+E T + VL+AC
Sbjct: 411 REAVTLFNKMEEENCKV-----------------------------RPNEITFLVVLNAC 441
Query: 178 AQLGLLDAG-KQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA-RLVFEGFTQRNICC 235
+ GL+ G + M+E T +VD+ + G L A L+ +
Sbjct: 442 SHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTA 501
Query: 236 WNAMISGFAING 247
W A+++ + G
Sbjct: 502 WRALLAACRVYG 513
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 128/410 (31%), Positives = 213/410 (51%), Gaps = 20/410 (4%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF-------DE 62
N +I Y + GDM +A VF M K V+W+ +I G+ ++GD A +LF ++
Sbjct: 346 NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405
Query: 63 APHELKGVVTWTVMVDGYARKGEMEAAREVFEL-MPERNCF---VWSSMVSGYCKKGSVA 118
A H +T+ +++ R +++ + + + C V ++++ Y K G V
Sbjct: 406 ADH-----ITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVG 460
Query: 119 EAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACA 178
++ IF + WNT+I+ V+ G LQ +MR PD T + L CA
Sbjct: 461 DSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCA 520
Query: 179 QLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNA 238
L GK+IH + + + L++MY+KCG L N+ VFE ++R++ W
Sbjct: 521 SLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTG 580
Query: 239 MISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA-Y 297
MI + + G+ + LE F ME I PD++ F+ ++ AC+H GL+ E L KM+ Y
Sbjct: 581 MIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHY 640
Query: 298 AIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQV 357
I+ I+HY C+VDLL R+ ++ +A + I+ MP++P+ ++ ++L ACRT DM+ AE+V
Sbjct: 641 KIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERV 700
Query: 358 I-KLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
++I N +++L SN YAA KW+K +R + D K G
Sbjct: 701 SRRIIELN--PDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPG 748
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 166/368 (45%), Gaps = 22/368 (5%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
E ++ NA++ Y R G + A VF+EMP + V+W+ +I G++ +G A ++
Sbjct: 138 ESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIY-- 195
Query: 63 APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWS-------------SMVS 109
HELK +W V D + + A + + + ++ +V+
Sbjct: 196 --HELKN--SWIV-PDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVA 250
Query: 110 GYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFT 169
Y K +A +F + VR +NTMI GY++ E +++ F E + F+PD T
Sbjct: 251 MYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLT 309
Query: 170 VVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT 229
V SVL AC L L K I++ + + V + L+D+YAKCGD++ AR VF
Sbjct: 310 VSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSME 369
Query: 230 QRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALE 289
++ WN++ISG+ +G E ++ F M + + D IT+L ++S L
Sbjct: 370 CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKG 429
Query: 290 VISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHS 349
+ S I + + ++D+ + G + ++ + M T ++ AC
Sbjct: 430 LHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVT-WNTVISACVRFG 488
Query: 350 DMKMAEQV 357
D QV
Sbjct: 489 DFATGLQV 496
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 159/343 (46%), Gaps = 30/343 (8%)
Query: 12 MISGYMRNGDMESASLVFEEM-PGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKGV 70
+I Y + S+ VF + P K W+ +I F++NG LF EA +
Sbjct: 45 LIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNG-------LFPEALEFYGKL 97
Query: 71 VTWTVMVDGYARKGEMEAA-------------REVFELMPERNCFVWSSMVSGYCKKGSV 117
V D Y ++A ++ ++ E + FV +++V Y + G +
Sbjct: 98 RESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLL 157
Query: 118 AEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSAC 177
A +F +PVR L WN++I+GY +G+ E AL+ + E++ PD FTV SVL A
Sbjct: 158 TRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAF 217
Query: 178 AQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWN 237
L ++ G+ +H + V +GLV MY K +AR VF+ R+ +N
Sbjct: 218 GNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYN 277
Query: 238 AMISGFAINGKCREVLEFFGRMENLN-IRPDAITFLTVLSACAHGGLLSEALEVISKM-- 294
MI G+ E + F +ENL+ +PD +T +VL AC H LS A + + M
Sbjct: 278 TMICGYLKLEMVEESVRMF--LENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLK 335
Query: 295 EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETV 337
+ +E +++ ++D+ + G + A D+ ME +TV
Sbjct: 336 AGFVLESTVRN--ILIDVYAKCGDMITARDVFN--SMECKDTV 374
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 106/196 (54%), Gaps = 7/196 (3%)
Query: 92 VFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRI-PVRSLEIWNTMIAGYVQNGFGER 150
V L + + F ++ Y A + ++F R+ P +++ +WN++I + +NG
Sbjct: 30 VISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPE 89
Query: 151 ALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDA--GKQIHHMIEHKRLTVNPFVLSGL 208
AL+ + ++R PD++T SV+ ACA GL DA G ++ I + FV + L
Sbjct: 90 ALEFYGKLRESKVSPDKYTFPSVIKACA--GLFDAEMGDLVYEQILDMGFESDLFVGNAL 147
Query: 209 VDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDA 268
VDMY++ G L AR VF+ R++ WN++ISG++ +G E LE + ++N I PD+
Sbjct: 148 VDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDS 207
Query: 269 ITFLTVLSACAHGGLL 284
T +VL A G LL
Sbjct: 208 FTVSSVLP--AFGNLL 221
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 175/395 (44%), Gaps = 14/395 (3%)
Query: 12 MISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELK-GV 70
+++ Y++ A VF+EM + V+++ MI G+ + + R+F E + K +
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDL 307
Query: 71 VTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSS----MVSGYCKKGSVAEAETIFGR 126
+T + ++ ++ A+ ++ M + + S+ ++ Y K G + A +F
Sbjct: 308 LTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNS 367
Query: 127 IPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAG 186
+ + WN++I+GY+Q+G A++ F+ M + D T + ++S +L L G
Sbjct: 368 MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG 427
Query: 187 KQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAIN 246
K +H + ++ V + L+DMYAKCG++ ++ +F + WN +IS
Sbjct: 428 KGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRF 487
Query: 247 GKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHY 306
G L+ +M + PD TFL L CA E+ + + E ++
Sbjct: 488 GDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIG 547
Query: 307 GCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLG---------ACRTHSDMKMAEQV 357
++++ + G L+ + + +RM T G + A T +DM+ + V
Sbjct: 548 NALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIV 607
Query: 358 IKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKM 392
+ +I A SH+ L+ A EK + K+
Sbjct: 608 PDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKI 642
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 111/287 (38%), Gaps = 60/287 (20%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
+ VTWN +IS +R GD FA T R + P
Sbjct: 473 DTVTWNTVISACVRFGD-------------------------FATGLQVTTQMRKSEVVP 507
Query: 65 HELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIF 124
+VT + A++ E + E + ++++ Y K G + + +F
Sbjct: 508 DMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVF 567
Query: 125 GRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLD 184
R+ R + W MI Y G GE+AL+ F +M G PD ++++ AC+ GL+D
Sbjct: 568 ERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVD 627
Query: 185 AGKQ-IHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGF 243
G M H + ++P +++ YA DL++
Sbjct: 628 EGLACFEKMKTHYK--IDP-----MIEHYACVVDLLSR---------------------- 658
Query: 244 AINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEV 290
+ K + EF ++ + I+PDA + +VL AC G + A V
Sbjct: 659 --SQKISKAEEF---IQAMPIKPDASIWASVLRACRTSGDMETAERV 700
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 209 bits (531), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 133/408 (32%), Positives = 209/408 (51%), Gaps = 14/408 (3%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE------A 63
NA+++ Y + + A +F+ + +TWS M+ G+++NG++ A +LF
Sbjct: 260 NALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIK 319
Query: 64 PHELKGVVTWTVMVD-GYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAET 122
P E V D Y +G+ + + +L ER+ F +++V Y K G +A+A
Sbjct: 320 PSEYTIVGVLNACSDICYLEEGK-QLHSFLLKLGFERHLFATTALVDMYAKAGCLADARK 378
Query: 123 IFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGL 182
F + R + +W ++I+GYVQN E AL + M+ G P++ T+ SVL AC+ L
Sbjct: 379 GFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLAT 438
Query: 183 LDAGKQIH-HMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMIS 241
L+ GKQ+H H I+H P + S L MY+KCG L + LVF +++ WNAMIS
Sbjct: 439 LELGKQVHGHTIKHGFGLEVP-IGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMIS 497
Query: 242 GFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYAIE 300
G + NG+ E LE F M + PD +TF+ ++SAC+H G + + M + ++
Sbjct: 498 GLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLD 557
Query: 301 MGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQV-IK 359
+ HY CMVDLL RAG+LKEA + I+ ++ + +L AC+ H ++ K
Sbjct: 558 PKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEK 617
Query: 360 LIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
L+ S R S V LS IY A + E++ M K GC
Sbjct: 618 LMALGS--RESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGC 663
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 155/329 (47%), Gaps = 8/329 (2%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFD----EAPH 65
+++ Y + G +E VF MP + TWS M+ G+A G A ++F+ E
Sbjct: 157 TSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEE 216
Query: 66 ELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCF----VWSSMVSGYCKKGSVAEAE 121
+T ++ A + R++ + + + +++V+ Y K S+ EA
Sbjct: 217 GSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEAC 276
Query: 122 TIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLG 181
+F R+ W+ M+ GY QNG A++ F M + G +P E+T+V VL+AC+ +
Sbjct: 277 KMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDIC 336
Query: 182 LLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMIS 241
L+ GKQ+H + + F + LVDMYAK G L +AR F+ +R++ W ++IS
Sbjct: 337 YLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLIS 396
Query: 242 GFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEM 301
G+ N E L + RM+ I P+ T +VL AC+ L +V + +
Sbjct: 397 GYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGL 456
Query: 302 GIKHYGCMVDLLGRAGRLKEAYDLIKRMP 330
+ + + + G L++ + +R P
Sbjct: 457 EVPIGSALSTMYSKCGSLEDGNLVFRRTP 485
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 180/394 (45%), Gaps = 47/394 (11%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNG---DTATARRLFDE--AP 64
N +++ Y + G + A +F + K V+W+ +I G+++NG + T +LF E A
Sbjct: 53 NVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ 112
Query: 65 HELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCF----VWSSMVSGYCKKGSVAEA 120
L T + + R+ L+ + + F V +S+V YCK G V +
Sbjct: 113 DILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDG 172
Query: 121 ETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEM---RAEGFEPDEFTVVSVLSAC 177
+F +P R+ W+TM++GY G E A++ F + EG + D + +VLS+
Sbjct: 173 LKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSSL 231
Query: 178 AQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWN 237
A + G+QIH + L + + LV MY+KC L A +F+ RN W+
Sbjct: 232 AATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWS 291
Query: 238 AMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAY 297
AM++G++ NG+ E ++ F RM + I+P T + VL+AC+ L E ++ S +
Sbjct: 292 AMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKL 351
Query: 298 AIEMGIKHYGCMVDLLGRAGRL-------------------------------KEAYDLI 326
E + +VD+ +AG L +EA L
Sbjct: 352 GFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILY 411
Query: 327 KRMPME---PNETVLGAMLGACRTHSDMKMAEQV 357
+RM PN+ + ++L AC + + +++ +QV
Sbjct: 412 RRMKTAGIIPNDPTMASVLKACSSLATLELGKQV 445
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 122/253 (48%), Gaps = 31/253 (12%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
+ ER+V W ++ISGY++N D E A +++ M G N T +
Sbjct: 383 LQERDVALWTSLISGYVQNSDNEEALILYRRMK----------TAGIIPNDPTMASV--- 429
Query: 61 DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFEL-MPERNCFVWSSMVSGYCKKGSVAE 119
LK + + G G + F L +P + S++ + Y K GS+ +
Sbjct: 430 ------LKACSSLATLELGKQVHGH--TIKHGFGLEVP-----IGSALSTMYSKCGSLED 476
Query: 120 AETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQ 179
+F R P + + WN MI+G NG G+ AL+ FEEM AEG EPD+ T V+++SAC+
Sbjct: 477 GNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSH 536
Query: 180 LGLLDAGKQIHHMIEHKRLTVNPFV--LSGLVDMYAKCGDLVNARLVFEGFT-QRNICCW 236
G ++ G +M+ ++ ++P V + +VD+ ++ G L A+ E +C W
Sbjct: 537 KGFVERGWFYFNMMS-DQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLW 595
Query: 237 NAMISGFAINGKC 249
++S +GKC
Sbjct: 596 RILLSACKNHGKC 608
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 117/321 (36%), Positives = 187/321 (58%), Gaps = 14/321 (4%)
Query: 100 NCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMR 159
+ +V + ++ Y G + A +F +P RSL WN+MI V+ G + ALQ F EM+
Sbjct: 185 DVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ 244
Query: 160 AEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHK---RLTVNPFVLSGLVDMYAKCG 216
FEPD +T+ SVLSACA LG L G H + K + ++ V + L++MY KCG
Sbjct: 245 -RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCG 303
Query: 217 DLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRM--ENLNIRPDAITFLTV 274
L A VF+G +R++ WNAMI GFA +G+ E + FF RM + N+RP+++TF+ +
Sbjct: 304 SLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGL 363
Query: 275 LSACAHGGLLSEALEVISKM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEP 333
L AC H G +++ + M Y IE ++HYGC+VDL+ RAG + EA D++ MPM+P
Sbjct: 364 LIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKP 423
Query: 334 NETVLGAMLGA-CRTHSDMKMAEQVIK-LIGTNSITRADSHN-----VLLSNIYAASEKW 386
+ + ++L A C+ + ++++E++ + +IGT + + N VLLS +YA++ +W
Sbjct: 424 DAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRW 483
Query: 387 EKAEKMRGIMVDGESEKIAGC 407
+R +M + K GC
Sbjct: 484 NDVGIVRKLMSEHGIRKEPGC 504
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 131/307 (42%), Gaps = 59/307 (19%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
+V N +I Y G ++ A VF+EMP ++ V+W+ MI R G+ +A +LF E
Sbjct: 185 DVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ 244
Query: 65 HELKGVVTWTVMVDGYARKGEMEAAREVFEL--------MPERNC--------FVWSSMV 108
+ DGY + + A + L R C V +S++
Sbjct: 245 RSFEP--------DGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLI 296
Query: 109 SGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEM--RAEGFEPD 166
YCK GS+ AE +F + R L WN MI G+ +G E A+ F+ M + E P+
Sbjct: 297 EMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPN 356
Query: 167 EFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFE 226
T V +L AC G ++ G+Q M+ V + + ++ Y DL+ AR
Sbjct: 357 SVTFVGLLIACNHRGFVNKGRQYFDMM------VRDYCIEPALEHYGCIVDLI-AR---- 405
Query: 227 GFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSE 286
+G+ + E + ++ ++PDA+ + ++L AC G E
Sbjct: 406 --------------AGY--------ITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVE 443
Query: 287 ALEVISK 293
E I++
Sbjct: 444 LSEEIAR 450
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 87/186 (46%), Gaps = 3/186 (1%)
Query: 102 FVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQN-GFGERALQAFEEMRA 160
F++ ++ V A +F I S +WNT+I + E A + +M
Sbjct: 84 FLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLE 143
Query: 161 EG-FEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLV 219
G PD+ T VL ACA + GKQ+H I + +V +GL+ +Y CG L
Sbjct: 144 RGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLD 203
Query: 220 NARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA 279
AR VF+ +R++ WN+MI G+ L+ F M+ + PD T +VLSACA
Sbjct: 204 LARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACA 262
Query: 280 HGGLLS 285
G LS
Sbjct: 263 GLGSLS 268
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 129/412 (31%), Positives = 215/412 (52%), Gaps = 11/412 (2%)
Query: 5 NVVTWNAMISGYMRNGDMESASL-VFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEA 63
NVV + ++ Y + + SL VF MP + +W+ +IG F+R+G + + LF
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 64 PHE---LKGVVTWTVMVDGYARKGEMEAAREV----FELMPERNCFVWSSMVSGYCKKGS 116
E T +++ + E ++ + +L + FV S++V Y G
Sbjct: 125 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGK 184
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+ A +F +PVR ++ M GYVQ G L F EM GF D +VS+L A
Sbjct: 185 LLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMA 244
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
C QLG L GK +H + + + + + DMY KC L A VF ++R++ W
Sbjct: 245 CGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISW 304
Query: 237 NAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA 296
+++I G+ ++G + F M I P+A+TFL VLSACAHGGL+ ++ M+
Sbjct: 305 SSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQE 364
Query: 297 YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQ 356
Y I +KHY + D + RAG L+EA ++ MP++P+E V+GA+L C+ + ++++ E+
Sbjct: 365 YNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGER 424
Query: 357 VIK-LIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
V + LI R S+ V L+ +Y+A+ ++++AE +R M + + K+ GC
Sbjct: 425 VARELIQLK--PRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGC 474
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 208 bits (530), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 131/413 (31%), Positives = 217/413 (52%), Gaps = 15/413 (3%)
Query: 4 RNVVTWNAMISGYMRNGDMESASLVFEEMPGKT---GVTWSQMIGGFARNGDTATARRLF 60
R V+ WN+MISGY+ N A ++F EM +T T + +I G T +++
Sbjct: 282 RCVILWNSMISGYIANNMKMEALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMH 341
Query: 61 DEAPH--ELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVA 118
A + +V + ++D Y++ G A ++F + + + +SM+ Y G +
Sbjct: 342 CHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRID 401
Query: 119 EAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACA 178
+A+ +F RI +SL WN+M G+ QNG L+ F +M DE ++ SV+SACA
Sbjct: 402 DAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACA 461
Query: 179 QLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNA 238
+ L+ G+Q+ L + V S L+D+Y KCG + + R VF+ + + WN+
Sbjct: 462 SISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNS 521
Query: 239 MISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA-Y 297
MISG+A NG+ E ++ F +M IRP ITF+ VL+AC + GL+ E ++ M+ +
Sbjct: 522 MISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDH 581
Query: 298 AIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHS----DMKM 353
+H+ CMVDLL RAG ++EA +L++ MP + + ++ ++L C + K
Sbjct: 582 GFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKA 641
Query: 354 AEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
AE++I+L NS+ V LS I+A S WE + +R +M + K G
Sbjct: 642 AEKIIELEPENSVAY-----VQLSAIFATSGDWESSALVRKLMRENNVTKNPG 689
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/378 (30%), Positives = 182/378 (48%), Gaps = 54/378 (14%)
Query: 38 VTWSQMIGGFARNGDTATARRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMP 97
+ + ++ ++R+G AR LFDE P + +W M++GY GE + F++MP
Sbjct: 63 IVANHLLQMYSRSGKMGIARNLFDEMPD--RNYFSWNTMIEGYMNSGEKGTSLRFFDMMP 120
Query: 98 ERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEE 157
ER+ + W+ +VSG+ K G ++ A +F +P + + N+++ GY+ NG+ E AL+ F+E
Sbjct: 121 ERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKE 180
Query: 158 MRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGD 217
+ F D T+ +VL ACA+L L GKQIH I + + + S LV++YAKCGD
Sbjct: 181 L---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGD 237
Query: 218 L------------------------------VN-ARLVFEGFTQRNICCWNAMISGFAIN 246
L VN +R +F+ + R + WN+MISG+ N
Sbjct: 238 LRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIAN 297
Query: 247 GKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMG---- 302
E L F M N R D+ T V++AC G LE +M +A + G
Sbjct: 298 NMKMEALVLFNEMRN-ETREDSRTLAAVINACIGLGF----LETGKQMHCHACKFGLIDD 352
Query: 303 IKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETV-LGAMLG---ACRTHSDMKMAEQVI 358
I ++D+ + G EA L +E +T+ L +M+ +C D K + I
Sbjct: 353 IVVASTLLDMYSKCGSPMEACKLFSE--VESYDTILLNSMIKVYFSCGRIDDAKRVFERI 410
Query: 359 K---LIGTNSITRADSHN 373
+ LI NS+T S N
Sbjct: 411 ENKSLISWNSMTNGFSQN 428
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 175/415 (42%), Gaps = 101/415 (24%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
MP+RN +WN MI GYM +G+ ++ F+ MP + G +W+ ++ GFA+ G+ + ARRLF
Sbjct: 88 MPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLF 147
Query: 61 DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMP----------------------- 97
+ P K VVT ++ GY G E A +F+ +
Sbjct: 148 NAMPE--KDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKC 205
Query: 98 -------------ERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGY-- 142
E + + SS+V+ Y K G + A + +I + +I+GY
Sbjct: 206 GKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYAN 265
Query: 143 -----------------------------VQNGFGERALQAFEEMRAEGFEPDEFTVVSV 173
+ N AL F EMR E E D T+ +V
Sbjct: 266 CGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETRE-DSRTLAAV 324
Query: 174 LSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGD---------------- 217
++AC LG L+ GKQ+H L + V S L+DMY+KCG
Sbjct: 325 INACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDT 384
Query: 218 -LVN--------------ARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENL 262
L+N A+ VFE +++ WN+M +GF+ NG E LE+F +M L
Sbjct: 385 ILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKL 444
Query: 263 NIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAG 317
++ D ++ +V+SACA L +V ++ ++ ++DL + G
Sbjct: 445 DLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCG 499
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 11/213 (5%)
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHK-RLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT 229
V +L +C+ +Q + ++ K L+ V + L+ MY++ G + AR +F+
Sbjct: 30 VRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMP 89
Query: 230 QRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALE 289
RN WN MI G+ +G+ L FF M D ++ V+S A G LS A
Sbjct: 90 DRNYFSWNTMIEGYMNSGEKGTSLRFFDMMP----ERDGYSWNVVVSGFAKAGELSVARR 145
Query: 290 VISKM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTH 348
+ + M E + + +G +++ G +EA L K + + L +L AC
Sbjct: 146 LFNAMPEKDVVTLNSLLHGYILN-----GYAEEALRLFKELNFSADAITLTTVLKACAEL 200
Query: 349 SDMKMAEQVIKLIGTNSITRADSHNVLLSNIYA 381
+K +Q+ I + N L N+YA
Sbjct: 201 EALKCGKQIHAQILIGGVECDSKMNSSLVNVYA 233
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 208 bits (529), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 127/406 (31%), Positives = 208/406 (51%), Gaps = 28/406 (6%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
+ +RN+V WN++IS Y G + A +F +M VT F +
Sbjct: 365 VSDRNIVAWNSLISLYAHRGMVIQALGLFRQM-----VTQRIKPDAFTLASSISAC---- 415
Query: 61 DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEA 120
E G+V + G+ + ++ + FV +S++ Y K GSV A
Sbjct: 416 -----ENAGLVPLGKQIHGHVIRTDVS------------DEFVQNSLIDMYSKSGSVDSA 458
Query: 121 ETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQL 180
T+F +I RS+ WN+M+ G+ QNG A+ F+ M E +E T ++V+ AC+ +
Sbjct: 459 STVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSI 518
Query: 181 GLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMI 240
G L+ GK +HH + L + F + L+DMYAKCGDL A VF + R+I W++MI
Sbjct: 519 GSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMI 577
Query: 241 SGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIE 300
+ + ++G+ + F +M +P+ + F+ VLSAC H G + E + M+++ +
Sbjct: 578 NAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVS 637
Query: 301 MGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKL 360
+H+ C +DLL R+G LKEAY IK MP + +V G+++ CR H M + + IK
Sbjct: 638 PNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDII-KAIKN 696
Query: 361 IGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
++ +T + LLSNIYA +WE+ ++R M +K+ G
Sbjct: 697 DLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPG 742
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 151/291 (51%), Gaps = 11/291 (3%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF-- 60
+ + V +++ Y + G++ A VF+ MP + V WS ++ NG+ A R+F
Sbjct: 133 DDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKC 192
Query: 61 --DEAPHELKGVVTWTVMVDGYARKGEMEAAREVF----ELMPERNCFVWSSMVSGYCKK 114
D+ VT +V+G A G + AR V M + + + +S+++ Y K
Sbjct: 193 MVDDGVE--PDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKC 250
Query: 115 GSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVL 174
G + +E IF +I ++ W MI+ Y + F E+AL++F EM G EP+ T+ SVL
Sbjct: 251 GDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVL 310
Query: 175 SACAQLGLLDAGKQIHHMIEHKRLTVNPFVLS-GLVDMYAKCGDLVNARLVFEGFTQRNI 233
S+C +GL+ GK +H + L N LS LV++YA+CG L + V + RNI
Sbjct: 311 SSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNI 370
Query: 234 CCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLL 284
WN++IS +A G + L F +M I+PDA T + +SAC + GL+
Sbjct: 371 VAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLV 421
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 168/341 (49%), Gaps = 37/341 (10%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE---APHE 66
N++++ Y + GD+ S+ +FE++ K V+W+ MI + R + A R F E + E
Sbjct: 241 NSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIE 300
Query: 67 LKGVVTWTVM--------------VDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYC 112
V ++V+ V G+A + E++ E L ++V Y
Sbjct: 301 PNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSL----------ALVELYA 350
Query: 113 KKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVS 172
+ G +++ ET+ + R++ WN++I+ Y G +AL F +M + +PD FT+ S
Sbjct: 351 ECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLAS 410
Query: 173 VLSACAQLGLLDAGKQIH-HMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQR 231
+SAC GL+ GKQIH H+I + FV + L+DMY+K G + +A VF R
Sbjct: 411 SISACENAGLVPLGKQIHGHVIRTD--VSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHR 468
Query: 232 NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVI 291
++ WN+M+ GF+ NG E + F M + + + +TFL V+ AC+ G L + V
Sbjct: 469 SVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVH 528
Query: 292 SKMEAYAIEMGIKHY---GCMVDLLGRAGRLKEAYDLIKRM 329
K+ I G+K ++D+ + G L A + + M
Sbjct: 529 HKL----IISGLKDLFTDTALIDMYAKCGDLNAAETVFRAM 565
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 179/403 (44%), Gaps = 56/403 (13%)
Query: 4 RNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEA 63
R+ + +I Y G +S+ LVFE P + +I L D A
Sbjct: 32 RDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLI-------KCNVWCHLLDAA 84
Query: 64 PHELKGVVTWTVMVDGYARKGEMEA---ARE-----------VFELMPERNCFVWSSMVS 109
+V+ T + + + A +RE + + + + + +S++
Sbjct: 85 IDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLC 144
Query: 110 GYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFT 169
Y + G++++AE +F +PVR L W+T+++ ++NG +AL+ F+ M +G EPD T
Sbjct: 145 MYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVT 204
Query: 170 VVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT 229
++SV+ CA+LG L + +H I K ++ + + L+ MY+KCGDL+++ +FE
Sbjct: 205 MISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIA 264
Query: 230 QRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALE 289
++N W AMIS + + L F M I P+ +T +VLS+C GL+ E
Sbjct: 265 KKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKS 324
Query: 290 V-----------------ISKMEAYA---------------IEMGIKHYGCMVDLLGRAG 317
V ++ +E YA + I + ++ L G
Sbjct: 325 VHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRG 384
Query: 318 RLKEAYDLIKRM---PMEPNETVLGAMLGACRTHSDMKMAEQV 357
+ +A L ++M ++P+ L + + AC + + +Q+
Sbjct: 385 MVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQI 427
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 207 bits (528), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 215/394 (54%), Gaps = 15/394 (3%)
Query: 11 AMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF------DEAP 64
+++ Y + G MESA VF+E+P + V W ++ G+ + RLF A
Sbjct: 149 SLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLAL 208
Query: 65 HELKGVVTWTVMVDGYARK-GEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETI 123
L + + +A K G+ + +++ ++ +S++ Y K + A +
Sbjct: 209 DALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKL 268
Query: 124 FGRIPVRSLEIWNTMIAGYVQNGFGERALQAFE---EMRAEGFEPDEFTVVSVLSACAQL 180
F R++ +W T+I+G+ + ERA++AF+ +M E P++ T+ ++L +C+ L
Sbjct: 269 FETSVDRNVVMWTTLISGFAK---CERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSL 325
Query: 181 GLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMI 240
G L GK +H + + ++ + +DMYA+CG++ AR VF+ +RN+ W++MI
Sbjct: 326 GSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMI 385
Query: 241 SGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYAI 299
+ F ING E L+ F +M++ N+ P+++TF+++LSAC+H G + E + M Y +
Sbjct: 386 NAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGV 445
Query: 300 EMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIK 359
+HY CMVDLLGRAG + EA I MP++P + GA+L ACR H ++ +A ++ +
Sbjct: 446 VPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAE 505
Query: 360 LIGTNSITRADSHNVLLSNIYAASEKWEKAEKMR 393
+ + ++ + VLLSNIYA + WE +R
Sbjct: 506 KLLSMEPEKSSVY-VLLSNIYADAGMWEMVNCVR 538
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 166/353 (47%), Gaps = 12/353 (3%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMP--GKTGVTWSQMIGGFARNGDTATAR--R 58
E VV +++ + Y+++ ++ A+ F +P + +W+ ++ G++++ +
Sbjct: 36 EDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLL 95
Query: 59 LFDEAPHELKGVVTWTVM--VDGYARKGEMEAAREVFELM----PERNCFVWSSMVSGYC 112
L++ GV ++ ++ + G +E + L +++ +V S+V Y
Sbjct: 96 LYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYA 155
Query: 113 KKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVS 172
+ G++ A+ +F IPVR+ +W ++ GY++ + F MR G D T++
Sbjct: 156 QLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLIC 215
Query: 173 VLSACAQLGLLDAGKQIHHM-IEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQR 231
++ AC + GK +H + I + + ++ + ++DMY KC L NAR +FE R
Sbjct: 216 LVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDR 275
Query: 232 NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVI 291
N+ W +ISGFA + E + F +M +I P+ T +L +C+ G L V
Sbjct: 276 NVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVH 335
Query: 292 SKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGA 344
M IEM ++ +D+ R G ++ A + MP E N +M+ A
Sbjct: 336 GYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMP-ERNVISWSSMINA 387
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 129/292 (44%), Gaps = 39/292 (13%)
Query: 105 SSMVSGYCKKGSVAEAETIFGRIPV--RSLEIWNTMIAGYVQNGFG--ERALQAFEEMRA 160
SS+ + Y + + A + F RIP R+ WNT+++GY ++ L + MR
Sbjct: 43 SSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRR 102
Query: 161 EGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVN 220
D F +V + AC LGLL+ G IH + L + +V LV+MYA+ G + +
Sbjct: 103 HCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMES 162
Query: 221 ARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSA--- 277
A+ VF+ RN W ++ G+ K EV F M + + DA+T + ++ A
Sbjct: 163 AQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGN 222
Query: 278 --------CAHGGLLSEA-LEVISKMEAYAIEMGIK--------------------HYGC 308
C HG + + ++ ++A I+M +K +
Sbjct: 223 VFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTT 282
Query: 309 MVDLLGRAGRLKEAYDLIKRMPME---PNETVLGAMLGACRTHSDMKMAEQV 357
++ + R EA+DL ++M E PN+ L A+L +C + ++ + V
Sbjct: 283 LISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSV 334
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 133/315 (42%), Gaps = 53/315 (16%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEM------PGK---TGVTWSQMIGGFARNGDT 53
+RNVV W +ISG+ + A +F +M P + + S G R+G +
Sbjct: 274 DRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKS 333
Query: 54 ATARRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCK 113
+ + + V +T +D YAR G ++ AR VF++MPERN WSSM++
Sbjct: 334 VHGYMIRNGIEMD---AVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINA--- 387
Query: 114 KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSV 173
FG NG E AL F +M+++ P+ T VS+
Sbjct: 388 ----------FG------------------INGLFEEALDCFHKMKSQNVVPNSVTFVSL 419
Query: 174 LSACAQLGLLDAG-KQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRN 232
LSAC+ G + G KQ M + + +VD+ + G++ A+ + +
Sbjct: 420 LSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKP 479
Query: 233 IC-CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVI 291
+ W A++S I+ + E ++ L++ P+ + +LS + E + +
Sbjct: 480 MASAWGALLSACRIHKEVDLAGEIAEKL--LSMEPEKSSVYVLLSNIYADAGMWEMVNCV 537
Query: 292 SKMEAYAIEMGIKHY 306
+ +MGIK Y
Sbjct: 538 RR------KMGIKGY 546
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/406 (30%), Positives = 216/406 (53%), Gaps = 21/406 (5%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
N + NA++S Y + G+M + V +MP + V W+ +IGG+A + D A F
Sbjct: 379 NQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTM- 437
Query: 65 HELKGV----VTWTVMVDGYARKGEM-EAAREVFELMP----ERNCFVWSSMVSGYCKKG 115
++GV +T ++ G++ E + + + E + V +S+++ Y K G
Sbjct: 438 -RVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG 496
Query: 116 SVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLS 175
++ ++ +F + R++ WN M+A +G GE L+ +MR+ G D+F+ LS
Sbjct: 497 DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLS 556
Query: 176 ACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICC 235
A A+L +L+ G+Q+H + + F+ + DMY+KCG++ + R++
Sbjct: 557 AAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPS 616
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM- 294
WN +IS +G EV F M + I+P +TF+++L+AC+HGGL+ + L +
Sbjct: 617 WNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIA 676
Query: 295 EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDM--- 351
+ +E I+H C++DLLGR+GRL EA I +MPM+PN+ V ++L +C+ H ++
Sbjct: 677 RDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRG 736
Query: 352 -KMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIM 396
K AE + KL + DS VL SN++A + +WE E +R M
Sbjct: 737 RKAAENLSKLEPED-----DSVYVLSSNMFATTGRWEDVENVRKQM 777
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 166/369 (44%), Gaps = 17/369 (4%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFD- 61
E + N++IS G+++ A+ +F++M + ++W+ + +A+NG + R+F
Sbjct: 175 ESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSL 234
Query: 62 -EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERN----CFVWSSMVSGYCKKGS 116
H+ T + ++ + R + L+ + V ++++ Y G
Sbjct: 235 MRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGR 294
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
EA +F ++P + L WN+++A +V +G AL M + G + T S L+A
Sbjct: 295 SVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAA 354
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
C + G+ +H ++ L N + + LV MY K G++ +R V +R++ W
Sbjct: 355 CFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAW 414
Query: 237 NAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA 296
NA+I G+A + + L F M + + IT ++VLSAC L + LE + A
Sbjct: 415 NALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL---LPGDLLERGKPLHA 471
Query: 297 YAIEMGIKH----YGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMK 352
Y + G + ++ + + G L + DL + N AML A H
Sbjct: 472 YIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGH-- 528
Query: 353 MAEQVIKLI 361
E+V+KL+
Sbjct: 529 -GEEVLKLV 536
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 145/340 (42%), Gaps = 40/340 (11%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPG----KTGVTWSQMIGGFARNGDTATA 56
MP RN V+WN M+SG +R G F +M + + ++ R+G
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGS---- 56
Query: 57 RRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGS 116
+F E V V G+ K + + + +V ++++ Y G
Sbjct: 57 --MFREG-----------VQVHGFVAKSGLLS-----------DVYVSTAILHLYGVYGL 92
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
V+ + +F +P R++ W +++ GY G E + ++ MR EG +E ++ V+S+
Sbjct: 93 VSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISS 152
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
C L G+QI + L V + L+ M G++ A +F+ ++R+ W
Sbjct: 153 CGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISW 212
Query: 237 NAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA 296
N++ + +A NG E F M + ++ T T+LS H + + +
Sbjct: 213 NSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH----VDHQKWGRGIHG 268
Query: 297 YAIEMGIKHYGCMVDLLGR----AGRLKEAYDLIKRMPME 332
++MG C+ + L R AGR EA + K+MP +
Sbjct: 269 LVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK 308
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 114/266 (42%), Gaps = 32/266 (12%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
+ RN++TWNAM++ +G E + +M GV+ Q F+ G +A A+
Sbjct: 508 LDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR-SFGVSLDQF--SFSE-GLSAAAKLAV 563
Query: 61 DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEA 120
E +L G+ +L E + F++++ Y K G + E
Sbjct: 564 LEEGQQLHGLAV---------------------KLGFEHDSFIFNAAADMYSKCGEIGEV 602
Query: 121 ETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQL 180
+ RSL WN +I+ ++G+ E F EM G +P T VS+L+AC+
Sbjct: 603 VKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHG 662
Query: 181 GLLDAGKQIHHMIEHKRLTVNPFVLSGL--VDMYAKCGDLVNARLVFEGFTQR-NICCWN 237
GL+D G + MI + + P + + +D+ + G L A + N W
Sbjct: 663 GLVDKGLAYYDMIA-RDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWR 721
Query: 238 AMISGFAING---KCREVLEFFGRME 260
++++ I+G + R+ E ++E
Sbjct: 722 SLLASCKIHGNLDRGRKAAENLSKLE 747
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/313 (35%), Positives = 173/313 (55%), Gaps = 6/313 (1%)
Query: 100 NCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMR 159
+ + ++++ Y + +A +F IP R WN + + Y++N L F++M+
Sbjct: 147 DSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMK 206
Query: 160 AE---GFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCG 216
+ +PD T + L ACA LG LD GKQ+H I+ L+ + + LV MY++CG
Sbjct: 207 NDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCG 266
Query: 217 DLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLS 276
+ A VF G +RN+ W A+ISG A+NG +E +E F M I P+ T +LS
Sbjct: 267 SMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLS 326
Query: 277 ACAHGGLLSEALEVISKMEA--YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPN 334
AC+H GL++E + +M + + I+ + HYGC+VDLLGRA L +AY LIK M M+P+
Sbjct: 327 ACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPD 386
Query: 335 ETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRG 394
T+ +LGACR H D+++ E+VI + A + VLL N Y+ KWEK ++R
Sbjct: 387 STIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDY-VLLLNTYSTVGKWEKVTELRS 445
Query: 395 IMVDGESEKIAGC 407
+M + GC
Sbjct: 446 LMKEKRIHTKPGC 458
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 152/327 (46%), Gaps = 55/327 (16%)
Query: 25 ASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKGVV-----TWTVMVDG 79
A VF+E+P + V+W+ + + RN T LFD+ +++ G V T + +
Sbjct: 167 ACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQA 226
Query: 80 YARKGEMEAAREVFELMPERNCF----VWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIW 135
A G ++ ++V + + E + +++VS Y + GS+ +A +F + R++ W
Sbjct: 227 CANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSW 286
Query: 136 NTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEH 195
+I+G NGFG+ A++AF EM G P+E T+ +LSAC+ GL+ G M+
Sbjct: 287 TALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEG-----MMFF 341
Query: 196 KRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEF 255
R+ F + + Y DL+ G+ R + +
Sbjct: 342 DRMRSGEFKIKPNLHHYGCVVDLL---------------------------GRARLLDKA 374
Query: 256 FGRMENLNIRPDAITFLTVLSAC-AHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLL- 313
+ ++++ ++PD+ + T+L AC HG +E+ ++ ++ IE+ + G V LL
Sbjct: 375 YSLIKSMEMKPDSTIWRTLLGACRVHGD-----VELGERVISHLIELKAEEAGDYVLLLN 429
Query: 314 -----GRAGRLKEAYDLI--KRMPMEP 333
G+ ++ E L+ KR+ +P
Sbjct: 430 TYSTVGKWEKVTELRSLMKEKRIHTKP 456
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 4/211 (1%)
Query: 123 IFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEP-DEFTVVSVLSACAQLG 181
+F + +L NTMI + + + F +R P + + L C + G
Sbjct: 68 VFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSG 127
Query: 182 LLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMIS 241
L G QIH I + +++ L+D+Y+ C + +A VF+ +R+ WN + S
Sbjct: 128 DLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFS 187
Query: 242 GFAINGKCREVLEFFGRMENL---NIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYA 298
+ N + R+VL F +M+N ++PD +T L L ACA+ G L +V ++
Sbjct: 188 CYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENG 247
Query: 299 IEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM 329
+ + +V + R G + +AY + M
Sbjct: 248 LSGALNLSNTLVSMYSRCGSMDKAYQVFYGM 278
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/406 (30%), Positives = 216/406 (53%), Gaps = 21/406 (5%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
N + NA++S Y + G+M + V +MP + V W+ +IGG+A + D A F
Sbjct: 396 NQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTM- 454
Query: 65 HELKGV----VTWTVMVDGYARKGEM-EAAREVFELMP----ERNCFVWSSMVSGYCKKG 115
++GV +T ++ G++ E + + + E + V +S+++ Y K G
Sbjct: 455 -RVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG 513
Query: 116 SVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLS 175
++ ++ +F + R++ WN M+A +G GE L+ +MR+ G D+F+ LS
Sbjct: 514 DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLS 573
Query: 176 ACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICC 235
A A+L +L+ G+Q+H + + F+ + DMY+KCG++ + R++
Sbjct: 574 AAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPS 633
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM- 294
WN +IS +G EV F M + I+P +TF+++L+AC+HGGL+ + L +
Sbjct: 634 WNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIA 693
Query: 295 EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDM--- 351
+ +E I+H C++DLLGR+GRL EA I +MPM+PN+ V ++L +C+ H ++
Sbjct: 694 RDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRG 753
Query: 352 -KMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIM 396
K AE + KL + DS VL SN++A + +WE E +R M
Sbjct: 754 RKAAENLSKLEPED-----DSVYVLSSNMFATTGRWEDVENVRKQM 794
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 166/369 (44%), Gaps = 17/369 (4%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFD- 61
E + N++IS G+++ A+ +F++M + ++W+ + +A+NG + R+F
Sbjct: 192 ESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSL 251
Query: 62 -EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERN----CFVWSSMVSGYCKKGS 116
H+ T + ++ + R + L+ + V ++++ Y G
Sbjct: 252 MRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGR 311
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
EA +F ++P + L WN+++A +V +G AL M + G + T S L+A
Sbjct: 312 SVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAA 371
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
C + G+ +H ++ L N + + LV MY K G++ +R V +R++ W
Sbjct: 372 CFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAW 431
Query: 237 NAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA 296
NA+I G+A + + L F M + + IT ++VLSAC G L LE + A
Sbjct: 432 NALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL---LERGKPLHA 488
Query: 297 YAIEMGIKH----YGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMK 352
Y + G + ++ + + G L + DL + N AML A H
Sbjct: 489 YIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGH-- 545
Query: 353 MAEQVIKLI 361
E+V+KL+
Sbjct: 546 -GEEVLKLV 553
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 142/351 (40%), Gaps = 62/351 (17%)
Query: 1 MPERNVVTWNAMISGYMRNG---------------DMESASLVFEEMPGKTGVTWSQMIG 45
MP RN V+WN M+SG +R G ++ +S V + G + S
Sbjct: 18 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 77
Query: 46 GFARNGDTATARRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWS 105
G +G A + L D V T ++ Y G + +R+VFE MP+RN W+
Sbjct: 78 GVQVHGFVAKSGLLSD--------VYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWT 129
Query: 106 SMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEP 165
S++ GY KG E + ++ MR EG
Sbjct: 130 SLMVGYSDKGE-------------------------------PEEVIDIYKGMRGEGVGC 158
Query: 166 DEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVF 225
+E ++ V+S+C L G+QI + L V + L+ M G++ A +F
Sbjct: 159 NENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIF 218
Query: 226 EGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLS 285
+ ++R+ WN++ + +A NG E F M + ++ T T+LS H
Sbjct: 219 DQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH----V 274
Query: 286 EALEVISKMEAYAIEMGIKHYGCMVDLLGR----AGRLKEAYDLIKRMPME 332
+ + + ++MG C+ + L R AGR EA + K+MP +
Sbjct: 275 DHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK 325
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 114/266 (42%), Gaps = 32/266 (12%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
+ RN++TWNAM++ +G E + +M GV+ Q F+ G +A A+
Sbjct: 525 LDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR-SFGVSLDQF--SFSE-GLSAAAKLAV 580
Query: 61 DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEA 120
E +L G+ +L E + F++++ Y K G + E
Sbjct: 581 LEEGQQLHGLAV---------------------KLGFEHDSFIFNAAADMYSKCGEIGEV 619
Query: 121 ETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQL 180
+ RSL WN +I+ ++G+ E F EM G +P T VS+L+AC+
Sbjct: 620 VKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHG 679
Query: 181 GLLDAGKQIHHMIEHKRLTVNPFVLSGL--VDMYAKCGDLVNARLVFEGFTQR-NICCWN 237
GL+D G + MI + + P + + +D+ + G L A + N W
Sbjct: 680 GLVDKGLAYYDMIA-RDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWR 738
Query: 238 AMISGFAING---KCREVLEFFGRME 260
++++ I+G + R+ E ++E
Sbjct: 739 SLLASCKIHGNLDRGRKAAENLSKLE 764
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 5/151 (3%)
Query: 211 MYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAIT 270
MY K G + AR +F+ RN WN M+SG G E +EFF +M +L I+P +
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 271 FLTVLSACAH-GGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM 329
++++AC G + E ++V + + + ++ L G G + + + + M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 330 PMEPNETVLGAMLGACRTHSDMKMAEQVIKL 360
P + M+G +SD E+VI +
Sbjct: 121 PDRNVVSWTSLMVG----YSDKGEPEEVIDI 147
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 137/430 (31%), Positives = 222/430 (51%), Gaps = 33/430 (7%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEM------PGKTGVTWSQMIGGFARNGDTA 54
+PE +V++ A+I +++ AS F+ + P + T+ +IG + D
Sbjct: 53 IPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNE--FTFGTVIGSSTTSRDVK 110
Query: 55 TARRLFDEAPHELK-----GVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVS 109
++L A LK V + +++ Y + + AR F+ + N ++++S
Sbjct: 111 LGKQLHCYA---LKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLIS 167
Query: 110 GYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFE-PDEF 168
GY KK EA ++F +P RS+ WN +I G+ Q G E A+ F +M EG P+E
Sbjct: 168 GYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNES 227
Query: 169 TVVSVLSACAQLGLLDAGKQIHH-MIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEG 227
T ++A + + AGK IH I+ N FV + L+ Y+KCG++ ++ L F
Sbjct: 228 TFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNK 287
Query: 228 FT--QRNICCWNAMISGFAINGKCREVLEFFGRM-ENLNIRPDAITFLTVLSACAHGGLL 284
QRNI WN+MI G+A NG+ E + F +M ++ N+RP+ +T L VL AC H GL+
Sbjct: 288 LEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLI 347
Query: 285 SEALEVISK-MEAYAIE--MGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAM 341
E +K + Y + ++HY CMVD+L R+GR KEA +LIK MP++P A+
Sbjct: 348 QEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKAL 407
Query: 342 LGACRTHSDMKMAEQVIKLIGTNSITRAD----SHNVLLSNIYAASEKWEKAEKMRGIMV 397
LG C+ HS+ ++A+ + + I D S V+LSN Y+A E W+ +R M
Sbjct: 408 LGGCQIHSNKRLAK-----LAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMK 462
Query: 398 DGESEKIAGC 407
+ ++ GC
Sbjct: 463 ETGLKRFTGC 472
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 4/178 (2%)
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+ A +F IP + +I +V+ A QAF+ + G P+EFT +V+ +
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
+ GKQ+H L N FV S +++ Y K L +AR F+ N+
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 237 NAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM 294
+ISG+ + E L F M ++ +T+ V+ + G EA+ M
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSV----VTWNAVIGGFSQTGRNEEAVNTFVDM 216
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/419 (29%), Positives = 210/419 (50%), Gaps = 21/419 (5%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
+ +RN V +N+++ G + G +E A +F M K V+W+ MI G A+NG A F
Sbjct: 200 LDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIECF 258
Query: 61 DEAPHELKGV----VTWTVMVDGYARKGEMEAAREVFELMPERN----CFVWSSMVSGYC 112
E +++G+ + ++ G + +++ + N +V S+++ YC
Sbjct: 259 REM--KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYC 316
Query: 113 KKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVS 172
K + A+T+F R+ +++ W M+ GY Q G E A++ F +M+ G +PD +T+
Sbjct: 317 KCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQ 376
Query: 173 VLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRN 232
+SACA + L+ G Q H L V + LV +Y KCGD+ ++ +F R+
Sbjct: 377 AISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRD 436
Query: 233 ICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVIS 292
W AM+S +A G+ E ++ F +M ++PD +T V+SAC+ GL+ +
Sbjct: 437 AVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFK 496
Query: 293 KMEA-YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDM 351
M + Y I I HY CM+DL R+GRL+EA I MP P+ +L ACR ++
Sbjct: 497 LMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNL 556
Query: 352 KMAEQVIKLIGTNSITRADSHN----VLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
++ + S+ D H+ LLS+IYA+ KW+ ++R M + +K G
Sbjct: 557 EIGKW-----AAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPG 610
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 173/371 (46%), Gaps = 47/371 (12%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
+P+ N+ +WN ++ Y + G + FE++P + GVTW+ +I G++ +G A + +
Sbjct: 67 IPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAY 126
Query: 61 DEAPHEL------------------KGVVTWTVMVDG--------------------YAR 82
+ + G V+ + G YA
Sbjct: 127 NTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYAN 186
Query: 83 KGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGY 142
G + A++VF + +RN +++S++ G G + +A +F + S+ W MI G
Sbjct: 187 VGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVS-WAAMIKGL 245
Query: 143 VQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNP 202
QNG + A++ F EM+ +G + D++ SVL AC LG ++ GKQIH I +
Sbjct: 246 AQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHI 305
Query: 203 FVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENL 262
+V S L+DMY KC L A+ VF+ Q+N+ W AM+ G+ G+ E ++ F M+
Sbjct: 306 YVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRS 365
Query: 263 NIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHY----GCMVDLLGRAGR 318
I PD T +SACA+ L E S+ AI G+ HY +V L G+ G
Sbjct: 366 GIDPDHYTLGQAISACANVSSLEEG----SQFHGKAITSGLIHYVTVSNSLVTLYGKCGD 421
Query: 319 LKEAYDLIKRM 329
+ ++ L M
Sbjct: 422 IDDSTRLFNEM 432
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 120/247 (48%), Gaps = 6/247 (2%)
Query: 76 MVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIW 135
+V YA AR VF+ +P+ N F W++++ Y K G ++E E+ F ++P R W
Sbjct: 47 IVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTW 106
Query: 136 NTMIAGYVQNGFGERALQAFEE-MRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIE 194
N +I GY +G A++A+ MR T++++L + G + GKQIH +
Sbjct: 107 NVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVI 166
Query: 195 HKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLE 254
V S L+ MYA G + +A+ VF G RN +N+++ G G + L+
Sbjct: 167 KLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQ 226
Query: 255 FFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLG 314
F ME D++++ ++ A GL EA+E +M+ ++M +G ++ G
Sbjct: 227 LFRGMEK-----DSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACG 281
Query: 315 RAGRLKE 321
G + E
Sbjct: 282 GLGAINE 288
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 113/301 (37%), Positives = 169/301 (56%), Gaps = 10/301 (3%)
Query: 111 YCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
Y G + A +F + +R L WN MI+GYVQ G + L + +MR PD++T
Sbjct: 153 YALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTF 212
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ 230
SV AC+ L L+ GK+ H ++ + + N V S LVDMY KC + VF+ +
Sbjct: 213 ASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLST 272
Query: 231 RNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEV 290
RN+ W ++ISG+ +GK EVL+ F +M+ RP+ +TFL VL+AC HGGL+ + E
Sbjct: 273 RNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEH 332
Query: 291 ISKMEA-YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHS 349
M+ Y IE +HY MVD LGRAGRL+EAY+ + + P + + V G++LGACR H
Sbjct: 333 FYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHG 392
Query: 350 DMKMAE----QVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIA 405
++K+ E + ++L TN + V+ +N YA+ E A K+R M + +K
Sbjct: 393 NVKLLELAATKFLELDPTNG-----GNYVVFANGYASCGLREAASKVRRKMENAGVKKDP 447
Query: 406 G 406
G
Sbjct: 448 G 448
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 133/291 (45%), Gaps = 15/291 (5%)
Query: 16 YMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHE--LKGVVTW 73
Y +GD+++A ++F + + + W+ MI G+ + G ++ + + T+
Sbjct: 153 YALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTF 212
Query: 74 TVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKGSVAEAETIFGRIPV 129
+ + +E + +M +R N V S++V Y K S ++ +F ++
Sbjct: 213 ASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLST 272
Query: 130 RSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQI 189
R++ W ++I+GY +G L+ FE+M+ EG P+ T + VL+AC GL+D G +
Sbjct: 273 RNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE- 331
Query: 190 HHMIEHKR-LTVNP--FVLSGLVDMYAKCGDLVNA-RLVFEGFTQRNICCWNAMISGFAI 245
H KR + P + +VD + G L A V + + + W +++ I
Sbjct: 332 -HFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRI 390
Query: 246 NGKCREVLEFFGRMENLNIRP-DAITFLTVLSACAHGGLLSEALEVISKME 295
+G + +LE + L + P + ++ + A GL A +V KME
Sbjct: 391 HGNVK-LLE-LAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKME 439
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 73/163 (44%), Gaps = 6/163 (3%)
Query: 120 AETIFGRIPV---RSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
AE GR V R E + + G G R +A + + G + + T +L
Sbjct: 61 AEKRIGRFQVENQRKTEKLDKTLKGLCVTG---RLKEAVGLLWSSGLQVEPETYAVLLQE 117
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
C Q GK+IH + +N ++ L+ +YA GDL A ++F R++ W
Sbjct: 118 CKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPW 177
Query: 237 NAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA 279
NAMISG+ G +E L + M I PD TF +V AC+
Sbjct: 178 NAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACS 220
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/352 (32%), Positives = 188/352 (53%), Gaps = 44/352 (12%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
MPE +VV+W MI+G+ + D+E+A F+ MP K+ V+W+ M+ G+A+NG T A RLF
Sbjct: 193 MPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLF 252
Query: 61 DEA------PHELKGVVTW-------------------------------TVMVDGYARK 83
++ P+E V+ T ++D +A+
Sbjct: 253 NDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKC 312
Query: 84 GEMEAAREVF-ELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGY 142
++++AR +F EL +RN W++M+SGY + G ++ A +F +P R++ WN++IAGY
Sbjct: 313 RDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGY 372
Query: 143 VQNGFGERALQAFEEMRAEG-FEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVN 201
NG A++ FE+M G +PDE T++SVLSAC + L+ G I I ++ +N
Sbjct: 373 AHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLN 432
Query: 202 PFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMEN 261
L+ MYA+ G+L A+ VF+ +R++ +N + + FA NG E L +M++
Sbjct: 433 DSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKD 492
Query: 262 LNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLL 313
I PD +T+ +VL+AC GLL E + + + HY CM DLL
Sbjct: 493 EGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRNPLAD----HYACM-DLL 539
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 163/316 (51%), Gaps = 35/316 (11%)
Query: 47 FARNGDTATARRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSS 106
+ ++ +AR++FD+ KG W VM+ GY + G E A ++F++MPE + W+
Sbjct: 146 YVKHESVESARKVFDQISQR-KGS-DWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTV 203
Query: 107 MVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
M++G+ K + A F R+P +S+ WN M++GY QNGF E AL+ F +M G P+
Sbjct: 204 MITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPN 263
Query: 167 EFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKC----------- 215
E T V V+SAC+ + + +I+ KR+ +N FV + L+DM+AKC
Sbjct: 264 ETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFN 323
Query: 216 ---------------------GDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLE 254
GD+ +AR +F+ +RN+ WN++I+G+A NG+ +E
Sbjct: 324 ELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIE 383
Query: 255 FFGRMENL-NIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLL 313
FF M + + +PD +T ++VLSAC H L ++ + I++ Y ++ +
Sbjct: 384 FFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMY 443
Query: 314 GRAGRLKEAYDLIKRM 329
R G L EA + M
Sbjct: 444 ARGGNLWEAKRVFDEM 459
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 127/288 (44%), Gaps = 22/288 (7%)
Query: 80 YARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAET--IFGRIPVRSLEIWNT 137
+ + ++ A VF +P ++ W+S + C + T IF + ++ + N+
Sbjct: 19 FPQLNQIHAQLIVFNSLPRQS--YWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNS 76
Query: 138 MIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKR 197
M + + L+ +E+ G PD F+ V+ + + G+L ++E
Sbjct: 77 MFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGIL-----FQALVEKLG 131
Query: 198 LTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFG 257
+P+V + ++DMY K + +AR VF+ +QR WN MISG+ G E + F
Sbjct: 132 FFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFD 191
Query: 258 RM-ENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRA 316
M EN D +++ +++ A L A + +M E + + M+ +
Sbjct: 192 MMPEN-----DVVSWTVMITGFAKVKDLENARKYFDRMP----EKSVVSWNAMLSGYAQN 242
Query: 317 GRLKEAYDLIK---RMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLI 361
G ++A L R+ + PNET ++ AC +D + ++KLI
Sbjct: 243 GFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLI 290
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/310 (35%), Positives = 182/310 (58%), Gaps = 4/310 (1%)
Query: 100 NCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMR 159
+ ++ +++V Y + G V A +FG +PVR++ W+ MIA Y +NG AL+ F EM
Sbjct: 216 HVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMM 275
Query: 160 AEGFE--PDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGD 217
E + P+ T+VSVL ACA L L+ GK IH I + L V+S LV MY +CG
Sbjct: 276 RETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGK 335
Query: 218 LVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSA 277
L + VF+ R++ WN++IS + ++G ++ ++ F M P +TF++VL A
Sbjct: 336 LEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGA 395
Query: 278 CAHGGLLSEALEVISKM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNET 336
C+H GL+ E + M + I+ I+HY CMVDLLGRA RL EA +++ M EP
Sbjct: 396 CSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPK 455
Query: 337 VLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIM 396
V G++LG+CR H ++++AE+ + + A ++ VLL++IYA ++ W++ ++++ ++
Sbjct: 456 VWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNY-VLLADIYAEAQMWDEVKRVKKLL 514
Query: 397 VDGESEKIAG 406
+K+ G
Sbjct: 515 EHRGLQKLPG 524
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 141/304 (46%), Gaps = 16/304 (5%)
Query: 38 VTWSQMIGGFARNGDTATARRLFDEAPHELKGVVTWTVMVDGY--ARKGEMEAAREVFEL 95
++ +Q+I + G A R+ + + ++ G+ + + R + +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDN 106
Query: 96 MPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAF 155
+++ F+ + ++ Y GSV A +F + R++ +WN + G GE L +
Sbjct: 107 GSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLY 166
Query: 156 EEMRAEGFEPDEFTVVSVLSACA----QLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDM 211
+M G E D FT VL AC + L GK+IH + + + + ++++ LVDM
Sbjct: 167 WKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDM 226
Query: 212 YAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRM--ENLNIRPDAI 269
YA+ G + A VF G RN+ W+AMI+ +A NGK E L F M E + P+++
Sbjct: 227 YARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSV 286
Query: 270 TFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKH----YGCMVDLLGRAGRLKEAYDL 325
T ++VL ACA ALE + Y + G+ +V + GR G+L+ +
Sbjct: 287 TMVSVLQACASLA----ALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRV 342
Query: 326 IKRM 329
RM
Sbjct: 343 FDRM 346
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 125/254 (49%), Gaps = 12/254 (4%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
+V ++ Y R G ++ AS VF MP + V+WS MI +A+NG A R F E
Sbjct: 216 HVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMM 275
Query: 65 HELK----GVVTWTVMVDGYARKGEMEAAREVFELMPERN----CFVWSSMVSGYCKKGS 116
E K VT ++ A +E + + + R V S++V+ Y + G
Sbjct: 276 RETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGK 335
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+ + +F R+ R + WN++I+ Y +G+G++A+Q FEEM A G P T VSVL A
Sbjct: 336 LEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGA 395
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFV--LSGLVDMYAKCGDLVN-ARLVFEGFTQRNI 233
C+ GL++ GK++ + + P + + +VD+ + L A++V + T+
Sbjct: 396 CSHEGLVEEGKRLFETMWRDH-GIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGP 454
Query: 234 CCWNAMISGFAING 247
W +++ I+G
Sbjct: 455 KVWGSLLGSCRIHG 468
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 83/200 (41%), Gaps = 8/200 (4%)
Query: 136 NTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEH 195
N +I + G ++A++ + + P + T ++ C L ++H I
Sbjct: 50 NQLIQSLCKEGKLKQAIRVLSQESS----PSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 196 KRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEF 255
+PF+ + L+ MY+ G + AR VF+ +R I WNA+ + G EVL
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 256 FGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHY----GCMVD 311
+ +M + + D T+ VL AC L ++ A+ G + +VD
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVD 225
Query: 312 LLGRAGRLKEAYDLIKRMPM 331
+ R G + A + MP+
Sbjct: 226 MYARFGCVDYASYVFGGMPV 245
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 10/136 (7%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEM----PGKTGVTWSQMIGGFARNGDTATA 56
M +R+VV+WN++IS Y +G + A +FEEM T VT+ ++G + G
Sbjct: 346 MHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEG 405
Query: 57 RRLFDE--APHELKGVVT-WTVMVDGYARKGEM-EAAREVFELMPERNCFVWSSMVSGYC 112
+RLF+ H +K + + MVD R + EAA+ V ++ E VW S++ G C
Sbjct: 406 KRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLL-GSC 464
Query: 113 K-KGSVAEAETIFGRI 127
+ G+V AE R+
Sbjct: 465 RIHGNVELAERASRRL 480
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/416 (32%), Positives = 219/416 (52%), Gaps = 22/416 (5%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTG--VTWSQMIGGFARNGDTATARRLF 60
++N+ T A++ Y + M A +F+E+ G G V+W+ MI GF +N A LF
Sbjct: 329 DQNIRT--ALMVAYSKCTAMLDALRLFKEI-GCVGNVVSWTAMISGFLQNDGKEEAVDLF 385
Query: 61 DEAPHELKGV----VTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGS 116
E KGV T++V++ E +V + ER+ V ++++ Y K G
Sbjct: 386 SEMKR--KGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGK 443
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
V EA +F I + + W+ M+AGY Q G E A++ F E+ G +P+EFT S+L+
Sbjct: 444 VEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNV 503
Query: 177 CAQLGL-LDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICC 235
CA + GKQ H RL + V S L+ MYAK G++ +A VF+ ++++
Sbjct: 504 CAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVS 563
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM- 294
WN+MISG+A +G+ + L+ F M+ ++ D +TF+ V +AC H GL+ E + M
Sbjct: 564 WNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMV 623
Query: 295 EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKM- 353
I +H CMVDL RAG+L++A +I+ MP T+ +L ACR H ++
Sbjct: 624 RDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELG 683
Query: 354 ---AEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
AE++I + +S + VLLSN+YA S W++ K+R +M + +K G
Sbjct: 684 RLAAEKIIAMKPEDS-----AAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPG 734
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 142/302 (47%), Gaps = 19/302 (6%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
+V +++ YM+ + + VF+EM + VTW+ +I G+ARN LF
Sbjct: 127 DVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQ 186
Query: 65 HELKGVVTWTVMV-------DGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSV 117
+E ++T +G +G ++ V + ++ V +S+++ Y K G+V
Sbjct: 187 NEGTQPNSFTFAAALGVLAEEGVGGRG-LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNV 245
Query: 118 AEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSAC 177
+A +F + V+S+ WN+MI+GY NG AL F MR E + SV+ C
Sbjct: 246 RKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLC 305
Query: 178 AQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA-RLVFEGFTQRNICCW 236
A L L +Q+H + + + + L+ Y+KC +++A RL E N+ W
Sbjct: 306 ANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSW 365
Query: 237 NAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA 296
AMISGF N E ++ F M+ +RP+ T+ +L+ AL VIS E
Sbjct: 366 TAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT----------ALPVISPSEV 415
Query: 297 YA 298
+A
Sbjct: 416 HA 417
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/452 (23%), Positives = 184/452 (40%), Gaps = 111/452 (24%)
Query: 15 GYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF-------------- 60
G + + + +A +F++ PG+ ++ ++ GF+R+G T A+RLF
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 61 ------------DEAPHE-----------LKGVVTWTVMVDGYARKGEMEAAREVFELMP 97
DE L V T +VD Y + + R+VF+ M
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 98 ERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEE 157
ERN W++++SGY + N + L F
Sbjct: 156 ERNVVTWTTLISGYAR-------------------------------NSMNDEVLTLFMR 184
Query: 158 MRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGD 217
M+ EG +P+ FT + L A+ G+ G Q+H ++ L V + L+++Y KCG+
Sbjct: 185 MQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGN 244
Query: 218 LVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSA 277
+ AR++F+ +++ WN+MISG+A NG E L F M +R +F +V+
Sbjct: 245 VRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKL 304
Query: 278 CA-----------------HGGLLSEALEVISKMEAY--------AIEMGIKHYGCMVDL 312
CA +G L + + + M AY A+ + K GC+ ++
Sbjct: 305 CANLKELRFTEQLHCSVVKYGFLFDQNIRT-ALMVAYSKCTAMLDALRL-FKEIGCVGNV 362
Query: 313 LGRAGRL---------KEAYDL---IKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKL 360
+ + +EA DL +KR + PNE +L A S ++ QV+K
Sbjct: 363 VSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVK- 421
Query: 361 IGTNSITRADSHNVLLSNIYAASEKWEKAEKM 392
+ R+ + L + Y K E+A K+
Sbjct: 422 ---TNYERSSTVGTALLDAYVKLGKVEEAAKV 450
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 205 bits (522), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 108/313 (34%), Positives = 179/313 (57%), Gaps = 10/313 (3%)
Query: 100 NCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMR 159
+ ++ SS+V Y G V A +F +P R++ W MI+G+ Q + L+ + +MR
Sbjct: 154 DVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMR 213
Query: 160 AEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLV 219
+P+++T ++LSAC G L G+ +H H L + + L+ MY KCGDL
Sbjct: 214 KSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLK 273
Query: 220 NARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFG-RMENLNIRPDAITFLTVLSAC 278
+A +F+ F+ +++ WN+MI+G+A +G + +E F M +PDAIT+L VLS+C
Sbjct: 274 DAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSC 333
Query: 279 AHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVL 338
H GL+ E + + M + ++ + HY C+VDLLGR G L+EA +LI+ MPM+PN +
Sbjct: 334 RHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIW 393
Query: 339 GAMLGACRTHSD----MKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRG 394
G++L +CR H D ++ AE+ + L + T +V L+N+YA+ W++A +R
Sbjct: 394 GSLLFSCRVHGDVWTGIRAAEERLMLEPDCAAT-----HVQLANLYASVGYWKEAATVRK 448
Query: 395 IMVDGESEKIAGC 407
+M D + GC
Sbjct: 449 LMKDKGLKTNPGC 461
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 142/300 (47%), Gaps = 11/300 (3%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
+V ++++ Y +G++E+A VFEEMP + V+W+ MI GFA+ +L+ +
Sbjct: 154 DVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMR 213
Query: 65 HELKGV--VTWTVMVDGYARKGEMEAAREV----FELMPERNCFVWSSMVSGYCKKGSVA 118
T+T ++ G + R V + + + +S++S YCK G +
Sbjct: 214 KSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLK 273
Query: 119 EAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAE-GFEPDEFTVVSVLSAC 177
+A IF + + + WN+MIAGY Q+G +A++ FE M + G +PD T + VLS+C
Sbjct: 274 DAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSC 333
Query: 178 AQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQR-NICCW 236
GL+ G++ +++ L S LVD+ + G L A + E + N W
Sbjct: 334 RHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIW 393
Query: 237 NAMISGFAINGKCREVLEFFGRMENLNIRPD-AITFLTVLSACAHGGLLSEALEVISKME 295
+++ ++G + E L + PD A T + + + A G EA V M+
Sbjct: 394 GSLLFSCRVHGDVWTGIR--AAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMK 451
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 13/220 (5%)
Query: 158 MRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGD 217
++ +G+ D + + S + +C G H + + ++ S LV +Y G+
Sbjct: 111 VKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGE 170
Query: 218 LVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSA 277
+ NA VFE +RN+ W AMISGFA + L+ + +M P+ TF +LSA
Sbjct: 171 VENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSA 230
Query: 278 CAHGGLLSEALEVISKMEAYAIEMGIKHY----GCMVDLLGRAGRLKEAYDLIKRMPMEP 333
C G L + V + MG+K Y ++ + + G LK+A+ + +
Sbjct: 231 CTGSGALGQGRSV----HCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQF---S 283
Query: 334 NETVLG--AMLGACRTHSDMKMAEQVIKLIGTNSITRADS 371
N+ V+ +M+ H A ++ +L+ S T+ D+
Sbjct: 284 NKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDA 323
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 15/204 (7%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFD---EAPHE 66
N++IS Y + GD++ A +F++ K V+W+ MI G+A++G A LF+
Sbjct: 260 NSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGT 319
Query: 67 LKGVVTWTVMVDGYARKGEMEAAREVFELM------PERNCFVWSSMVSGYCKKGSVAEA 120
+T+ ++ G ++ R+ F LM PE N + S +V + G + EA
Sbjct: 320 KPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHY--SCLVDLLGRFGLLQEA 377
Query: 121 ETIFGRIPVRSLE-IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD-EFTVVSVLSACA 178
+ +P++ IW +++ +G ++A EE EPD T V + + A
Sbjct: 378 LELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLM--LEPDCAATHVQLANLYA 435
Query: 179 QLGLLDAGKQIHHMIEHKRLTVNP 202
+G + +++ K L NP
Sbjct: 436 SVGYWKEAATVRKLMKDKGLKTNP 459
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 122/396 (30%), Positives = 207/396 (52%), Gaps = 8/396 (2%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
++ + N +I+ Y + G S VF+ M + +T + +I G N RLF
Sbjct: 187 DKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSL 246
Query: 63 APHEL--KGVVTWTVMVDGYARKGEMEAAREVFELM----PERNCFVWSSMVSGYCKKGS 116
L VT+ + + + +++ L+ E + S+++ Y K GS
Sbjct: 247 MRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGS 306
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+ +A TIF ++ G QNG E A+Q F M G E D V +VL
Sbjct: 307 IEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGV 366
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
L GKQ+H ++ ++ + N FV +GL++MY+KCGDL +++ VF +RN W
Sbjct: 367 SFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSW 426
Query: 237 NAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-E 295
N+MI+ FA +G L+ + M L ++P +TFL++L AC+H GL+ + E++++M E
Sbjct: 427 NSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKE 486
Query: 296 AYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAE 355
+ IE +HY C++D+LGRAG LKEA I +P++P+ + A+LGAC H D ++ E
Sbjct: 487 VHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGE 546
Query: 356 QVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEK 391
+ + + + +H +L++NIY++ KW++ K
Sbjct: 547 YAAEQLFQTAPDSSSAH-ILIANIYSSRGKWKERAK 581
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 168/373 (45%), Gaps = 21/373 (5%)
Query: 3 ERN-VVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFD 61
RN +V WN+++S Y + G + A +F+EMP + ++ + + GF RN +T + L
Sbjct: 86 HRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLK 145
Query: 62 EA------PHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKG 115
H +V + +M A + ++ V + +++ Y K G
Sbjct: 146 RMLGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGY-DKEISVGNKLITSYFKCG 204
Query: 116 SVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLS 175
+F + R++ +I+G ++N E L+ F MR P+ T +S L+
Sbjct: 205 CSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALA 264
Query: 176 ACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICC 235
AC+ + G+QIH ++ + + S L+DMY+KCG + +A +FE T+ +
Sbjct: 265 ACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVS 324
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKME 295
++ G A NG E ++FF RM + DA V+SA + +L + ++
Sbjct: 325 MTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDA----NVVSAVLGVSFIDNSLGLGKQLH 380
Query: 296 AYAIEMGIKH----YGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTH--- 348
+ I+ ++++ + G L ++ + +RMP + N +M+ A H
Sbjct: 381 SLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSMIAAFARHGHG 439
Query: 349 -SDMKMAEQVIKL 360
+ +K+ E++ L
Sbjct: 440 LAALKLYEEMTTL 452
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 19/177 (10%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMP----GKTGVTWSQMIGGFARNGDTATA 56
MP+RN V+WN+MI+ + R+G +A ++EEM T VT+ ++ + G
Sbjct: 418 MPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKG 477
Query: 57 RRLFDEAPHELKGVVT----WTVMVDGYARKGEMEAAREVFELMPER-NCFVWSSMVSGY 111
R L +E E+ G+ +T ++D R G ++ A+ + +P + +C +W +++ G
Sbjct: 478 RELLNEMK-EVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALL-GA 535
Query: 112 CKKGSVAE-----AETIFGRIPVRSLEIWNTMIAG-YVQNGFGERALQAFEEMRAEG 162
C E AE +F P S + +IA Y G + + + M+A G
Sbjct: 536 CSFHGDTEVGEYAAEQLFQTAPDSSSA--HILIANIYSSRGKWKERAKTIKRMKAMG 590
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 205 bits (521), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 211/415 (50%), Gaps = 15/415 (3%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
+ +V+ A++ Y++ D +A VF++M K V+W+ MI G N + LF
Sbjct: 182 QESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRA 241
Query: 63 APHE---LKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCF----VWSSMVSGYCKKG 115
E V +V+ +E+ C + ++ ++ YC+ G
Sbjct: 242 MQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCG 301
Query: 116 SVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLS 175
+V+ + +F VR + +W++MI+GY + G + +MR EG E + T+++++S
Sbjct: 302 NVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVS 361
Query: 176 ACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICC 235
AC LL +H I + + + L+DMYAKCG L AR VF T++++
Sbjct: 362 ACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVS 421
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKME 295
W++MI+ + ++G E LE F M D + FL +LSAC H GL+ EA + ++
Sbjct: 422 WSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAG 481
Query: 296 AYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAE 355
Y + + ++HY C ++LLGR G++ +A+++ MPM+P+ + ++L AC TH + +A
Sbjct: 482 KYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAG 541
Query: 356 QVIKLIGTNSITRADSHN----VLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
++I N + +++ N VLLS I+ S + AE++R +M + K G
Sbjct: 542 KII----ANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYG 592
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 2/178 (1%)
Query: 103 VWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEG 162
V +S++S Y K +F + R + ++I Q+G A++ +EM G
Sbjct: 84 VSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYG 143
Query: 163 FEPDEFTVVSVLSACAQLGLLDAGKQIHH--MIEHKRLTVNPFVLSGLVDMYAKCGDLVN 220
F P V S+L+ C ++G ++ H ++ +R+ + + + LVDMY K D
Sbjct: 144 FIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAA 203
Query: 221 ARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSAC 278
A VF+ +N W AMISG N ++ F M+ N+RP+ +T L+VL AC
Sbjct: 204 AFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPAC 261
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 138/406 (33%), Positives = 215/406 (52%), Gaps = 37/406 (9%)
Query: 8 TWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHEL 67
TWN + GY + + V+ EM + G N T P L
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRR----------GIKPNKLTF---------PFLL 120
Query: 68 KGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGY--CKKGSVAEAETIFG 125
K ++ + G R+ ++E + F+ + +V ++++ Y CKK S +A +F
Sbjct: 121 KACASFLGLTAG--RQIQVEVLKHGFDF----DVYVGNNLIHLYGTCKKTS--DARKVFD 172
Query: 126 RIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDA 185
+ R++ WN+++ V+NG + F EM + F PDE T+V +LSAC G L
Sbjct: 173 EMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSL 230
Query: 186 GKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAI 245
GK +H + + L +N + + LVDMYAK G L ARLVFE +N+ W+AMI G A
Sbjct: 231 GKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQ 290
Query: 246 NGKCREVLEFFGRM-ENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA-YAIEMGI 303
G E L+ F +M + ++RP+ +TFL VL AC+H GL+ + + +ME + I+ +
Sbjct: 291 YGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMM 350
Query: 304 KHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMK---MAEQVIKL 360
HYG MVD+LGRAGRL EAYD IK+MP EP+ V +L AC H D + E+V K
Sbjct: 351 IHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKR 410
Query: 361 IGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
+ R+ + V+++N +A + W +A ++R +M + + +KIAG
Sbjct: 411 LIELEPKRS-GNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAG 455
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 142/313 (45%), Gaps = 16/313 (5%)
Query: 98 ERNCFVWSSMV--SGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAF 155
+ + F+ S +V S +A A T+ + WN + GY + ++ +
Sbjct: 42 QNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVY 101
Query: 156 EEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKC 215
EM+ G +P++ T +L ACA L AG+QI + + +V + L+ +Y C
Sbjct: 102 SEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTC 161
Query: 216 GDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVL 275
+AR VF+ T+RN+ WN++++ NGK V E F M PD T + +L
Sbjct: 162 KKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLL 221
Query: 276 SACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNE 335
SAC GG LS V S++ +E+ + +VD+ ++G L+ A + +RM ++ N
Sbjct: 222 SAC--GGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERM-VDKNV 278
Query: 336 TVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRAD-----------SHNVLLSNIYAASE 384
AM+ + + A Q+ + S R + SH L+ + Y
Sbjct: 279 WTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFH 338
Query: 385 KWEKAEKMRGIMV 397
+ EK K++ +M+
Sbjct: 339 EMEKIHKIKPMMI 351
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 115/287 (40%), Gaps = 75/287 (26%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGK-------TGVTWSQMIGGFARNGDT 53
M ERNVV+WN++++ + NG + F EM GK T V GG G
Sbjct: 174 MTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLSLGKL 233
Query: 54 ATARRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCK 113
++ + E + T +VD YA+ G +E AR VFE M ++N + WS+M+
Sbjct: 234 VHSQVMVRELELNCR---LGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMI----- 285
Query: 114 KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAE-GFEPDEFTVVS 172
G Q GF E ALQ F +M E P+ T +
Sbjct: 286 --------------------------VGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLG 319
Query: 173 VLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRN 232
VL AC+ GL+D G + H +E K + P ++
Sbjct: 320 VLCACSHTGLVDDGYKYFHEME-KIHKIKPMMIH-------------------------- 352
Query: 233 ICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA 279
+ AM+ G+ E +F +M PDA+ + T+LSAC+
Sbjct: 353 ---YGAMVDILGRAGRLNEAYDFIKKMP---FEPDAVVWRTLLSACS 393
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 203/397 (51%), Gaps = 12/397 (3%)
Query: 20 GDMESASLVFEEMPGKTGVT-WSQMIGGFARNGDTATARRLFDE---APHELKGVVTWTV 75
G + A L+F+ + W+ +I GF+ + + ++ + + T+
Sbjct: 53 GSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNF 112
Query: 76 MVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKGSVAEAETIFGRIPVRS 131
+ R + E+ + + V +S+V Y GSV A +F +PVR
Sbjct: 113 ALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRD 172
Query: 132 LEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHH 191
L WN MI + G +AL ++ M EG D +T+V++LS+CA + L+ G +H
Sbjct: 173 LVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHR 232
Query: 192 MIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCRE 251
+ R FV + L+DMYAKCG L NA VF G +R++ WN+MI G+ ++G E
Sbjct: 233 IACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVE 292
Query: 252 VLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA-YAIEMGIKHYGCMV 310
+ FF +M +RP+AITFL +L C+H GL+ E +E M + + + +KHYGCMV
Sbjct: 293 AISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMV 352
Query: 311 DLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVI-KLIGTNSITRA 369
DL GRAG+L+ + ++I + + +LG+C+ H ++++ E + KL+ +
Sbjct: 353 DLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAG 412
Query: 370 DSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
D VL+++IY+A+ + MR ++ + + + G
Sbjct: 413 DY--VLMTSIYSAANDAQAFASMRKLIRSHDLQTVPG 447
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 116/253 (45%), Gaps = 14/253 (5%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
+ + +++ Y NG +E AS VF+EMP + V+W+ MI F+ G A ++
Sbjct: 141 DAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMG 200
Query: 65 HELKGVV----TWTVMVDGYARKGEMEAAREVFELMPERNC----FVWSSMVSGYCKKGS 116
+E GV T ++ A + + + + C FV ++++ Y K GS
Sbjct: 201 NE--GVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGS 258
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+ A +F + R + WN+MI GY +G G A+ F +M A G P+ T + +L
Sbjct: 259 LENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLG 318
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFV--LSGLVDMYAKCGDLVNA-RLVFEGFTQRNI 233
C+ GL+ G + H I + + P V +VD+Y + G L N+ +++ +
Sbjct: 319 CSHQGLVKEGVE-HFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDP 377
Query: 234 CCWNAMISGFAIN 246
W ++ I+
Sbjct: 378 VLWRTLLGSCKIH 390
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 132/425 (31%), Positives = 206/425 (48%), Gaps = 56/425 (13%)
Query: 1 MPERN-VVTWNAMISGYMRNGDMESASLVF----EEMPGKTGVTWSQMIGGFARNGDTAT 55
+P+R+ V WNA+++GY + E A LVF EE G + T + ++ F +GD
Sbjct: 221 LPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDN 280
Query: 56 ARRLFDEAPHELKG--VVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSM--VSGY 111
R + A G +V ++D Y + +E A +FE M ER+ F W+S+ V Y
Sbjct: 281 GRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDY 340
Query: 112 CKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVV 171
C G + L FE M G PD T+
Sbjct: 341 C---------------------------------GDHDGTLALFERMLCSGIRPDIVTLT 367
Query: 172 SVLSACAQLGLLDAGKQIH-HMIEH---KRLTVNPFVLSGLVDMYAKCGDLVNARLVFEG 227
+VL C +L L G++IH +MI R + N F+ + L+DMY KCGDL +AR+VF+
Sbjct: 368 TVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDS 427
Query: 228 FTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEA 287
++ WN MI+G+ + L+ F M ++PD ITF+ +L AC+H G L+E
Sbjct: 428 MRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEG 487
Query: 288 LEVISKMEA-YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACR 346
+++ME Y I HY C++D+LGRA +L+EAY+L P+ N V ++L +CR
Sbjct: 488 RNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCR 547
Query: 347 THSDMKMAEQVIKLIGTNSITRADSHN----VLLSNIYAASEKWEKAEKMRGIMVDGESE 402
H + +A L+ + + + VL+SN+Y + K+E+ +R M +
Sbjct: 548 LHGNKDLA-----LVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVK 602
Query: 403 KIAGC 407
K GC
Sbjct: 603 KTPGC 607
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 151/327 (46%), Gaps = 21/327 (6%)
Query: 11 AMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE--APHELK 68
++++ Y + G M A LVF + ++ +I GF NG A + E A L
Sbjct: 101 SLVNMYAKCGLMRRAVLVFGGSE-RDVFGYNALISGFVVNGSPLDAMETYREMRANGILP 159
Query: 69 GVVTWTVMVDGYARKGEMEAAREV----FELMPERNCFVWSSMVSGYCKKGSVAEAETIF 124
T+ ++ G + E+ ++V F+L + +C+V S +V+ Y K SV +A+ +F
Sbjct: 160 DKYTFPSLLKG-SDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVF 218
Query: 125 GRIPVRSLEI-WNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLL 183
+P R + WN ++ GY Q E AL F +MR EG T+ SVLSA G +
Sbjct: 219 DELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDI 278
Query: 184 DAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGF 243
D G+ IH + + V + L+DMY K L A +FE +R++ WN+++
Sbjct: 279 DNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVH 338
Query: 244 AINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGI 303
G L F RM IRPD +T TVL C L + E+ Y I G+
Sbjct: 339 DYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREI----HGYMIVSGL 394
Query: 304 KH--------YGCMVDLLGRAGRLKEA 322
+ + ++D+ + G L++A
Sbjct: 395 LNRKSSNEFIHNSLMDMYVKCGDLRDA 421
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 113/230 (49%), Gaps = 11/230 (4%)
Query: 105 SSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFE 164
+S+V+ Y K G + A +FG R + +N +I+G+V NG A++ + EMRA G
Sbjct: 100 TSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGIL 158
Query: 165 PDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLV 224
PD++T S+L + L D K++H + + +V SGLV Y+K + +A+ V
Sbjct: 159 PDKYTFPSLLKGSDAMELSDV-KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKV 217
Query: 225 FEGFTQR-NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGL 283
F+ R + WNA+++G++ + + L F +M + T +VLSA G
Sbjct: 218 FDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGD 277
Query: 284 LSEALEVISKMEAYAIEMG----IKHYGCMVDLLGRAGRLKEAYDLIKRM 329
+ + A++ G I ++D+ G++ L+EA + + M
Sbjct: 278 IDNGRSI----HGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAM 323
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 76/138 (55%), Gaps = 11/138 (7%)
Query: 169 TVVSVLSACAQLGLLDAGKQIH-HMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEG 227
T ++ L CAQ +G+QIH M+ L +P + LV+MYAKCG + A LVF G
Sbjct: 62 TCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG 121
Query: 228 FTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEA 287
++R++ +NA+ISGF +NG + +E + M I PD TF ++L S+A
Sbjct: 122 -SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-------SDA 173
Query: 288 LEV--ISKMEAYAIEMGI 303
+E+ + K+ A ++G
Sbjct: 174 MELSDVKKVHGLAFKLGF 191
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/311 (37%), Positives = 178/311 (57%), Gaps = 9/311 (2%)
Query: 100 NCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMR 159
+ FV SS+V Y K G + A +F +P R++ W+ M+ GY Q G E AL F+E
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209
Query: 160 AEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLV 219
E ++++ SV+S CA LL+ G+QIH + + FV S LV +Y+KCG
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 220 NARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA 279
A VF +N+ WNAM+ +A + ++V+E F RM+ ++P+ ITFL VL+AC+
Sbjct: 270 GAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACS 329
Query: 280 HGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLG 339
H GL+ E +M+ IE KHY +VD+LGRAGRL+EA ++I MP++P E+V G
Sbjct: 330 HAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWG 389
Query: 340 AMLGACRTHSDMKM----AEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGI 395
A+L +C H + ++ A++V +L +S ++ LSN YAA ++E A K R +
Sbjct: 390 ALLTSCTVHKNTELAAFAADKVFELGPVSS-----GMHISLSNAYAADGRFEDAAKARKL 444
Query: 396 MVDGESEKIAG 406
+ D +K G
Sbjct: 445 LRDRGEKKETG 455
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 119/223 (53%), Gaps = 6/223 (2%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
+V ++++ Y + G++ A +F+EMP + VTWS M+ G+A+ G+ A LF EA
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209
Query: 65 HELKGV--VTWTVMVDGYARKGEMEAAREVFEL----MPERNCFVWSSMVSGYCKKGSVA 118
E V +++ ++ A +E R++ L + + FV SS+VS Y K G
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 119 EAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACA 178
A +F +PV++L IWN M+ Y Q+ ++ ++ F+ M+ G +P+ T ++VL+AC+
Sbjct: 270 GAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACS 329
Query: 179 QLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA 221
GL+D G+ ++ R+ + LVDM + G L A
Sbjct: 330 HAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEA 372
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 125/258 (48%), Gaps = 1/258 (0%)
Query: 102 FVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAE 161
V +++++ Y K ++ F P +S W+++I+ + QN +L+ ++M A
Sbjct: 51 LVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAG 110
Query: 162 GFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA 221
PD+ + S +CA L D G+ +H + + FV S LVDMYAKCG++V A
Sbjct: 111 NLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYA 170
Query: 222 RLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHG 281
R +F+ QRN+ W+ M+ G+A G+ E L F N+ + +F +V+S CA+
Sbjct: 171 RKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANS 230
Query: 282 GLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAM 341
LL ++ + + +V L + G + AY + +P++ N + AM
Sbjct: 231 TLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVK-NLGIWNAM 289
Query: 342 LGACRTHSDMKMAEQVIK 359
L A HS + ++ K
Sbjct: 290 LKAYAQHSHTQKVIELFK 307
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 202 bits (513), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 137/413 (33%), Positives = 214/413 (51%), Gaps = 21/413 (5%)
Query: 9 WNAMISG-----YMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEA 63
WN IS Y N + A VF+EMP + W+ ++ F++N A LF A
Sbjct: 196 WNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLF-YA 254
Query: 64 PHELKGVV----TWTVMVDGYARKGEMEAAREVF-ELMPE---RNCFVWSSMVSGYCKKG 115
H KG+V T+ ++ ++ +E+ +L+ N V SS++ Y K G
Sbjct: 255 MHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCG 314
Query: 116 SVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLS 175
SV EA +F + ++ W+ ++ GY QNG E+A++ F EM E D + +VL
Sbjct: 315 SVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLK 370
Query: 176 ACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICC 235
ACA L + GK+IH + N V S L+D+Y K G + +A V+ + RN+
Sbjct: 371 ACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMIT 430
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM- 294
WNAM+S A NG+ E + FF M I+PD I+F+ +L+AC H G++ E M
Sbjct: 431 WNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMA 490
Query: 295 EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDM-KM 353
++Y I+ G +HY CM+DLLGRAG +EA +L++R + ++ G +LG C ++D ++
Sbjct: 491 KSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRV 550
Query: 354 AEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
AE++ K + S+ VLLSN+Y A + A +R +MV K G
Sbjct: 551 AERIAKRMMELEPKYHMSY-VLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVG 602
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 161/357 (45%), Gaps = 29/357 (8%)
Query: 3 ERNVVTWNAMISGYMRNGD-MESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFD 61
+RNV N+++S Y + G M VF+ K ++W+ M+ G+ + A +F
Sbjct: 95 DRNV--GNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFV 152
Query: 62 EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER-------------NCFVWSSMV 108
E +V++ + + + ++A E+ E+ R N F+ S++
Sbjct: 153 E-------MVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLA 205
Query: 109 SGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEM-RAEGFEPDE 167
Y +A +F +P + W +++ + +N E AL F M R +G PD
Sbjct: 206 YLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDG 265
Query: 168 FTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEG 227
T +VL+AC L L GK+IH + + N V S L+DMY KCG + AR VF G
Sbjct: 266 STFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNG 325
Query: 228 FTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEA 287
+++N W+A++ G+ NG+ + +E F ME D F TVL ACA +
Sbjct: 326 MSKKNSVSWSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLG 381
Query: 288 LEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGA 344
E+ + + ++DL G++G + A + +M + N AML A
Sbjct: 382 KEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIR-NMITWNAMLSA 437
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 124/257 (48%), Gaps = 10/257 (3%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
NVV ++++ Y + G + A VF M K V+WS ++GG+ +NG+ A +F E
Sbjct: 299 NVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM- 357
Query: 65 HELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCF----VWSSMVSGYCKKGSVAEA 120
E K + + ++ A + +E+ R CF V S+++ Y K G + A
Sbjct: 358 -EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSA 416
Query: 121 ETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQL 180
++ ++ +R++ WN M++ QNG GE A+ F +M +G +PD + +++L+AC
Sbjct: 417 SRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHT 476
Query: 181 GLLDAGKQIHHMIEHKRLTVNPFV--LSGLVDMYAKCGDLVNARLVFEGFTQRN-ICCWN 237
G++D G+ + ++ K + P S ++D+ + G A + E RN W
Sbjct: 477 GMVDEGRN-YFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWG 535
Query: 238 AMISGFAINGKCREVLE 254
++ A N V E
Sbjct: 536 VLLGPCAANADASRVAE 552
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 133/267 (49%), Gaps = 5/267 (1%)
Query: 95 LMPERNCFVWSSMVSGYCKKG-SVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQ 153
L +RN V +S++S Y K G + E +F V+ W +M++GYV +AL+
Sbjct: 92 LETDRN--VGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALE 149
Query: 154 AFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYA 213
F EM + G + +EFT+ S + AC++LG + G+ H ++ N F+ S L +Y
Sbjct: 150 VFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYG 209
Query: 214 KCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMEN-LNIRPDAITFL 272
+ V+AR VF+ + ++ CW A++S F+ N E L F M + PD TF
Sbjct: 210 VNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFG 269
Query: 273 TVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME 332
TVL+AC + L + E+ K+ I + ++D+ G+ G ++EA + M +
Sbjct: 270 TVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMS-K 328
Query: 333 PNETVLGAMLGACRTHSDMKMAEQVIK 359
N A+LG + + + A ++ +
Sbjct: 329 KNSVSWSALLGGYCQNGEHEKAIEIFR 355
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/418 (32%), Positives = 211/418 (50%), Gaps = 21/418 (5%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDT---ATARRLFD 61
NV NA+++ Y G + +F MP V+W+ +IG AR+ + A L
Sbjct: 449 NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNA 508
Query: 62 EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERN----CFVWSSMVSGYCKKGSV 117
+ + +T++ ++ + E +++ L + N +++++ Y K G +
Sbjct: 509 QRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEM 568
Query: 118 AEAETIFGRIPVRSLEI-WNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
E IF R+ R + WN+MI+GY+ N +AL M G D F +VLSA
Sbjct: 569 DGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSA 628
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
A + L+ G ++H L + V S LVDMY+KCG L A F RN W
Sbjct: 629 FASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSW 688
Query: 237 NAMISGFAINGKCREVLEFFGRME-NLNIRPDAITFLTVLSACAHGGLLSEALEVISKM- 294
N+MISG+A +G+ E L+ F M+ + PD +TF+ VLSAC+H GLL E + M
Sbjct: 689 NSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMS 748
Query: 295 EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGAC------RTH 348
++Y + I+H+ CM D+LGRAG L + D I++MPM+PN + +LGAC +
Sbjct: 749 DSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAE 808
Query: 349 SDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
K AE + +L N++ + VLL N+YAA +WE K R M D + +K AG
Sbjct: 809 LGKKAAEMLFQLEPENAV-----NYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAG 861
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 192/432 (44%), Gaps = 50/432 (11%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
+++V N +I+ Y+ GD SA VF+EMP + V+W+ ++ G++RNG+ E
Sbjct: 33 DKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE-------HKE 85
Query: 63 APHELKGVVTWTVMVDGYARKGEMEAAREV---------------FELMPERNCFVWSSM 107
A L+ +V + + YA + A +E+ F+L + V + +
Sbjct: 86 ALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVL 145
Query: 108 VSGYCK-KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
+S Y K GSV A FG I V++ WN++I+ Y Q G A + F M+ +G P
Sbjct: 146 ISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPT 205
Query: 167 EFTVVSVLSACAQLGLLDAG--KQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLV 224
E+T S+++ L D +QI I+ L + FV SGLV +AK G L AR V
Sbjct: 206 EYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKV 265
Query: 225 FEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMEN-LNIRPDAITFLTVLSACAHGGL 283
F RN N ++ G E + F M + +++ P+ +++ +LS+ L
Sbjct: 266 FNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSL 323
Query: 284 LSE-ALEVISKMEAYAIEMGIKHY-----GCMVDLLGRAGRLKEA----YDLIKRMPMEP 333
E L+ ++ + I G+ + +V++ + G + +A Y + + +
Sbjct: 324 AEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSW 383
Query: 334 NETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYA-ASEKWEKAEKM 392
N + G C + + I S T L+S++ + AS KW K
Sbjct: 384 NSMITGLDQNGCFIEAVERYKSMRRHDILPGSFT-------LISSLSSCASLKWAKL--- 433
Query: 393 RGIMVDGESEKI 404
G + GES K+
Sbjct: 434 -GQQIHGESLKL 444
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 132/326 (40%), Gaps = 87/326 (26%)
Query: 4 RNVVTWNAMISGYMRNGDMESASLVFEEMP------------------------------ 33
+N V+WN++IS Y + GD SA +F M
Sbjct: 169 KNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLE 228
Query: 34 ------GKTGV-----TWSQMIGGFARNGDTATARRLFDEAPHELKGVVTWTVMVDGYAR 82
K+G+ S ++ FA++G + AR++F++ E + VT ++ G R
Sbjct: 229 QIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQM--ETRNAVTLNGLMVGLVR 286
Query: 83 KGEMEAAREVF-------ELMPERNCFVWSS----------------------------- 106
+ E A ++F ++ PE + SS
Sbjct: 287 QKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVD 346
Query: 107 --------MVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEM 158
+V+ Y K GS+A+A +F + + WN+MI G QNG A++ ++ M
Sbjct: 347 FMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSM 406
Query: 159 RAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDL 218
R P FT++S LS+CA L G+QIH + +N V + L+ +YA+ G L
Sbjct: 407 RRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYL 466
Query: 219 VNARLVFEGFTQRNICCWNAMISGFA 244
R +F + + WN++I A
Sbjct: 467 NECRKIFSSMPEHDQVSWNSIIGALA 492
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 132/306 (43%), Gaps = 49/306 (16%)
Query: 4 RNVVTWNAMISGYMRNGDMESA-SLV-FEEMPGK--TGVTWSQMIGGFARNGDTATARRL 59
R+ VTWN+MISGY+ N + A LV F G+ ++ ++ FA AT R
Sbjct: 582 RDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFA---SVATLERG 638
Query: 60 FDEAPHELKG-----VVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKK 114
+ ++ VV + +VD Y++ G ++ A F MP RN + W+SM+SGY +
Sbjct: 639 MEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARH 698
Query: 115 GSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEG-FEPDEFTVVSV 173
G GE AL+ FE M+ +G PD T V V
Sbjct: 699 GQ-------------------------------GEEALKLFETMKLDGQTPPDHVTFVGV 727
Query: 174 LSACAQLGLLDAG-KQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQR- 231
LSAC+ GLL+ G K M + L S + D+ + G+L E +
Sbjct: 728 LSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKP 787
Query: 232 NICCWNAMISGFA-INGKCREVLEFFGRMENLNIRP-DAITFLTVLSACAHGGLLSEALE 289
N+ W ++ NG+ E+ + M + P +A+ ++ + + A GG + ++
Sbjct: 788 NVLIWRTVLGACCRANGRKAELGKKAAEML-FQLEPENAVNYVLLGNMYAAGGRWEDLVK 846
Query: 290 VISKME 295
KM+
Sbjct: 847 ARKKMK 852
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 98/230 (42%), Gaps = 41/230 (17%)
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ 230
+S + +C +G A + H + RL + ++ + L++ Y + GD V+AR VF+
Sbjct: 7 LSFVQSC--VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 231 RNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA----------- 279
RN W ++SG++ NG+ +E L F M I + F++VL AC
Sbjct: 65 RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGR 124
Query: 280 --HGGLLSEALEVISKMEAYAIEMGIKHYG---------------------CMVDLLGRA 316
HG + + V + + I M K G ++ + +A
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184
Query: 317 GRLKEAYDLIKRMPME---PNETVLGAML-GACR-THSDMKMAEQVIKLI 361
G + A+ + M + P E G+++ AC T D+++ EQ++ I
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTI 234
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 85/177 (48%), Gaps = 22/177 (12%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMP--GKT---GVTWSQMIGGFARNGDTAT 55
MP RN +WN+MISGY R+G E A +FE M G+T VT+ ++ + G
Sbjct: 680 MPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEE 739
Query: 56 ARRLFDEAPHELKGVVT----WTVMVDGYARKGEMEAAREVFELMPER-NCFVWSSMVSG 110
+ F E+ + G+ ++ M D R GE++ + E MP + N +W +++
Sbjct: 740 GFKHF-ESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGA 798
Query: 111 YCK-KGSVAE-----AETIFGRIPVRSLEIWNTMIAG--YVQNGFGERALQAFEEMR 159
C+ G AE AE +F P ++ N ++ G Y G E ++A ++M+
Sbjct: 799 CCRANGRKAELGKKAAEMLFQLEPENAV---NYVLLGNMYAAGGRWEDLVKARKKMK 852
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 214/410 (52%), Gaps = 18/410 (4%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE-- 62
NV +A++ Y++ G A LV + + K V + +I G+++ G+ A + F
Sbjct: 200 NVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSML 259
Query: 63 ----APHELKGVVTWTVMVDGYARKGEMEAAREVFELMP----ERNCFVWSSMVSGYCKK 114
P+E T+ ++ ++ + + LM E +S+++ Y +
Sbjct: 260 VEKVQPNE----YTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRC 315
Query: 115 GSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVL 174
V ++ +F I + W ++I+G VQNG E AL F +M + +P+ FT+ S L
Sbjct: 316 SLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSAL 375
Query: 175 SACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNIC 234
C+ L + + G+QIH ++ + + SGL+D+Y KCG ARLVF+ ++ ++
Sbjct: 376 RGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVI 435
Query: 235 CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM 294
N MI +A NG RE L+ F RM NL ++P+ +T L+VL AC + L+ E E+
Sbjct: 436 SLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSF 495
Query: 295 EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMA 354
I + HY CMVDLLGRAGRL+EA +++ + P+ + +L AC+ H ++MA
Sbjct: 496 RKDKIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMA 554
Query: 355 EQVIKLIGTNSITRADSHN-VLLSNIYAASEKWEKAEKMRGIMVDGESEK 403
E++ + I I D +L+SN+YA++ KW + +M+ M D + +K
Sbjct: 555 ERITRKIL--EIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKK 602
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/434 (23%), Positives = 186/434 (42%), Gaps = 55/434 (12%)
Query: 7 VTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHE 66
++ + ++ ++ GD++ A VF+ M + VTW+ +I ++ R EA
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKH-------RRSKEAVEM 152
Query: 67 LKGVVTWTVMVDGYARKG----------EMEAARE----VFELMPERNCFVWSSMVSGYC 112
+ ++T V+ D Y E EA R V + N FV S++V Y
Sbjct: 153 YRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYV 212
Query: 113 KKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVS 172
K G EA+ + R+ + + + +I GY Q G A++AF+ M E +P+E+T S
Sbjct: 213 KFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYAS 272
Query: 173 VLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRN 232
VL +C L + GK IH ++ + L+ MY +C + ++ VF+ N
Sbjct: 273 VLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPN 332
Query: 233 ICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVIS 292
W ++ISG NG+ L F +M +I+P++ T + L C++ + E ++
Sbjct: 333 QVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHG 392
Query: 293 KMEAYAIEMGIKHYGCMVDLLGRAG-----RL--------------------------KE 321
+ Y + ++DL G+ G RL +E
Sbjct: 393 IVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGRE 452
Query: 322 AYDLIKRM---PMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSN 378
A DL +RM ++PN+ + ++L AC ++ ++ + I + H + +
Sbjct: 453 ALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVD 512
Query: 379 IYAASEKWEKAEKM 392
+ + + E+AE +
Sbjct: 513 LLGRAGRLEEAEML 526
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/402 (30%), Positives = 205/402 (50%), Gaps = 24/402 (5%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE------A 63
N++ + Y G+M+ +FE M + V+W+ +I + R G A F +
Sbjct: 248 NSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVP 307
Query: 64 PHELKGVVTWTVMVDGYARKGEMEAARE----VFELMPERNCFVWSSMVSGYCKKGSVAE 119
P+E T+ M A + + V L + V +SM+ Y G++
Sbjct: 308 PNEQ----TFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVS 363
Query: 120 AETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQ 179
A +F + R + W+T+I GY Q GFGE + F MR G +P +F + S+LS
Sbjct: 364 ASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGN 423
Query: 180 LGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAM 239
+ +++ G+Q+H + L N V S L++MY+KCG + A ++F + +I AM
Sbjct: 424 MAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAM 483
Query: 240 ISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYA 298
I+G+A +GK +E ++ F + + RPD++TF++VL+AC H G L + M E Y
Sbjct: 484 INGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYN 543
Query: 299 IEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDM----KMA 354
+ +HYGCMVDLL RAGRL +A +I M + ++ V +L AC+ D+ + A
Sbjct: 544 MRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAA 603
Query: 355 EQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIM 396
E++++L T + V L+NIY+++ E+A +R M
Sbjct: 604 ERILELDPTCATAL-----VTLANIYSSTGNLEEAANVRKNM 640
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 151/324 (46%), Gaps = 6/324 (1%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
+V ++++ Y R G ++ + VF EMP + VTW+ +I G G F E
Sbjct: 142 SVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMS 201
Query: 65 H--ELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKGSVA 118
EL T+ + + A +++ + + + R V +S+ + Y + G +
Sbjct: 202 RSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQ 261
Query: 119 EAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACA 178
+ +F + R + W ++I Y + G +A++ F +MR P+E T S+ SACA
Sbjct: 262 DGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACA 321
Query: 179 QLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNA 238
L L G+Q+H + L + V + ++ MY+ CG+LV+A ++F+G R+I W+
Sbjct: 322 SLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWST 381
Query: 239 MISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYA 298
+I G+ G E ++F M +P ++LS + ++ +V + +
Sbjct: 382 IIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFG 441
Query: 299 IEMGIKHYGCMVDLLGRAGRLKEA 322
+E ++++ + G +KEA
Sbjct: 442 LEQNSTVRSSLINMYSKCGSIKEA 465
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 132/279 (47%), Gaps = 10/279 (3%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGF--ARNGDTA----TARRLFDEA 63
N+ + + G++ +A VF++MP V+W+ +I + A N D A +A R+ D A
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 64 PHELKGVVTWTVMVDGYARK---GEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEA 120
V++ + G + GE A V + + +V SS++ Y + G + ++
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLS-SVYVGSSLLDMYKRVGKIDKS 162
Query: 121 ETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQL 180
+F +P R+ W +I G V G + L F EM D +T L ACA L
Sbjct: 163 CRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGL 222
Query: 181 GLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMI 240
+ GK IH + + V + L MY +CG++ + +FE ++R++ W ++I
Sbjct: 223 RQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLI 282
Query: 241 SGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA 279
+ G+ + +E F +M N + P+ TF ++ SACA
Sbjct: 283 VAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACA 321
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 207/412 (50%), Gaps = 51/412 (12%)
Query: 9 WNAMISGYMRNGDMESASLVFEEM------PGKTGVTWSQMIGGFARNGDTATARRLFDE 62
W AM GY RNG A +V+ +M PG + S + D R + +
Sbjct: 204 WAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSI--SVALKACVDLKDLRVGRGIHAQ 261
Query: 63 APHELKGV--VTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEA 120
+ V V + V++ Y G + AR+VF+ M ERN W+S++S KK
Sbjct: 262 IVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKK------ 315
Query: 121 ETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQL 180
VR E++N F +M+ E T+ ++L AC+++
Sbjct: 316 --------VRVHEMFNL-----------------FRKMQEEMIGFSWATLTTILPACSRV 350
Query: 181 GLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMI 240
L GK+IH I + + +L+ L+DMY KCG++ +R VF+ +++ WN M+
Sbjct: 351 AALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIML 410
Query: 241 SGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA-YAI 299
+ +AING EV+ F M + PD ITF+ +LS C+ GL L + +M+ + +
Sbjct: 411 NCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRV 470
Query: 300 EMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIK 359
++HY C+VD+LGRAG++KEA +I+ MP +P+ ++ G++L +CR H ++ + E
Sbjct: 471 SPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGE---- 526
Query: 360 LIGTNSITRADSHN----VLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
I + + HN V++SNIYA ++ W+ +K+R +M +K AGC
Sbjct: 527 -IAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGC 577
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 115/250 (46%), Gaps = 10/250 (4%)
Query: 7 VTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHE 66
V +N ++ YM +G + A VF+ M + VTW+ +I ++ LF + E
Sbjct: 272 VVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEE 331
Query: 67 LKGV--VTWTVMVDGYARKGEMEAAREVF-ELMPER---NCFVWSSMVSGYCKKGSVAEA 120
+ G T T ++ +R + +E+ +++ + + + +S++ Y K G V +
Sbjct: 332 MIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYS 391
Query: 121 ETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQL 180
+F + + L WN M+ Y NG E + FE M G PD T V++LS C+
Sbjct: 392 RRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDT 451
Query: 181 GLLDAGKQIHHMIEHKRLTVNPFV--LSGLVDMYAKCGDLVNARLVFEGFT-QRNICCWN 237
GL + G + ++ V+P + + LVD+ + G + A V E + + W
Sbjct: 452 GLTEYGLSLFERMK-TEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWG 510
Query: 238 AMISGFAING 247
++++ ++G
Sbjct: 511 SLLNSCRLHG 520
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 135/458 (29%), Positives = 224/458 (48%), Gaps = 56/458 (12%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEM-----------------------PGKTG 37
M E++VVTWN +ISGY++ G +E A + + M K G
Sbjct: 335 MFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLG 394
Query: 38 ----------------VTWSQMIGGFARNGDTATARRLFDEAPHELKGVVTWTVMVDGYA 81
V S ++ +A+ G A+++FD K ++ W ++ YA
Sbjct: 395 KEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVE--KDLILWNTLLAAYA 452
Query: 82 RKG-EMEAAREVFELMPE---RNCFVWSSMVSGYCKKGSVAEAETIF------GRIPVRS 131
G EA R + + E N W+ ++ + G V EA+ +F G IP +
Sbjct: 453 ESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIP--N 510
Query: 132 LEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIH- 190
L W TM+ G VQNG E A+ +M+ G P+ F++ LSACA L L G+ IH
Sbjct: 511 LISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHG 570
Query: 191 HMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCR 250
++I + + + + + LVDMYAKCGD+ A VF + NAMIS +A+ G +
Sbjct: 571 YIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLK 630
Query: 251 EVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYAIEMGIKHYGCM 309
E + + +E + ++PD IT VLSAC H G +++A+E+ + + +++ ++HYG M
Sbjct: 631 EAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLM 690
Query: 310 VDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRA 369
VDLL AG ++A LI+ MP +P+ ++ +++ +C ++ + + + + S
Sbjct: 691 VDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKL-LESEPEN 749
Query: 370 DSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
+ V +SN YA W++ KMR +M +K GC
Sbjct: 750 SGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGC 787
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 189/410 (46%), Gaps = 53/410 (12%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATA 56
+P+RN V WNA++ GY++NG E A +F +M + T VT S + A G
Sbjct: 234 IPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEG 293
Query: 57 RRLFDEA---PHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCK 113
++ A EL ++ T +++ Y + G +E A VF+ M E++ W+ ++SG
Sbjct: 294 KQSHAIAIVNGMELDNILG-TSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISG--- 349
Query: 114 KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSV 173
YVQ G E A+ + MR E + D T+ ++
Sbjct: 350 ----------------------------YVQQGLVEDAIYMCQLMRLEKLKYDCVTLATL 381
Query: 174 LSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNI 233
+SA A+ L GK++ + + S ++DMYAKCG +V+A+ VF+ ++++
Sbjct: 382 MSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDL 441
Query: 234 CCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISK 293
WN +++ +A +G E L F M+ + P+ IT+ ++ + G + EA ++ +
Sbjct: 442 ILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQ 501
Query: 294 MEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMP---MEPNETVLGAMLGACRTHSD 350
M++ I + + M++ + + G +EA +++M + PN + L AC +
Sbjct: 502 MQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLAS 561
Query: 351 MKMAEQVIKLIGTNSITRADSHNVLLS------NIYAASEKWEKAEKMRG 394
+ + + I R H+ L+S ++YA KAEK+ G
Sbjct: 562 LHIGRTI-----HGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFG 606
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 155/337 (45%), Gaps = 30/337 (8%)
Query: 4 RNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE- 62
RN ++ Y + +E A ++F ++ + +W+ +IG R G A F E
Sbjct: 105 RNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEM 164
Query: 63 -----------APHELK--GVVTWTVM---VDGYARKGEMEAAREVFELMPERNC-FVWS 105
P+ K G + W+ V GY K +E +C FV S
Sbjct: 165 LENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLE------------DCVFVAS 212
Query: 106 SMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEP 165
S+ Y K G + +A +F IP R+ WN ++ GYVQNG E A++ F +MR +G EP
Sbjct: 213 SLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEP 272
Query: 166 DEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVF 225
TV + LSA A +G ++ GKQ H + + ++ + + L++ Y K G + A +VF
Sbjct: 273 TRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVF 332
Query: 226 EGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLS 285
+ ++++ WN +ISG+ G + + M ++ D +T T++SA A L
Sbjct: 333 DRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLK 392
Query: 286 EALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEA 322
EV ++ E I ++D+ + G + +A
Sbjct: 393 LGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDA 429
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 143/425 (33%), Positives = 220/425 (51%), Gaps = 25/425 (5%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
+P ++VVT+NA ISG M NG M VF M + + + N TA A L
Sbjct: 190 VPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVT---FVNAITACASLLN 246
Query: 61 DEAPHELKGVV----------TWTVMVDGYARKGEMEAAREVF-ELMPERNCFVWSSMVS 109
+ +L G+V T ++D Y++ ++A VF EL RN W+S++S
Sbjct: 247 LQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVIS 306
Query: 110 GYCKKGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEP 165
G G A +F ++ L+ WN++I+G+ Q G A + FE M + P
Sbjct: 307 GMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVP 366
Query: 166 DEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVF 225
+ S+LSAC+ + L GK+IH + + FVL+ L+DMY KCG AR +F
Sbjct: 367 SLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIF 426
Query: 226 EGF--TQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGL 283
+ F ++ WN MISG+ +G+C +E F + + P TF VLSAC+H G
Sbjct: 427 DRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGN 486
Query: 284 LSEALEVISKM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAML 342
+ + ++ M E Y + +H GCM+DLLGR+GRL+EA ++I +M EP+ +V ++L
Sbjct: 487 VEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM-SEPSSSVYSSLL 545
Query: 343 GACRTHSDMKMAEQ-VIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGES 401
G+CR H D + E+ +KL A V+LS+IYAA E+WE E +R ++ +
Sbjct: 546 GSCRQHLDPVLGEEAAMKLAELEPENPAPF--VILSSIYAALERWEDVESIRQVIDQKQL 603
Query: 402 EKIAG 406
K+ G
Sbjct: 604 VKLPG 608
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 159/315 (50%), Gaps = 10/315 (3%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
+V T A++S YM+ + A V +EMP + + + + G NG A R+F +A
Sbjct: 65 DVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDAR 124
Query: 65 HELKGVVTWTVMVDGYARKGEMEAAREVFELMP----ERNCFVWSSMVSGYCKKGSVAEA 120
G+ + TV G++E ++ L E +V +S+VS Y + G A
Sbjct: 125 VSGSGMNSVTV-ASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLA 183
Query: 121 ETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRA-EGFEPDEFTVVSVLSACAQ 179
+F ++P +S+ +N I+G ++NG F MR EP++ T V+ ++ACA
Sbjct: 184 ARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACAS 243
Query: 180 LGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ-RNICCWNA 238
L L G+Q+H ++ K V + L+DMY+KC +A +VF RN+ WN+
Sbjct: 244 LLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNS 303
Query: 239 MISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYA 298
+ISG ING+ +E F ++++ ++PD+ T+ +++S + G + EA + +M +
Sbjct: 304 VISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVV 363
Query: 299 IEMGIKHYGCMVDLL 313
+ +K C+ LL
Sbjct: 364 MVPSLK---CLTSLL 375
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 7/168 (4%)
Query: 165 PDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLV 224
P++FT +L +CA+LG + G+ +H + V+ F + LV MY K + +A V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 225 FEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA--HGG 282
+ +R I NA +SG NG CR+ FG +++T +VL C GG
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGG 148
Query: 283 LLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMP 330
+ L + S EM + +V + R G A + +++P
Sbjct: 149 MQLHCLAMKS-----GFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVP 191
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 124/398 (31%), Positives = 205/398 (51%), Gaps = 10/398 (2%)
Query: 19 NGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTAT-ARRLFDE---APHELKGVVTWT 74
+G ++ VF+ M + ++W+ +I G+ +N + AT A LF E H T++
Sbjct: 318 DGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFS 377
Query: 75 VMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKGSVAEAETIFGRIPVR 130
+ ++V +R N V +S++S + K + +A+ F + +
Sbjct: 378 SAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK 437
Query: 131 SLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIH 190
+L +NT + G +N E+A + E+ FT S+LS A +G + G+QIH
Sbjct: 438 NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIH 497
Query: 191 HMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCR 250
+ L+ N V + L+ MY+KCG + A VF RN+ W +MI+GFA +G
Sbjct: 498 SQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAI 557
Query: 251 EVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYAIEMGIKHYGCM 309
VLE F +M ++P+ +T++ +LSAC+H GL+SE + M E + I+ ++HY CM
Sbjct: 558 RVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACM 617
Query: 310 VDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRA 369
VDLL RAG L +A++ I MP + + V LGACR HS+ ++ + + I
Sbjct: 618 VDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEP 677
Query: 370 DSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
++ + LSNIYA + KWE++ +MR M + K GC
Sbjct: 678 AAY-IQLSNIYACAGKWEESTEMRRKMKERNLVKEGGC 714
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 169/381 (44%), Gaps = 32/381 (8%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMP--GKTGV-TWSQMIGGFARNGDTATARRL 59
E + V +N++IS Y ++GD A VFE M GK V +WS M+ + NG A ++
Sbjct: 94 EPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKV 153
Query: 60 FDE------APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCF-----VWSSMV 108
F E P++ +T ++ + + R + + F V S++
Sbjct: 154 FVEFLELGLVPNDY----CYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLI 209
Query: 109 SGYCK-KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDE 167
+ K + S A +F ++ ++ W MI +Q GF A++ F +M GFE D+
Sbjct: 210 DMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDK 269
Query: 168 FTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKC---GDLVNARLV 224
FT+ SV SACA+L L GKQ+H L + V LVDMYAKC G + + R V
Sbjct: 270 FTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKV 327
Query: 225 FEGFTQRNICCWNAMISGFAINGK-CREVLEFFGRM-ENLNIRPDAITFLTVLSACAHGG 282
F+ ++ W A+I+G+ N E + F M ++ P+ TF + AC +
Sbjct: 328 FDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLS 387
Query: 283 LLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAML 342
+V+ + + ++ + ++ R+++A + + E N L
Sbjct: 388 DPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLS-EKNLVSYNTFL 446
Query: 343 -GACRTHSDMKMAEQVIKLIG 362
G CR + EQ KL+
Sbjct: 447 DGTCRNLN----FEQAFKLLS 463
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 152/318 (47%), Gaps = 34/318 (10%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKG 69
N++IS ++++ ME A FE + K V+++ + G RN + A +L E G
Sbjct: 412 NSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELG 471
Query: 70 V--VTWTVMVDGYA-----RKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAET 122
V T+ ++ G A RKGE + +V +L N V ++++S Y K GS+ A
Sbjct: 472 VSAFTFASLLSGVANVGSIRKGE-QIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASR 530
Query: 123 IFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGL 182
+F + R++ W +MI G+ ++GF R L+ F +M EG +P+E T V++LSAC+ +GL
Sbjct: 531 VFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGL 590
Query: 183 LDAG-KQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT----QRNICCWN 237
+ G + + M E ++ + +VD+ + G L +A FE Q ++ W
Sbjct: 591 VSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDA---FEFINTMPFQADVLVWR 647
Query: 238 AMISGFAINGK-------CREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEV 290
+ ++ R++LE P A L+ + ACA G E+ E+
Sbjct: 648 TFLGACRVHSNTELGKLAARKILELDPN------EPAAYIQLSNIYACA--GKWEESTEM 699
Query: 291 ISKMEAYAIEMGIKHYGC 308
KM+ + +K GC
Sbjct: 700 RRKMKERNL---VKEGGC 714
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 125/279 (44%), Gaps = 23/279 (8%)
Query: 125 GRIPVRS-------LEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEP-DEFTVVSVLSA 176
++P++S + + + +I ++ G A+ A + M +G P D T S+L +
Sbjct: 12 AKLPIKSQPSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKS 71
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEG---FTQRNI 233
C + GK +H + + + + + L+ +Y+K GD A VFE F +R++
Sbjct: 72 CIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDV 131
Query: 234 CCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHG---GLLSEALEV 290
W+AM++ + NG+ + ++ F L + P+ + V+ AC++ G+ L
Sbjct: 132 VSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGF 191
Query: 291 ISKMEAYAIEMGIKHYGC-MVDLLGRA-GRLKEAYDLIKRMPMEPNETVLGAMLGACRTH 348
+ K + ++ + GC ++D+ + + AY + +M E N M+ C
Sbjct: 192 LMKTGHFESDVCV---GCSLIDMFVKGENSFENAYKVFDKMS-ELNVVTWTLMITRCM-- 245
Query: 349 SDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWE 387
M + I+ ++ +S LS++++A + E
Sbjct: 246 -QMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELE 283
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 124/391 (31%), Positives = 200/391 (51%), Gaps = 37/391 (9%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
E + +++I Y + G++ +A VF ++ + V ++ MI G+A N A L +
Sbjct: 149 ESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKD 208
Query: 63 APHELKG----VVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVA 118
+L G V+TW ++ G++ E E+ ELM C G
Sbjct: 209 M--KLLGIKPDVITWNALISGFSHMRNEEKVSEILELM---------------CLDGYKP 251
Query: 119 EAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACA 178
+ + W ++I+G V N E+A AF++M G P+ T++++L AC
Sbjct: 252 DVVS------------WTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACT 299
Query: 179 QLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNA 238
L + GK+IH L + FV S L+DMY KCG + A ++F ++ +N+
Sbjct: 300 TLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNS 359
Query: 239 MISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKME-AY 297
MI +A +G + +E F +ME + D +TF +L+AC+H GL + M+ Y
Sbjct: 360 MIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKY 419
Query: 298 AIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQV 357
I ++HY CMVDLLGRAG+L EAY++IK M MEP+ V GA+L ACR H +M++A
Sbjct: 420 RIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIA 479
Query: 358 IKLIGTNSITRADSHN-VLLSNIYAASEKWE 387
K + + +S N +LL+++YA + WE
Sbjct: 480 AKHLA--ELEPENSGNGLLLTSLYANAGSWE 508
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 134/258 (51%), Gaps = 3/258 (1%)
Query: 103 VWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEG 162
+ + +V+ Y + G V +A +F +P R + MI +NG+ + +L F EM +G
Sbjct: 53 IAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDG 112
Query: 163 FEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNAR 222
+ D F V S+L A L + GK IH ++ + F++S L+DMY+K G++ NAR
Sbjct: 113 LKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNAR 172
Query: 223 LVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGG 282
VF ++++ +NAMISG+A N + E L M+ L I+PD IT+ ++S +H
Sbjct: 173 KVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMR 232
Query: 283 LLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM---PMEPNETVLG 339
+ E++ M + + + ++ L + ++A+D K+M + PN +
Sbjct: 233 NEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATII 292
Query: 340 AMLGACRTHSDMKMAEQV 357
+L AC T + MK +++
Sbjct: 293 TLLPACTTLAYMKHGKEI 310
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 147/342 (42%), Gaps = 59/342 (17%)
Query: 12 MISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKGVV 71
+++ Y+ G + A VF+EMP + MIG ARNG + F E +
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKD----- 111
Query: 72 TWTVMVDGYARKGEMEAARE-------------VFELMPERNCFVWSSMVSGYCKKGSVA 118
+ +D + ++A+R V + E + F+ SS++ Y K G V
Sbjct: 112 --GLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVG 169
Query: 119 EAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACA 178
A +F + + L ++N MI+GY N + AL ++M+ G +PD T +++S
Sbjct: 170 NARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISG-- 227
Query: 179 QLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNA 238
H R N +S ++++ + +G+ + ++ W +
Sbjct: 228 --------------FSHMR---NEEKVSEILEL-----------MCLDGY-KPDVVSWTS 258
Query: 239 MISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYA 298
+ISG N + + + F +M + P++ T +T+L AC + E+ Y+
Sbjct: 259 IISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEI----HGYS 314
Query: 299 IEMGIKHYG----CMVDLLGRAGRLKEAYDLIKRMPMEPNET 336
+ G++ +G ++D+ G+ G + EA L ++ P + T
Sbjct: 315 VVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVT 356
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 198 bits (503), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 205/404 (50%), Gaps = 30/404 (7%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF--------D 61
N+++ Y + G + A VF + ++ ++W+ MI GF G + A F
Sbjct: 146 NSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIK 205
Query: 62 EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCF-------VWSSMVSGYCKK 114
E P E T T ++ + G + A +++ + R+ F + S+V Y K
Sbjct: 206 ERPDEF----TLTSLLKACSSTGMIYAGKQIHGFLV-RSGFHCPSSATITGSLVDLYVKC 260
Query: 115 GSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVL 174
G + A F +I +++ W+++I GY Q G A+ F+ ++ + D F + S++
Sbjct: 261 GYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSII 320
Query: 175 SACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNIC 234
A LL GKQ+ + + VL+ +VDMY KCG + A F +++
Sbjct: 321 GVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVI 380
Query: 235 CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISK- 293
W +I+G+ +G ++ + F M NI PD + +L VLSAC+H G++ E E+ SK
Sbjct: 381 SWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKL 440
Query: 294 MEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKM 353
+E + I+ ++HY C+VDLLGRAGRLKEA LI MP++PN + +L CR H D+++
Sbjct: 441 LETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIEL 500
Query: 354 AEQVIKLIGTNSITRADSHN----VLLSNIYAASEKWEKAEKMR 393
++V K+ + R D+ N V++SN+Y + W + R
Sbjct: 501 GKEVGKI-----LLRIDAKNPANYVMMSNLYGQAGYWNEQGNAR 539
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 211/450 (46%), Gaps = 71/450 (15%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEA- 63
N++T N +I Y + + A VF+ MP + V+WS ++ G NGD + LF E
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 99
Query: 64 -----PHELKGVVTWTVMVDGYARKGEMEAAREV--------FELMPERNCFVWSSMVSG 110
P+E T++ + +E ++ FE+M E V +S+V
Sbjct: 100 RQGIYPNEF----TFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVE----VGNSLVDM 151
Query: 111 YCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFE--PDEF 168
Y K G + EAE +F RI RSL WN MIAG+V G+G +AL F M+ + PDEF
Sbjct: 152 YSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEF 211
Query: 169 TVVSVLSACAQLGLLDAGKQIHHMIEHK--RLTVNPFVLSGLVDMYAKCGDLVNARLVFE 226
T+ S+L AC+ G++ AGKQIH + + + LVD+Y KCG L +AR F+
Sbjct: 212 TLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFD 271
Query: 227 GFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSE 286
++ + W+++I G+A G+ E + F R++ LN + D+ +++ A LL +
Sbjct: 272 QIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQ 331
Query: 287 ALEVISKMEAYAIEM--GIKH--YGCMVDLLGRAGRLKEA-------------------- 322
+M+A A+++ G++ +VD+ + G + EA
Sbjct: 332 G----KQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVIT 387
Query: 323 ---------------YDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVI-KLIGTNSI 366
Y+++ R +EP+E A+L AC +K E++ KL+ T+ I
Sbjct: 388 GYGKHGLGKKSVRIFYEML-RHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGI 446
Query: 367 TRADSHNVLLSNIYAASEKWEKAEKMRGIM 396
H + ++ + + ++A+ + M
Sbjct: 447 KPRVEHYACVVDLLGRAGRLKEAKHLIDTM 476
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 81/161 (50%)
Query: 169 TVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF 228
+VS+L C + GL D G Q+H + +N + L+DMY KC + + A VF+
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 229 TQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEAL 288
+RN+ W+A++SG +NG + L F M I P+ TF T L AC L + L
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 289 EVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM 329
++ EM ++ +VD+ + GR+ EA + +R+
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI 168
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 198 bits (503), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 219/416 (52%), Gaps = 23/416 (5%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARN--GDTAT-ARRLFD 61
++ N++ Y+ G A +F M K V+W+ MI G+ N D A R+ D
Sbjct: 331 DISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMD 390
Query: 62 E---APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERN----CFVWSSMVSGYCKK 114
+ P E +T ++ A G+++ E+ +L + V +++++ Y K
Sbjct: 391 QDSVKPDE----ITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKC 446
Query: 115 GSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVL 174
+ +A IF IP +++ W ++IAG N AL +M+ +P+ T+ + L
Sbjct: 447 KCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAAL 505
Query: 175 SACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNIC 234
+ACA++G L GK+IH + + ++ F+ + L+DMY +CG + A F ++++
Sbjct: 506 AACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVT 564
Query: 235 CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM 294
WN +++G++ G+ V+E F RM +RPD ITF+++L C+ ++ + L SKM
Sbjct: 565 SWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM 624
Query: 295 EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMA 354
E Y + +KHY C+VDLLGRAG L+EA+ I++MP+ P+ V GA+L ACR H + +
Sbjct: 625 EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLG 684
Query: 355 E---QVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
E Q I + S+ + +LL N+YA KW + K+R +M + AGC
Sbjct: 685 ELSAQHIFELDKKSV----GYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGC 736
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 172/331 (51%), Gaps = 15/331 (4%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
E ++ NA+I+ Y++ GD++SA L+F+ MP + ++W+ MI G+ NG LF
Sbjct: 228 ELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELF-- 285
Query: 63 APHELKGV------VTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYC 112
++G+ +T T ++ G+ R++ + + V +S+ Y
Sbjct: 286 --FAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYL 343
Query: 113 KKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVS 172
GS EAE +F R+ + + W TMI+GY N ++A+ + M + +PDE TV +
Sbjct: 344 NAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAA 403
Query: 173 VLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRN 232
VLSACA LG LD G ++H + RL V + L++MY+KC + A +F ++N
Sbjct: 404 VLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKN 463
Query: 233 ICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVIS 292
+ W ++I+G +N +C E L F +M+ + ++P+AIT L+ACA G L E+ +
Sbjct: 464 VISWTSIIAGLRLNNRCFEALIFLRQMK-MTLQPNAITLTAALAACARIGALMCGKEIHA 522
Query: 293 KMEAYAIEMGIKHYGCMVDLLGRAGRLKEAY 323
+ + + ++D+ R GR+ A+
Sbjct: 523 HVLRTGVGLDDFLPNALLDMYVRCGRMNTAW 553
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 159/341 (46%), Gaps = 33/341 (9%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEA---PHE 66
NA ++ ++R G++ A VF +M + +W+ ++GG+A+ G FDEA H
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQG-------YFDEAMCLYHR 185
Query: 67 L-------KGVVTWTVM------VDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCK 113
+ V T+ + + AR E+ V E + V +++++ Y K
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHV--HVVRYGYELDIDVVNALITMYVK 243
Query: 114 KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSV 173
G V A +F R+P R + WN MI+GY +NG L+ F MR +PD T+ SV
Sbjct: 244 CGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSV 303
Query: 174 LSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNI 233
+SAC LG G+ IH + V+ V + L MY G A +F +++I
Sbjct: 304 ISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDI 363
Query: 234 CCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISK 293
W MISG+ N + ++ + M+ +++PD IT VLSACA G L +E
Sbjct: 364 VSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVE---- 419
Query: 294 MEAYAIEMGIKHY----GCMVDLLGRAGRLKEAYDLIKRMP 330
+ AI+ + Y ++++ + + +A D+ +P
Sbjct: 420 LHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP 460
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 156/325 (48%), Gaps = 45/325 (13%)
Query: 105 SSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMR-AEGF 163
++ ++ + + G++ +A +FG++ R+L WN ++ GY + G+ + A+ + M G
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 164 EPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARL 223
+PD +T VL C + L GK++H + ++ V++ L+ MY KCGD+ +ARL
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 224 VFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGL 283
+F+ +R+I WNAMISG+ NG C E LE F M L++ PD +T +V+SAC L
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACE---L 309
Query: 284 LSEALEVISKMEAYAIEMG----IKHYGCMVDLLGRAGRLKEAYDLIKRM---------- 329
L + + + AY I G I + + AG +EA L RM
Sbjct: 310 LGDR-RLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTT 368
Query: 330 ------------------------PMEPNETVLGAMLGACRTHSDMKMAEQVIKL-IGTN 364
++P+E + A+L AC T D+ ++ KL I
Sbjct: 369 MISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKAR 428
Query: 365 SITRADSHNVLLSNIYAASEKWEKA 389
I+ N L+ N+Y+ + +KA
Sbjct: 429 LISYVIVANNLI-NMYSKCKCIDKA 452
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 137/476 (28%), Positives = 212/476 (44%), Gaps = 85/476 (17%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTW---------------- 40
M +++ V+WN MI Y ++G E A VF+ M K + VT
Sbjct: 212 MKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCL 271
Query: 41 -------------SQMIGGFARNGDTATARRLFDEAPHELKGVVTWTVMVDGYARKGEME 87
+ ++ ++R G +A RL+ A + +V T +V YA KG+M+
Sbjct: 272 VVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQD--SIVGLTSIVSCYAEKGDMD 329
Query: 88 AAREVFELMPE---------------------------------------RNCFVWSSMV 108
A F + V + ++
Sbjct: 330 IAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLI 389
Query: 109 SGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEG-FEPDE 167
+ Y K V +F ++ L WN++I+G VQ+G A + F +M G PD
Sbjct: 390 TMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDA 449
Query: 168 FTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEG 227
T+ S+L+ C+QL L+ GK++H FV + L+DMYAKCG+ V A VF+
Sbjct: 450 ITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKS 509
Query: 228 FTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEA 287
WN+MISG++++G L + M ++PD ITFL VLSAC HGG + E
Sbjct: 510 IKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEG 569
Query: 288 LEVISKM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACR 346
M + + I ++HY MV LLGRA EA LI +M ++P+ V GA+L AC
Sbjct: 570 KICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACI 629
Query: 347 THSDMKMAEQVIKLIGTNSITRADSHN----VLLSNIYAASEKWEKAEKMRGIMVD 398
H ++++ E V + + D N VL+SN+YA W+ ++R +M D
Sbjct: 630 IHRELEVGEYVAR-----KMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKD 680
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 96/180 (53%)
Query: 98 ERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEE 157
+R +V +S+++ Y KKG V A+ +F +P R +WN +I GY +NG+ A + F
Sbjct: 82 DRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIV 141
Query: 158 MRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGD 217
M +GF P T+V++L C Q G + G+ +H + L ++ V + L+ Y+KC +
Sbjct: 142 MLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAE 201
Query: 218 LVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSA 277
L +A ++F ++ WN MI ++ +G E + F M N+ +T + +LSA
Sbjct: 202 LGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA 261
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 150/307 (48%), Gaps = 16/307 (5%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
+R V ++++ Y++ G + SA ++F+EMP + V W+ +I G++RNG A +LF
Sbjct: 82 DRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIV 141
Query: 63 APHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMP----ERNCFVWSSMVSGYCKKGS 116
+ T ++ + G + R V + E + V ++++S Y K
Sbjct: 142 MLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAE 201
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+ AE +F + +S WNTMI Y Q+G E A+ F+ M + E T++++LSA
Sbjct: 202 LGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA 261
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
+ + +H ++ + + V++ LV Y++CG LV+A ++ Q +I
Sbjct: 262 HV------SHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGL 315
Query: 237 NAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA 296
+++S +A G + +F + L ++ DA+ + +L HG S +++ +
Sbjct: 316 TSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGIL----HGCKKSSHIDIGMSLHG 371
Query: 297 YAIEMGI 303
YAI+ G+
Sbjct: 372 YAIKSGL 378
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 142/353 (40%), Gaps = 75/353 (21%)
Query: 1 MPERNVVTWNAMISGYMRNGD----------------MESASLVFEEMP----------- 33
MPER+ V WNA+I GY RNG SA+ + +P
Sbjct: 111 MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 170
Query: 34 -------GKTGVTWSQ-----MIGGFARNGDTATARRLFDEAPHELKGVVTWTVMVDGYA 81
K+G+ +I +++ + +A LF E K V+W M+ Y+
Sbjct: 171 RSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKD--KSTVSWNTMIGAYS 228
Query: 82 RKGEMEAAREVFELMPERN----------------------CF-----------VWSSMV 108
+ G E A VF+ M E+N C V +S+V
Sbjct: 229 QSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLV 288
Query: 109 SGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEF 168
Y + G + AE ++ S+ ++++ Y + G + A+ F + R + D
Sbjct: 289 CAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAV 348
Query: 169 TVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF 228
+V +L C + +D G +H L V++GL+ MY+K D+ +FE
Sbjct: 349 ALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQL 408
Query: 229 TQRNICCWNAMISGFAINGKCREVLEFFGRME-NLNIRPDAITFLTVLSACAH 280
+ + WN++ISG +G+ E F +M + PDAIT ++L+ C+
Sbjct: 409 QETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQ 461
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 96/233 (41%), Gaps = 6/233 (2%)
Query: 130 RSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQL--GLLDAGK 187
R L +++++ + + F ++ P+ FT+ L A +
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 188 QIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAING 247
Q+ + L +V + L+++Y K G + +A+++F+ +R+ WNA+I G++ NG
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 248 KCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYG 307
+ + F M P A T + +L C G +S+ V +E+ +
Sbjct: 131 YECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKN 190
Query: 308 CMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKL 360
++ + L A L + M + + M+GA +S + E+ I +
Sbjct: 191 ALISFYSKCAELGSAEVLFREMK-DKSTVSWNTMIGA---YSQSGLQEEAITV 239
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 195 bits (496), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 128/424 (30%), Positives = 214/424 (50%), Gaps = 23/424 (5%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATA 56
M ER+ V+WNA+I+ Y G A +F++M + +TW+ + GG + G+ A
Sbjct: 205 MFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGA 264
Query: 57 RRLFDEA---PHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNC----FVWSSMVS 109
L P L V + + + G + +E+ L + V +++++
Sbjct: 265 LGLISRMRNFPTSLDPVAM-IIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLIT 323
Query: 110 GYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFT 169
Y K + A +F + SL WN++I+GY Q E A EM GF+P+ T
Sbjct: 324 MYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSIT 383
Query: 170 VVSVLSACAQLGLLDAGKQIH-HMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF 228
+ S+L CA++ L GK+ H +++ K + + LVD+YAK G +V A+ V +
Sbjct: 384 LASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLM 443
Query: 229 TQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEAL 288
++R+ + ++I G+ G+ L F M I+PD +T + VLSAC+H L+ E
Sbjct: 444 SKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGE 503
Query: 289 EVISKMEA-YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRT 347
+ KM+ Y I ++H+ CMVDL GRAG L +A D+I MP +P+ +L AC
Sbjct: 504 RLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHI 563
Query: 348 HSDMKM----AEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEK 403
H + ++ AE+++++ N + VL++N+YAA+ W K ++R IM D +K
Sbjct: 564 HGNTQIGKWAAEKLLEMKPENP-----GYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKK 618
Query: 404 IAGC 407
GC
Sbjct: 619 DPGC 622
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 149/340 (43%), Gaps = 22/340 (6%)
Query: 7 VTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLFD- 61
+ WN +I+ Y +N E ++ M K T+ ++ D A R +
Sbjct: 110 LPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGS 169
Query: 62 -EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEA 120
E + ++ Y R M AR +F+ M ER+ W+++++ Y +G +EA
Sbjct: 170 IEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEA 229
Query: 121 ETIFGRIPVRSLEI----WNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+F ++ +E+ WN + G +Q G AL MR D ++ L A
Sbjct: 230 FELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKA 289
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
C+ +G + GK+IH + H V + L+ MY+KC DL +A +VF + ++C W
Sbjct: 290 CSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTW 349
Query: 237 NAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA 296
N++ISG+A K E M +P++IT ++L CA L E
Sbjct: 350 NSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKE----FHC 405
Query: 297 YAIEMG-IKHY----GCMVDLLGRAGRL---KEAYDLIKR 328
Y + K Y +VD+ ++G++ K+ DL+ +
Sbjct: 406 YILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSK 445
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 131/291 (45%), Gaps = 20/291 (6%)
Query: 116 SVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLS 175
S+ E I +P WN +IA Y +N E + A++ M ++G PD FT SVL
Sbjct: 99 SIIENSDILHPLP------WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLK 152
Query: 176 ACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICC 235
AC + + G+ +H IE + +V + L+ MY + ++ AR +F+ +R+
Sbjct: 153 ACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVS 212
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKME 295
WNA+I+ +A G E E F +M + IT+ + C G AL +IS+M
Sbjct: 213 WNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMR 272
Query: 296 AY-------AIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTH 348
+ A+ +G+K C L+G KE + L + + V ++
Sbjct: 273 NFPTSLDPVAMIIGLK--AC--SLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKC 328
Query: 349 SDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDG 399
D++ A V + NS+ + N ++S ++ E + +R ++V G
Sbjct: 329 KDLRHALIVFRQTEENSLC---TWNSIISGYAQLNKSEEASHLLREMLVAG 376
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 6/158 (3%)
Query: 141 GYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTV 200
G++ + F +L + A + + S+LSAC + AG Q+H +
Sbjct: 17 GHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEY 76
Query: 201 NPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRME 260
+ ++ LV Y+ A+ + E + WN +I+ +A N EV+ + RM
Sbjct: 77 HSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMV 136
Query: 261 NLNIRPDAITFLTVLSAC------AHGGLLSEALEVIS 292
+ IRPDA T+ +VL AC A G ++ ++EV S
Sbjct: 137 SKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSS 174
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 195 bits (495), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 122/404 (30%), Positives = 204/404 (50%), Gaps = 11/404 (2%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPH--EL 67
+A++ Y + G + AS +F +P W+ MI G+ G LF+ H
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ 204
Query: 68 KGVVTWTVMVDGYARKGEMEAAREV----FELMPERNCFVWSSMVSGYCKKGSVAEAETI 123
T + G + A V ++ + + +V ++V+ Y + +A A ++
Sbjct: 205 PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSV 264
Query: 124 FGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLL 183
F I L +++I GY + G + AL F E+R G +PD V VL +CA+L
Sbjct: 265 FNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDS 324
Query: 184 DAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGF 243
+GK++H + L ++ V S L+DMY+KCG L A +F G ++NI +N++I G
Sbjct: 325 VSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGL 384
Query: 244 AINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA-YAIEMG 302
++G E F + + + PD ITF +L C H GLL++ E+ +M++ + IE
Sbjct: 385 GLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQ 444
Query: 303 IKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIG 362
+HY MV L+G AG+L+EA++ + + + +LGA+L C H + +AE V + I
Sbjct: 445 TEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIH 504
Query: 363 TNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
N R + V+LSN+YA +W++ E++R DG SE G
Sbjct: 505 KNGEERRSVYKVMLSNVYARYGRWDEVERLR----DGISESYGG 544
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 151/338 (44%), Gaps = 18/338 (5%)
Query: 16 YMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF------DEAPHELKG 69
Y N D+ SA +F+ P ++ W+ +I +A+ T LF D P
Sbjct: 50 YALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNF-- 107
Query: 70 VVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKGSVAEAETIFG 125
T+ + G++ + + R + + + S++V Y K G + EA +F
Sbjct: 108 --TYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFC 165
Query: 126 RIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDA 185
IP L +WN MI GY GF ++ + F M+ G +P+ +T+V++ S LL
Sbjct: 166 SIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLV 225
Query: 186 GKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAI 245
+H L + +V LV+MY++C + +A VF ++ ++ +++I+G++
Sbjct: 226 AWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSR 285
Query: 246 NGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKH 305
G +E L F + +PD + VL +CA EV S + +E+ IK
Sbjct: 286 CGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKV 345
Query: 306 YGCMVDLLGRAGRLKEAYDLIKRMP----MEPNETVLG 339
++D+ + G LK A L +P + N +LG
Sbjct: 346 CSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILG 383
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 118/298 (39%), Gaps = 44/298 (14%)
Query: 99 RNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEM 158
R+ + + + Y + A +F P RS+ +WN++I Y + L F ++
Sbjct: 38 RDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQI 97
Query: 159 RAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDL 218
PD FT + ++ + IH + L + S +V Y+K G +
Sbjct: 98 LRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLI 157
Query: 219 VNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSAC 278
V A +F ++ WN MI G+ G + + F M++ +P+ T + + S
Sbjct: 158 VEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTS-- 215
Query: 279 AHGGLLSEALEVIS-KMEAYAIEMGI---KHYGCMV-----------------------D 311
GL+ +L +++ + A+ +++ + + GC + D
Sbjct: 216 ---GLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPD 272
Query: 312 LLG---------RAGRLKEAYDLIKRMPM---EPNETVLGAMLGACRTHSDMKMAEQV 357
L+ R G KEA L + M +P+ ++ +LG+C SD ++V
Sbjct: 273 LVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEV 330
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 187 KQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAIN 246
+++H + +L +P+ + L YA DL++AR +F+ F +R++ WN++I +A
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 247 GKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEV--ISKMEAYAIEMGIK 304
+ VL F ++ + RPD T+ AC G SE+ + + + AI G+
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTY-----ACLARG-FSESFDTKGLRCIHGIAIVSGLG 138
Query: 305 HY----GCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAML---GAC 345
+V +AG + EA L +P +P+ + M+ G C
Sbjct: 139 FDQICGSAIVKAYSKAGLIVEASKLFCSIP-DPDLALWNVMILGYGCC 185
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 194 bits (494), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 138/479 (28%), Positives = 219/479 (45%), Gaps = 94/479 (19%)
Query: 1 MPERNVVTWNAMISGYM-RNGDMES---------ASLVFEEMP----------------- 33
MP RN+VTWN +I G + R+GD + ++F ++
Sbjct: 97 MPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDST 156
Query: 34 -GKTGVTW----------------SQMIGGFARNGDTATARRLFDEAPHELKGVVTWTVM 76
K G+ + ++ + + G ARR+F+ + +V W +
Sbjct: 157 NMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLD--RDLVLWNAL 214
Query: 77 VDGYARKGEMEAAREVFELM-PERN-----CFVWSSMVSG-------------------- 110
V Y G ++ A + +LM ++N F +SS++S
Sbjct: 215 VSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHAILFKVSYQF 274
Query: 111 -----------YCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMR 159
Y K +++A F + VR++ WN MI G+ QNG G A++ F +M
Sbjct: 275 DIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQML 334
Query: 160 AEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLV 219
E +PDE T SVLS+CA+ + KQ+ M+ K V + L+ Y++ G+L
Sbjct: 335 LENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLS 394
Query: 220 NARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA 279
A L F + ++ W ++I A +G E L+ F M ++PD ITFL VLSAC+
Sbjct: 395 EALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQ-KLQPDKITFLEVLSACS 453
Query: 280 HGGLLSEALEVISKM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVL 338
HGGL+ E L +M E Y IE +HY C++DLLGRAG + EA D++ MP EP+ L
Sbjct: 454 HGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHAL 513
Query: 339 GAMLGACRTH---SDMKM-AEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMR 393
A G C H MK A++++++ T + + +LSN Y + W +A +R
Sbjct: 514 AAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYS-----ILSNAYVSEGHWNQAALLR 567
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 190/382 (49%), Gaps = 36/382 (9%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGG-FARNGDT---------ATARRL 59
N ++ Y + + + A +F+EMP + VTW+ +I G R+GDT +R L
Sbjct: 75 NKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRIL 134
Query: 60 FDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMP----ERNCFVWSSMVSGYCKKG 115
F + + V++ ++ M+A ++ LM E +CF +S+V Y K G
Sbjct: 135 FTDVSLD---HVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCG 191
Query: 116 SVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEG--FEPDEFTVVSV 173
+ EA +F + R L +WN +++ YV NG + A + M ++ F D FT S+
Sbjct: 192 LIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSL 251
Query: 174 LSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNI 233
LSAC ++ GKQIH ++ + V + L++MYAK L +AR FE RN+
Sbjct: 252 LSACR----IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNV 307
Query: 234 CCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISK 293
WNAMI GFA NG+ RE + FG+M N++PD +TF +VLS+CA + E I +
Sbjct: 308 VSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWE----IKQ 363
Query: 294 MEAYAIEMGIKHY----GCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTH- 348
++A + G + ++ R G L EA L EP+ +++GA +H
Sbjct: 364 VQAMVTKKGSADFLSVANSLISSYSRNGNLSEAL-LCFHSIREPDLVSWTSVIGALASHG 422
Query: 349 ---SDMKMAEQVIKLIGTNSIT 367
++M E +++ + + IT
Sbjct: 423 FAEESLQMFESMLQKLQPDKIT 444
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 129/302 (42%), Gaps = 47/302 (15%)
Query: 102 FVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNG--FGERALQAFEEMR 159
F+ + ++ Y K +A+ +F +P+R++ WN +I G +Q RA F +
Sbjct: 72 FLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLS 131
Query: 160 AEGFEP---DEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCG 216
F D + + ++ C + AG Q+H ++ + L + F + LV Y KCG
Sbjct: 132 RILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCG 191
Query: 217 DLVNARLVFEGFTQRNICCWNAMISGFAINGKCRE---VLEFFGRMENLNIRPDAITFLT 273
+V AR VFE R++ WNA++S + +NG E +L+ G +N R D TF +
Sbjct: 192 LIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKN-RFRGDYFTFSS 250
Query: 274 VLSAC-------------------------------AHGGLLSEALEVISKMEAYAIEMG 302
+LSAC A LS+A E M +
Sbjct: 251 LLSACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESM----VVRN 306
Query: 303 IKHYGCMVDLLGRAGRLKEAYDLIKRMPME---PNETVLGAMLGACRTHSDMKMAEQVIK 359
+ + M+ + G +EA L +M +E P+E ++L +C S + +QV
Sbjct: 307 VVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQA 366
Query: 360 LI 361
++
Sbjct: 367 MV 368
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 194 bits (494), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 207/441 (46%), Gaps = 49/441 (11%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
N+ NA+IS Y R G ++ A +F+ M + V+W+ +I + A +L D
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRM- 276
Query: 65 HELKGV----VTWTVMVDGYARKGEMEAAR------------------------------ 90
L GV VTW + G G A
Sbjct: 277 -YLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGA 335
Query: 91 ----EVFELMPERNCF-------VWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMI 139
+VF + R+C V +S+++ Y + + A +F ++ SL WN++I
Sbjct: 336 LKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSII 395
Query: 140 AGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLT 199
+G+ N E +EM GF P+ T+ S+L A++G L GK+ H I ++
Sbjct: 396 SGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSY 455
Query: 200 VNPFVL-SGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGR 258
+ +L + LVDMYAK G+++ A+ VF+ +R+ + ++I G+ GK L +F
Sbjct: 456 KDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKD 515
Query: 259 MENLNIRPDAITFLTVLSACAHGGLLSEALEVISKME-AYAIEMGIKHYGCMVDLLGRAG 317
M+ I+PD +T + VLSAC+H L+ E + +KME + I + ++HY CMVDL RAG
Sbjct: 516 MDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAG 575
Query: 318 RLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLS 377
L +A D+ +P EP+ + +L AC H + + E + + H +LL+
Sbjct: 576 YLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLA 635
Query: 378 NIYAASEKWEKAEKMRGIMVD 398
++YA + W K ++ ++ D
Sbjct: 636 DMYAVTGSWSKLVTVKTLLSD 656
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 168/392 (42%), Gaps = 48/392 (12%)
Query: 7 VTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLFD- 61
+ WN +I Y+RN + + V++ M K T+ +I A D A R +
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS 209
Query: 62 -EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEA 120
E + ++ Y R G+++ AR +F+ M ER+ W+++++ Y + + EA
Sbjct: 210 IEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEA 269
Query: 121 ETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+ R+ + +E WNT+ G ++ G AL MR +++ L A
Sbjct: 270 FKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKA 329
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPF--VLSGLVDMYAKCGDLVNARLVFEGFTQRNIC 234
C+ +G L GK H ++ + V + L+ MY++C DL +A +VF+ ++
Sbjct: 330 CSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLS 389
Query: 235 CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEV---I 291
WN++ISGFA N + E M P+ IT ++L A G L E I
Sbjct: 390 TWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYI 449
Query: 292 SKMEAYA---------IEMGIKH--------------------YGCMVDLLGRAGRLKEA 322
+ ++Y ++M K Y ++D GR G+ + A
Sbjct: 450 LRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVA 509
Query: 323 YDLIKRMP---MEPNETVLGAMLGACRTHSDM 351
K M ++P+ + A+L AC +HS++
Sbjct: 510 LAWFKDMDRSGIKPDHVTMVAVLSAC-SHSNL 540
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%)
Query: 107 MVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
+V+ Y + EA+TI + WN +I Y++N + ++ ++ M ++G D
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRAD 183
Query: 167 EFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFE 226
EFT SV+ ACA L G+ +H IE N +V + L+ MY + G + AR +F+
Sbjct: 184 EFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFD 243
Query: 227 GFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSE 286
++R+ WNA+I+ + K E + RM + +T+ T+ C G
Sbjct: 244 RMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIG 303
Query: 287 ALEVISKMEAYAIEMG 302
AL + M + +G
Sbjct: 304 ALNCVVGMRNCNVRIG 319
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 78/189 (41%), Gaps = 2/189 (1%)
Query: 143 VQNGFGERALQAFEEMRAEG--FEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTV 200
+ +G A + F +R + E ++ S+LS C G+Q+H L
Sbjct: 57 ISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEF 116
Query: 201 NPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRME 260
+ ++ LV Y+ L A+ + E + WN +I + N + +E + + RM
Sbjct: 117 DSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMM 176
Query: 261 NLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLK 320
+ IR D T+ +V+ ACA + V +E + + ++ + R G++
Sbjct: 177 SKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVD 236
Query: 321 EAYDLIKRM 329
A L RM
Sbjct: 237 VARRLFDRM 245
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 194 bits (494), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 207/441 (46%), Gaps = 49/441 (11%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
N+ NA+IS Y R G ++ A +F+ M + V+W+ +I + A +L D
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRM- 276
Query: 65 HELKGV----VTWTVMVDGYARKGEMEAAR------------------------------ 90
L GV VTW + G G A
Sbjct: 277 -YLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGA 335
Query: 91 ----EVFELMPERNCF-------VWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMI 139
+VF + R+C V +S+++ Y + + A +F ++ SL WN++I
Sbjct: 336 LKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSII 395
Query: 140 AGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLT 199
+G+ N E +EM GF P+ T+ S+L A++G L GK+ H I ++
Sbjct: 396 SGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSY 455
Query: 200 VNPFVL-SGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGR 258
+ +L + LVDMYAK G+++ A+ VF+ +R+ + ++I G+ GK L +F
Sbjct: 456 KDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKD 515
Query: 259 MENLNIRPDAITFLTVLSACAHGGLLSEALEVISKME-AYAIEMGIKHYGCMVDLLGRAG 317
M+ I+PD +T + VLSAC+H L+ E + +KME + I + ++HY CMVDL RAG
Sbjct: 516 MDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAG 575
Query: 318 RLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLS 377
L +A D+ +P EP+ + +L AC H + + E + + H +LL+
Sbjct: 576 YLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLA 635
Query: 378 NIYAASEKWEKAEKMRGIMVD 398
++YA + W K ++ ++ D
Sbjct: 636 DMYAVTGSWSKLVTVKTLLSD 656
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 168/392 (42%), Gaps = 48/392 (12%)
Query: 7 VTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLFD- 61
+ WN +I Y+RN + + V++ M K T+ +I A D A R +
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS 209
Query: 62 -EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEA 120
E + ++ Y R G+++ AR +F+ M ER+ W+++++ Y + + EA
Sbjct: 210 IEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEA 269
Query: 121 ETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+ R+ + +E WNT+ G ++ G AL MR +++ L A
Sbjct: 270 FKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKA 329
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPF--VLSGLVDMYAKCGDLVNARLVFEGFTQRNIC 234
C+ +G L GK H ++ + V + L+ MY++C DL +A +VF+ ++
Sbjct: 330 CSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLS 389
Query: 235 CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEV---I 291
WN++ISGFA N + E M P+ IT ++L A G L E I
Sbjct: 390 TWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYI 449
Query: 292 SKMEAYA---------IEMGIKH--------------------YGCMVDLLGRAGRLKEA 322
+ ++Y ++M K Y ++D GR G+ + A
Sbjct: 450 LRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVA 509
Query: 323 YDLIKRMP---MEPNETVLGAMLGACRTHSDM 351
K M ++P+ + A+L AC +HS++
Sbjct: 510 LAWFKDMDRSGIKPDHVTMVAVLSAC-SHSNL 540
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%)
Query: 107 MVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
+V+ Y + EA+TI + WN +I Y++N + ++ ++ M ++G D
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRAD 183
Query: 167 EFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFE 226
EFT SV+ ACA L G+ +H IE N +V + L+ MY + G + AR +F+
Sbjct: 184 EFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFD 243
Query: 227 GFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSE 286
++R+ WNA+I+ + K E + RM + +T+ T+ C G
Sbjct: 244 RMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIG 303
Query: 287 ALEVISKMEAYAIEMG 302
AL + M + +G
Sbjct: 304 ALNCVVGMRNCNVRIG 319
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 78/189 (41%), Gaps = 2/189 (1%)
Query: 143 VQNGFGERALQAFEEMRAEG--FEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTV 200
+ +G A + F +R + E ++ S+LS C G+Q+H L
Sbjct: 57 ISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEF 116
Query: 201 NPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRME 260
+ ++ LV Y+ L A+ + E + WN +I + N + +E + + RM
Sbjct: 117 DSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMM 176
Query: 261 NLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLK 320
+ IR D T+ +V+ ACA + V +E + + ++ + R G++
Sbjct: 177 SKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVD 236
Query: 321 EAYDLIKRM 329
A L RM
Sbjct: 237 VARRLFDRM 245
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/411 (30%), Positives = 206/411 (50%), Gaps = 18/411 (4%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKG 69
+A+++ Y + G A LVF+ M K V W +I G +NG A ++F + +
Sbjct: 412 SALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDS 471
Query: 70 VVTWT-VMVDGYARKGEMEAAR---EVFELMPER----NCFVWSSMVSGYCKKGSVAEAE 121
+ + +M +EA R +V M + N FV SS++ Y K G A
Sbjct: 472 LKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMAL 531
Query: 122 TIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLG 181
+F + ++ WN+MI+ Y +N E ++ F M ++G PD ++ SVL A +
Sbjct: 532 KVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTA 591
Query: 182 LLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMIS 241
L GK +H + + + + L+DMY KCG A +F+ +++ WN MI
Sbjct: 592 SLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIY 651
Query: 242 GFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYAIE 300
G+ +G C L F M+ PD +TFL+++SAC H G + E + M + Y IE
Sbjct: 652 GYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIE 711
Query: 301 MGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKM----AEQ 356
++HY MVDLLGRAG L+EAY IK MP+E + ++ +L A RTH ++++ AE+
Sbjct: 712 PNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEK 771
Query: 357 VIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
++++ R ++ V L N+Y + +A K+ G+M + K GC
Sbjct: 772 LLRM----EPERGSTY-VQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGC 817
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 170/331 (51%), Gaps = 9/331 (2%)
Query: 11 AMISGYMRNGDMESASLVFEEMPGKTGVT-WSQMIGGFARNGDTATARRLFDEAPH-ELK 68
A+I Y + G A VF E+ K+ V W+ MI GF +G ++ L+ A + +K
Sbjct: 210 ALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVK 269
Query: 69 GVVTWTVMVDGYARKGE-----MEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETI 123
V T G + E + +V ++ + +V +S++S Y K G V EAET+
Sbjct: 270 LVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETV 329
Query: 124 FGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLL 183
F + + LEIWN M+A Y +N +G AL F MR + PD FT+ +V+S C+ LGL
Sbjct: 330 FSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLY 389
Query: 184 DAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGF 243
+ GK +H + + + + S L+ +Y+KCG +A LVF+ ++++ W ++ISG
Sbjct: 390 NYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGL 449
Query: 244 AINGKCREVLEFFGRM--ENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEM 301
NGK +E L+ FG M ++ +++PD+ +V +ACA L L+V M + +
Sbjct: 450 CKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVL 509
Query: 302 GIKHYGCMVDLLGRAGRLKEAYDLIKRMPME 332
+ ++DL + G + A + M E
Sbjct: 510 NVFVGSSLIDLYSKCGLPEMALKVFTSMSTE 540
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 113/235 (48%), Gaps = 18/235 (7%)
Query: 102 FVWSSMVSGYCKKGSVAEAETIF-------GRIPVRSLEIWNTMIAGYVQNGFGERALQA 154
F+ +S+V+ Y K G + A +F + R + +WN+MI GY + + +
Sbjct: 96 FIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGC 155
Query: 155 FEEMRAEGFEPDEFTVVSVLSACAQLGLL--DAGKQIHHMIEHKRLTVNPFVLSGLVDMY 212
F M G PD F++ V+S + G + GKQIH + L + F+ + L+DMY
Sbjct: 156 FRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMY 215
Query: 213 AKCGDLVNARLVF-EGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITF 271
K G ++A VF E + N+ WN MI GF +G C L+ + +N +++ + +F
Sbjct: 216 FKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSF 275
Query: 272 LTVLSACAHGGLLSEALEVISKMEAYAIEMGIKH--YGC--MVDLLGRAGRLKEA 322
L AC+ SE ++ ++MG+ + Y C ++ + + G + EA
Sbjct: 276 TGALGACSQ----SENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEA 326
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 93/197 (47%), Gaps = 22/197 (11%)
Query: 136 NTMIAGYVQNGFGERALQAFEEMRAEG-FEPDEFTVVSVLSACAQLGLLDAGKQIHHMIE 194
N+ I +Q G +AL + + F FT S+L AC+ L L GK IH +
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVV 87
Query: 195 HKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ-------RNICCWNAMISGFAING 247
+PF+ + LV+MY KCG L A VF+G++Q R++ WN+MI G+
Sbjct: 88 VLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFR 147
Query: 248 KCREVLEFFGRMENLNIRPDAITFLTVLSACA-------------HGGLLSEALEVISKM 294
+ +E + F RM +RPDA + V+S HG +L +L+ S +
Sbjct: 148 RFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFL 207
Query: 295 EAYAIEMGIKHYGCMVD 311
+ I+M K +G +D
Sbjct: 208 KTALIDMYFK-FGLSID 223
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 54/236 (22%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEM------PGKTGVT--------WSQMIGG 46
M N+V WN+MIS Y RN E + +F M P +T + ++ G
Sbjct: 537 MSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKG 596
Query: 47 FARNGDTATARRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSS 106
+ +G T RL + LK ++D Y + G + A +F+ M ++ W+
Sbjct: 597 KSLHGYTL---RLGIPSDTHLK-----NALIDMYVKCGFSKYAENIFKKMQHKSLITWNL 648
Query: 107 MVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
M+ GY GS + T AL F+EM+ G PD
Sbjct: 649 MIYGY---GSHGDCIT----------------------------ALSLFDEMKKAGESPD 677
Query: 167 EFTVVSVLSACAQLGLLDAGKQIHHMIEHKR-LTVNPFVLSGLVDMYAKCGDLVNA 221
+ T +S++SAC G ++ GK I ++ + N + +VD+ + G L A
Sbjct: 678 DVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEA 733
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 199/399 (49%), Gaps = 8/399 (2%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE-- 62
++ +++ + Y + G +E + +F+ +P K W+ MI GF G A LF E
Sbjct: 484 DLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEML 543
Query: 63 ----APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVA 118
+P E TV + E ++ + S++V+ Y K GS+
Sbjct: 544 DDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLK 603
Query: 119 EAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACA 178
A ++ R+P +++I+GY Q+G + F +M GF D F + S+L A A
Sbjct: 604 LARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAA 663
Query: 179 QLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNA 238
G Q+H I L P V S L+ MY+K G + + F ++ W A
Sbjct: 664 LSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTA 723
Query: 239 MISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEA-LEVISKMEAY 297
+I+ +A +GK E L+ + M+ +PD +TF+ VLSAC+HGGL+ E+ + S ++ Y
Sbjct: 724 LIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDY 783
Query: 298 AIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQV 357
IE +HY CMVD LGR+GRL+EA I M ++P+ V G +L AC+ H ++++ +
Sbjct: 784 GIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVA 843
Query: 358 IKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIM 396
K + A ++ + LSNI A +W++ E+ R +M
Sbjct: 844 AKKAIELEPSDAGAY-ISLSNILAEVGEWDEVEETRKLM 881
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 161/339 (47%), Gaps = 15/339 (4%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
+V A++ Y + G M A VF +P + V+W+ M+ G+ ++ D +A +F E
Sbjct: 284 DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMR 343
Query: 65 HELKGV----VTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSS----MVSGYCKKGS 116
H GV T T ++ R + A +V + + ++ SS ++S Y K G
Sbjct: 344 HS--GVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGD 401
Query: 117 VAEAETIFGRIP-VRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLS 175
+ +E +F + ++ I N MI + Q+ +A++ F M EG DEF+V S+LS
Sbjct: 402 IDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLS 461
Query: 176 ACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICC 235
L L+ GKQ+H L ++ V S L +Y+KCG L + +F+G ++ C
Sbjct: 462 V---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNAC 518
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKME 295
W +MISGF G RE + F M + PD T VL+ C+ L E+
Sbjct: 519 WASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTL 578
Query: 296 AYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMP-MEP 333
I+ G+ +V++ + G LK A + R+P ++P
Sbjct: 579 RAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDP 617
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 176/392 (44%), Gaps = 45/392 (11%)
Query: 7 VTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE--AP 64
V +A+I + +N E A VF + W+ +I G RN + LF E
Sbjct: 186 VVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVG 245
Query: 65 HELKGVVTWTVMVDGYA-----RKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAE 119
+ T++ ++ A R G++ AR V + E + FV +++V Y K G +AE
Sbjct: 246 FQKPDSYTYSSVLAACASLEKLRFGKVVQAR-VIKCGAE-DVFVCTAIVDLYAKCGHMAE 303
Query: 120 AETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQ 179
A +F RIP S+ W M++GY ++ AL+ F+EMR G E + TV SV+SAC +
Sbjct: 304 AMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGR 363
Query: 180 LGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF---TQRNICCW 236
++ Q+H + ++ V + L+ MY+K GD+ + VFE ++NI
Sbjct: 364 PSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-- 421
Query: 237 NAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSAC--------AHGGLLSEAL 288
N MI+ F+ + K + + F RM +R D + ++LS HG L L
Sbjct: 422 NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGL 481
Query: 289 -----------EVISKM----EAYAIEMGI--KHYGC---MVDLLGRAGRLKEAYDLIKR 328
+ SK E+Y + GI K C M+ G L+EA L
Sbjct: 482 VLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSE 541
Query: 329 M---PMEPNETVLGAMLGACRTHSDMKMAEQV 357
M P+E+ L A+L C +H + +++
Sbjct: 542 MLDDGTSPDESTLAAVLTVCSSHPSLPRGKEI 573
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 11/269 (4%)
Query: 95 LMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQA 154
L+P + F+ S++S Y GS+A+A +F IP + N MI+GY Q+ E +L+
Sbjct: 79 LLP-FDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRF 137
Query: 155 FEEMRAEGFEPDEFTVVSVLSACAQL-GLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYA 213
F +M GFE +E + SV+SAC+ L L + H I+ V S L+D+++
Sbjct: 138 FSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYE-VVESALIDVFS 196
Query: 214 KCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLT 273
K +A VF N+ CWN +I+G N V + F M +PD+ T+ +
Sbjct: 197 KNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSS 256
Query: 274 VLSACAHGGLLSEALEVISKMEAYAIEMGIKH-YGC--MVDLLGRAGRLKEAYDLIKRMP 330
VL+ACA E L ++A I+ G + + C +VDL + G + EA ++ R+P
Sbjct: 257 VLAACAS----LEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIP 312
Query: 331 MEPNETVLGAMLGACRTHSDMKMAEQVIK 359
P+ ML +D A ++ K
Sbjct: 313 -NPSVVSWTVMLSGYTKSNDAFSALEIFK 340
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 168/399 (42%), Gaps = 75/399 (18%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
+P+ +VV+ N MISGY ++ E + F +M G +++ G + +A LF
Sbjct: 110 IPQPDVVSCNIMISGYKQHRLFEESLRFFSKM-HFLGFEANEISYGSVISACSALQAPLF 168
Query: 61 DE--APHELK-GVVTWTV----MVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCK 113
E H +K G + V ++D +++ E A +VF N YC
Sbjct: 169 SELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANV---------YC- 218
Query: 114 KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSV 173
WNT+IAG ++N F EM +PD +T SV
Sbjct: 219 ---------------------WNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSV 257
Query: 174 LSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNI 233
L+ACA L L GK + + K + FV + +VD+YAKCG + A VF ++
Sbjct: 258 LAACASLEKLRFGKVVQARVI-KCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSV 316
Query: 234 CCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISK 293
W M+SG+ + LE F M + + + T +V+SAC ++ EA S+
Sbjct: 317 VSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEA----SQ 372
Query: 294 MEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKM 353
+ A+ + G + +V A++ D+ +
Sbjct: 373 VHAWVFKSGFY----------------------------LDSSVAAALISMYSKSGDIDL 404
Query: 354 AEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKM 392
+EQV + + + I R + NV++++ ++ S+K KA ++
Sbjct: 405 SEQVFEDL--DDIQRQNIVNVMITS-FSQSKKPGKAIRL 440
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 12/143 (8%)
Query: 191 HMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCR 250
H++ L + F+ L+ Y+ G + +A +F+ Q ++ N MISG+ +
Sbjct: 73 HLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFE 132
Query: 251 EVLEFFGRMENLNIRPDAITFLTVLSACA--HGGLLSEALEVISKMEAYAIEMGIKHY-- 306
E L FF +M L + I++ +V+SAC+ L SE + + I+MG Y
Sbjct: 133 ESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELV------CCHTIKMGYFFYEV 186
Query: 307 --GCMVDLLGRAGRLKEAYDLIK 327
++D+ + R ++AY + +
Sbjct: 187 VESALIDVFSKNLRFEDAYKVFR 209
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 128/401 (31%), Positives = 202/401 (50%), Gaps = 26/401 (6%)
Query: 12 MISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE------APH 65
++ Y + GDM A VF EMP V WS MI F +NG A LF P+
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347
Query: 66 ELKGVVTWTVMVDGYARKGEMEAARE-----VFELMPERNCFVWSSMVSGYCKKGSVAEA 120
E T + +++G A G+ E V ++ + + +V ++++ Y K + A
Sbjct: 348 EF----TLSSILNGCA-IGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTA 402
Query: 121 ETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQL 180
+F + ++ WNT+I GY G G +A F E E T S L ACA L
Sbjct: 403 VKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASL 462
Query: 181 GLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMI 240
+D G Q+H + V + L+DMYAKCGD+ A+ VF ++ WNA+I
Sbjct: 463 ASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALI 522
Query: 241 SGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYAI 299
SG++ +G R+ L M++ + +P+ +TFL VLS C++ GL+ + E M + I
Sbjct: 523 SGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGI 582
Query: 300 EMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSD----MKMAE 355
E ++HY CMV LLGR+G+L +A LI+ +P EP+ + AML A ++ + AE
Sbjct: 583 EPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAE 642
Query: 356 QVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIM 396
+++K+ + T VL+SN+YA +++W +R M
Sbjct: 643 EILKINPKDEATY-----VLVSNMYAGAKQWANVASIRKSM 678
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 180/413 (43%), Gaps = 46/413 (11%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEA----PH 65
N +++ Y++ G + A +F+EMP + V++ + G+A RL E PH
Sbjct: 88 NILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHELNPH 147
Query: 66 ELKGVVTWTVMVDGYARKGEMEA--AREVFELMPERNCFVWSSMVSGYCKKGSVAEAETI 123
+ V +D K E+ + +L + N FV +++++ Y GSV A T+
Sbjct: 148 VFTSFLKLFVSLD----KAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTV 203
Query: 124 FGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLL 183
F I + + +W +++ YV+NG+ E +L+ MR GF P+ +T + L A LG
Sbjct: 204 FEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAF 263
Query: 184 DAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGF 243
D K +H I ++P V GL+ +Y + GD+ +A VF + ++ W+ MI+ F
Sbjct: 264 DFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARF 323
Query: 244 AINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGI 303
NG C E ++ F RM + P+ T ++L+ CA G ++ + ++ I
Sbjct: 324 CQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDI 383
Query: 304 KHYGCMVDLLGRAGRLKEAYDLIK----------------------------------RM 329
++D+ + ++ A L R
Sbjct: 384 YVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRN 443
Query: 330 PMEPNETVLGAMLGACRTHSDMKMAEQVIKL-IGTNSITRADSHNVLLSNIYA 381
+ E + LGAC + + M + QV L I TN+ + N L+ ++YA
Sbjct: 444 QVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLI-DMYA 495
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 150/338 (44%), Gaps = 16/338 (4%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFD- 61
+ N A+I+ Y G ++SA VFE + K V W+ ++ + NG + +L
Sbjct: 178 DSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSC 237
Query: 62 -EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSS-----MVSGYCKKG 115
+ T+ + G + A+ V + + C+V ++ Y + G
Sbjct: 238 MRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQIL-KTCYVLDPRVGVGLLQLYTQLG 296
Query: 116 SVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLS 175
+++A +F +P + W+ MIA + QNGF A+ F MR P+EFT+ S+L+
Sbjct: 297 DMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILN 356
Query: 176 ACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICC 235
CA G+Q+H ++ ++ +V + L+D+YAKC + A +F + +N
Sbjct: 357 GCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVS 416
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKME 295
WN +I G+ G+ + F + +TF + L ACA L S L V ++
Sbjct: 417 WNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACA--SLASMDLGV--QVH 472
Query: 296 AYAIEMG----IKHYGCMVDLLGRAGRLKEAYDLIKRM 329
AI+ + ++D+ + G +K A + M
Sbjct: 473 GLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEM 510
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 145/314 (46%), Gaps = 21/314 (6%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
+ ++ NA+I Y + M++A +F E+ K V+W+ +I G+ G+ A +F E
Sbjct: 380 DLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFRE 439
Query: 63 APHELKGV--VTWTVMVDGYARKGEMEAAREVFELMPERN----CFVWSSMVSGYCKKGS 116
A V VT++ + A M+ +V L + N V +S++ Y K G
Sbjct: 440 ALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGD 499
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+ A+++F + + WN +I+GY +G G +AL+ + M+ +P+ T + VLS
Sbjct: 500 IKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSG 559
Query: 177 CAQLGLLDAGKQ-IHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT-QRNIC 234
C+ GL+D G++ MI + + +V + + G L A + EG + ++
Sbjct: 560 CSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVM 619
Query: 235 CWNAMISGFAINGKCREVLEFFGRM---ENLNIRP-DAITFLTVLSACAHGGLLSEALEV 290
W AM+S ++N E F R E L I P D T++ V + A + +
Sbjct: 620 IWRAMLSA-SMNQNNEE----FARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASI 674
Query: 291 ISKMEAYAIEMGIK 304
M+ EMG+K
Sbjct: 675 RKSMK----EMGVK 684
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 129/330 (39%), Gaps = 48/330 (14%)
Query: 102 FVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYV-QNGFGERALQAFEEMRA 160
F + +++ Y K G +A +F +P R+ + T+ GY Q+ G + +
Sbjct: 85 FATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIG-----LYSRLHR 139
Query: 161 EGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVN 220
EG E + S L L + +H I N FV + L++ Y+ CG + +
Sbjct: 140 EGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDS 199
Query: 221 ARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSAC-- 278
AR VFEG ++I W ++S + NG + L+ M P+ TF T L A
Sbjct: 200 ARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIG 259
Query: 279 ---------AHGGLL------------------------SEALEVISKMEAYAIEMGIKH 305
HG +L S+A +V ++M + +
Sbjct: 260 LGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMP----KNDVVP 315
Query: 306 YGCMVDLLGRAGRLKEAYDLIKRMP---MEPNETVLGAMLGACRTHSDMKMAEQVIKLIG 362
+ M+ + G EA DL RM + PNE L ++L C + EQ+ L+
Sbjct: 316 WSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVV 375
Query: 363 TNSITRADSHNVLLSNIYAASEKWEKAEKM 392
+ L ++YA EK + A K+
Sbjct: 376 KVGFDLDIYVSNALIDVYAKCEKMDTAVKL 405
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 191 bits (486), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 112/310 (36%), Positives = 167/310 (53%), Gaps = 20/310 (6%)
Query: 102 FVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQ-----NGFGERALQAFE 156
+ ++++ Y K G + A +F +P R+ WN MI GY N +A+ F
Sbjct: 148 LIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFR 207
Query: 157 EMR--AEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLT--VNPFVLSGLVDMY 212
G P + T+V VLSA +Q GLL+ G +H IE T V+ F+ + LVDMY
Sbjct: 208 RFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMY 267
Query: 213 AKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFL 272
+KCG L NA VFE +N+ W +M +G A+NG+ E RM I+P+ ITF
Sbjct: 268 SKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFT 327
Query: 273 TVLSACAHGGLLSEALEVISKMEA-YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPM 331
++LSA H GL+ E +E+ M+ + + I+HYGC+VDLLG+AGR++EAY I MP+
Sbjct: 328 SLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPI 387
Query: 332 EPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSH--------NVLLSNIYAAS 383
+P+ +L ++ AC + + M E++ K + I R D V LSN+ A
Sbjct: 388 KPDAILLRSLCNACSIYGETVMGEEIGKAL--LEIEREDEKLSGSECEDYVALSNVLAHK 445
Query: 384 EKWEKAEKMR 393
KW + EK+R
Sbjct: 446 GKWVEVEKLR 455
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 18/229 (7%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTA--TARR---LFDEAP 64
++ Y +NGD+ A VF+EMP +T VTW+ MIGG+ + D AR+ LF
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 65 HELKGV----VTWTVMVDGYARKGEMEAAR------EVFELMPERNCFVWSSMVSGYCKK 114
GV T ++ ++ G +E E PE + F+ +++V Y K
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKC 270
Query: 115 GSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVL 174
G + A ++F + V+++ W +M G NG G M G +P+E T S+L
Sbjct: 271 GCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLL 330
Query: 175 SACAQLGLLDAGKQIHHMIEHKRLTVNPFV--LSGLVDMYAKCGDLVNA 221
SA +GL++ G ++ ++ R V P + +VD+ K G + A
Sbjct: 331 SAYRHIGLVEEGIELFKSMK-TRFGVTPVIEHYGCIVDLLGKAGRIQEA 378
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 191 bits (485), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 130/446 (29%), Positives = 219/446 (49%), Gaps = 50/446 (11%)
Query: 7 VTWNAMISGYMRNGDMESASLVFEEMPG-KTGVTWSQMIGGFARNGDTATARRL------ 59
V NAMI+ Y R GD++ A VF P ++W+ +I G+A+NG A ++
Sbjct: 194 VARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEE 253
Query: 60 ---------FDEAPHELKGVVTWTV----------------------MVDGYARKGEMEA 88
F + L + + + +VD Y + G M+
Sbjct: 254 NGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKY 313
Query: 89 AREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFG 148
A L N + SSM+ GY +G + EA+ +F + ++L +W M GY+
Sbjct: 314 AESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQP 373
Query: 149 ERALQAFEEMRA-EGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSG 207
+ L+ A E PD +VSVL AC+ ++ GK+IH + ++ +++
Sbjct: 374 DSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTA 433
Query: 208 LVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPD 267
VDMY+KCG++ A +F+ +R+ +NAMI+G A +G + + F M +PD
Sbjct: 434 FVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPD 493
Query: 268 AITFLTVLSACAHGGLLSEALEVISKM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLI 326
ITF+ +LSAC H GL+ E + M EAY I HY CM+DL G+A RL +A +L+
Sbjct: 494 EITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELM 553
Query: 327 KRMP-MEPNETVLGAMLGACRTHSDMKMA----EQVIKLIGTNSITRADSHNVLLSNIYA 381
+ + +E + +LGA L AC + + ++ E+++ + G+N S + ++N YA
Sbjct: 554 EGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNG-----SRYIQIANAYA 608
Query: 382 ASEKWEKAEKMRGIMVDGESEKIAGC 407
+S +W++ +++R M E E +GC
Sbjct: 609 SSGRWDEMQRIRHQMRGKELEIFSGC 634
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 187/425 (44%), Gaps = 78/425 (18%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFE-EMPGKTGVTWSQMIGGFAR-NGDTATARR 58
M ERNV +WNA+I+ Y++ +++ A +FE + + +T++ ++ GFA+ +G + A
Sbjct: 49 MLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIE 108
Query: 59 LFDEAPHELKGVV-----TWTVMV------------------------DG---------- 79
+F E + K + T T MV DG
Sbjct: 109 MFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIH 168
Query: 80 -YARKGEMEAAREVFE--LMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEI-W 135
Y++ G+ + +F + + ++M++ YC++G + +A ++F R P + I W
Sbjct: 169 MYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISW 228
Query: 136 NTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEH 195
NT+IAGY QNG+ E AL+ M G + DE + +VL+ + L L GK++H +
Sbjct: 229 NTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLK 288
Query: 196 KRLTVNPFVLSGLVDMYAKCGD-------------------------------LVNARLV 224
N FV SG+VD+Y KCG+ +V A+ +
Sbjct: 289 NGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRL 348
Query: 225 FEGFTQRNICCWNAMISGFAINGKCREVLEFF-GRMENLNIRPDAITFLTVLSACAHGGL 283
F+ +++N+ W AM G+ + VLE + N PD++ ++VL AC+
Sbjct: 349 FDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAY 408
Query: 284 LSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLG 343
+ E+ I M K VD+ + G ++ A + I E + + AM+
Sbjct: 409 MEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYA-ERIFDSSFERDTVMYNAMIA 467
Query: 344 ACRTH 348
C H
Sbjct: 468 GCAHH 472
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 150/311 (48%), Gaps = 13/311 (4%)
Query: 71 VTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPV- 129
V+ +V+ Y++ G + AR VF+ M ERN + W+++++ Y K +V EA +F
Sbjct: 24 VSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCE 83
Query: 130 RSLEIWNTMIAGYVQ-NGFGERALQAFEEMRAEGFEP---DEFTVVSVLSACAQLGLLDA 185
R L +NT+++G+ + +G A++ F EM + + D+FTV +++ A+L +
Sbjct: 84 RDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFY 143
Query: 186 GKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNI--CCWNAMISGF 243
G+Q+H ++ F +S L+ MY+KCG +F G + NAMI+ +
Sbjct: 144 GEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAY 203
Query: 244 AINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGI 303
G + L F R LN D I++ T+++ A G EAL++ ME ++
Sbjct: 204 CREGDIDKALSVFWRNPELN---DTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDE 260
Query: 304 KHYGCMVDLLGRAGRL---KEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKL 360
+G ++++L L KE + + + N+ V ++ +MK AE L
Sbjct: 261 HSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLL 320
Query: 361 IGTNSITRADS 371
G ++ A S
Sbjct: 321 YGFGNLYSASS 331
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/394 (30%), Positives = 203/394 (51%), Gaps = 17/394 (4%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKG 69
A+I+ Y++ G E++ V E +P K V W+ MI G R G A +F E
Sbjct: 284 TALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSD 343
Query: 70 VVTWTV--MVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKGSVAEAETI 123
+ + + +V A+ G + V + + +S+++ Y K G + ++ I
Sbjct: 344 LSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVI 403
Query: 124 FGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEP-DEFTVVSVLSACAQLGL 182
F R+ R L WN +I+GY QN +AL FEEM+ + + D FTVVS+L AC+ G
Sbjct: 404 FERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGA 463
Query: 183 LDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISG 242
L GK IH ++ + V + LVDMY+KCG L A+ F+ + +++ W +I+G
Sbjct: 464 LPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAG 523
Query: 243 FAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYAIEM 301
+ +GK LE + + + P+ + FL VLS+C+H G++ + L++ S M + +E
Sbjct: 524 YGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEP 583
Query: 302 GIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMK----MAEQV 357
+H C+VDLL RA R+++A+ K P+ VLG +L ACR + + + E +
Sbjct: 584 NHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDM 643
Query: 358 IKLIGTNSITRADSHNVLLSNIYAASEKWEKAEK 391
I+L ++ H V L + +AA ++W+ +
Sbjct: 644 IELKPGDA-----GHYVKLGHSFAAMKRWDDVSE 672
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 121/477 (25%), Positives = 187/477 (39%), Gaps = 123/477 (25%)
Query: 1 MPERNVVTWNAMISGYMRNGDM-ESASLV---------------FEEMPGKTGVTWSQMI 44
M ER+VV W AMI Y R G + E+ SLV E + G +T Q +
Sbjct: 107 MRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCL 166
Query: 45 GGFA--------------------RNGDTATARRLFDEAPHELKGVVTWTVMVDGYARKG 84
FA + A+ LFD+ E + +V+W M+ GYA G
Sbjct: 167 HDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQM--EQRDMVSWNTMISGYASVG 224
Query: 85 EMEAAREVFELM------PERNCFVWSSMVSG---------------------------- 110
M ++ M P++ F S VSG
Sbjct: 225 NMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKT 284
Query: 111 -----YCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEP 165
Y K G + + IP + + W MI+G ++ G E+AL F EM G +
Sbjct: 285 ALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDL 344
Query: 166 DEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVF 225
+ SV+++CAQLG D G +H + T++ L+ L+ MYAKCG L + ++F
Sbjct: 345 SSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIF 404
Query: 226 EGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRP-DAITFLTVLSACAHGGLL 284
E +R++ WNA+ISG+A N + L F M+ ++ D+ T +++L AC+ G
Sbjct: 405 ERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAG-- 462
Query: 285 SEALEVISKMEAYAIEMGIKHYG----CMVDLLGRAGRLK-------------------- 320
AL V + I I+ +VD+ + G L+
Sbjct: 463 --ALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGIL 520
Query: 321 --------------EAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGT 363
E Y MEPN + A+L +C S M +Q +K+ +
Sbjct: 521 IAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSC---SHNGMVQQGLKIFSS 574
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 172/372 (46%), Gaps = 10/372 (2%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHE--L 67
+++++ Y + G + A VFEEM + V W+ MIG ++R G A L +E +
Sbjct: 85 SSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIK 144
Query: 68 KGVVTWTVMVDGYARKGEMEAAREVFELMPERNC--FVWSSMVSGYCKKGSVAEAETIFG 125
G VT M+ G +++ + F ++ +C V +SM++ YCK V +A+ +F
Sbjct: 145 PGPVTLLEMLSGVLEITQLQCLHD-FAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFD 203
Query: 126 RIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDA 185
++ R + WNTMI+GY G L+ MR +G PD+ T + LS + L+
Sbjct: 204 QMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEM 263
Query: 186 GKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAI 245
G+ +H I V+ + + L+ MY KCG + V E +++ CW MISG
Sbjct: 264 GRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMR 323
Query: 246 NGKCREVLEFFGRM--ENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGI 303
G+ + L F M ++ +AI +V+++CA G V + + +
Sbjct: 324 LGRAEKALIVFSEMLQSGSDLSSEAIA--SVVASCAQLGSFDLGASVHGYVLRHGYTLDT 381
Query: 304 KHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGT 363
++ + + G L ++ + +RM E + A++ + D+ A + + +
Sbjct: 382 PALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAIISGYAQNVDLCKALLLFEEMKF 440
Query: 364 NSITRADSHNVL 375
++ + DS V+
Sbjct: 441 KTVQQVDSFTVV 452
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 88/175 (50%), Gaps = 3/175 (1%)
Query: 102 FVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAE 161
++ SS+V+ Y K G +A A +F + R + W MI Y + G A EMR +
Sbjct: 82 YISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQ 141
Query: 162 GFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA 221
G +P T++ +LS ++ L +H + V++ ++++Y KC + +A
Sbjct: 142 GIKPGPVTLLEMLSGVLEITQLQC---LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDA 198
Query: 222 RLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLS 276
+ +F+ QR++ WN MISG+A G E+L+ RM +RPD TF LS
Sbjct: 199 KDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLS 253
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 93/202 (46%), Gaps = 5/202 (2%)
Query: 129 VRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQ 188
+ S + +N+ I +G ++ L F M A PD FT S+L ACA L L G
Sbjct: 8 LNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLS 67
Query: 189 IHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGK 248
IH + + + ++ S LV++YAK G L +AR VFE +R++ W AMI ++ G
Sbjct: 68 IHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGI 127
Query: 249 CREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA-YAIEMGIKHYG 307
E M I+P +T L +LS G L L+ + Y + I
Sbjct: 128 VGEACSLVNEMRFQGIKPGPVTLLEMLS----GVLEITQLQCLHDFAVIYGFDCDIAVMN 183
Query: 308 CMVDLLGRAGRLKEAYDLIKRM 329
M++L + + +A DL +M
Sbjct: 184 SMLNLYCKCDHVGDAKDLFDQM 205
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 137/477 (28%), Positives = 214/477 (44%), Gaps = 92/477 (19%)
Query: 2 PERNVVTWNAMISGYMRNGDMESASLVFEEM------PG--------------------- 34
P RNVV+W ++ISG +NG +A + F EM P
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGK 128
Query: 35 -------KTGVTWSQMIGGFARNGDTAT-----ARRLFDEAPHELKGVVTWTVMVDGYAR 82
K G +G A + T AR+LFDE P + + TW +
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPE--RNLETWNAFISNSVT 186
Query: 83 KGEMEAAREVF------ELMPERNCF---------------------------------V 103
G A E F + P F V
Sbjct: 187 DGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSV 246
Query: 104 WSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGF 163
+ ++ Y K + +E IF + ++ W +++A YVQN E+A + R +
Sbjct: 247 CNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIV 306
Query: 164 EPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARL 223
E +F + SVLSACA + L+ G+ IH + FV S LVDMY KCG + ++
Sbjct: 307 ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQ 366
Query: 224 VFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRM--ENLNIRPDAITFLTVLSACAHG 281
F+ ++N+ N++I G+A G+ L F M P+ +TF+++LSAC+
Sbjct: 367 AFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRA 426
Query: 282 GLLSEALEVISKMEA-YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGA 340
G + +++ M + Y IE G +HY C+VD+LGRAG ++ AY+ IK+MP++P +V GA
Sbjct: 427 GAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGA 486
Query: 341 MLGACRTHSDMKM----AEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMR 393
+ ACR H ++ AE + KL +S ++VLLSN +AA+ +W +A +R
Sbjct: 487 LQNACRMHGKPQLGLLAAENLFKLDPKDS-----GNHVLLSNTFAAAGRWAEANTVR 538
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 161/357 (45%), Gaps = 19/357 (5%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKG 69
N +I+ Y + ESA LV P + V+W+ +I G A+NG +TA F E E G
Sbjct: 46 NYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRRE--G 103
Query: 70 VV----TWTVMVDGYARKGEMEAAREVFELMPE----RNCFVWSSMVSGYCKKGSVAEAE 121
VV T+ A +++ L + + FV S YCK +A
Sbjct: 104 VVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDAR 163
Query: 122 TIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLG 181
+F IP R+LE WN I+ V +G A++AF E R P+ T + L+AC+
Sbjct: 164 KLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWL 223
Query: 182 LLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMIS 241
L+ G Q+H ++ + V +GL+D Y KC + ++ ++F +N W ++++
Sbjct: 224 HLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVA 283
Query: 242 GFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEM 301
+ N + + + R + +VLSACA G+ LE+ + A+A++
Sbjct: 284 AYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACA--GM--AGLELGRSIHAHAVKA 339
Query: 302 GIKHY----GCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMA 354
++ +VD+ G+ G ++++ MP E N +++G + MA
Sbjct: 340 CVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIGGYAHQGQVDMA 395
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 144/316 (45%), Gaps = 9/316 (2%)
Query: 67 LKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGR 126
LK ++ + M R G + AR V L F+ + +++ Y K A +
Sbjct: 13 LKNAISASSM-----RLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRL 67
Query: 127 IPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAG 186
P R++ W ++I+G QNG AL F EMR EG P++FT A A L L G
Sbjct: 68 TPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTG 127
Query: 187 KQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAIN 246
KQIH + ++ FV DMY K +AR +F+ +RN+ WNA IS +
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTD 187
Query: 247 GKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHY 306
G+ RE +E F ++ P++ITF L+AC+ L+ +++ + + +
Sbjct: 188 GRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVC 247
Query: 307 GCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSI 366
++D G+ +++ + + M + + + + H D K + V+ L I
Sbjct: 248 NGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKAS--VLYLRSRKDI 305
Query: 367 TRADSHNVLLSNIYAA 382
++ + ++S++ +A
Sbjct: 306 V--ETSDFMISSVLSA 319
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEM------PGKTGVTWSQMIGGFARNGDTA 54
MPE+N+VT N++I GY G ++ A +FEEM P +T+ ++ +R G
Sbjct: 371 MPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVE 430
Query: 55 TARRLFDEAPHEL---KGVVTWTVMVDGYARKGEMEAAREVFELMP-ERNCFVWSSM 107
++FD G ++ +VD R G +E A E + MP + VW ++
Sbjct: 431 NGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGAL 487
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/336 (33%), Positives = 182/336 (54%), Gaps = 13/336 (3%)
Query: 70 VVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPV 129
V T +V Y G M A +VF+ MPERN W+ M++G G +A ++P
Sbjct: 158 VYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPN 217
Query: 130 RSLEIWNTMIAGYVQNGFGERALQAFEEMRA-EGFEPDEFTVVSVLSACAQLGLLDAGKQ 188
R++ W T+I GY + + A+ F M A + +P+E T++++L A LG L
Sbjct: 218 RTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGS 277
Query: 189 IHHMIEHKRLT-VNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ-----RNICCWNAMISG 242
+H + + + V + L+D YAKCG + +A F+ F + +N+ W MIS
Sbjct: 278 VHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSA---FKFFIEIPNGRKNLVSWTTMISA 334
Query: 243 FAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEA-LEVISKM-EAYAIE 300
FAI+G +E + F ME L ++P+ +T ++VL+AC+HGGL E LE + M Y I
Sbjct: 335 FAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKIT 394
Query: 301 MGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKL 360
+KHYGC+VD+L R GRL+EA + +P+E V +LGAC + D ++AE+V +
Sbjct: 395 PDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRK 454
Query: 361 IGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIM 396
+ + + VL+SNI+ + ++ A++ R M
Sbjct: 455 LMELERSHGGDY-VLMSNIFCGTGRFLDAQRFRKQM 489
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 126/262 (48%), Gaps = 21/262 (8%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
MPERN VTWN MI+G GD E A E+MP +T V+W+ +I G+AR A LF
Sbjct: 184 MPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLF 243
Query: 61 DE-------APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER-----NCFVWSSMV 108
P+E +T ++ G+++ V + +R + V +S++
Sbjct: 244 SRMVACDAIKPNE----ITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLI 299
Query: 109 SGYCKKGSVAEAETIFGRIP--VRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
Y K G + A F IP ++L W TMI+ + +G G+ A+ F++M G +P+
Sbjct: 300 DAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPN 359
Query: 167 EFTVVSVLSACAQLGLLDAG--KQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA-RL 223
T++SVL+AC+ GL + + + M+ ++T + LVDM + G L A ++
Sbjct: 360 RVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKI 419
Query: 224 VFEGFTQRNICCWNAMISGFAI 245
E + W ++ ++
Sbjct: 420 ALEIPIEEKAVVWRMLLGACSV 441
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 211/426 (49%), Gaps = 42/426 (9%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
N + +I Y + G +++A + GK V+W+ MI G+ + FD+
Sbjct: 524 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN--------FDD-- 573
Query: 65 HELKGVVTWTVMVDGYARKGE------------MEAAREVFELMPERNCFVWSS------ 106
K + T+ M+D R E ++A +E ++ + +SS
Sbjct: 574 ---KALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN 630
Query: 107 -MVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEP 165
+V+ Y + G + E+ F + WN +++G+ Q+G E AL+ F M EG +
Sbjct: 631 ALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDN 690
Query: 166 DEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVF 225
+ FT S + A ++ + GKQ+H +I V + L+ MYAKCG + +A F
Sbjct: 691 NNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQF 750
Query: 226 EGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLS 285
+ +N WNA+I+ ++ +G E L+ F +M + N+RP+ +T + VLSAC+H GL+
Sbjct: 751 LEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVD 810
Query: 286 EALEVISKMEA-YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGA 344
+ + M + Y + +HY C+VD+L RAG L A + I+ MP++P+ V +L A
Sbjct: 811 KGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSA 870
Query: 345 CRTHSDMKMAE----QVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGE 400
C H +M++ E +++L +S T VLLSN+YA S+KW+ + R M +
Sbjct: 871 CVVHKNMEIGEFAAHHLLELEPEDSATY-----VLLSNLYAVSKKWDARDLTRQKMKEKG 925
Query: 401 SEKIAG 406
+K G
Sbjct: 926 VKKEPG 931
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 158/333 (47%), Gaps = 10/333 (3%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE-- 62
+ V N +I Y RNG ++ A VF+ + K +W MI G ++N A A RLF +
Sbjct: 221 STVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY 280
Query: 63 ------APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGS 116
P+ V++ ++ ++ V +L + +V +++VS Y G+
Sbjct: 281 VLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL--VLKLGFSSDTYVCNALVSLYFHLGN 338
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+ AE IF + R +NT+I G Q G+GE+A++ F+ M +G EPD T+ S++ A
Sbjct: 339 LISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVA 398
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
C+ G L G+Q+H N + L+++YAKC D+ A F N+ W
Sbjct: 399 CSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLW 458
Query: 237 NAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA 296
N M+ + + R F +M+ I P+ T+ ++L C G L ++ S++
Sbjct: 459 NVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 518
Query: 297 YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM 329
++ ++D+ + G+L A+D++ R
Sbjct: 519 TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 551
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 191/427 (44%), Gaps = 65/427 (15%)
Query: 16 YMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKGVVTWTV 75
Y+ GD+ A VF+EMP +T TW++MI A +R L E +V+ V
Sbjct: 130 YLFKGDLYGAFKVFDEMPERTIFTWNKMIKELA-------SRNLIGEVFGLFVRMVSENV 182
Query: 76 MVDGYARKGEMEAAR------EVFELMPERNCF--------VWSSMVSGYCKKGSVAEAE 121
+ G +EA R +V E + R + V + ++ Y + G V A
Sbjct: 183 TPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLAR 242
Query: 122 TIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLG 181
+F + ++ W MI+G +N A++ F +M G P + SVLSAC ++
Sbjct: 243 RVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIE 302
Query: 182 LLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMIS 241
L+ G+Q+H ++ + + +V + LV +Y G+L++A +F +QR+ +N +I+
Sbjct: 303 SLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLIN 362
Query: 242 GFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEM 301
G + G + +E F RM + PD+ T +++ AC+ G L ++ AY ++
Sbjct: 363 GLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG----QQLHAYTTKL 418
Query: 302 GI----KHYGCMVDLLGRAGRLKEAYD-------------------------------LI 326
G K G +++L + ++ A D +
Sbjct: 419 GFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIF 478
Query: 327 KRMPME---PNETVLGAMLGACRTHSDMKMAEQV-IKLIGTNSITRADSHNVLLSNIYAA 382
++M +E PN+ ++L C D+++ EQ+ ++I TN A +VL+ ++YA
Sbjct: 479 RQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLI-DMYAK 537
Query: 383 SEKWEKA 389
K + A
Sbjct: 538 LGKLDTA 544
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 144/321 (44%), Gaps = 8/321 (2%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFD-------E 62
NA++S Y G++ SA +F M + VT++ +I G ++ G A LF E
Sbjct: 327 NALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 386
Query: 63 APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAET 122
+ DG +G+ A +L N + ++++ Y K + A
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQLHAYTT-KLGFASNNKIEGALLNLYAKCADIETALD 445
Query: 123 IFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGL 182
F V ++ +WN M+ Y + + F +M+ E P+++T S+L C +LG
Sbjct: 446 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD 505
Query: 183 LDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISG 242
L+ G+QIH I +N +V S L+DMYAK G L A + F +++ W MI+G
Sbjct: 506 LELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAG 565
Query: 243 FAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMG 302
+ + L F +M + IR D + +SACA L E ++ ++
Sbjct: 566 YTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSD 625
Query: 303 IKHYGCMVDLLGRAGRLKEAY 323
+ +V L R G+++E+Y
Sbjct: 626 LPFQNALVTLYSRCGKIEESY 646
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 128/306 (41%), Gaps = 43/306 (14%)
Query: 91 EVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGER 150
++ +L + N + + Y KG + A +F +P R++ WN MI
Sbjct: 110 QILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGE 169
Query: 151 ALQAFEEMRAEGFEPDEFTVVSVLSACAQLGL-LDAGKQIHHMIEHKRLTVNPFVLSGLV 209
F M +E P+E T VL AC + D +QIH I ++ L + V + L+
Sbjct: 170 VFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLI 229
Query: 210 DMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAI 269
D+Y++ G + AR VF+G ++ W AMISG + N E + F M L I P
Sbjct: 230 DLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPY 289
Query: 270 TFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKH------------------------ 305
F +VLSAC E+LE+ ++ +++G
Sbjct: 290 AFSSVLSACKK----IESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHI 345
Query: 306 -----------YGCMVDLLGRAGRLKEAYDLIKRMP---MEPNETVLGAMLGACRTHSDM 351
Y +++ L + G ++A +L KRM +EP+ L +++ AC +
Sbjct: 346 FSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTL 405
Query: 352 KMAEQV 357
+Q+
Sbjct: 406 FRGQQL 411
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 87/187 (46%), Gaps = 17/187 (9%)
Query: 153 QAFEEMRAE-----GFEPDEFTVVSVLSACAQL-GLLDAGKQIHHMIEHKRLTVNPFVLS 206
++F+E R + G P+ T+ +L C + G LD G+++H I L N +
Sbjct: 65 ESFQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSE 124
Query: 207 GLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRP 266
L D Y GDL A VF+ +R I WN MI A EV F RM + N+ P
Sbjct: 125 KLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTP 184
Query: 267 DAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGC----MVDLLGRAGRLKEA 322
+ TF VL AC G S A +V+ ++ A + G++ ++DL R G +
Sbjct: 185 NEGTFSGVLEACRGG---SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFV--- 238
Query: 323 YDLIKRM 329
DL +R+
Sbjct: 239 -DLARRV 244
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 204/400 (51%), Gaps = 25/400 (6%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATA----RRLFDEA-- 63
NA++ Y GDM A VF + V+W+ +I G + NG A RRL +
Sbjct: 339 NALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTP 398
Query: 64 -PHELKGVVTWTVMVDGYARKGEMEAAR----EVFELMPERNCFVWSSMVSGYCKKGSVA 118
P E T++ + A + +V +L ER+ FV ++++S Y K
Sbjct: 399 RPDEY----TFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAE 454
Query: 119 EAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACA 178
A+ +F + R + +W MI G+ + G E A+Q F EM E D F++ SV+ AC+
Sbjct: 455 SAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACS 514
Query: 179 QLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNA 238
+ +L G+ H + V LVDMY K G A +F + ++ CWN+
Sbjct: 515 DMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNS 574
Query: 239 MISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYA 298
M+ ++ +G + L FF ++ PDA+T+L++L+AC+H G + + ++M+
Sbjct: 575 MLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQG 634
Query: 299 IEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVL-GAMLGACRTHSDMKM---- 353
I+ G KHY CMV+L+ +AG + EA +LI++ P N+ L +L AC ++++
Sbjct: 635 IKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYA 694
Query: 354 AEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMR 393
AEQ++KL ++ T ++LLSN+YA + +WE +MR
Sbjct: 695 AEQILKLDPEDTAT-----HILLSNLYAVNGRWEDVAEMR 729
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 138/289 (47%), Gaps = 14/289 (4%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTAT-ARRLFDEAPHEL- 67
N +IS Y+R G +E A VF++MP + V+++ + ++RN D A+ A L E
Sbjct: 136 NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYV 195
Query: 68 -KGVVTWTVMVDGYARKGEM----EAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAET 122
T+T +V A ++ ++ +L N V +S++ Y G + A
Sbjct: 196 KPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARR 255
Query: 123 IFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGL 182
IF + R WNTMI G ++N E L F M G +P +FT VL+ C++LG
Sbjct: 256 IFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGS 315
Query: 183 LDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISG 242
GK IH I + + + L+DMY CGD+ A VF N+ WN++ISG
Sbjct: 316 YSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISG 375
Query: 243 FAINGKCREVLEFFGRMENLNI-RPDAITFLTVLSACA------HGGLL 284
+ NG + + + R+ ++ RPD TF +SA A HG LL
Sbjct: 376 CSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLL 424
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 168/355 (47%), Gaps = 16/355 (4%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
NVV +++ Y GD+ESA +F+ + + V W+ MI G +N F
Sbjct: 233 NVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNML 292
Query: 65 HELKGV----VTWTVMVDGYARKGEMEAAREVFELMPERNCF----VWSSMVSGYCKKGS 116
+ GV T++++++G ++ G + + + + + ++++ YC G
Sbjct: 293 --MSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGD 350
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEE-MRAEGFEPDEFTVVSVLS 175
+ EA +FGRI +L WN++I+G +NGFGE+A+ + +R PDE+T + +S
Sbjct: 351 MREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAIS 410
Query: 176 ACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICC 235
A A+ GK +H + + FV + L+ MY K + +A+ VF+ +R++
Sbjct: 411 ATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVL 470
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLL--SEALEVISK 293
W MI G + G ++FF M R D + +V+ AC+ +L E ++
Sbjct: 471 WTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAI 530
Query: 294 MEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTH 348
+ M + G +VD+ G+ G+ + A + I + P+ +MLGA H
Sbjct: 531 RTGFDCVMSV--CGALVDMYGKNGKYETA-ETIFSLASNPDLKCWNSMLGAYSQH 582
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 109/220 (49%), Gaps = 6/220 (2%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
ER+V ++S Y +N + ESA VF+ M + V W++MI G +R G++ A + F E
Sbjct: 434 ERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIE 493
Query: 63 APHELKGVVTWTV-MVDGYARKGEMEAAREVFELMPERNCF-----VWSSMVSGYCKKGS 116
E +++ V G M EVF + R F V ++V Y K G
Sbjct: 494 MYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGK 553
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
AETIF L+ WN+M+ Y Q+G E+AL FE++ GF PD T +S+L+A
Sbjct: 554 YETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAA 613
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCG 216
C+ G GK + + ++ + + S +V++ +K G
Sbjct: 614 CSHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAG 653
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 156/354 (44%), Gaps = 21/354 (5%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGF----------ARNGDTATARRL 59
N +IS Y+R +E A VF++MP + VT + F ++ + + +
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 60 FDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELM-------PERNCFVWSSMVSGYC 112
F +E+ V + ++ AR++ L+ + + ++++S Y
Sbjct: 86 FFMPLNEIASSVVE--LTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYV 143
Query: 113 KKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQN-GFGERALQAFEEMRAEGFEPDEFTVV 171
+ GS+ +A +F ++P R++ +N + + Y +N F A M E +P+ T
Sbjct: 144 RCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFT 203
Query: 172 SVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQR 231
S++ CA L + G ++ I + N V + ++ MY+ CGDL +AR +F+ R
Sbjct: 204 SLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNR 263
Query: 232 NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVI 291
+ WN MI G N K + L FF M + P T+ VL+ C+ G S +
Sbjct: 264 DAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIH 323
Query: 292 SKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGAC 345
+++ + ++D+ G ++EA+ + R+ PN +++ C
Sbjct: 324 ARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRI-HNPNLVSWNSIISGC 376
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 182/355 (51%), Gaps = 40/355 (11%)
Query: 20 GDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF-----------DEA--PHE 66
G+ + ASLVF ++ + TW+ MI + N A LF D+ P
Sbjct: 66 GETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFV 125
Query: 67 LKG-------------------------VVTWTVMVDGYARKGEMEAAREVFELMPERNC 101
+K V ++D Y + G+ ++ R+VF+ MP R+
Sbjct: 126 IKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSI 185
Query: 102 FVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAE 161
W++M+ G + AE +F ++P+R++ W MI YV+N + A Q F M+ +
Sbjct: 186 VSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVD 245
Query: 162 GFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA 221
+P+EFT+V++L A QLG L G+ +H ++ F+ + L+DMY+KCG L +A
Sbjct: 246 DVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDA 305
Query: 222 RLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENL-NIRPDAITFLTVLSACAH 280
R VF+ +++ WN+MI+ ++G E L F ME ++ PDAITF+ VLSACA+
Sbjct: 306 RKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACAN 365
Query: 281 GGLLSEALEVISKM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPN 334
G + + L ++M + Y I +H CM+ LL +A +++A +L++ M +P+
Sbjct: 366 TGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 102/197 (51%), Gaps = 15/197 (7%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
MP R++V+W M+ G + N ++SA +VF +MP + V+W+ MI + +N A +LF
Sbjct: 180 MPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLF 239
Query: 61 ------DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSG 110
D P+E T ++ + G + R V + + +CF+ ++++
Sbjct: 240 RRMQVDDVKPNEF----TIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDM 295
Query: 111 YCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEG-FEPDEFT 169
Y K GS+ +A +F + +SL WN+MI +G GE AL FEEM E EPD T
Sbjct: 296 YSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAIT 355
Query: 170 VVSVLSACAQLGLLDAG 186
V VLSACA G + G
Sbjct: 356 FVGVLSACANTGNVKDG 372
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 12/162 (7%)
Query: 174 LSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNI 233
L C+ L KQIH I LT + ++ L+ + + G+ A LVF +
Sbjct: 27 LRTCSNFSQL---KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPST 83
Query: 234 CCWNAMISGFAINGKCRE-VLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVIS 292
WN MI ++N K RE +L F M + + D TF V+ AC L S ++ + +
Sbjct: 84 FTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKAC----LASSSIRLGT 139
Query: 293 KMEAYAIEMG----IKHYGCMVDLLGRAGRLKEAYDLIKRMP 330
++ AI+ G + ++DL + G+ + +MP
Sbjct: 140 QVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMP 181
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 190/369 (51%), Gaps = 10/369 (2%)
Query: 2 PERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFD 61
PE+ ++ N ++ +++ G + A +F+E+P + ++ +I GF G+ A LF
Sbjct: 156 PEQYMM--NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFK 213
Query: 62 EAPHELKGVVTWT--VMVDGYARKGEMEAAREV----FELMPERNCFVWSSMVSGYCKKG 115
EL T T VM+ A G + +++ +L N FV ++ Y K G
Sbjct: 214 MMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCG 273
Query: 116 SVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLS 175
+ +A F +P ++ WN +IAGY +G+ E AL +MR G D+FT+ ++
Sbjct: 274 DIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIR 333
Query: 176 ACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICC 235
+L L+ KQ H + + LVD Y+K G + AR VF+ ++NI
Sbjct: 334 ISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIIS 393
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM- 294
WNA++ G+A +G+ + ++ F +M N+ P+ +TFL VLSACA+ GL + E+ M
Sbjct: 394 WNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMS 453
Query: 295 EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMA 354
E + I+ HY CM++LLGR G L EA I+R P++ + A+L ACR ++++
Sbjct: 454 EVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELG 513
Query: 355 EQVI-KLIG 362
V KL G
Sbjct: 514 RVVAEKLYG 522
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 154/348 (44%), Gaps = 17/348 (4%)
Query: 34 GKTGVTWSQMIGGFARNGDTATARRLFD--EAPHELK-GVVTWTVMVDGYARKGEMEAAR 90
K+GVT I A LF+ E K GV T+ +V+ R + +
Sbjct: 84 SKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVK 143
Query: 91 EVFELM------PERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQ 144
V+ M PE+ ++ + ++ + K G + +A +F IP R+L + ++I+G+V
Sbjct: 144 RVYGFMMSNGFEPEQ--YMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVN 201
Query: 145 NGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFV 204
G A + F+ M E + + T +L A A LG + GKQ+H + N FV
Sbjct: 202 FGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFV 261
Query: 205 LSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNI 264
GL+DMY+KCGD+ +AR FE ++ WN +I+G+A++G E L M + +
Sbjct: 262 SCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGV 321
Query: 265 RPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYD 324
D T ++ L + + + E I +VD + GR+ A
Sbjct: 322 SIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARY 381
Query: 325 LIKRMPMEPNETVLGAMLGACRTH----SDMKMAEQVIKL-IGTNSIT 367
+ ++P N A++G H +K+ E++I + N +T
Sbjct: 382 VFDKLP-RKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVT 428
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 39/196 (19%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
MPE+ V WN +I+GY +G E A + +M +GV+ Q T A+
Sbjct: 285 MPEKTTVAWNNVIAGYALHGYSEEALCLLYDMR-DSGVSIDQFTLSIMIRISTKLAKLEL 343
Query: 61 DEAPHEL-------KGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCK 113
+ H +V T +VD Y++ G ++ AR VF+ +P +N W++++ G
Sbjct: 344 TKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGG--- 400
Query: 114 KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSV 173
Y +G G A++ FE+M A P+ T ++V
Sbjct: 401 ----------------------------YANHGRGTDAVKLFEKMIAANVAPNHVTFLAV 432
Query: 174 LSACAQLGLLDAGKQI 189
LSACA GL + G +I
Sbjct: 433 LSACAYSGLSEQGWEI 448
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 131/434 (30%), Positives = 200/434 (46%), Gaps = 60/434 (13%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEM------PG------------------------ 34
+V TW AMISG + NG A +F +M P
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVH 375
Query: 35 ----KTGVTWSQMIGG-----FARNGDTATARRLFDEAPHELKGVVTWTVMVDGYARKGE 85
K G ++G +++ G AR++FD + K V TW M+ GY + G
Sbjct: 376 SIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKN--KDVYTWNSMITGYCQAGY 433
Query: 86 MEAAREVFELMPERNC----FVWSSMVSGYCKKGSVAEAETIFGRIP-----VRSLEIWN 136
A E+F M + N W++M+SGY K G EA +F R+ R+ WN
Sbjct: 434 CGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWN 493
Query: 137 TMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHK 196
+IAGY+QNG + AL+ F +M+ F P+ T++S+L ACA L ++IH + +
Sbjct: 494 LIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRR 553
Query: 197 RLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFF 256
L V + L D YAK GD+ +R +F G ++I WN++I G+ ++G L F
Sbjct: 554 NLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALF 613
Query: 257 GRMENLNIRPDAITFLTVLSACAHGGLLSEALEVI-SKMEAYAIEMGIKHYGCMVDLLGR 315
+M+ I P+ T +++ A G + E +V S Y I ++H MV L GR
Sbjct: 614 NQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGR 673
Query: 316 AGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKM----AEQVIKLIGTNSITRADS 371
A RL+EA I+ M ++ + + L CR H D+ M AE + L N+ T +
Sbjct: 674 ANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATES-- 731
Query: 372 HNVLLSNIYAASEK 385
++S IYA K
Sbjct: 732 ---IVSQIYALGAK 742
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 195/401 (48%), Gaps = 36/401 (8%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHE--L 67
N++++ Y + G+++ A+ F M + + W+ ++ + +NG A L E E
Sbjct: 220 NSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGIS 279
Query: 68 KGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRI 127
G+VTW +++ GY + G+ +AA +LM + F G A+ T
Sbjct: 280 PGLVTWNILIGGYNQLGKCDAA---MDLMQKMETF------------GITADVFT----- 319
Query: 128 PVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGK 187
W MI+G + NG +AL F +M G P+ T++S +SAC+ L +++ G
Sbjct: 320 -------WTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGS 372
Query: 188 QIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAING 247
++H + + V + LVDMY+KCG L +AR VF+ +++ WN+MI+G+ G
Sbjct: 373 EVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAG 432
Query: 248 KCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYA-IEMGIKHY 306
C + E F RM++ N+RP+ IT+ T++S G EA+++ +ME ++ +
Sbjct: 433 YCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATW 492
Query: 307 GCMVDLLGRAGRLKEAYDLIKRMPME---PNETVLGAMLGACRTHSDMKMAEQVIKLIGT 363
++ + G+ EA +L ++M PN + ++L AC KM ++ +
Sbjct: 493 NLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLR 552
Query: 364 NSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKI 404
++ + L++ YA S E + R I + E++ I
Sbjct: 553 RNLDAIHAVKNALTDTYAKSGDIEYS---RTIFLGMETKDI 590
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 162/358 (45%), Gaps = 16/358 (4%)
Query: 47 FARNGDTATARRLFDEAPHELKGV--VTWTVMVDGYARKGEMEAAREV---FELMPERNC 101
RNG A + D + V T+ +++ G + R + F L E +
Sbjct: 56 LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTEPDV 115
Query: 102 FVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAE 161
FV + ++S Y K G +A+A +F + R+L W+ MI Y + + F M +
Sbjct: 116 FVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKD 175
Query: 162 GFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA 221
G PD+F +L CA G ++AGK IH ++ ++ V + ++ +YAKCG+L A
Sbjct: 176 GVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFA 235
Query: 222 RLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHG 281
F +R++ WN+++ + NGK E +E ME I P +T+ ++
Sbjct: 236 TKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQL 295
Query: 282 GLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME---PNETVL 338
G A++++ KME + I + + M+ L G +A D+ ++M + PN +
Sbjct: 296 GKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTI 355
Query: 339 GAMLGACRTHSDMKMAEQV----IKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKM 392
+ + AC + +V +K+ + + +S L ++Y+ K E A K+
Sbjct: 356 MSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNS----LVDMYSKCGKLEDARKV 409
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 143/349 (40%), Gaps = 90/349 (25%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEM------PGKTGVTWSQMIGGFARNGDTA 54
M ER+V+ WN+++ Y +NG E A + +EM PG VTW+ +IGG+ + G
Sbjct: 242 MRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGL--VTWNILIGGYNQLGKCD 299
Query: 55 TARRLFD--EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELM------PE-------- 98
A L E V TWT M+ G G A ++F M P
Sbjct: 300 AAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAV 359
Query: 99 -------------------------RNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLE 133
+ V +S+V Y K G + +A +F + + +
Sbjct: 360 SACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVY 419
Query: 134 IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMI 193
WN+MI GY Q G+ +A + F M+ P+ T +++S + G D G+ +
Sbjct: 420 TWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNG--DEGEAM---- 473
Query: 194 EHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVL 253
D++ R+ +G QRN WN +I+G+ NGK E L
Sbjct: 474 ----------------DLF--------QRMEKDGKVQRNTATWNLIIAGYIQNGKKDEAL 509
Query: 254 EFFGRMENLNIRPDAITFLTVLSACA-----------HGGLLSEALEVI 291
E F +M+ P+++T L++L ACA HG +L L+ I
Sbjct: 510 ELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAI 558
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 200/414 (48%), Gaps = 17/414 (4%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE-- 62
N + ++ Y R G + SA VF+++ +W+ +I G A NG A +F +
Sbjct: 304 NAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMR 363
Query: 63 ----APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVA 118
P + A M+ + + + V +S+++ Y +
Sbjct: 364 SSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLY 423
Query: 119 EAETIFGRIPVRSLEI-WNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSAC 177
+F + + WNT++ +Q+ L+ F+ M EPD T+ ++L C
Sbjct: 424 CCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGC 483
Query: 178 AQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWN 237
++ L G Q+H L F+ +GL+DMYAKCG L AR +F+ R++ W+
Sbjct: 484 VEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWS 543
Query: 238 AMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA- 296
+I G+A +G E L F M++ I P+ +TF+ VL+AC+H GL+ E L++ + M+
Sbjct: 544 TLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTE 603
Query: 297 YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRT----HSDMK 352
+ I +H C+VDLL RAGRL EA I M +EP+ V +L AC+T H K
Sbjct: 604 HGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQK 663
Query: 353 MAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
AE ++K+ NS +VLL +++A+S WE A +R M + +KI G
Sbjct: 664 AAENILKIDPFNSTA-----HVLLCSMHASSGNWENAALLRSSMKKHDVKKIPG 712
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 169/351 (48%), Gaps = 7/351 (1%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
+ + N ++S Y + G + A VF+ MP + V+++ +I G+++NG A A RL+ +
Sbjct: 101 DTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKML 160
Query: 65 HE--LKGVVTWTVMVDGYARKGEMEAAR----EVFELMPERNCFVWSSMVSGYCKKGSVA 118
E + + ++ A ++ + +V +L + +++++ Y + ++
Sbjct: 161 QEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMS 220
Query: 119 EAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEG-FEPDEFTVVSVLSAC 177
+A +F IP++ L W+++IAG+ Q GF AL +EM + G F P+E+ S L AC
Sbjct: 221 DASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKAC 280
Query: 178 AQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWN 237
+ L D G QIH + L N L DMYA+CG L +AR VF+ + + WN
Sbjct: 281 SSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWN 340
Query: 238 AMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAY 297
+I+G A NG E + F +M + PDAI+ ++L A LS+ +++ S + +
Sbjct: 341 VIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKW 400
Query: 298 AIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTH 348
+ ++ + L ++L + + +L AC H
Sbjct: 401 GFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQH 451
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 187/448 (41%), Gaps = 77/448 (17%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFD-EA 63
+++ NA+I+ Y+R M AS VF +P K ++WS +I GF++ G F+ EA
Sbjct: 202 HLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG--------FEFEA 253
Query: 64 PHELKGVVTWTVM-VDGYARKGEMEAAREVFELMPER---------------NCFVWSSM 107
LK ++++ V + Y ++A + L P+ N S+
Sbjct: 254 LSHLKEMLSFGVFHPNEYIFGSSLKACSSL--LRPDYGSQIHGLCIKSELAGNAIAGCSL 311
Query: 108 VSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDE 167
Y + G + A +F +I WN +IAG NG+ + A+ F +MR+ GF PD
Sbjct: 312 CDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDA 371
Query: 168 FTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEG 227
++ S+L A + L G QIH I + V + L+ MY C DL +FE
Sbjct: 372 ISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFED 431
Query: 228 F-TQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSE 286
F + WN +++ + + E+L F M PD IT +L C
Sbjct: 432 FRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVE----IS 487
Query: 287 ALEVISKMEAYAIEMGIKH----YGCMVDLLGRAGRL----------------------- 319
+L++ S++ Y+++ G+ ++D+ + G L
Sbjct: 488 SLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIV 547
Query: 320 --------KEAYDLIKRMP---MEPNETVLGAMLGACRTHSDMKMAEQVIKLIGT----N 364
+EA L K M +EPN +L AC S + + E+ +KL T +
Sbjct: 548 GYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTAC---SHVGLVEEGLKLYATMQTEH 604
Query: 365 SITRADSHNVLLSNIYAASEKWEKAEKM 392
I+ H + ++ A + + +AE+
Sbjct: 605 GISPTKEHCSCVVDLLARAGRLNEAERF 632
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 128/271 (47%), Gaps = 20/271 (7%)
Query: 72 TWTVMVDGYARKGEMEAAREVFELMPERNC----FVWSSMVSGYCKKGSVAEAETIFGRI 127
T+ ++ + + R++ + + NC + + ++S Y K GS+ +A +F +
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 128 PVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGK 187
P R+L + ++I GY QNG G A++ + +M E PD+F S++ ACA + GK
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 188 QIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAING 247
Q+H + + + + L+ MY + + +A VF G +++ W+++I+GF+ G
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 248 KCREVLEFFGRMENLNI-RPDAITFLTVLSACA-----HGGLLSEALEVISKMEAYAIEM 301
E L M + + P+ F + L AC+ G L + S++ AI
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIA- 307
Query: 302 GIKHYGC-MVDLLGRAGRLKEA---YDLIKR 328
GC + D+ R G L A +D I+R
Sbjct: 308 -----GCSLCDMYARCGFLNSARRVFDQIER 333
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 125/417 (29%), Positives = 211/417 (50%), Gaps = 18/417 (4%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
E ++ A+I Y + G + + VFE + K V+W+ ++ GF RNG A +F
Sbjct: 116 ETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAA 175
Query: 63 APHELKGVVTWTV--MVDGYARKGEMEAAREVFELM--PERNCFVW-SSMVSGYCKKGSV 117
E + +T+ +V A ++ ++V ++ R+ V ++M+S Y G +
Sbjct: 176 MYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLI 235
Query: 118 AEAETIFGRIPVRSLEI-WNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
EA ++ + V + E+ N++I+G ++N + A R P+ + S L+
Sbjct: 236 NEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSLAG 290
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
C+ L GKQIH + + + +GL+DMY KCG +V AR +F +++ W
Sbjct: 291 CSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSW 350
Query: 237 NAMISGFAINGKCREVLEFFGRM--ENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM 294
+MI +A+NG + LE F M E + P+++TFL V+SACAH GL+ E E M
Sbjct: 351 TSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMM 410
Query: 295 -EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAM----LGACRTHS 349
E Y + G +HY C +D+L +AG +E + L++RM N+++ A+ L AC +
Sbjct: 411 KEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNM 470
Query: 350 DMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
D+ E V + + + S VL+SN YAA KW+ E++RG + + K AG
Sbjct: 471 DLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAG 527
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 123/276 (44%), Gaps = 43/276 (15%)
Query: 118 AEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSAC 177
A+ +F +P R L N+ ++ ++++G L F ++ + T VL AC
Sbjct: 35 THADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGAC 94
Query: 178 AQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWN 237
+ L + G+Q+H ++ + + L+DMY+K G LV++ VFE ++++ WN
Sbjct: 95 SLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWN 154
Query: 238 AMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA-----------HG----- 281
A++SGF NGK +E L F M + T +V+ CA H
Sbjct: 155 ALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVT 214
Query: 282 ------------------GLLSEALEVISKMEAYAIEMGIKHY--GCMVDLLGRAGRLKE 321
GL++EA++V + + + E+ + GC+ R KE
Sbjct: 215 GRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCI-----RNRNYKE 269
Query: 322 AYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQV 357
A+ L+ R PN VL + L C +SD+ + +Q+
Sbjct: 270 AFLLMSR--QRPNVRVLSSSLAGCSDNSDLWIGKQI 303
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 143/320 (44%), Gaps = 27/320 (8%)
Query: 25 ASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF---DEAPHELKGVVTWTVMVDGYA 81
A +F+E+P + + + + R+G+ LF A +L T+T ++ +
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSH-TFTPVLGACS 95
Query: 82 RKGEMEAAREVFELM----PERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNT 137
E R+V LM E ++++ Y K G + ++ +F + + L WN
Sbjct: 96 LLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNA 155
Query: 138 MIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKR 197
+++G+++NG G+ AL F M E E EFT+ SV+ CA L +L GKQ+H M+
Sbjct: 156 LLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVV--- 212
Query: 198 LTVNPFVLSG--LVDMYAKCGDLVNARLVFEGF-TQRNICCWNAMISGFAINGKCREVLE 254
+T V+ G ++ Y+ G + A V+ + N++ISG N +E
Sbjct: 213 VTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFL 272
Query: 255 FFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGI----KHYGCMV 310
R RP+ + L+ C+ + L + ++ A+ G K ++
Sbjct: 273 LMSRQ-----RPNVRVLSSSLAGCSD----NSDLWIGKQIHCVALRNGFVSDSKLCNGLM 323
Query: 311 DLLGRAGRLKEAYDLIKRMP 330
D+ G+ G++ +A + + +P
Sbjct: 324 DMYGKCGQIVQARTIFRAIP 343
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 170/301 (56%), Gaps = 11/301 (3%)
Query: 103 VWSSMVSGYCKKGSVAEAETIFGRIPVR-SLEIWNTMIAGYVQNGFGERALQAFEEMRAE 161
+ +S+V Y G V A +F P + ++ +W MI+ Y +N A++ F+ M AE
Sbjct: 102 IQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAE 161
Query: 162 GFEPDEFTVVSVLSACAQLGLLDAGKQIHH--MIEHKRLTVNPFVLSGLVDMYAKCGDLV 219
E D V LSACA LG + G++I+ + +RL ++ + + L++MY K G+
Sbjct: 162 KIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETE 221
Query: 220 NARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLN------IRPDAITFLT 273
AR +F+ ++++ + +MI G+A+NG+ +E LE F +M+ ++ I P+ +TF+
Sbjct: 222 KARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIG 281
Query: 274 VLSACAHGGLLSEALEVISKM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME 332
VL AC+H GL+ E M Y ++ H+GCMVDL R+G LK+A++ I +MP++
Sbjct: 282 VLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIK 341
Query: 333 PNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKM 392
PN + +LGAC H ++++ E+V + I + V LSNIYA+ W++ KM
Sbjct: 342 PNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDY-VALSNIYASKGMWDEKSKM 400
Query: 393 R 393
R
Sbjct: 401 R 401
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 120/255 (47%), Gaps = 19/255 (7%)
Query: 11 AMISGYMRNGDMESASLVFEEMPGKTG-VTWSQMIGGFARNGDTATARRLFD--EAPH-E 66
+++ Y GD++ A VF+E P K V W+ MI + N ++ A LF EA E
Sbjct: 105 SLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIE 164
Query: 67 LKGVVTWTVMVDGYARKGEMEAAREVFELMPER------NCFVWSSMVSGYCKKGSVAEA 120
L GV+ TV + A G ++ E++ +R + + +S+++ Y K G +A
Sbjct: 165 LDGVIV-TVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKA 223
Query: 121 ETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRA------EGFEPDEFTVVSVL 174
+F + + + +MI GY NG + +L+ F++M+ P++ T + VL
Sbjct: 224 RKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVL 283
Query: 175 SACAQLGLLDAGKQ-IHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNAR-LVFEGFTQRN 232
AC+ GL++ GK+ MI L +VD++ + G L +A + + + N
Sbjct: 284 MACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPN 343
Query: 233 ICCWNAMISGFAING 247
W ++ +++G
Sbjct: 344 TVIWRTLLGACSLHG 358
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 13/236 (5%)
Query: 115 GSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEE-MRAEGFEPDEFTVVSV 173
G + + ++ +SL+ N + Y+++G +AL F R D F+V+
Sbjct: 12 GVINKFDSFLLHFHTKSLK-SNHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFA 70
Query: 174 L--SACAQLGLLDAGKQIHHMIEHKRLTVNPFVL--SGLVDMYAKCGDLVNARLVF-EGF 228
+ S+ + LD G+QIH ++ ++L N + + LV Y+ GD+ AR VF E
Sbjct: 71 IKVSSAQKASSLD-GRQIHALV--RKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETP 127
Query: 229 TQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEAL 288
++NI W AMIS + N E +E F RME I D + LSACA G +
Sbjct: 128 EKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGE 187
Query: 289 EVISK--MEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAML 342
E+ S+ + M + ++++ ++G ++A L M + T +M+
Sbjct: 188 EIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDE-SMRKDVTTYTSMI 242
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 116/259 (44%), Gaps = 26/259 (10%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF------DEA 63
N++++ Y+++G+ E A +F+E K T++ MI G+A NG + LF D++
Sbjct: 208 NSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQS 267
Query: 64 PHEL--KGVVTWTVMVDGYARKGEMEAAREVFE-------LMPERNCFVWSSMVSGYCKK 114
+ VT+ ++ + G +E + F+ L P F MV +C+
Sbjct: 268 QDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHF--GCMVDLFCRS 325
Query: 115 GSVAEAETIFGRIPVR-SLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV--- 170
G + +A ++P++ + IW T++ +G E EE++ FE D V
Sbjct: 326 GHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELG----EEVQRRIFELDRDHVGDY 381
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFV-LSGLVDMYAKCGDLVNARLVFEGFT 229
V++ + A G+ D ++ + +R+ ++ L +++ + D + +L+ +
Sbjct: 382 VALSNIYASKGMWDEKSKMRDRVRKRRMPGKSWIELGSIINEFVSGPDNNDEQLMMGEIS 441
Query: 230 QRNICCWNAMISGFAINGK 248
+ C + M S + GK
Sbjct: 442 EVLRCLVSCMTSFDCVIGK 460
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 184 bits (468), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 208/414 (50%), Gaps = 25/414 (6%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGD-----TATAR 57
E ++V A++ Y +NG ++ A +F MP K VT++ MI GF + + ++ A
Sbjct: 284 EFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAF 343
Query: 58 RLFDEAPHELKGV----VTWTVMVDGYARKGEMEAAREVFELMPERNC----FVWSSMVS 109
+LF + + +G+ T++V++ + +E R++ L+ + N F+ S+++
Sbjct: 344 KLFMDM--QRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIE 401
Query: 110 GYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFT 169
Y GS + F + + W +MI +VQN E A F ++ + P+E+T
Sbjct: 402 LYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYT 461
Query: 170 VVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT 229
V ++SACA L +G+QI + V + + MYAK G++ A VF
Sbjct: 462 VSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQ 521
Query: 230 QRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALE 289
++ ++AMIS A +G E L F M+ I+P+ FL VL AC HGGL+++ L+
Sbjct: 522 NPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLK 581
Query: 290 VISKME-AYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTH 348
M+ Y I KH+ C+VDLLGR GRL +A +LI + + A+L +CR +
Sbjct: 582 YFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVY 641
Query: 349 SD----MKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVD 398
D ++AE++++L A VLL NIY S AE++R +M D
Sbjct: 642 KDSVIGKRVAERLMEL-----EPEASGSYVLLHNIYNDSGVNSSAEEVRELMRD 690
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 116/235 (49%), Gaps = 4/235 (1%)
Query: 111 YCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
YCK + A +F R+P R++ +N++I+GY Q GF E+A++ F E R + D+FT
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ 230
L C + LD G+ +H ++ L+ F+++ L+DMY+KCG L A +F+ +
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE 211
Query: 231 RNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA---HGGLLSEA 287
R+ WN++ISG+ G E L +M + +VL AC + G + +
Sbjct: 212 RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKG 271
Query: 288 LEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAML 342
+ + +E I ++D+ + G LKEA L MP N AM+
Sbjct: 272 MAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMP-SKNVVTYNAMI 325
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 166/385 (43%), Gaps = 60/385 (15%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEM--PGKTGVTWS----------QMIGGFARN 50
ER+ V+WN++ISGY+R G E + +M G T++ + GF
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 51 G-----DTATARRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWS 105
G TA FD +V T ++D YA+ G ++ A ++F LMP +N ++
Sbjct: 271 GMAIHCYTAKLGMEFD--------IVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYN 322
Query: 106 SMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEP 165
+M+SG+ + + + + A + F +M+ G EP
Sbjct: 323 AMISGFLQMDEITDEAS--------------------------SEAFKLFMDMQRRGLEP 356
Query: 166 DEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVF 225
T VL AC+ L+ G+QIH +I + F+ S L+++YA G + F
Sbjct: 357 SPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCF 416
Query: 226 EGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLS 285
++++I W +MI N + + F ++ + +IRP+ T ++SACA LS
Sbjct: 417 ASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALS 476
Query: 286 EALEVISKMEAYAIEMGIKHYGCM----VDLLGRAGRLKEAYDLIKRMPMEPNETVLGAM 341
+++ YAI+ GI + + + + ++G + A + + P+ AM
Sbjct: 477 SG----EQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEV-QNPDVATYSAM 531
Query: 342 LGACRTHSDMKMAEQVIKLIGTNSI 366
+ + H A + + + T+ I
Sbjct: 532 ISSLAQHGSANEALNIFESMKTHGI 556
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 166/397 (41%), Gaps = 62/397 (15%)
Query: 16 YMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKGVVTWTV 75
Y + ++ A +F+ MP + ++++ +I G+ + G A LF EA +
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREA-------NL 144
Query: 76 MVDGYARKGEM-----EAAREVFELMP--------ERNCFVWSSMVSGYCKKGSVAEAET 122
+D + G + ++ EL+ + F+ + ++ Y K G + +A +
Sbjct: 145 KLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMS 204
Query: 123 IFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACA---Q 179
+F R R WN++I+GYV+ G E L +M +G + + SVL AC
Sbjct: 205 LFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLN 264
Query: 180 LGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAM 239
G ++ G IH + + V + L+DMYAK G L A +F +N+ +NAM
Sbjct: 265 EGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAM 324
Query: 240 ISGF-----AINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEV---I 291
ISGF + E + F M+ + P TF VL AC+ L ++ I
Sbjct: 325 ISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALI 384
Query: 292 SK-------------MEAYAI---------------EMGIKHYGCMVDLLGRAGRLKEAY 323
K +E YA+ + I + M+D + +L+ A+
Sbjct: 385 CKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAF 444
Query: 324 DLIKRM---PMEPNETVLGAMLGACRTHSDMKMAEQV 357
DL +++ + P E + M+ AC + + EQ+
Sbjct: 445 DLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQI 481
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 120 AETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQ 179
A+T F I SL T+I V G G R L + + + + + + ++ A+
Sbjct: 7 AKTFFNNIAQDSLV---TLITKRV--GLGYRFLSSLCQPKNTALDSEGYKIL--FQTAAK 59
Query: 180 LGLLDAGKQIH-HMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNA 238
G + GK H HMI+ +L+ L++MY KC +L AR +F+ +RNI +N+
Sbjct: 60 SGSVVLGKLAHGHMIKSSLNPCLY-LLNNLLNMYCKCRELGFARQLFDRMPERNIISFNS 118
Query: 239 MISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHG-----GLLSEALEVISK 293
+ISG+ G + +E F N++ D T+ L C G L L V++
Sbjct: 119 LISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNG 178
Query: 294 MEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKR 328
+ + + ++D+ + G+L +A L R
Sbjct: 179 LSQQVFLINV-----LIDMYSKCGKLDQAMSLFDR 208
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/405 (31%), Positives = 200/405 (49%), Gaps = 19/405 (4%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
+ T N ++ Y++ ++ +A +F+EM V+W+ +I G+ G A +F +
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKM- 121
Query: 65 HELKGV----VTWTVMVDGYARKGEMEAAREVFELMP----ERNCFVWSSMVSGYCKKGS 116
HE + V T+ + + E + + + RN V SS+V Y K
Sbjct: 122 HEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCND 181
Query: 117 VAEAETIFGRI--PVRSLEIWNTMIAGYVQNGFGERALQAFEEMRA--EGFEPDEFTVVS 172
V A +F + R++ W +MI Y QN G A++ F A ++F + S
Sbjct: 182 VETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLAS 241
Query: 173 VLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRN 232
V+SAC+ LG L GK H ++ N V + L+DMYAKCG L A +F +
Sbjct: 242 VISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHS 301
Query: 233 ICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVIS 292
+ + +MI A +G ++ F M I P+ +T L VL AC+H GL++E LE +S
Sbjct: 302 VISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLS 361
Query: 293 KM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVL--GAMLGACRTHS 349
M E Y + +HY C+VD+LGR GR+ EAY+L K + + + L GA+L A R H
Sbjct: 362 LMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHG 421
Query: 350 DMKMAEQVIK-LIGTNSITRADSHNVLLSNIYAASEKWEKAEKMR 393
+++ + K LI +N + S + LSN YA S WE +E +R
Sbjct: 422 RVEIVSEASKRLIQSNQ--QVTSAYIALSNAYAVSGGWEDSESLR 464
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 139/348 (39%), Gaps = 85/348 (24%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEM-------PG------------------- 34
M E NVV+W ++ISGY G ++A +F++M P
Sbjct: 90 MCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRI 149
Query: 35 --------------KTGVTWSQMIGGFARNGDTATARRLFDEAPHELKGVVTWTVMVDGY 80
+ V S ++ + + D TARR+FD + VV+WT M+ Y
Sbjct: 150 GKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAY 209
Query: 81 ARKGEMEAAREVFELMP-----------------------------------------ER 99
A+ A E+F E
Sbjct: 210 AQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYES 269
Query: 100 NCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMR 159
N V +S++ Y K GS++ AE IF RI S+ + +MI ++G GE A++ F+EM
Sbjct: 270 NTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMV 329
Query: 160 AEGFEPDEFTVVSVLSACAQLGLLDAG-KQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDL 218
A P+ T++ VL AC+ GL++ G + + M E + + + +VDM + G +
Sbjct: 330 AGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRV 389
Query: 219 VNARLV---FEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLN 263
A + E ++ W A++S ++G+ V E R+ N
Sbjct: 390 DEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSN 437
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 202/426 (47%), Gaps = 42/426 (9%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
+V N++I Y + D++SA VF+E + V+W+ ++ GF N + +DEA
Sbjct: 261 DVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHN-------QRYDEAL 313
Query: 65 HELKGVVTWTVMVDGYARKGEMEAAREVFELMP-------------ERNCFVWSSMVSGY 111
+V V VD + + + +P E N SS++ Y
Sbjct: 314 EMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAY 373
Query: 112 CKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVV 171
V +A T+ + + + +TMI+G G + A+ F MR P+ TV+
Sbjct: 374 TSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVI 430
Query: 172 SVLSACAQLGLLDAGKQIHHMIEHKRLTVNPF-VLSGLVDMYAKCGDLVNARLVFEGFTQ 230
S+L+AC+ L K H + + L +N V + +VD YAKCG + AR F+ T+
Sbjct: 431 SLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITE 490
Query: 231 RNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEV 290
+NI W +IS +AING + L F M+ P+A+T+L LSAC HGGL+ + L +
Sbjct: 491 KNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMI 550
Query: 291 ISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMP--MEPNETVLGAMLGACRTH 348
M + ++HY C+VD+L RAG + A +LIK +P ++ + GA+L CR
Sbjct: 551 FKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRN- 609
Query: 349 SDMKMAEQVIKLIGTNSITR--------ADSHNVLLSNIYAASEKWEKAEKMRGIMVDGE 400
+ KLI T+ + S +L S+ +AA + WE MR ++ + +
Sbjct: 610 -------RFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERK 662
Query: 401 SEKIAG 406
+AG
Sbjct: 663 VRVVAG 668
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 168/379 (44%), Gaps = 47/379 (12%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELK- 68
N+++ Y + D SA +F+EM + ++WS +I + ++ + +LF E HE K
Sbjct: 164 NSILCMYA-DSDSLSARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKT 222
Query: 69 --GVVTWTVMVDGYARKGEMEAAREVFELMPER-----NCFVWSSMVSGYCKKGSVAEAE 121
VT T ++ +++ R V R + FV +S++ Y K V A
Sbjct: 223 EPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAF 282
Query: 122 TIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLG 181
+F R++ WN+++AG+V N + AL+ F M E E DE TVVS+L C
Sbjct: 283 RVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFE 342
Query: 182 LLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMIS 241
K IH +I + N LS L+D Y C + +A V + T +++ + MIS
Sbjct: 343 QPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMIS 402
Query: 242 GFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSAC-----------AHGGLLSEALEV 290
G A G+ E + F M + P+AIT +++L+AC AHG + +L +
Sbjct: 403 GLAHAGRSDEAISIFCHMRD---TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAI 459
Query: 291 ------ISKMEAY----AIEMGIKHYGCMVD--------------LLGRAGRLKEAYDLI 326
S ++AY AIEM + + + + + G + +D +
Sbjct: 460 NDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEM 519
Query: 327 KRMPMEPNETVLGAMLGAC 345
K+ PN A L AC
Sbjct: 520 KQKGYTPNAVTYLAALSAC 538
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 8/202 (3%)
Query: 102 FVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAE 161
F +S+ Y K G + F + R WN ++ G + GF E L F ++R
Sbjct: 62 FQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVW 121
Query: 162 GFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA 221
GFEP+ T+V V+ AC L G++IH + V + ++ MYA D ++A
Sbjct: 122 GFEPNTSTLVLVIHACRSLWF--DGEKIHGYVIRSGFCGISSVQNSILCMYAD-SDSLSA 178
Query: 222 RLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRM-ENLNIRPDAITFLTVLSACAH 280
R +F+ ++R++ W+ +I + + + L+ F M PD +T +VL AC
Sbjct: 179 RKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT- 237
Query: 281 GGLLSEALEVISKMEAYAIEMG 302
+ E ++V + ++I G
Sbjct: 238 ---VMEDIDVGRSVHGFSIRRG 256
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 192/372 (51%), Gaps = 16/372 (4%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
E + T A+IS Y + G A FE +P K V ++ + G+ + GD A ++
Sbjct: 433 ESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKN 492
Query: 63 A--------PHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKK 114
+ G++ YAR + ++ + + C V ++++ + K
Sbjct: 493 MKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYG--QIIKHGFDSECHVAHALINMFTKC 550
Query: 115 GSVAEAETIFGRIPV-RSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSV 173
++A A +F + +S WN M+ GY+ +G E A+ F +M+ E F+P+ T V++
Sbjct: 551 DALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNI 610
Query: 174 LSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNI 233
+ A A+L L G +H + V + LVDMYAKCG + ++ F + + I
Sbjct: 611 VRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYI 670
Query: 234 CCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISK 293
WN M+S +A +G + F M+ ++PD+++FL+VLSAC H GL+ E + +
Sbjct: 671 VSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEE 730
Query: 294 M-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMK 352
M E + IE ++HY CMVDLLG+AG EA ++++RM ++ + V GA+L + R H ++
Sbjct: 731 MGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLW 790
Query: 353 MAE----QVIKL 360
++ Q++KL
Sbjct: 791 LSNAALCQLVKL 802
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 168/342 (49%), Gaps = 20/342 (5%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
E +V A++ Y + D+ SA VF++M K VTW+ M+ G A+NG ++ A LF
Sbjct: 132 ESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLF-- 189
Query: 63 APHELKGV------VTWTVMVDGYARKGEMEAAREVFELMPERN-CFVWSS-MVSGYCKK 114
H+++ V+ ++ ++ + + R + L+ ++ F +SS ++ YC
Sbjct: 190 --HDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMYCNC 247
Query: 115 GSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVL 174
+ AE++F + + W TM+A Y NGF E L+ F+ MR ++ S L
Sbjct: 248 ADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASAL 307
Query: 175 SACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNIC 234
A A +G L G IH + L + V + L+ MY+KCG+L A +F R++
Sbjct: 308 QAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVV 367
Query: 235 CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM 294
W+AMI+ + G+ E + F M ++I+P+A+T +VL CA G+ + L +
Sbjct: 368 SWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCA--GVAASRLG--KSI 423
Query: 295 EAYAIEMGIKH----YGCMVDLLGRAGRLKEAYDLIKRMPME 332
YAI+ I+ ++ + + GR A +R+P++
Sbjct: 424 HCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIK 465
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 166/378 (43%), Gaps = 45/378 (11%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKG 69
N +I+ Y + + ++F+ + V W+ MI G+ R G A F E KG
Sbjct: 37 NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEE-KG 95
Query: 70 V----VTWTVMVDGYARKGEMEAAREVFELMPE----RNCFVWSSMVSGYCKKGSVAEAE 121
+ ++T + A + + + +L+ E + ++ +++V YCK + A
Sbjct: 96 IDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSAR 155
Query: 122 TIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLG 181
+F ++ V+ + WNTM++G QNG AL F +MR+ + D ++ +++ A ++L
Sbjct: 156 QVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLE 215
Query: 182 LLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMIS 241
D + +H ++ K SGL+DMY C DL A VFE +++ W M++
Sbjct: 216 KSDVCRCLHGLVIKKGFIFA--FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMA 273
Query: 242 GFAINGKCREVLEFFGRMENLNIR----------------PDAITFLTVLSACAHGGLLS 285
+A NG EVLE F M N ++R D + + + GL+
Sbjct: 274 AYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIG 333
Query: 286 EALEVISKMEAYA----IEMG-----------IKHYGCMVDLLGRAGRLKEAYDLIK--- 327
+ S M Y+ +E+ + + M+ +AG+ EA L +
Sbjct: 334 DVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMM 393
Query: 328 RMPMEPNETVLGAMLGAC 345
R+ ++PN L ++L C
Sbjct: 394 RIHIKPNAVTLTSVLQGC 411
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 73/178 (41%), Gaps = 13/178 (7%)
Query: 221 ARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRM-ENLNIRPDAITFLTVLSACA 279
+R++F+ + WN+MI G+ G RE L FFG M E I PD +F L ACA
Sbjct: 52 SRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACA 111
Query: 280 HGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEP----NE 335
+ L + + +E + +V++ +A L A + +M ++ N
Sbjct: 112 GSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNT 171
Query: 336 TVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMR 393
V G C + + + L D +V L N+ A K EK++ R
Sbjct: 172 MVSGLAQNGCSSAA--------LLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCR 221
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/474 (27%), Positives = 211/474 (44%), Gaps = 81/474 (17%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMP----------------------------G 34
R++V+WN+MIS + +NG A +F+E+ G
Sbjct: 457 HRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFG 516
Query: 35 KTGVTWSQMIGGFARNGDTATARRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFE 94
K+ W Q +G T+ RL E E + + +W ++ G A G + F+
Sbjct: 517 KSVHCWLQKLGDL-----TSAFLRL--ETMSETRDLTSWNSVISGCASSGHHLESLRAFQ 569
Query: 95 LMP--------------------------ERNCF--------------VWSSMVSGYCKK 114
M + CF + +++++ Y +
Sbjct: 570 AMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRC 629
Query: 115 GSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVL 174
+ A +FG I +L WN +I+ QN G Q F ++ EP+E T V +L
Sbjct: 630 KDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK---LEPNEITFVGLL 686
Query: 175 SACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNIC 234
SA QLG G Q H + + NPFV + LVDMY+ CG L VF +I
Sbjct: 687 SASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSIS 746
Query: 235 CWNAMISGFAINGKCREVLEFFGRM-ENLNIRPDAITFLTVLSACAHGGLLSEALEVISK 293
WN++IS +G + +E F + N + P+ +F+++LSAC+H G + E L +
Sbjct: 747 AWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQ 806
Query: 294 M-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMK 352
M E + ++ +H +VD+LGRAG+L+EAY+ I + V GA+L AC H D K
Sbjct: 807 MEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTK 866
Query: 353 MAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
+ ++V +++ A S+ + L+N Y WE+A ++R ++ D +K+ G
Sbjct: 867 LGKEVAEVLFEMEPDNA-SYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPG 919
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 175/387 (45%), Gaps = 64/387 (16%)
Query: 2 PERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF- 60
PE +V N++IS Y + GD E+A VFEE+ + ++ + ++ GFA NG A +
Sbjct: 322 PEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILN 381
Query: 61 -----DEAPHELKGVVTWTVMVD--GYARKGEMEAAREVFELMPERNCFVWSSMVSGYCK 113
D+ ++ VV+ T + ++R+G V M R V +S++ Y K
Sbjct: 382 QMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGK 441
Query: 114 KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEF---TV 170
G +AE +F R L WN+MI+ + QNGF +A F+E+ +E + +F TV
Sbjct: 442 CGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSE-YSCSKFSLSTV 500
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ 230
+++L++C L GK +H ++ K GDL +A L E ++
Sbjct: 501 LAILTSCDSSDSLIFGKSVHCWLQ-------------------KLGDLTSAFLRLETMSE 541
Query: 231 -RNICCWNAMISGFAINGKCREVLEFFGRMENL-NIRPDAITFLTVLSA----------- 277
R++ WN++ISG A +G E L F M IR D IT L +SA
Sbjct: 542 TRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGR 601
Query: 278 CAHGGLLSEALEVISKMEAYAIEM---------GIKHYG-----------CMVDLLGRAG 317
C HG + E+ ++++ I M +K +G C++ L +
Sbjct: 602 CFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNK 661
Query: 318 RLKEAYDLIKRMPMEPNETVLGAMLGA 344
+E + L + + +EPNE +L A
Sbjct: 662 AGREVFQLFRNLKLEPNEITFVGLLSA 688
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 164/339 (48%), Gaps = 20/339 (5%)
Query: 4 RNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEA 63
+++ T + +++ Y R G++ S+S +F+E+ K + W+ MI +NG A LF E
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEM 179
Query: 64 PHE-------LKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGS 116
H+ + + +RK M + E + + +++++ Y K +
Sbjct: 180 IHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAI-ETGLVGDSSLCNALMNLYAKGEN 238
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
++ AE +F + R + WNT++ + NG ++LQ F+ M G E D T V+SA
Sbjct: 239 LSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISA 298
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSG--LVDMYAKCGDLVNARLVFEGFTQRNIC 234
C+ + L G+ +H ++ + V G ++ MY+KCGD A VFE R++
Sbjct: 299 CSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVI 358
Query: 235 CWNAMISGFAINGKCREVLEFFGRMENLN-IRPDAITFLTVLSAC-----AHGGLLSEAL 288
NA+++GFA NG E +M++++ I+PD T +++ S C + G
Sbjct: 359 SSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGY 418
Query: 289 EVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIK 327
V +M++ A+E+ ++D+ G+ G +A L K
Sbjct: 419 TVRMEMQSRALEV----INSVIDMYGKCGLTTQAELLFK 453
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 167/389 (42%), Gaps = 58/389 (14%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
M R + N++I Y + G A L+F+ + V+W+ MI F++NG T A+ LF
Sbjct: 424 MQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLF 483
Query: 61 DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEA 120
E E K + + + ++ V + +K + +
Sbjct: 484 KEVVSEYS------------CSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQK--LGDL 529
Query: 121 ETIFGRI----PVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEG-FEPDEFTVVSVLS 175
+ F R+ R L WN++I+G +G +L+AF+ M EG D T++ +S
Sbjct: 530 TSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTIS 589
Query: 176 ACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICC 235
A LGL+ G+ H + ++ + + L+ MY +C D+ +A VF + N+C
Sbjct: 590 ASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCS 649
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSAC-----------AHGGLL 284
WN +IS + N REV + F NL + P+ ITF+ +LSA AH L+
Sbjct: 650 WNCVISALSQNKAGREVFQLF---RNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLI 706
Query: 285 SEALEVISKMEAYAIEM--------------------GIKHYGCMVDLLGRAGRLKEAYD 324
+ + A ++M I + ++ G G ++A +
Sbjct: 707 RRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAME 766
Query: 325 LIKRMP----MEPNETVLGAMLGACRTHS 349
L K + MEPN++ ++L AC +HS
Sbjct: 767 LFKELSSNSEMEPNKSSFISLLSAC-SHS 794
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 131/281 (46%), Gaps = 12/281 (4%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE--APHEL 67
NA+++ Y + ++ SA VF M + V+W+ ++ NG + + F +
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQE 286
Query: 68 KGVVTWTVMVDGYARKGEMEAAREVFELM------PERNCFVWSSMVSGYCKKGSVAEAE 121
VT++ ++ + E+ + L+ PE + V +S++S Y K G AE
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAE 346
Query: 122 TIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRA-EGFEPDEFTVVSVLSACAQL 180
T+F + R + N ++ G+ NG E A +M++ + +PD TVVS+ S C L
Sbjct: 347 TVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDL 406
Query: 181 GLLDAGKQIHHMIEHKRLTVNPF-VLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAM 239
G+ +H + V++ ++DMY KCG A L+F+ T R++ WN+M
Sbjct: 407 SFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSM 466
Query: 240 ISGFAINGKCREVLEFFGRM--ENLNIRPDAITFLTVLSAC 278
IS F+ NG + F + E + T L +L++C
Sbjct: 467 ISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSC 507
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 106/243 (43%), Gaps = 23/243 (9%)
Query: 53 TATARRLFDEAPHELKGVVTWTVM-----VDGYARKGEMEAAREVFELMPERNCFVW--- 104
T LFDE P + + M + + + E E R V +CF
Sbjct: 65 TPIVHNLFDELPERENRTMESSFMFLRDVLRSFMMRTETETPRSV-------HCFALKCG 117
Query: 105 --------SSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFE 156
S +++ Y + G + + +F + + + +WN+MI QNG A+ F
Sbjct: 118 LLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFI 177
Query: 157 EMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCG 216
EM +G E D T++ SA + L L +H + L + + + L+++YAK
Sbjct: 178 EMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGE 237
Query: 217 DLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLS 276
+L +A VF R+I WN +++ NG R+ L++F M D +TF V+S
Sbjct: 238 NLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVIS 297
Query: 277 ACA 279
AC+
Sbjct: 298 ACS 300
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 208/408 (50%), Gaps = 26/408 (6%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGF--ARNGDTATA---- 56
E+ + NA ++ Y D +A VFE + K VTW+ MI + A+ G +A +
Sbjct: 320 EKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKR 379
Query: 57 RRLFDEAPHELKGVVTWTVMVDGYARKGEMEAARE-VFELMPERNCFVWSSMVSGYCKKG 115
+ P E T+ ++ +E + + + + ++++S Y K G
Sbjct: 380 MHIIGVKPDEF----TFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNG 435
Query: 116 SVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFE-----EMRAEGFEPDEFTV 170
+ +A+ +F R ++L WN +I+G+ NGF L+ F E+R PD +T+
Sbjct: 436 QIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVR---ILPDAYTL 492
Query: 171 VSVLSACAQLGLLDAGKQIH-HMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT 229
++LS C L G Q H +++ H + + + L++MY++CG + N+ VF +
Sbjct: 493 STLLSICVSTSSLMLGSQTHAYVLRHGQFK-ETLIGNALINMYSQCGTIQNSLEVFNQMS 551
Query: 230 QRNICCWNAMISGFAINGKCREVLEFFGRMENL-NIRPDAITFLTVLSACAHGGLLSEAL 288
++++ WN++IS ++ +G+ + + M++ + PDA TF VLSAC+H GL+ E L
Sbjct: 552 EKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGL 611
Query: 289 EVISKM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIK--RMPMEPNETVLGAMLGAC 345
E+ + M E + + + H+ C+VDLLGRAG L EA L+K + V A+ AC
Sbjct: 612 EIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSAC 671
Query: 346 RTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMR 393
H D+K+ + V KL+ + V LSNIYA + W++AE+ R
Sbjct: 672 AAHGDLKLGKMVAKLLMEKEKDDPSVY-VQLSNIYAGAGMWKEAEETR 718
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 163/345 (47%), Gaps = 39/345 (11%)
Query: 80 YARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRS-LEIWNTM 138
Y R G + + ++ F+ + E + + W++++S K G + A +F ++P R + IWN M
Sbjct: 102 YERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAM 161
Query: 139 IAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRL 198
I G ++G+ E +++ F EM G D+F ++LS C G LD GKQ+H ++
Sbjct: 162 ITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGF 220
Query: 199 TVNPFVLSGLVDMYAKCGDLVNARLVFE--GFTQRNICCWNAMISGFAINGKCREVLEFF 256
+ V++ L+ MY C +V+A LVFE R+ +N +I G A K E L F
Sbjct: 221 FIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA-GFKRDESLLVF 279
Query: 257 GRMENLNIRPDAITFLTVLS--ACAHGGLLSEALEVISKMEAYAI-------------EM 301
+M ++RP +TF++V+ +CA G L + + E Y + +
Sbjct: 280 RKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDF 339
Query: 302 GIKH-------------YGCMVDLLGRAGRLKEAYDLIKRMPM---EPNETVLGAMLGAC 345
G H + M+ +A K A + KRM + +P+E G++L
Sbjct: 340 GAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATS 399
Query: 346 RTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAE 390
++M + I G +S + + N L+S Y+ + + EKA+
Sbjct: 400 LDLDVLEMVQACIIKFGLSS--KIEISNALIS-AYSKNGQIEKAD 441
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 157/345 (45%), Gaps = 33/345 (9%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVT-WSQMIGGFARNGDTATARRL 59
+ E +V +W ++S + GD+E A VF++MP + V W+ MI G +G T+ L
Sbjct: 118 IDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVEL 177
Query: 60 FDE-----APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSG---- 110
F E H+ G T M D G ++ ++V L+ + F+ SS+V+
Sbjct: 178 FREMHKLGVRHDKFGFATILSMCD----YGSLDFGKQVHSLVIKAGFFIASSVVNALITM 233
Query: 111 YCKKGSVAEAETIF--GRIPVRSLEIWNTMIAGYVQNGFG-ERALQAFEEMRAEGFEPDE 167
Y V +A +F + VR +N +I G GF + +L F +M P +
Sbjct: 234 YFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA--GFKRDESLLVFRKMLEASLRPTD 291
Query: 168 FTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEG 227
T VSV+ +C+ + G Q+H + V + + MY+ D A VFE
Sbjct: 292 LTFVSVMGSCSCAAM---GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFES 348
Query: 228 FTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEA 287
++++ WN MIS + + + + RM + ++PD TF ++L+ S
Sbjct: 349 LEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLAT-------SLD 401
Query: 288 LEVISKMEAYAIEMG----IKHYGCMVDLLGRAGRLKEAYDLIKR 328
L+V+ ++A I+ G I+ ++ + G++++A L +R
Sbjct: 402 LDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFER 446
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 162/384 (42%), Gaps = 58/384 (15%)
Query: 10 NAMISGYMRNGDMESASLVFEE--MPGKTGVTWSQMI---GGFARNGDTATARRLFDEA- 63
NA+I+ Y + A LVFEE + + VT++ +I GF R+ R++ + +
Sbjct: 228 NALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRDESLLVFRKMLEASL 287
Query: 64 -PHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAET 122
P +L V +VM + + E+ V ++ ++ Y A
Sbjct: 288 RPTDLTFV---SVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHK 344
Query: 123 IFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGL 182
+F + + L WNTMI+ Y Q G+ A+ ++ M G +PDEFT S+L+ L +
Sbjct: 345 VFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDV 404
Query: 183 LDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISG 242
L+ + I L+ + + L+ Y+K G + A L+FE ++N+ WNA+ISG
Sbjct: 405 LE---MVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISG 461
Query: 243 FAINGKCREVLEFFGRM--ENLNIRPDAITFLTVLSACA-----------------HG-- 281
F NG E LE F + + I PDA T T+LS C HG
Sbjct: 462 FYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQF 521
Query: 282 ----------------GLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDL 325
G + +LEV ++M E + + ++ R G + A +
Sbjct: 522 KETLIGNALINMYSQCGTIQNSLEVFNQMS----EKDVVSWNSLISAYSRHGEGENAVNT 577
Query: 326 IKRMPME----PNETVLGAMLGAC 345
K M E P+ A+L AC
Sbjct: 578 YKTMQDEGKVIPDAATFSAVLSAC 601
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 33/181 (18%)
Query: 136 NTMIAGYVQNGFGERALQAFEEM-RAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIE 194
N + G ++G AL+ F ++ R PD+++V ++ L G Q+H
Sbjct: 25 NRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAI 84
Query: 195 HKRLTVNPFVLSGLVDMYAKCGDLVNARL------------------------------- 223
L + V + L+ +Y + G+L + +
Sbjct: 85 RSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFE 144
Query: 224 VFEGFTQR-NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGG 282
VF+ +R ++ WNAMI+G +G +E F M L +R D F T+LS C +G
Sbjct: 145 VFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGS 204
Query: 283 L 283
L
Sbjct: 205 L 205
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 181/378 (47%), Gaps = 36/378 (9%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
E +V NA+I Y + G++E + L F+ + K V W+ ++ G+A N D LF +
Sbjct: 348 ETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQ 406
Query: 63 A------PHE-----------------LKGVVT----------WTVMVDGYARKGEMEAA 89
P E L V+ + ++ YA+ M A
Sbjct: 407 MLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDA 466
Query: 90 REVFELMPERNCFVWSSMVSG-YCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFG 148
+ + V ++V+G Y ++G E+ + + WN IA ++ +
Sbjct: 467 LLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYH 526
Query: 149 ERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLT-VNPFVLSG 207
E ++ F+ M PD++T VS+LS C++L L G IH +I + + FV +
Sbjct: 527 EEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNV 586
Query: 208 LVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPD 267
L+DMY KCG + + VFE ++N+ W A+IS I+G +E LE F +L +PD
Sbjct: 587 LIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPD 646
Query: 268 AITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIK 327
++F+++L+AC HGG++ E + + KM+ Y +E + HY C VDLL R G LKEA LI+
Sbjct: 647 RVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIR 706
Query: 328 RMPMEPNETVLGAMLGAC 345
MP + V L C
Sbjct: 707 EMPFPADAPVWRTFLDGC 724
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 133/276 (48%), Gaps = 7/276 (2%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKG 69
++ Y R +E A VFE+MP K+ TW+ M+ G F E
Sbjct: 153 TCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGAS 212
Query: 70 VVTWTVM--VDGYARKGEMEAAREVFELMPER--NC--FVWSSMVSGYCKKGSVAEAETI 123
+ + + + G + +++ ++++ ++ +C V +S++S Y K G+ AE +
Sbjct: 213 LTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERM 272
Query: 124 FGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLL 183
F + WN +I ++ +AL+ F M GF P++ T VSVL + + LL
Sbjct: 273 FQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLL 332
Query: 184 DAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGF 243
G+QIH M+ + + L+D YAKCG+L ++RL F+ +NI CWNA++SG+
Sbjct: 333 SCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGY 392
Query: 244 AINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA 279
A N L F +M + RP TF T L +C
Sbjct: 393 A-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCC 427
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 152/332 (45%), Gaps = 12/332 (3%)
Query: 6 VVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPH 65
V N +IS Y + G++ A VF++MP + V+++ +I G+++ GD A +F E +
Sbjct: 49 VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY 108
Query: 66 ELKGVVTWTVMVDGYARKGEME--AAREVFELMPER-----NCFVWSSMVSGYCKKGSVA 118
G + V G ++ A ++ L + + FV + ++ Y + +
Sbjct: 109 --FGYLPNQSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLE 166
Query: 119 EAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACA 178
AE +F +P +SLE WN M++ GF + + F E+ G E + + VL +
Sbjct: 167 MAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVS 226
Query: 179 QLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNA 238
+ LD KQ+H K L V++ L+ Y KCG+ A +F+ +I WNA
Sbjct: 227 CVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNA 286
Query: 239 MISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYA 298
+I A + + L+ F M P+ T+++VL + LLS ++ +
Sbjct: 287 IICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNG 346
Query: 299 IEMGIKHYGCMVDLLGRAGRLKEA---YDLIK 327
E GI ++D + G L+++ +D I+
Sbjct: 347 CETGIVLGNALIDFYAKCGNLEDSRLCFDYIR 378
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 34/210 (16%)
Query: 67 LKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGR 126
L+ V ++ Y + GE+ A +VF+ MPERN +++++ GY K G V
Sbjct: 46 LQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDV--------- 96
Query: 127 IPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAG 186
++A F EMR G+ P++ TV +LS CA L + AG
Sbjct: 97 ----------------------DKAWGVFSEMRYFGYLPNQSTVSGLLS-CASLD-VRAG 132
Query: 187 KQIHHM-IEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAI 245
Q+H + +++ + FV + L+ +Y + L A VFE +++ WN M+S
Sbjct: 133 TQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGH 192
Query: 246 NGKCREVLEFFGRMENLNIRPDAITFLTVL 275
G +E + FF + + +FL VL
Sbjct: 193 RGFLKECMFFFRELVRMGASLTESSFLGVL 222
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 178 bits (451), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 170/309 (55%), Gaps = 11/309 (3%)
Query: 91 EVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGER 150
+VF+L E + FV +S+++ Y + G + + +F ++ ++ W++M++ G
Sbjct: 157 QVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSE 216
Query: 151 ALQAFEEMRAE-GFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLV 209
L F M +E + +E +VS L ACA G L+ G IH + +N V + LV
Sbjct: 217 CLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLV 276
Query: 210 DMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAI 269
DMY KCG L A +F+ +RN ++AMISG A++G+ L F +M + PD +
Sbjct: 277 DMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHV 336
Query: 270 TFLTVLSACAHGGLLSEALEVISKM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKR 328
+++VL+AC+H GL+ E V ++M + +E +HYGC+VDLLGRAG L+EA + I+
Sbjct: 337 VYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQS 396
Query: 329 MPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHN----VLLSNIYAASE 384
+P+E N+ + L CR ++++ + I + + SHN +L+SN+Y+ +
Sbjct: 397 IPIEKNDVIWRTFLSQCRVRQNIELGQ-----IAAQELLKLSSHNPGDYLLISNLYSQGQ 451
Query: 385 KWEKAEKMR 393
W+ + R
Sbjct: 452 MWDDVARTR 460
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 6/251 (2%)
Query: 114 KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSV 173
+ S+ A +IF I +NTMI GYV E AL + EM G EPD FT +
Sbjct: 79 ENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCL 138
Query: 174 LSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNI 233
L AC +L + GKQIH + L + FV + L++MY +CG++ + VFE +
Sbjct: 139 LKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTA 198
Query: 234 CCWNAMISGFAINGKCREVLEFF-GRMENLNIRPDAITFLTVLSACAHGGLLSEALEVIS 292
W++M+S A G E L F G N++ + ++ L ACA+ G L+ + +
Sbjct: 199 ASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHG 258
Query: 293 KMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTH---- 348
+ E+ I +VD+ + G L +A + ++M N T AM+ H
Sbjct: 259 FLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTY-SAMISGLALHGEGE 317
Query: 349 SDMKMAEQVIK 359
S ++M ++IK
Sbjct: 318 SALRMFSKMIK 328
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 117/248 (47%), Gaps = 9/248 (3%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
E +V N++I+ Y R G+ME +S VFE++ KT +WS M+ A G + LF
Sbjct: 164 EADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRG 223
Query: 63 APHELKGVVTWTVMVDGY---ARKGEMEAAREVFELM----PERNCFVWSSMVSGYCKKG 115
E + MV A G + + + E N V +S+V Y K G
Sbjct: 224 MCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCG 283
Query: 116 SVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLS 175
+ +A IF ++ R+ ++ MI+G +G GE AL+ F +M EG EPD VSVL+
Sbjct: 284 CLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLN 343
Query: 176 ACAQLGLLDAGKQIH-HMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF-TQRNI 233
AC+ GL+ G+++ M++ ++ LVD+ + G L A + ++N
Sbjct: 344 ACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKND 403
Query: 234 CCWNAMIS 241
W +S
Sbjct: 404 VIWRTFLS 411
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 178 bits (451), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 121/416 (29%), Positives = 206/416 (49%), Gaps = 17/416 (4%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
+ N+ N +I Y + F M K ++W+ +I G+A+N A LF +
Sbjct: 418 DSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRD 477
Query: 63 APH---ELKGVVTWTVMVDGYARKGEMEAAREVFELMPER---NCFVWSSMVSGYCKKGS 116
E+ ++ +++ K M +E+ + + + + + +V Y K +
Sbjct: 478 VAKKRMEIDEMILGSILRASSVLKS-MLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRN 536
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+ A +F I + + W +MI+ NG A++ F M G D ++ +LSA
Sbjct: 537 MGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSA 596
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
A L L+ G++IH + K + + +VDMYA CGDL +A+ VF+ ++ + +
Sbjct: 597 AASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQY 656
Query: 237 NAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKME- 295
+MI+ + ++G + +E F +M + N+ PD I+FL +L AC+H GLL E + ME
Sbjct: 657 TSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEH 716
Query: 296 AYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAE 355
Y +E +HY C+VD+LGRA + EA++ +K M EP V A+L ACR+HS+ ++ E
Sbjct: 717 EYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGE 776
Query: 356 QVIKLIGTNSITRADSHN----VLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
I + + N VL+SN++A +W EK+R M EK GC
Sbjct: 777 -----IAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGC 827
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 147/295 (49%), Gaps = 12/295 (4%)
Query: 16 YMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHE--LKGVVTW 73
Y + G ++ A VF+EMP +T W+ MIG + NG+ A+A L+ E G+ ++
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSF 185
Query: 74 TVMVDGYARKGEMEAAREVFELMPE----RNCFVWSSMVSGYCKKGSVAEAETIFGRIPV 129
++ A+ ++ + E+ L+ + F+ +++VS Y K ++ A +F
Sbjct: 186 PALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE 245
Query: 130 R-SLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQ 188
+ +WN++++ Y +G L+ F EM G P+ +T+VS L+AC GK+
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKE 305
Query: 189 IH-HMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAING 247
IH +++ + +V + L+ MY +CG + A + ++ WN++I G+ N
Sbjct: 306 IHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNL 365
Query: 248 KCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMG 302
+E LEFF M + D ++ ++++A G LS L + ++ AY I+ G
Sbjct: 366 MYKEALEFFSDMIAAGHKSDEVSMTSIIAA---SGRLSNLLAGM-ELHAYVIKHG 416
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 129/245 (52%), Gaps = 11/245 (4%)
Query: 92 VFELMPERNC-FVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGER 150
+F+ P F+ +V Y K GS+ +AE +F +P R+ WNTMI YV NG
Sbjct: 106 IFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPAS 165
Query: 151 ALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVD 210
AL + MR EG + ++L ACA+L + +G ++H ++ F+++ LV
Sbjct: 166 ALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVS 225
Query: 211 MYAKCGDLVNARLVFEGFTQR-NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAI 269
MYAK DL AR +F+GF ++ + WN+++S ++ +GK E LE F M P++
Sbjct: 226 MYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSY 285
Query: 270 TFLTVLSAC---AHGGLLSEALEVISKMEAYAIEMGIKHYGC--MVDLLGRAGRLKEAYD 324
T ++ L+AC ++ L E + K ++ E+ Y C ++ + R G++ +A
Sbjct: 286 TIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL----YVCNALIAMYTRCGKMPQAER 341
Query: 325 LIKRM 329
++++M
Sbjct: 342 ILRQM 346
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 135/277 (48%), Gaps = 10/277 (3%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGK-TGVTWSQMIGGFARNGDTATARRLFDE------ 62
NA++S Y +N D+ +A +F+ K V W+ ++ ++ +G + LF E
Sbjct: 221 NALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGP 280
Query: 63 APHELKGVVTWTVMVDG--YARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEA 120
AP+ +V+ DG YA+ G+ A + +V +++++ Y + G + +A
Sbjct: 281 APNSYT-IVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQA 339
Query: 121 ETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQL 180
E I ++ + WN++I GYVQN + AL+ F +M A G + DE ++ S+++A +L
Sbjct: 340 ERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRL 399
Query: 181 GLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMI 240
L AG ++H + N V + L+DMY+KC F +++ W +I
Sbjct: 400 SNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVI 459
Query: 241 SGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSA 277
+G+A N E LE F + + D + ++L A
Sbjct: 460 AGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA 496
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 201/417 (48%), Gaps = 21/417 (5%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
N +++ Y++ G + A VF++M K V + ++ G+ + G A +LF +
Sbjct: 218 NTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLV 277
Query: 65 HELKGV----VTWTVMVDGYARKGEMEAAREVF----ELMPERNCFVWSSMVSGYCKKGS 116
E GV ++V++ A E+ +++ +L E V + +V Y K S
Sbjct: 278 TE--GVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSS 335
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEP-DEFTVVSVLS 175
A F I + W+ +I+GY Q E A++ F+ +R++ + FT S+
Sbjct: 336 FESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQ 395
Query: 176 ACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICC 235
AC+ L + G Q+H + L + + S L+ MY+KCG L +A VFE +I
Sbjct: 396 ACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVA 455
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM- 294
W A ISG A G E L F +M + ++P+++TF+ VL+AC+H GL+ + + M
Sbjct: 456 WTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTML 515
Query: 295 EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMA 354
Y + I HY CM+D+ R+G L EA +K MP EP+ L C TH ++++
Sbjct: 516 RKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELG 575
Query: 355 EQVIKLIGTNSITRADSHN----VLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
E I + + D + VL N+Y + KWE+A +M +M + +K C
Sbjct: 576 E-----IAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSC 627
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 151/344 (43%), Gaps = 22/344 (6%)
Query: 53 TATARRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER------------- 99
+ + R +EA L+ + V V Y+ + EA RE+ L R
Sbjct: 57 SLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENP 116
Query: 100 NCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMR 159
+ + + ++ YC+ S+ +A+ +F + + TMI+ Y + G ++A+ F M
Sbjct: 117 SVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGML 176
Query: 160 AEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLV 219
A G +P ++L + LD G+QIH + L N + +G+V+MY KCG LV
Sbjct: 177 ASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLV 236
Query: 220 NARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA 279
A+ VF+ + ++ G+ G+ R+ L+ F + + D+ F VL ACA
Sbjct: 237 GAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACA 296
Query: 280 HGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLG 339
L+ ++ + + +E + +VD + + A + + EPN+
Sbjct: 297 SLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEI-REPNDVSWS 355
Query: 340 AML-GACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAA 382
A++ G C+ M E+ +K + R+ + ++L S Y +
Sbjct: 356 AIISGYCQ----MSQFEEAVKTFKS---LRSKNASILNSFTYTS 392
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 123/283 (43%), Gaps = 40/283 (14%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
E V ++ Y++ ESA F+E+ V+WS +I G+ + A + F
Sbjct: 317 ESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKS 376
Query: 63 APHELKGVV---TWTVMVDGYARKGEMEAAREVFELMPERNC----FVWSSMVSGYCKKG 115
+ ++ T+T + + + +V +R+ + S++++ Y K G
Sbjct: 377 LRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCG 436
Query: 116 SVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLS 175
+ +A +F + + W I+G+ G AL+ FE+M + G +P+ T ++VL+
Sbjct: 437 CLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLT 496
Query: 176 ACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICC 235
AC+ GL++ GK H ++ + + ++ +D Y
Sbjct: 497 ACSHAGLVEQGK---HCLD---TMLRKYNVAPTIDHY----------------------- 527
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSAC 278
+ MI +A +G E L+F M+N+ PDA+++ LS C
Sbjct: 528 -DCMIDIYARSGLLDEALKF---MKNMPFEPDAMSWKCFLSGC 566
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 175/333 (52%), Gaps = 7/333 (2%)
Query: 80 YARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMI 139
Y G ++ A+++F +P+R+ W+S+++G + G V A +F +P +++ WN MI
Sbjct: 163 YTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMI 222
Query: 140 AGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLT 199
+ Y+ ++ F EM GF+ +E T+V +L+AC + L G+ +H + L
Sbjct: 223 SAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLN 282
Query: 200 VNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRM 259
+ + + L+DMY KC ++ AR +F+ + RN WN MI ++G+ LE F M
Sbjct: 283 SSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAM 342
Query: 260 ENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYAIEMGIKHYGCMVDLLGRAGR 318
N +RPD +TF+ VL CA GL+S+ S M + + I+ H CM +L AG
Sbjct: 343 INGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGF 402
Query: 319 LKEAYDLIKRMPME---PNETVLGAMLGACRTHSDMKMAEQVIK-LIGTNSITRADSHNV 374
+EA + +K +P E P T +L + R + + E + K LI T+ + H
Sbjct: 403 PEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYH-- 460
Query: 375 LLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
LL NIY+ + +WE ++R ++ + + +I GC
Sbjct: 461 LLMNIYSVTGRWEDVNRVREMVKERKIGRIPGC 493
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 6/199 (3%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
+P+R++V+WN++I+G +RNGD+ +A +F+EMP K ++W+ MI + + + LF
Sbjct: 179 IPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLF 238
Query: 61 DEAPHE-LKGV-VTWTVMVDGYARKGEMEAAREV----FELMPERNCFVWSSMVSGYCKK 114
E +G T ++++ R ++ R V + + ++++ Y K
Sbjct: 239 REMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKC 298
Query: 115 GSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVL 174
V A IF + +R+ WN MI + +G E L+ FE M PDE T V VL
Sbjct: 299 KEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVL 358
Query: 175 SACAQLGLLDAGKQIHHMI 193
CA+ GL+ G+ + ++
Sbjct: 359 CGCARAGLVSQGQSYYSLM 377
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Query: 136 NTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIH-HMIE 194
N + Y+ + ++AL + ++ GF PD +T VS++S + +D+GK H I+
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 195 HKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLE 254
H V P V + L+ MY CG L A+ +F +R+I WN++I+G NG +
Sbjct: 147 HGCDQVLP-VQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHK 205
Query: 255 FFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLG 314
F M + NI I++ ++SA ++ + +M + +++ G
Sbjct: 206 LFDEMPDKNI----ISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACG 261
Query: 315 RAGRLKE 321
R+ RLKE
Sbjct: 262 RSARLKE 268
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 204/407 (50%), Gaps = 17/407 (4%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
M ++ VT+ MI+ YM G ++SA +F + K +T++ ++ GF RNG A +LF
Sbjct: 346 MMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLF 405
Query: 61 DEAPHELKGV----VTWTVMVDGYARKGEMEAAREV----FELMPERNCFVWSSMVSGYC 112
+ +GV + T VD E + + ++ + N + ++++
Sbjct: 406 TDMLQ--RGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCT 463
Query: 113 KKGSVAEAETIFGRIP--VRSLEIWNTMIAGYVQNGFGERALQAFEEMRAE-GFEPDEFT 169
+ +A+AE +F + P + S + ++I GY +NG ++A+ F E DE +
Sbjct: 464 RCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVS 523
Query: 170 VVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT 229
+ +L+ C LG + G QIH + + + L+ MYAKC D +A +F
Sbjct: 524 LTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMR 583
Query: 230 QRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAH--GGLLSEA 287
+ ++ WN++IS + + E L + RM I+PD IT V+SA + LS
Sbjct: 584 EHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSC 643
Query: 288 LEVISKMEA-YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACR 346
++ M+ Y IE +HY V +LG G L+EA D I MP++P +VL A+L +CR
Sbjct: 644 RDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCR 703
Query: 347 THSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMR 393
HS+ +A++V KLI + S +L SNIY+AS W ++E +R
Sbjct: 704 IHSNTSVAKRVAKLILSTK-PETPSEYILKSNIYSASGFWHRSEMIR 749
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 162/370 (43%), Gaps = 57/370 (15%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE------- 62
NA+IS Y++ G A LVF + T V+++ +I GF+R A ++F
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 63 APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPE----RNCFVWSSMVSGYCKK--GS 116
P+E V T V R ++ L+ + + FV +S++S Y K S
Sbjct: 178 QPNEYTFVAILTACV----RVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSS 233
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEM-RAEGFEPDEFTVVSVLS 175
+ +F IP R + WNT+++ V+ G +A F EM R EGF D FT+ ++LS
Sbjct: 234 CDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLS 293
Query: 176 ACAQLGLLDAGKQIH----HMIEHKRLTVN---------------------------PFV 204
+C +L G+++H + + L+VN
Sbjct: 294 SCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVT 353
Query: 205 LSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNI 264
+ ++ Y G + +A +F T++N +NA+++GF NG + L+ F M +
Sbjct: 354 FTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGV 413
Query: 265 RPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGC----MVDLLGRAGRLK 320
+ + + AC GL+SE +V ++ + I+ G C ++D+ R R+
Sbjct: 414 ELTDFSLTSAVDAC---GLVSEK-KVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMA 469
Query: 321 EAYDLIKRMP 330
+A ++ + P
Sbjct: 470 DAEEMFDQWP 479
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 143/312 (45%), Gaps = 14/312 (4%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMP-----GKTGVTWSQMIGGFARNGDTAT 55
+P+R+V +WN ++S ++ G A +F EM G T S ++ +
Sbjct: 244 IPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLR 303
Query: 56 ARRLFDEAPH--ELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCK 113
R L A ++ + ++ Y++ +M+ ++E+M ++ ++ M++ Y
Sbjct: 304 GRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMS 363
Query: 114 KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSV 173
G V A IF + ++ +N ++AG+ +NG G +AL+ F +M G E +F++ S
Sbjct: 364 FGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSA 423
Query: 174 LSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQR-- 231
+ AC + +QIH NP + + L+DM +C + +A +F+ +
Sbjct: 424 VDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLD 483
Query: 232 NICCWNAMISGFAINGKCREVLEFFGR-MENLNIRPDAITFLTVLSACAHGGLLSEALEV 290
+ ++I G+A NG + + F R + + D ++ +L+ C G E+
Sbjct: 484 SSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGF----REM 539
Query: 291 ISKMEAYAIEMG 302
++ YA++ G
Sbjct: 540 GYQIHCYALKAG 551
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 118/247 (47%), Gaps = 28/247 (11%)
Query: 76 MVDGY-------ARKGEMEAAREV---FELMPERNCFVWSSMVSGYCKKGSVAEAETIFG 125
++DG+ A+ ++E + V F + E + ++++S Y K G EA +F
Sbjct: 79 VIDGFFYLLRLSAQYHDVEVTKAVHASFLKLREEKTRLGNALISTYLKLGFPREAILVFV 138
Query: 126 RIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGF-EPDEFTVVSVLSACAQLGLLD 184
+ ++ + +I+G+ + AL+ F MR G +P+E+T V++L+AC ++
Sbjct: 139 SLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFS 198
Query: 185 AGKQIHHMIEHKRLTVNPFVLSGLVDMYAK-----CGDLVNARLVFEGFTQRNICCWNAM 239
G QIH +I + FV + L+ +Y K C D++ +F+ QR++ WN +
Sbjct: 199 LGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLK---LFDEIPQRDVASWNTV 255
Query: 240 ISGFAINGKCREVLEFF---GRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA 296
+S GK + + F R+E + D+ T T+LS+C +L E +
Sbjct: 256 VSSLVKEGKSHKAFDLFYEMNRVEGFGV--DSFTLSTLLSSCTDSSVLLRGRE----LHG 309
Query: 297 YAIEMGI 303
AI +G+
Sbjct: 310 RAIRIGL 316
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 210/411 (51%), Gaps = 18/411 (4%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
N++ +A++S Y R G ME A L F+ M + V+W+ MI G+ N T+ LF
Sbjct: 147 NLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLML 206
Query: 65 HELK--GVVTWTVMVDGYARKGEMEAAREVFELMPE----RNCFVWSSMVSGYCKKGSVA 118
E K T+ ++ +E E+ L + R+ + S+V+ Y K GS+A
Sbjct: 207 TEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLA 266
Query: 119 EAETIFGRIPVRSLEIWNTMIAGYVQ-NGFGERALQAFEEMRAEGFEPDEFTVVSVLSAC 177
A + R L +I G+ Q N A F++M + DE V S+L C
Sbjct: 267 NAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKIC 326
Query: 178 AQLGLLDAGKQIH-HMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
+ + G+QIH ++ ++ + + + L+DMYAK G++ +A L FE ++++ W
Sbjct: 327 TTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSW 386
Query: 237 NAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-E 295
++I+G+ +G + ++ + RME+ I+P+ +TFL++LSAC+H G ++ M
Sbjct: 387 TSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMIN 446
Query: 296 AYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMP--MEPNETVLGAMLGACRTHSDMKM 353
+ IE +H C++D+L R+G L+EAY LI+ + + + GA L ACR H ++
Sbjct: 447 KHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNV-- 504
Query: 354 AEQVIKLIGTNSIT---RADSHNVLLSNIYAASEKWEKAEKMRGIMVDGES 401
Q+ K+ T ++ R + + L+++YAA+ W+ A R +M + S
Sbjct: 505 --QLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGS 553
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 156/345 (45%), Gaps = 50/345 (14%)
Query: 107 MVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
++ Y K+G V A +F RI R + W MI+ + + G+ AL F+EM E + +
Sbjct: 53 LIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKAN 112
Query: 167 EFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFE 226
+FT SVL +C LG L G QIH +E N V S L+ +YA+CG + ARL F+
Sbjct: 113 QFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFD 172
Query: 227 GFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSE 286
+R++ WNAMI G+ N F M +PD TF ++L A ++ +
Sbjct: 173 SMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA----SIVVK 228
Query: 287 ALEVISKMEAYAIEMGIKHYGCMV--------------------------DLLGRAGRL- 319
LE++S++ AI++G ++ DLL +
Sbjct: 229 CLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALIT 288
Query: 320 ---------KEAYDLIK---RMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSIT 367
+A+D+ K RM + +E V+ +ML C T + + + Q+ +S
Sbjct: 289 GFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQI 348
Query: 368 RADSH--NVLLSNIYAASEKWEKA----EKMRGIMVDGESEKIAG 406
R D N L+ ++YA S + E A E+M+ V + IAG
Sbjct: 349 RFDVALGNSLI-DMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAG 392
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 168/383 (43%), Gaps = 42/383 (10%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
N+ + +I Y++ GD++ A +F+ + + V+W+ MI F+R G A LF E
Sbjct: 46 NLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMH 105
Query: 65 HE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPERNC----FVWSSMVSGYCKKGSVA 118
E T+ ++ G ++ ++ + + NC V S+++S Y + G +
Sbjct: 106 REDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKME 165
Query: 119 EAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACA 178
EA F + R L WN MI GY N + + F+ M EG +PD FT S+L A
Sbjct: 166 EARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASI 225
Query: 179 QLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNA 238
+ L+ ++H + + ++ LV+ Y KCG L NA + EG +R++ A
Sbjct: 226 VVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTA 285
Query: 239 MISGFAINGKC-REVLEFFGRMENLNIRPDAITFLTVLSACA-----------HGGLLSE 286
+I+GF+ C + + F M + + D + ++L C HG L
Sbjct: 286 LITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKS 345
Query: 287 A---LEVI---SKMEAYA---------------IEMGIKHYGCMVDLLGRAGRLKEAYDL 325
+ +V S ++ YA E ++ + ++ GR G ++A DL
Sbjct: 346 SQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDL 405
Query: 326 IKRMPME---PNETVLGAMLGAC 345
RM E PN+ ++L AC
Sbjct: 406 YNRMEHERIKPNDVTFLSLLSAC 428
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 210/477 (44%), Gaps = 85/477 (17%)
Query: 1 MPERNVVTWNAMISGYMRNG-DMES-------------------ASLVFEEMPGKTGVTW 40
MPERNVV+W AM+ GY +G D E A++VF+ +
Sbjct: 95 MPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEE 154
Query: 41 SQMIGG-----------FARN---------GDTATARRLFDEAPHELKGVVTWTVMVDGY 80
+ G F RN A R+ D+ P+ + ++ + GY
Sbjct: 155 GKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPY--CDLSVFSSALSGY 212
Query: 81 ARKGEMEAAREVFELMPERNCFVWS----------------------------------- 105
G + +V + FVW+
Sbjct: 213 LECGAFKEGLDVLRKTANED-FVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAE 271
Query: 106 -----SMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRA 160
++++ Y K G V A+ +F +++ + T++ Y Q+ E AL F +M
Sbjct: 272 VEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDT 331
Query: 161 EGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVN 220
+ P+E+T +L++ A+L LL G +H ++ + V + LV+MYAK G + +
Sbjct: 332 KEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIED 391
Query: 221 ARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAH 280
AR F G T R+I WN MISG + +G RE LE F RM P+ ITF+ VL AC+H
Sbjct: 392 ARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSH 451
Query: 281 GGLLSEALEVISK-MEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLG 339
G + + L ++ M+ + ++ I+HY C+V LL +AG K+A D ++ P+E +
Sbjct: 452 IGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWR 511
Query: 340 AMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIM 396
+L AC + ++ ++V + VLLSNI+A S +WE K+R +M
Sbjct: 512 TLLNACYVRRNYRLGKKVAEY-AIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLM 567
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 151/356 (42%), Gaps = 28/356 (7%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF-------DE 62
N++I+ Y++ + A +F+ MP + V+W M+ G+ +G +LF +
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES 132
Query: 63 APHELKGVVTWTVMVDGYARKGEMEAAREV------FELMPERNCFVWSSMVSGYCKKGS 116
P+E TV+ + G +E ++ + L+ FV +++V Y
Sbjct: 133 RPNEFVA----TVVFKSCSNSGRIEEGKQFHGCFLKYGLISHE--FVRNTLVYMYSLCSG 186
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
EA + +P L ++++ ++GY++ G + L + E F + T +S L
Sbjct: 187 NGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRL 246
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
+ L L+ Q+H + L++MY KCG ++ A+ VF+ +NI
Sbjct: 247 FSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLN 306
Query: 237 NAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA 296
++ + + E L F +M+ + P+ TF +L++ A LL + +
Sbjct: 307 TTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQG----DLLHG 362
Query: 297 YAIEMGIKHY----GCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTH 348
++ G +++ +V++ ++G +++A M + M+ C H
Sbjct: 363 LVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHH 417
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 173 VLSACAQLGLLDAGKQIH-HMI--EHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT 229
+L CA L G+ IH H+I + + ++ L+++Y KC + V AR +F+
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 230 QRNICCWNAMISGFAINGKCREVLEFFGRM-ENLNIRPDAITFLTVLSACAHGGLLSE 286
+RN+ W AM+ G+ +G EVL+ F M + RP+ V +C++ G + E
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEE 154
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 196/408 (48%), Gaps = 15/408 (3%)
Query: 10 NAMISGYMRNGDME-SASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE-APHEL 67
NA++ YM+ E AS VF M V+W+ +I G +G L E E+
Sbjct: 364 NALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREV 423
Query: 68 K-GVVTWTVMVDGYARKGEMEAAREVFELMPERNC----FVWSSMVSGYCKKGSVAEAET 122
+ VVT + ++ ++ + E+ + R+ V +S+V Y V A
Sbjct: 424 EPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWN 483
Query: 123 IFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGL 182
+ + R + +++ + + G E AL M +G D+ ++ +SA A LG
Sbjct: 484 VIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGA 543
Query: 183 LDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISG 242
L+ GK +H + VL+ LVDMY+KCG L +A+ VFE ++ WN ++SG
Sbjct: 544 LETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSG 603
Query: 243 FAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEA-YAIEM 301
A NG L F M PD++TFL +LSAC++G L LE M+ Y IE
Sbjct: 604 LASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEP 663
Query: 302 GIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLI 361
++HY +V +LGRAGRL+EA +++ M ++PN + +L ACR ++ + E +
Sbjct: 664 QVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGED----M 719
Query: 362 GTNSITRADSHN---VLLSNIYAASEKWEKAEKMRGIMVDGESEKIAG 406
+ A S +LL+++Y S K E A+K R +M + K G
Sbjct: 720 ANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLG 767
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 192/431 (44%), Gaps = 52/431 (12%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEA- 63
N+ N ++S Y++ + +A +F+EM +T W+ MI F ++ + A+A LF+E
Sbjct: 57 NLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMM 116
Query: 64 -----PHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGS 116
P+E VV + + G + + V + E N V SS+ Y K G
Sbjct: 117 ASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGS--VIKTGFEGNSVVGSSLSDLYSKCGQ 174
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
EA +F + W MI+ V ALQ + EM G P+EFT V +L A
Sbjct: 175 FKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGA 234
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
+ LG L+ GK IH I + + +N + + LVD Y++ + +A V ++++ W
Sbjct: 235 SSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLW 293
Query: 237 NAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA-----------HGGLLS 285
+++SGF N + +E + F M +L ++P+ T+ +LS C+ H +
Sbjct: 294 TSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIK 353
Query: 286 EALEVISKMEAYAIEMGIK----------HYGCMVD---------LLGRA--GRLKEAYD 324
E + + ++M +K +G MV +LG G +++ +
Sbjct: 354 VGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFG 413
Query: 325 LIKRM---PMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVL---LSN 378
L+ M +EPN L +L AC S ++ +V+++ D V+ L +
Sbjct: 414 LLMEMVKREVEPNVVTLSGVLRAC---SKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVD 470
Query: 379 IYAASEKWEKA 389
YA+S K + A
Sbjct: 471 AYASSRKVDYA 481
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 151/345 (43%), Gaps = 16/345 (4%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE 62
E N V +++ Y + G + A +F + ++W+ MI A + + E
Sbjct: 156 EGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSE 215
Query: 63 ------APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYC 112
P+E T+ ++ + G +E + + + R N + +S+V Y
Sbjct: 216 MVKAGVPPNEF----TFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYS 270
Query: 113 KKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVS 172
+ + +A + + + +W ++++G+V+N + A+ F EMR+ G +P+ FT +
Sbjct: 271 QFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSA 330
Query: 173 VLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKC-GDLVNARLVFEGFTQR 231
+LS C+ + LD GKQIH + V + LVDMY KC V A VF
Sbjct: 331 ILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSP 390
Query: 232 NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVI 291
N+ W +I G +G ++ M + P+ +T VL AC+ + LE+
Sbjct: 391 NVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIH 450
Query: 292 SKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNET 336
+ + ++ + +VD + ++ A+++I+ M N T
Sbjct: 451 AYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNIT 495
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%)
Query: 186 GKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAI 245
G IH + L N + + L+ +Y K + NAR +F+ + R + W MIS F
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 246 NGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKH 305
+ + L F M P+ TF +V+ +CA +S V + E
Sbjct: 102 SQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVV 161
Query: 306 YGCMVDLLGRAGRLKEAYDLIKRM 329
+ DL + G+ KEA +L +
Sbjct: 162 GSSLSDLYSKCGQFKEACELFSSL 185
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 203/400 (50%), Gaps = 50/400 (12%)
Query: 9 WNAMISGYMRNGDMESASLVFEEMPGKTGV-----TWSQMIGGFARNGDTATARRLFDEA 63
WN++ISGY G E A ++ +M + GV T+ +++ G + +
Sbjct: 163 WNSLISGYAELGQYEDAMALYFQM-AEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDL 221
Query: 64 PHELKG--VVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAE 121
E G V +V YA+ G++ AR VF+++P ++ W+SM++GY G + EA
Sbjct: 222 VKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEA- 280
Query: 122 TIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLG 181
L+I+ M VQN G EPD+ + SVL A++
Sbjct: 281 ----------LDIFRLM----VQN----------------GIEPDKVAISSVL---ARVL 307
Query: 182 LLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMIS 241
G+Q+H + + + V + L+ +Y+K G L A +F+ +R+ WNA+IS
Sbjct: 308 SFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIIS 367
Query: 242 GFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYAIE 300
+ N L++F +M N +PD ITF++VLS CA+ G++ + + S M + Y I+
Sbjct: 368 AHSKNSNG---LKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGID 424
Query: 301 MGIKHYGCMVDLLGRAGRLKEAYDLI-KRMPMEPNETVLGAMLGACRTHSDMKMAEQVIK 359
++HY CMV+L GRAG ++EAY +I + M +E TV GA+L AC H + + E +
Sbjct: 425 PKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQ 484
Query: 360 LIGTNSITRADSHNV-LLSNIYAASEKWEKAEKMRGIMVD 398
+ + + HN LL IY+ +++ E E++R +MVD
Sbjct: 485 RLF--ELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVD 522
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 100/191 (52%), Gaps = 6/191 (3%)
Query: 92 VFELMP----ERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVR--SLEIWNTMIAGYVQN 145
V L+P N + S +V Y G A +F R+ R S WN++I+GY +
Sbjct: 114 VHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAEL 173
Query: 146 GFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVL 205
G E A+ + +M +G +PD FT VL AC +G + G+ IH + + + +VL
Sbjct: 174 GQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVL 233
Query: 206 SGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIR 265
+ LV MYAKCGD+V AR VF+ ++ WN+M++G+ +G E L+ F M I
Sbjct: 234 NALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIE 293
Query: 266 PDAITFLTVLS 276
PD + +VL+
Sbjct: 294 PDKVAISSVLA 304
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 121/250 (48%), Gaps = 11/250 (4%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNG---DTATARRLFD 61
+V NA++ Y + GD+ A VF+ +P K V+W+ M+ G+ +G + RL
Sbjct: 229 DVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMV 288
Query: 62 EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAE 121
+ E V +V+ + K + V E V ++++ Y K+G + +A
Sbjct: 289 QNGIEPDKVAISSVLARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQAC 348
Query: 122 TIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLG 181
IF ++ R WN +I+ + +N G L+ FE+M +PD T VSVLS CA G
Sbjct: 349 FIFDQMLERDTVSWNAIISAHSKNSNG---LKYFEQMHRANAKPDGITFVSVLSLCANTG 405
Query: 182 LLDAGKQIHHMIEHKRLTVNPFV--LSGLVDMYAKCGDLVNAR--LVFEGFTQRNICCWN 237
+++ G+++ ++ K ++P + + +V++Y + G + A +V E + W
Sbjct: 406 MVEDGERLFSLMS-KEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWG 464
Query: 238 AMISGFAING 247
A++ ++G
Sbjct: 465 ALLYACYLHG 474
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 115/240 (47%), Gaps = 16/240 (6%)
Query: 164 EPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARL 223
EP+ F S+L C L +D G ++HH+I L N + S LV +YA CG A
Sbjct: 91 EPEIFA--SLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHE 148
Query: 224 VFEGFTQRNIC--CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHG 281
VF+ ++R+ WN++ISG+A G+ + + + +M ++PD TF VL AC G
Sbjct: 149 VFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKAC--G 206
Query: 282 GL----LSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETV 337
G+ + EA+ E + ++ + +V + + G + +A ++ +P + +
Sbjct: 207 GIGSVQIGEAIHRDLVKEGFGYDVYV--LNALVVMYAKCGDIVKARNVFDMIPHK-DYVS 263
Query: 338 LGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMV 397
+ML H + A + +L+ N I + V +S++ A ++ ++ G ++
Sbjct: 264 WNSMLTGYLHHGLLHEALDIFRLMVQNGI---EPDKVAISSVLARVLSFKHGRQLHGWVI 320
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 181/385 (47%), Gaps = 44/385 (11%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
+ V ++ Y++ +ESA VF++ K +W+ + G+A +G T AR LFD P
Sbjct: 297 DTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMP 356
Query: 65 HELKGVVTWTVMVDGYARKGEMEAAREVFELMPER------------------------- 99
+ +V+W M+ GY E + A + LM +
Sbjct: 357 E--RNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMG 414
Query: 100 --------------NCFVWSSMVSGYCKKGSVAEAETIFGRIP-VRSLEIWNTMIAGYVQ 144
N V ++++ Y K G++ A F ++ +R WN ++ G +
Sbjct: 415 KQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVAR 474
Query: 145 NGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFV 204
G E+AL FE M+ E +P ++T+ ++L+ CA + L+ GK IH + ++ +
Sbjct: 475 VGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVI 533
Query: 205 LSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNI 264
+VDMY+KC A VF+ R++ WN++I G NG+ +EV E F +EN +
Sbjct: 534 RGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGV 593
Query: 265 RPDAITFLTVLSACAHGGLLSEALEVISKMEA-YAIEMGIKHYGCMVDLLGRAGRLKEAY 323
+PD +TFL +L AC G + + S M Y I ++HY CM++L + G L +
Sbjct: 594 KPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLE 653
Query: 324 DLIKRMPMEPNETVLGAMLGACRTH 348
+ + MP +P +L + AC+ +
Sbjct: 654 EFLLLMPFDPPMQMLTRINDACQRY 678
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 156/334 (46%), Gaps = 20/334 (5%)
Query: 7 VTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHE 66
V+WN ++ Y+ G + A ++F +M + + A +R L E
Sbjct: 229 VSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVM----LACSRSLALEVGKV 284
Query: 67 LKGV----------VTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGS 116
+ + V T + D Y + +E+AR VF+ ++ W+S +SGY G
Sbjct: 285 IHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGL 344
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
EA +F +P R++ WN M+ GYV + AL MR E D T+V +L+
Sbjct: 345 TREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNV 404
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ-RNICC 235
C+ + + GKQ H I N V + L+DMY KCG L +A + F ++ R+
Sbjct: 405 CSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVS 464
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLS--EALEVISK 293
WNA+++G A G+ + L FF M+ + +P T T+L+ CA+ L+ +A+
Sbjct: 465 WNALLTGVARVGRSEQALSFFEGMQ-VEAKPSKYTLATLLAGCANIPALNLGKAIHGFLI 523
Query: 294 MEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIK 327
+ Y I++ I+ G MVD+ + A ++ K
Sbjct: 524 RDGYKIDVVIR--GAMVDMYSKCRCFDYAIEVFK 555
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 140/301 (46%), Gaps = 14/301 (4%)
Query: 2 PERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFD 61
P + N I Y + G ++ A +FEEMP + G +W+ +I A+NG + R+F
Sbjct: 92 PLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFR 151
Query: 62 EAPHE--------LKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCK 113
+ GV+ ++ ++ A V + N + +S+V Y K
Sbjct: 152 RMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCA--VVKYGYSGNVDLETSIVDVYGK 209
Query: 114 KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSV 173
+++A +F I S WN ++ Y++ GF + A+ F +M P TV SV
Sbjct: 210 CRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSV 269
Query: 174 LSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNI 233
+ AC++ L+ GK IH + + + V + + DMY KC L +AR VF+ +++
Sbjct: 270 MLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDL 329
Query: 234 CCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISK 293
W + +SG+A++G RE E F M NI +++ +L H EAL+ ++
Sbjct: 330 KSWTSAMSGYAMSGLTREARELFDLMPERNI----VSWNAMLGGYVHAHEWDEALDFLTL 385
Query: 294 M 294
M
Sbjct: 386 M 386
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 4/207 (1%)
Query: 97 PERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFE 156
P F+ + + Y K G V +A +F +P R WN +I QNG + + F
Sbjct: 92 PLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFR 151
Query: 157 EMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCG 216
M +G E + VL +C + L +Q+H + + N + + +VD+Y KC
Sbjct: 152 RMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCR 211
Query: 217 DLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLS 276
+ +AR VF+ + WN ++ + G E + F +M LN+RP T +V+
Sbjct: 212 VMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVML 271
Query: 277 ACAHGGLLSEALEVISKMEAYAIEMGI 303
AC+ S ALEV + A A+++ +
Sbjct: 272 ACSR----SLALEVGKVIHAIAVKLSV 294
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 133/503 (26%), Positives = 215/503 (42%), Gaps = 109/503 (21%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
+P++N +TWN + G +NG + +A +F+EMP + V+W+ MI G G R+F
Sbjct: 65 IPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVF 124
Query: 61 DEA------PHELK-----------------------------GVVTWTVMVDGYARKGE 85
+ P E +V W ++D Y R G
Sbjct: 125 FDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGV 184
Query: 86 MEAAREVFELMPER-----NCFVWS-----------------------------SMVSGY 111
+ A VF M +R NC + S SMV
Sbjct: 185 FDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSI 244
Query: 112 CK------KGSVAEAETI-----------------FGRIP--------VRSLEIW----- 135
C KG A A I F + R LE W
Sbjct: 245 CSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLC 304
Query: 136 NTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEH 195
N+MI Y + GE AL+ F + PD+FT SVLS+ + +LD G +H ++
Sbjct: 305 NSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIK 363
Query: 196 KRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEF 255
++ V + L++MY K G + A VF +++ WN +I G A N + E L
Sbjct: 364 LGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAI 423
Query: 256 FGRM-ENLNIRPDAITFLTVLSACAHGGLLSEALEVISKME-AYAIEMGIKHYGCMVDLL 313
F ++ N +++PD +T + +L AC + G ++E +++ S ME A+ + G +HY C+++LL
Sbjct: 424 FNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELL 483
Query: 314 GRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADSHN 373
R G + EA D+ ++P EP+ + +L A D ++AE V K + S ++
Sbjct: 484 CRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTM-LESEPKSSFPY 542
Query: 374 VLLSNIYAASEKWEKAEKMRGIM 396
++L IY + +WE + K+R M
Sbjct: 543 LVLIKIYEMTWRWENSVKLRYAM 565
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 132/305 (43%), Gaps = 39/305 (12%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKG 69
N + Y ++G + +A +F+++P K +TW+ + G +NG A LFDE P +
Sbjct: 43 NRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPE--RD 100
Query: 70 VVTWTVMVDGYARKGEMEAAREVF------ELMPER------------------------ 99
VV+W M+ G G E VF E+ P
Sbjct: 101 VVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAI 160
Query: 100 -------NCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERAL 152
N VW+S++ Y + G A ++F + R + WN +I +G E AL
Sbjct: 161 CSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVAL 220
Query: 153 QAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMY 212
F MR +PDE+TV V+S C+ L L GKQ + N VL +DM+
Sbjct: 221 DQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMF 280
Query: 213 AKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFL 272
+KC L ++ +F + + N+MI ++ + + L F ++RPD TF
Sbjct: 281 SKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFS 340
Query: 273 TVLSA 277
+VLS+
Sbjct: 341 SVLSS 345
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 141/295 (47%), Gaps = 19/295 (6%)
Query: 80 YARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMI 139
Y + G + A ++F+ +P++N W+ + G K G + A +F +P R + WNTMI
Sbjct: 49 YFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMI 108
Query: 140 AGYVQNGFGERALQAFEEMRAEGFEPDEFT--VVSVLSACAQLGLLDAGKQIH-HMIEHK 196
+G V GF E ++ F +M+ P EFT +++ L C + G+QIH + I
Sbjct: 109 SGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVR-----HGEQIHGNAICSG 163
Query: 197 RLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFF 256
N V + ++DMY + G A VF R++ WN +I + +G L+ F
Sbjct: 164 VSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQF 223
Query: 257 GRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKH----YGCMVDL 312
M + I+PD T V+S C+ LS+ + + A I+MG G +D+
Sbjct: 224 WLMREMEIQPDEYTVSMVVSICSDLRELSKGKQAL----ALCIKMGFLSNSIVLGAGIDM 279
Query: 313 LGRAGRLKEAYDLIKRMPMEPNETVL-GAMLGACRTHSDMKMAEQVIKLIGTNSI 366
+ RL ++ L + +E ++VL +M+G+ H + A ++ L T S+
Sbjct: 280 FSKCNRLDDSVKLFRE--LEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSV 332
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 210/479 (43%), Gaps = 101/479 (21%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEM---------------------PGKT--- 36
MPERNVV+W A+I+GY++ G+ + +F M PGK
Sbjct: 122 MPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFPNEFTLSSVLTSCRYEPGKQVHG 181
Query: 37 -----GVTWS-----QMIGGFARNGDTATARR---LFDEAPHELKGVVTWTVMVD----- 78
G+ S +I + R D A A +F+ + K +VTW M+
Sbjct: 182 LALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAI--KFKNLVTWNSMIAAFQCC 239
Query: 79 ------------------GYARKGEMEAAREVF---ELMPERNCFVWSSMVSGYCKKGSV 117
G+ R + ++ +L+P + S K G V
Sbjct: 240 NLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLV 299
Query: 118 AEAETIFGRIPV---------------------RSLEIWNTMIAGYVQNGFGERALQAFE 156
+ E I V R + WN +I + ERA+ F
Sbjct: 300 TQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFG 358
Query: 157 EMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCG 216
++R E PD +T SVL ACA L IH + + + + L+ YAKCG
Sbjct: 359 QLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCG 418
Query: 217 DLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLS 276
L VF+ R++ WN+M+ ++++G+ +L F +M+ I PD+ TF+ +LS
Sbjct: 419 SLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD---INPDSATFIALLS 475
Query: 277 ACAHGGLLSEALEVISKM-EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNE 335
AC+H G + E L + M E + HY C++D+L RA R EA ++IK+MPM+P+
Sbjct: 476 ACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDA 535
Query: 336 TVLGAMLGACRTHSDMKM----AEQVIKLI-GTNSITRADSHNVLLSNIYAASEKWEKA 389
V A+LG+CR H + ++ A+++ +L+ TNS++ + +SNIY A + +A
Sbjct: 536 VVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSY-----IQMSNIYNAEGSFNEA 589
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 172/385 (44%), Gaps = 44/385 (11%)
Query: 4 RNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDE- 62
+NV+ N +I+ Y + G++ A VF+ MP + V+W+ +I G+ + G+ LF
Sbjct: 94 QNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM 153
Query: 63 APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGY--CKKGSVA-E 119
H T + ++ + + +L + +V ++++S Y C G+ A E
Sbjct: 154 LSHCFPNEFTLSSVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYE 213
Query: 120 AETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQ 179
A T+F I ++L WN+MIA + G++A+ F M ++G D T++++ S+ +
Sbjct: 214 AWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYK 273
Query: 180 LGLLDAGK------QIHHMIEHKRLTVNPFVLSGLVDMYAK-CGDLVNARLVFEGFTQ-R 231
L + Q+H + L V + L+ +Y++ D + +F + R
Sbjct: 274 SSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCR 333
Query: 232 NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA------------ 279
+I WN +I+ FA+ R + FG++ + PD TF +VL ACA
Sbjct: 334 DIVAWNGIITAFAVYDPERAI-HLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIH 392
Query: 280 ----HGGLLSEALEVISKMEAYA----IEMGIK-----------HYGCMVDLLGRAGRLK 320
GG L++ + S + AYA +++ ++ + M+ G++
Sbjct: 393 AQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVD 452
Query: 321 EAYDLIKRMPMEPNETVLGAMLGAC 345
+ ++M + P+ A+L AC
Sbjct: 453 SILPVFQKMDINPDSATFIALLSAC 477
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 115/286 (40%), Gaps = 76/286 (26%)
Query: 32 MPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELKG---------------------- 69
+P + + + R+GD A LF AP EL+
Sbjct: 21 LPSALKREFVEGLRTLVRSGDIRRAVSLFYSAPVELQSQQAYAALFQACAEQRNLLDGIN 80
Query: 70 ---------------VVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKK 114
V+ +++ YA+ G + AR+VF+ MPERN W+++++GY +
Sbjct: 81 LHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQ- 139
Query: 115 GSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVL 174
AG Q GF F M + F P+EFT+ SVL
Sbjct: 140 -------------------------AGNEQEGFC-----LFSSMLSHCF-PNEFTLSSVL 168
Query: 175 SACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGD---LVNARLVFEGFTQR 231
++C + GKQ+H + L + +V + ++ MY +C D A VFE +
Sbjct: 169 TSCR----YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFK 224
Query: 232 NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSA 277
N+ WN+MI+ F ++ + F RM + + D T L + S+
Sbjct: 225 NLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSS 270
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 5/140 (3%)
Query: 143 VQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACA-QLGLLDAGKQIHHMIEHKRLTVN 201
V++G RA+ F E + ++ ACA Q LLD HHM+ H
Sbjct: 37 VRSGDIRRAVSLFYSAPVELQSQQAYA--ALFQACAEQRNLLDGINLHHHMLSHPYCYSQ 94
Query: 202 PFVLSG-LVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRME 260
+L+ L++MYAKCG+++ AR VF+ +RN+ W A+I+G+ G +E F M
Sbjct: 95 NVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSML 154
Query: 261 NLNIRPDAITFLTVLSACAH 280
+ + P+ T +VL++C +
Sbjct: 155 S-HCFPNEFTLSSVLTSCRY 173
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 206/438 (47%), Gaps = 42/438 (9%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEM------PGKTGVT--------------- 39
MP+ +V++WN+++SGY+++G + +F E+ P + T
Sbjct: 116 MPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLG 175
Query: 40 ---WSQMIGGFARNGDTATARRLFDEAPH--------------ELKGVVTWTVMVDGYAR 82
S+++ G+ L D E K V+W +V +R
Sbjct: 176 ACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSR 235
Query: 83 KGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGY 142
G++E F MP + ++ ++ + K G A + +P + WNT++ GY
Sbjct: 236 NGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGY 295
Query: 143 VQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNP 202
V + A + F +M + G DE+++ VL+A A L ++ G IH L
Sbjct: 296 VNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRV 355
Query: 203 FVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENL 262
V S L+DMY+KCG L +A L+F ++N+ WN MISG+A NG E ++ F +++
Sbjct: 356 VVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQE 415
Query: 263 N-IRPDAITFLTVLSACAHGGLLSEALEVISKM--EAYAIEMGIKHYGCMVDLLGRAGRL 319
++PD TFL +L+ C+H + E + +M Y I+ ++H ++ +G+ G +
Sbjct: 416 RFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEV 475
Query: 320 KEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQV-IKLIGTNSITRADSHNVLLSN 378
+A +I+ + A+LGAC D+K A+ V K+I + + +++SN
Sbjct: 476 WQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSN 535
Query: 379 IYAASEKWEKAEKMRGIM 396
+YA E+W + ++R IM
Sbjct: 536 LYAYHERWREVGQIRKIM 553
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 128/264 (48%), Gaps = 14/264 (5%)
Query: 39 TWSQMIGGFARNGDTATAR---RLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFEL 95
+WS ++ AR G R L ++ + + V G G + R++
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELINDGEKPDASPLVHLLRVSG--NYGYVSLCRQLHGY 80
Query: 96 MPER----NCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERA 151
+ + N + +S++ Y S+ +A +F +P + WN++++GYVQ+G +
Sbjct: 81 VTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEG 140
Query: 152 LQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTV-NPFVLSGLVD 210
+ F E+ P+EF+ + L+ACA+L L G IH + L N V + L+D
Sbjct: 141 ICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLID 200
Query: 211 MYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAIT 270
MY KCG + +A LVF+ +++ WNA+++ + NGK L FF +M N PD +T
Sbjct: 201 MYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPN----PDTVT 256
Query: 271 FLTVLSACAHGGLLSEALEVISKM 294
+ ++ A G + A +V+S M
Sbjct: 257 YNELIDAFVKSGDFNNAFQVLSDM 280
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 103/220 (46%), Gaps = 3/220 (1%)
Query: 135 WNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIE 194
W+T++ + G L+A E+ +G +PD +V +L G + +Q+H +
Sbjct: 24 WSTIVPALARFG-SIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVT 82
Query: 195 HKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLE 254
N + + L+ Y L +A VF+ ++ WN+++SG+ +G+ +E +
Sbjct: 83 KHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGIC 142
Query: 255 FFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYG-CMVDLL 313
F + ++ P+ +F L+ACA L + SK+ +E G G C++D+
Sbjct: 143 LFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMY 202
Query: 314 GRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKM 353
G+ G + +A + + M E + A++ +C + +++
Sbjct: 203 GKCGFMDDAVLVFQHME-EKDTVSWNAIVASCSRNGKLEL 241
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 187/410 (45%), Gaps = 42/410 (10%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
N+ +A+I Y + +MESA + E M V+W+ MI G R G A +F
Sbjct: 261 NIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMH 320
Query: 65 HELKGVVTWTV--MVDGYA-RKGEMEAAREVFELMPERNC----FVWSSMVSGYCKKGSV 117
+ +T+ +++ +A + EM+ A L+ + V +++V Y K+G +
Sbjct: 321 ERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIM 380
Query: 118 AEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSAC 177
A +F + + + W ++ G NG + AL+ F MR G PD+ SVLSA
Sbjct: 381 DSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSAS 440
Query: 178 AQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWN 237
A+L LL+ G+Q+H + V + LV MY KCG L +A ++F R++ W
Sbjct: 441 AELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWT 500
Query: 238 AMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAY 297
+I G+A NG + +F M + Y
Sbjct: 501 CLIVGYAKNGLLEDAQRYFDSMRTV----------------------------------Y 526
Query: 298 AIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQV 357
I G +HY CM+DL GR+G + L+ +M +EP+ TV A+L A R H +++ E+
Sbjct: 527 GITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERA 586
Query: 358 IKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDGESEKIAGC 407
K + A + V LSN+Y+A+ + ++A +R +M K GC
Sbjct: 587 AKTLMELEPNNAVPY-VQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGC 635
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 168/346 (48%), Gaps = 26/346 (7%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
MPER+ TWN MI Y + + A +F P K ++W+ +I G+ ++G A LF
Sbjct: 54 MPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLF 113
Query: 61 DE------APHE------LKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMV 108
E P+E L+ + +++ G G + F+L + V + ++
Sbjct: 114 WEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGH--TIKTGFDL----DVNVVNGLL 167
Query: 109 SGYCKKGSVAEAETIFGRIPVRSLEI-WNTMIAGYVQNGFGERALQAFEEMRAEGFEPDE 167
+ Y + ++EAE +F + + W +M+ GY QNGF +A++ F ++R EG + ++
Sbjct: 168 AMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQ 227
Query: 168 FTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEG 227
+T SVL+ACA + G Q+H I N +V S L+DMYAKC ++ +AR + EG
Sbjct: 228 YTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEG 287
Query: 228 FTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEA 287
++ WN+MI G G E L FGRM +++ D T ++L+ A L
Sbjct: 288 MEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFA---LSRTE 344
Query: 288 LEVISKMEAYAIEMGIKHY----GCMVDLLGRAGRLKEAYDLIKRM 329
+++ S ++ G Y +VD+ + G + A + + M
Sbjct: 345 MKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGM 390
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 141/260 (54%), Gaps = 1/260 (0%)
Query: 74 TVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLE 133
+++ ++ G ++ AR++F+ MPER+ F W++M+ Y +++AE +F PV++
Sbjct: 32 NLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTI 91
Query: 134 IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMI 193
WN +I+GY ++G A F EM+++G +P+E+T+ SVL C L LL G+QIH
Sbjct: 92 SWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHT 151
Query: 194 EHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT-QRNICCWNAMISGFAINGKCREV 252
++ V++GL+ MYA+C + A +FE ++N W +M++G++ NG +
Sbjct: 152 IKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKA 211
Query: 253 LEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDL 312
+E F + + + TF +VL+ACA ++V + + I ++D+
Sbjct: 212 IECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDM 271
Query: 313 LGRAGRLKEAYDLIKRMPME 332
+ ++ A L++ M ++
Sbjct: 272 YAKCREMESARALLEGMEVD 291
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 111/256 (43%), Gaps = 28/256 (10%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
M E++V++W A+++G NG + A +F M G+T +++ + F
Sbjct: 390 MIEKDVISWTALVTGNTHNGSYDEALKLFCNMR-VGGITPDKIVTASVLSASAELTLLEF 448
Query: 61 DEAPH--ELKGVVTWTVMVDG-----YARKGEMEAAREVFELMPERNCFVWSSMVSGYCK 113
+ H +K ++ V+ Y + G +E A +F M R+ W+ ++ GY K
Sbjct: 449 GQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAK 508
Query: 114 KGSVAEAE-------TIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
G + +A+ T++G P E + MI + ++G + Q +M EPD
Sbjct: 509 NGLLEDAQRYFDSMRTVYGITP--GPEHYACMIDLFGRSGDFVKVEQLLHQMEV---EPD 563
Query: 167 EFTVVSVLSACAQLGLLDAGKQ-IHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVF 225
++L+A + G ++ G++ ++E + P+V L +MY+ G A V
Sbjct: 564 ATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYV--QLSNMYSAAGRQDEAANVR 621
Query: 226 EGFTQRNI-----CCW 236
RNI C W
Sbjct: 622 RLMKSRNISKEPGCSW 637
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 73/171 (42%), Gaps = 6/171 (3%)
Query: 173 VLSACAQLGLLDAGKQI-HHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQR 231
+L ++ G +D +Q+ M E T N +++ Y+ L +A +F +
Sbjct: 34 LLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVA-----YSNSRRLSDAEKLFRSNPVK 88
Query: 232 NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVI 291
N WNA+ISG+ +G E F M++ I+P+ T +VL C LL ++
Sbjct: 89 NTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIH 148
Query: 292 SKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAML 342
++ + ++ + + R+ EA L + M E N +ML
Sbjct: 149 GHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSML 199
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 178/344 (51%), Gaps = 7/344 (2%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF-DEAPHELK 68
N +IS +R GD+ A VF+ MP K VTW+ MI G+ + G A LF D H ++
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 69 GV--VTWTVMVDGYARKGEMEAAREVFELMPER---NCFVWSSMVSGYCKKGSVAEAETI 123
+ +++ +R+ E E R+V M + N V SS+V Y + G + A
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRA 240
Query: 124 FGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLL 183
F + + + W +I+ + G G +A+ F M F P+EFTV S+L AC++ L
Sbjct: 241 FDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKAL 300
Query: 184 DAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGF 243
G+Q+H ++ + + + FV + L+DMYAKCG++ + R VF+G + RN W ++I+
Sbjct: 301 RFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAH 360
Query: 244 AINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGI 303
A G E + F M+ ++ + +T +++L AC G L E+ +++ +IE +
Sbjct: 361 AREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNV 420
Query: 304 KHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRT 347
+V L + G ++A+++++++P + AM+ C +
Sbjct: 421 YIGSTLVWLYCKCGESRDAFNVLQQLP-SRDVVSWTAMISGCSS 463
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 145/296 (48%), Gaps = 9/296 (3%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
M + +V +++ Y + G++ VF+ M + VTW+ +I AR G A LF
Sbjct: 314 MIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLF 373
Query: 61 D--EAPHELKGVVTWTVMVDGYARKGEMEAARE----VFELMPERNCFVWSSMVSGYCKK 114
+ H + +T ++ G + +E + + E+N ++ S++V YCK
Sbjct: 374 RIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKC 433
Query: 115 GSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVL 174
G +A + ++P R + W MI+G G AL +EM EG EP+ FT S L
Sbjct: 434 GESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSAL 493
Query: 175 SACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNIC 234
ACA L G+ IH + + N FV S L+ MYAKCG + A VF+ ++N+
Sbjct: 494 KACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLV 553
Query: 235 CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGL-LSEALE 289
W AMI G+A NG CRE L+ RME D F T+LS C G + L EA+E
Sbjct: 554 SWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC--GDIELDEAVE 607
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 185/433 (42%), Gaps = 93/433 (21%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTW-------------------- 40
MPE+N VTW AMI GY++ G + A +FE+ K G+ +
Sbjct: 143 MPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYV-KHGIRFTNERMFVCLLNLCSRRAEFE 201
Query: 41 --------------------SQMIGGFARNGDTATARRLFDEAPHELKGVVTWTVMVDGY 80
S ++ +A+ G+ +A R FD E K V++WT ++
Sbjct: 202 LGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDMM--EEKDVISWTAVISAC 259
Query: 81 ARKGE-----------------------------------MEAAREVFELMPER----NC 101
+RKG + R+V L+ +R +
Sbjct: 260 SRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDV 319
Query: 102 FVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAE 161
FV +S++ Y K G +++ +F + R+ W ++IA + + GFGE A+ F M+
Sbjct: 320 FVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRR 379
Query: 162 GFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA 221
+ TVVS+L AC +G L GK++H I + N ++ S LV +Y KCG+ +A
Sbjct: 380 HLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDA 439
Query: 222 RLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHG 281
V + R++ W AMISG + G E L+F M + P+ T+ + L ACA+
Sbjct: 440 FNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANS 499
Query: 282 G--LLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLG 339
L+ ++ I+K + + ++ + + G + EA+ + MP E N
Sbjct: 500 ESLLIGRSIHSIAKKNHALSNVFVG--SALIHMYAKCGFVSEAFRVFDSMP-EKNLVSWK 556
Query: 340 AML------GACR 346
AM+ G CR
Sbjct: 557 AMIMGYARNGFCR 569
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 150/325 (46%), Gaps = 11/325 (3%)
Query: 10 NAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPHE--L 67
+ +I Y + GDM S VF + ++W+ ++ G+A NG A R E
Sbjct: 356 SGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFR 415
Query: 68 KGVVTWTVMVDGYARKGEMEAAREVF------ELMPERNCFVWSSMVSGYCKKGSVAEAE 121
VVT ++ A ++ +E+ +P N + +S++ Y K G
Sbjct: 416 PDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLP--NVSLVTSLMVMYSKCGVPEYPI 473
Query: 122 TIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLG 181
+F R+ R+++ W MI YV+N ++ F M PD T+ VL+ C+ L
Sbjct: 474 RLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLK 533
Query: 182 LLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMIS 241
L GK++H I K PFV + ++ MY KCGDL +A F+ + W A+I
Sbjct: 534 ALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIE 593
Query: 242 GFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM-EAYAIE 300
+ N R+ + F +M + P+ TF VLS C+ G + EA + M Y ++
Sbjct: 594 AYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQ 653
Query: 301 MGIKHYGCMVDLLGRAGRLKEAYDL 325
+HY +++LL R GR++EA L
Sbjct: 654 PSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 150/327 (45%), Gaps = 23/327 (7%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
+V +++ Y + G + A VF+E+ + V W MI G A N A LF
Sbjct: 248 SVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMI 307
Query: 65 HELKGVVTWTVMVDGYARKGEMEA---AREVF-ELMPERNC----FVWSSMVSGYCKKGS 116
E K ++ G+++A +EV ++ +N FV S ++ YCK G
Sbjct: 308 SEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGD 367
Query: 117 VAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+A +F R+ W +++GY NG ++AL++ M+ EGF PD T+ +VL
Sbjct: 368 MASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPV 427
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
CA+L + GK+IH N +++ L+ MY+KCG +F+ QRN+ W
Sbjct: 428 CAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAW 487
Query: 237 NAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA-----------HGGLLS 285
AMI + N R +E F M RPD++T VL+ C+ HG +L
Sbjct: 488 TAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILK 547
Query: 286 EALEVISKMEAYAIEMGIKHYGCMVDL 312
+ E I + A I+M YG DL
Sbjct: 548 KEFESIPFVSARIIKM----YGKCGDL 570
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 135/299 (45%), Gaps = 12/299 (4%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQM-----IGGFARNGDTATAR 57
E N ++ Y G ++ A VF+E +W+ + I G R D +
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 58 RLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCK 113
E +L V + + + +A + + L + + F+ +S+V Y K
Sbjct: 203 TEMRELGVDL-NVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFK 261
Query: 114 KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAE-GFEPDEFTVVS 172
G V A +F I R + +W MIAG N AL F M +E P+ + +
Sbjct: 262 CGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTT 321
Query: 173 VLSACAQLGLLDAGKQIH-HMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQR 231
+L + L GK++H H+++ K PFV SGL+D+Y KCGD+ + R VF G QR
Sbjct: 322 ILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQR 381
Query: 232 NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEV 290
N W A++SG+A NG+ + L M+ RPD +T TVL CA + + E+
Sbjct: 382 NAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEI 440
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 144 QNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPF 203
QN E AL + + G + T ++L AC + L GKQ+H I L N F
Sbjct: 89 QNNL-EVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEF 147
Query: 204 VLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCR--EVLEFFGRMEN 261
+ + LV MY CG + +A+ VF+ T N+ WNA++ G I+GK R +VL F M
Sbjct: 148 LRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRE 207
Query: 262 LNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHY----GCMVDLL---G 314
L + + + V + A L + L K A AI+ G+ + +VD+ G
Sbjct: 208 LGVDLNVYSLSNVFKSFAGASALRQGL----KTHALAIKNGLFNSVFLKTSLVDMYFKCG 263
Query: 315 RAGRLKEAYDLIKRMPMEPNETVLGAMLG 343
+ G + +D I +E + V GAM+
Sbjct: 264 KVGLARRVFDEI----VERDIVVWGAMIA 288
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 171/357 (47%), Gaps = 12/357 (3%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
N+ N ++ Y GD+ + F +P K ++W+ ++ A G + LF +
Sbjct: 248 NIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQ 307
Query: 65 H--ELKGVVTWTVMVDGYARKGEMEAAREVFELMPE-----RNCFVWSSMVSGYCKKGSV 117
+ + + ++ +R ++++ +++ + + + V S+++ Y K +
Sbjct: 308 FWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGI 367
Query: 118 AEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSAC 177
+ ++ +P +LE N+++ + G + ++ F M EG DE T+ +VL A
Sbjct: 368 ENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKA- 426
Query: 178 AQLGL---LDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNIC 234
L L L + +H + V L+D Y K G +R VF+ NI
Sbjct: 427 LSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIF 486
Query: 235 CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM 294
C ++I+G+A NG + ++ M+ +N+ PD +T L+VLS C+H GL+ E + +
Sbjct: 487 CLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSL 546
Query: 295 EA-YAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACRTHSD 350
E+ Y I G K Y CMVDLLGRAG +++A L+ + + + ++L +CR H +
Sbjct: 547 ESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRN 603
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 157/343 (45%), Gaps = 20/343 (5%)
Query: 2 PERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF- 60
P V T N I +++G++ SA F+EM + VT++ +I G +R G + A L+
Sbjct: 42 PSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYA 101
Query: 61 -------DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCK 113
E+ V++ + + R+G ++ V L N FV S++V Y
Sbjct: 102 EMVSCGLRESASTFPSVLS-VCSDELFCREG-IQVHCRVISLGFGCNMFVRSALVGLYAC 159
Query: 114 KGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSV 173
V A +F + R+L + N ++ + Q G +R + + M EG + T +
Sbjct: 160 LRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYM 219
Query: 174 LSACAQLGLLDAGKQIHHMIEHKRLTV-NPFVLSGLVDMYAKCGDLVNARLVFEGFTQRN 232
+ C+ L+ GKQ+H ++ + N FV + LVD Y+ CGDL + F +++
Sbjct: 220 IRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKD 279
Query: 233 ICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVIS 292
+ WN+++S A G + L+ F +M+ RP F++ L+ C+ +
Sbjct: 280 VISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSG----K 335
Query: 293 KMEAYAIEMG-----IKHYGCMVDLLGRAGRLKEAYDLIKRMP 330
++ Y ++MG + ++D+ G+ ++ + L + +P
Sbjct: 336 QIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLP 378
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 170/359 (47%), Gaps = 23/359 (6%)
Query: 8 TWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLFDEA 63
T+N +I+ Y++ D V + M VT++ ++ +NG + A +LFDE
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
Query: 64 PHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKGSV 117
V +T ++ RKG M+ A +F+ + E+ + + + +++ G CK G +
Sbjct: 321 RERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEM 380
Query: 118 AEAETIFGRIPVRSLEI----WNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSV 173
AE + + + + I +NT+I GY + G + A ++ M +GF+ D FT ++
Sbjct: 381 GAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTI 440
Query: 174 LSACAQLGLLDAGKQ-IHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT--- 229
S +L D KQ + M+E + ++ + L+D+Y K G++ A+ +F +
Sbjct: 441 ASCFNRLKRYDEAKQWLFRMMEGG-VKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKG 499
Query: 230 -QRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEAL 288
Q N +N MI + GK +E + ME + PD+ T+ +++ + EA+
Sbjct: 500 VQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAM 559
Query: 289 EVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEA---YDLIKRMPMEPNETVLGAMLGA 344
+ S+M ++ Y M+ L +AG+ EA YD +KR + V A++G+
Sbjct: 560 RLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 131/279 (46%), Gaps = 24/279 (8%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARR 58
E +V + ++IS R G+M+ A L+F+E+ K + T+ +I G + G+ A
Sbjct: 326 ESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEI 385
Query: 59 LFDEAPHELKGV----VTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSG 110
L +E + KGV V + ++DGY RKG ++ A ++++M ++ + F +++ S
Sbjct: 386 LMNEM--QSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASC 443
Query: 111 YCKKGSVAEAETIFGRIPVRSLEI----WNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
+ + EA+ R+ +++ + +I Y + G E A + F EM ++G +P+
Sbjct: 444 FNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPN 503
Query: 167 EFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVF- 225
T ++ A + G + +++ +E + + + + L+ ++ A +F
Sbjct: 504 AITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFS 563
Query: 226 ----EGFTQRNICCWNAMISGFAINGKCREVLEFFGRME 260
+G Q N + MISG + GK E + M+
Sbjct: 564 EMGLKGLDQ-NSVTYTVMISGLSKAGKSDEAFGLYDEMK 601
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/376 (18%), Positives = 168/376 (44%), Gaps = 65/376 (17%)
Query: 70 VVTWTVMVDGYARKGEMEAAREVFE------LMPERNCFVWSSMVSGYCKK--------- 114
V + T++V+G R+GE+E ++++ + + PE + ++++++ Y K+
Sbjct: 224 VYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPE--AYTYNTIINAYVKQRDFSGVEGV 281
Query: 115 --------------------------GSVAEAETIFGRIPVRSLE----IWNTMIAGYVQ 144
G +++AE +F + R +E ++ ++I+ +
Sbjct: 282 LKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCR 341
Query: 145 NGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFV 204
G +RA F+E+ +G P +T +++ ++G + A + + + ++ K + + V
Sbjct: 342 KGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVV 401
Query: 205 LSGLVDMYAKCGDLVNARLVFE-----GFTQRNICCWNAMISGFAINGKCREVLEFFGRM 259
+ L+D Y + G + A ++++ GF Q ++ N + S F + E ++ RM
Sbjct: 402 FNTLIDGYCRKGMVDEASMIYDVMEQKGF-QADVFTCNTIASCFNRLKRYDEAKQWLFRM 460
Query: 260 ENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRL 319
++ +++ ++ G + EA + +M + ++ Y M+ + G++
Sbjct: 461 MEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKI 520
Query: 320 KEAYDLIKRMP---MEPNETVLGAML-GAC---RTHSDMKM-AEQVIKLIGTNSITRADS 371
KEA L M M+P+ +++ G C M++ +E +K + NS+T
Sbjct: 521 KEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVT---- 576
Query: 372 HNVLLSNIYAASEKWE 387
+ V++S + A + E
Sbjct: 577 YTVMISGLSKAGKSDE 592
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 101/222 (45%), Gaps = 24/222 (10%)
Query: 7 VTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRL--FDEAP 64
V +N +I GY R G ++ AS++++ M K F N + RL +DEA
Sbjct: 400 VVFNTLIDGYCRKGMVDEASMIYDVMEQK-----GFQADVFTCNTIASCFNRLKRYDEAK 454
Query: 65 HEL---------KGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGY 111
L V++T ++D Y ++G +E A+ +F M + N ++ M+ Y
Sbjct: 455 QWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAY 514
Query: 112 CKKGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDE 167
CK+G + EA + + ++ + ++I G + A++ F EM +G + +
Sbjct: 515 CKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNS 574
Query: 168 FTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLV 209
T ++S ++ G D ++ ++ K T++ V + L+
Sbjct: 575 VTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 93/213 (43%), Gaps = 8/213 (3%)
Query: 142 YVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVN 201
YV NG E L+ F+ M +G DE + + L A + +D +I + + +
Sbjct: 164 YVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKIT 223
Query: 202 PFVLSGLVDMYAKCGDLVNARLVFEGFTQRNI----CCWNAMISGFAINGKCREVLEFFG 257
+ L+ +V+ + G++ ++ + + F+ + I +N +I+ + V
Sbjct: 224 VYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLK 283
Query: 258 RMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAG 317
M+ + + +T+ ++ G +S+A ++ +M IE + Y ++ R G
Sbjct: 284 VMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKG 343
Query: 318 RLKEAYDLIKRMP---MEPNETVLGAML-GACR 346
+K A+ L + + P+ GA++ G C+
Sbjct: 344 NMKRAFLLFDELTEKGLSPSSYTYGALIDGVCK 376
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 160/347 (46%), Gaps = 23/347 (6%)
Query: 7 VTWNAMISGYMRNGDMESASLVFEEMPGKTGV-----TWSQMIGGFARNGDTATARRLFD 61
V+ N ++ G+ + G +E A +EM + G T++ ++ G + G A + D
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 62 EAPHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPERNC----FVWSSMVSGYCKKG 115
E V T+ ++ G + GE++ A EV + M R+C +++++S CK+
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 116 SVAEAE------TIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFT 169
V EA T G +P + +N++I G A++ FEEMR++G EPDEFT
Sbjct: 380 QVEEATELARVLTSKGILP--DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFT 437
Query: 170 VVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF- 228
++ + G LD + +E + + L+D + K A +F+
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
Query: 229 ---TQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLS 285
RN +N +I G + + + + +M +PD T+ ++L+ GG +
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIK 557
Query: 286 EALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME 332
+A +++ M + E I YG ++ L +AGR++ A L++ + M+
Sbjct: 558 KAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 176/415 (42%), Gaps = 52/415 (12%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
+V T+N +I R + A L+ E+MP + P
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPS-------------------------YGLVP 222
Query: 65 HELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSS-----MVSGYCKKGSVAE 119
E T+T ++ GY +G+++ A + E M E C WS+ +V G+CK+G V +
Sbjct: 223 DE----KTFTTVMQGYIEEGDLDGALRIREQMVEFGC-SWSNVSVNVIVHGFCKEGRVED 277
Query: 120 AETIF-------GRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVS 172
A G P + +NT++ G + G + A++ + M EG++PD +T S
Sbjct: 278 ALNFIQEMSNQDGFFPDQY--TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNS 335
Query: 173 VLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQR- 231
V+S +LG + ++ + + + N + L+ K + A + T +
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
Query: 232 ---NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEAL 288
++C +N++I G + R +E F M + PD T+ ++ + G L EAL
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455
Query: 289 EVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME---PNETVLGAML-GA 344
++ +ME + Y ++D +A + +EA ++ M + N ++ G
Sbjct: 456 NMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGL 515
Query: 345 CRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDG 399
C++ A+ + ++I ++N LL++ + + A+ ++ + +G
Sbjct: 516 CKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 145/348 (41%), Gaps = 48/348 (13%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARR 58
+ +V T+N++ISG + G+++ A V ++M + VT++ +I + A
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386
Query: 59 LFDEAPHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPERNC----FVWSSMVSGYC 112
L + L V T+ ++ G A E+FE M + C F ++ ++ C
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446
Query: 113 KKGSVAEAETIFGRIPV----RSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEF 168
KG + EA + ++ + RS+ +NT+I G+ + A + F+EM G +
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 506
Query: 169 TVVSVLSA-CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEG 227
T +++ C + DA + + MI + P D Y
Sbjct: 507 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ---KP-------DKYT-------------- 542
Query: 228 FTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEA 287
+N++++ F G ++ + M + PD +T+ T++S G + A
Sbjct: 543 --------YNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 288 LEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNE 335
+++ ++ I + Y ++ L R + EA +L + M +E NE
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREM-LEQNE 641
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 82/178 (46%), Gaps = 14/178 (7%)
Query: 4 RNVVTWNAMISGYMRNGDMESASLVFEEMP----GKTGVTWSQMIGGFARNGDTATARRL 59
R+V+T+N +I G+ + A +F+EM + VT++ +I G ++ A +L
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Query: 60 FDEAPHELK--GVVTWTVMVDGYARKGEMEAAREVFELMPERNC----FVWSSMVSGYCK 113
D+ E + T+ ++ + R G+++ A ++ + M C + +++SG CK
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587
Query: 114 KGSVAEAETIFGRIPVRSLEI----WNTMIAGYVQNGFGERALQAFEEMRAEGFEPDE 167
G V A + I ++ + + +N +I G + A+ F EM + P +
Sbjct: 588 AGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPD 645
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/316 (19%), Positives = 119/316 (37%), Gaps = 62/316 (19%)
Query: 62 EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAE 121
E E+ VV W M+D + K + + L+ + N K ++ A+
Sbjct: 132 ELQDEILSVVDW--MIDEFGLKPDTHFYNRMLNLLVDGNSL----------KLVEISHAK 179
Query: 122 -TIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQL 180
+++G P + +N +I + A+ E+M + G PDE T +V+ +
Sbjct: 180 MSVWGIKP--DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEE 237
Query: 181 GLLDAGKQIH-HMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW--- 236
G LD +I M+E C W
Sbjct: 238 GDLDGALRIREQMVEFG-------------------------------------CSWSNV 260
Query: 237 --NAMISGFAINGKCREVLEFFGRMENLN-IRPDAITFLTVLSACAHGGLLSEALEVISK 293
N ++ GF G+ + L F M N + PD TF T+++ G + A+E++
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 294 MEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM---PMEPNETVLGAMLGACRTHSD 350
M + + Y ++ L + G +KEA +++ +M PN ++ +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 351 MKMAEQVIKLIGTNSI 366
++ A ++ +++ + I
Sbjct: 381 VEEATELARVLTSKGI 396
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 165/366 (45%), Gaps = 31/366 (8%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMP----GKTGVTWSQMIGGFARNGDTATARR 58
E NVVT+N++I+GY GD+E + V M + VT++ +I G+ + G A
Sbjct: 258 ELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEH 317
Query: 59 LFDEAPHELKGVVT---WTVMVDGYARKGEMEAAREVFELMPE----RNCFVWSSMVSGY 111
+F E E K V + V++DGY R G++ A V + M E N + +S+++GY
Sbjct: 318 VF-ELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGY 376
Query: 112 CKKGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDE 167
CK G + EAE IF R+ SL+ +NT++ GY + G+ + AL+ ++M + P
Sbjct: 377 CKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTV 436
Query: 168 FTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEG 227
T +L +++G + M+ + + + S L++ K GD A ++E
Sbjct: 437 MTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWEN 496
Query: 228 FTQR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHG-- 281
R + N MISG K E E + +P T+ A +HG
Sbjct: 497 VLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTY----QALSHGYY 552
Query: 282 --GLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMP---MEPNET 336
G L EA V ME I I+ Y ++ + L + DL+ + + P
Sbjct: 553 KVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVA 612
Query: 337 VLGAML 342
GA++
Sbjct: 613 TYGALI 618
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 157/342 (45%), Gaps = 39/342 (11%)
Query: 81 ARKGEMEAAREV------FELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEI 134
RKGE A V FE+ P+ F S +V+ YC+ G+V +A +F + SL +
Sbjct: 201 VRKGENFVALHVYDQMISFEVSPD--VFTCSIVVNAYCRSGNVDKA-MVFAKETESSLGL 257
Query: 135 ------WNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQ 188
+N++I GY G E + M G + T S++ + GL++ +
Sbjct: 258 ELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEH 317
Query: 189 IHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF------TQRNICCWNAMISG 242
+ +++ K+L + + L+D Y + G + +A V + T IC N++I+G
Sbjct: 318 VFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTIC--NSLING 375
Query: 243 FAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMG 302
+ +G+ E + F RM + +++PD T+ T++ G + EAL++ +M +
Sbjct: 376 YCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPT 435
Query: 303 IKHYGCMVDLLGRAGRLKEAYDLIKRM---PMEPNE----TVLGAMLGACRTHSDMKMAE 355
+ Y ++ R G + L K M + +E T+L A+ + MK+ E
Sbjct: 436 VMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWE 495
Query: 356 QVI-KLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIM 396
V+ + + T++IT NV++S + K EK + + I+
Sbjct: 496 NVLARGLLTDTITL----NVMISGLC----KMEKVNEAKEIL 529
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 175/425 (41%), Gaps = 78/425 (18%)
Query: 6 VVTWNAMISGYMRNGDMESASLVFEEMPGKTGV-----TWSQMIGGFARNGDTATARRLF 60
V+T+N ++ GY R G L +M K GV + S ++ + GD A +L+
Sbjct: 436 VMTYNILLKGYSRIGAFHDV-LSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLW 494
Query: 61 DE--APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCF-------VWSSMVSGY 111
+ A L +T VM+ G + ME E E++ N F + ++ GY
Sbjct: 495 ENVLARGLLTDTITLNVMISGLCK---MEKVNEAKEILDNVNIFRCKPAVQTYQALSHGY 551
Query: 112 CKKGSVAEAETIF------GRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEP 165
K G++ EA + G P ++E++NT+I+G + + E+RA G P
Sbjct: 552 YKVGNLKEAFAVKEYMERKGIFP--TIEMYNTLISGAFKYRHLNKVADLVIELRARGLTP 609
Query: 166 DEFTVVSVLSACAQLGLLD-AGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCG-------- 216
T ++++ +G++D A MIE K +T+N + S + + +
Sbjct: 610 TVATYGALITGWCNIGMIDKAYATCFEMIE-KGITLNVNICSKIANSLFRLDKIDEACLL 668
Query: 217 --DLVNARLVFEGF----------------TQR----------------NICCWNAMISG 242
+V+ L+ G+ TQ+ N +N I+G
Sbjct: 669 LQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAG 728
Query: 243 FAINGKCREVLEFFGRMENLN-IRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEM 301
GK + + F + + + PD T+ ++ CA G +++A + +M I
Sbjct: 729 LCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIP 788
Query: 302 GIKHYGCMVDLLGRAGRLKEAYDLIKRMPME---PN----ETVLGAMLGACRTHSDMKMA 354
I Y ++ L + G + A L+ ++P + PN T++ ++ + M++
Sbjct: 789 NIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLK 848
Query: 355 EQVIK 359
E++I+
Sbjct: 849 EKMIE 853
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 112/259 (43%), Gaps = 44/259 (16%)
Query: 6 VVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF----- 60
V T+ A+I+G+ G ++ A EM K G+T + I + A LF
Sbjct: 611 VATYGALITGWCNIGMIDKAYATCFEMIEK-GITLNVNIC-------SKIANSLFRLDKI 662
Query: 61 DEAPHELKGVVTWTVMVDGYARKGE-MEA-----------AREVFELMPER----NCFVW 104
DEA L+ +V + +++ GY E +EA A V P++ N V+
Sbjct: 663 DEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVY 722
Query: 105 SSMVSGYCKKGSVAEAETIFGR-------IP---VRSLEIWNTMIAGYVQNGFGERALQA 154
+ ++G CK G + +A +F IP ++ I IAG + F R
Sbjct: 723 NVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLR---- 778
Query: 155 FEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAK 214
+EM +G P+ T +++ +LG +D +++ H + K +T N + L+D K
Sbjct: 779 -DEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVK 837
Query: 215 CGDLVNARLVFEGFTQRNI 233
G++ A + E ++ +
Sbjct: 838 SGNVAEAMRLKEKMIEKGL 856
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 155/311 (49%), Gaps = 22/311 (7%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGD-TATARRL 59
NVV +N +I+G +N D+ +A VF M K VT++ +I G + +G T AR L
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Query: 60 FDEAPHELK-GVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKK 114
D ++ V+ +T ++D + ++G + AR +++ M R N F ++S+++G+C
Sbjct: 243 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302
Query: 115 GSVAEAETIF------GRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEF 168
G + +A+ +F G P + +NT+I G+ ++ E ++ F EM +G D F
Sbjct: 303 GCLGDAKYMFDLMVSKGCFP--DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360
Query: 169 TVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF 228
T +++ Q G L+ +++ + + ++ + + L+D G + A ++ E
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Query: 229 TQR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLL 284
+ +I +N +I G K +E F + ++PDAI ++T++S GL
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQ 480
Query: 285 SEALEVISKME 295
EA ++ +M+
Sbjct: 481 READKLCRRMK 491
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 167/362 (46%), Gaps = 53/362 (14%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPG----KTGVTWSQMIGGFARNGDTATARRLF 60
++VT ++++G+ + + A + + M G V ++ +I G +N D A +F
Sbjct: 148 SIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVF 207
Query: 61 DEAPHELKGV----VTWTVMVDGYARKGE-MEAAREVFELMPER---NCFVWSSMVSGYC 112
E KG+ VT+ ++ G + G +AAR + +++ + N +++++ +
Sbjct: 208 --YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFV 265
Query: 113 KKGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEF 168
K+G++ EA ++ + RS+ +N++I G+ +G A F+ M ++G PD
Sbjct: 266 KEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVV 325
Query: 169 TVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF 228
T ++++ + ++ G ++ + ++ GLV GD F
Sbjct: 326 TYNTLITGFCKSKRVEDGMKLFCEMTYQ----------GLV------GD---------AF 360
Query: 229 TQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEAL 288
T +N +I G+ GK + F RM + + PD +T+ +L + G + +AL
Sbjct: 361 T------YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 414
Query: 289 EVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIK---RMPMEPNETVLGAML-GA 344
++ ++ +++ I Y ++ L R +LKEA+ L + R ++P+ M+ G
Sbjct: 415 VMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 474
Query: 345 CR 346
CR
Sbjct: 475 CR 476
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/287 (19%), Positives = 111/287 (38%), Gaps = 44/287 (15%)
Query: 149 ERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGL 208
+ A F EM P VL+ A++ D ++H +E+ ++ + + + L
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 209 VDMYAKCG-------------------DLVNARLVFEGFTQ------------------- 230
+ + +C +V + GF Q
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 231 -RNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALE 289
N+ +N +I+G N LE F ME IR DA+T+ T++S ++ G ++A
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 290 VISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM---PMEPNETVLGAMLGACR 346
++ M I+ + + ++D + G L EA +L K M + PN +++
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 347 THSDMKMAEQVIKL-IGTNSITRADSHNVLLSNIYAASEKWEKAEKM 392
H + A+ + L + ++N L++ + S++ E K+
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITG-FCKSKRVEDGMKL 346
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 174/375 (46%), Gaps = 24/375 (6%)
Query: 6 VVTWNAMISGYMRNG-DMESASLVFEEM----PGKTGVTWSQMIGGFARNGDTATARRLF 60
V+++NA++ +R+ ++ A VF+EM T++ +I GF G+ A LF
Sbjct: 169 VLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLF 228
Query: 61 DEAPHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMP----ERNCFVWSSMVSGYCKK 114
D+ + L VVT+ ++DGY + +++ ++ M E N ++ +++G C++
Sbjct: 229 DKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 288
Query: 115 GSVAEAETIFGRIPVRSLEI----WNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
G + E + + R + +NT+I GY + G +AL EM G P T
Sbjct: 289 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 348
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVF----- 225
S++ + + G ++ + + + L N + LVD +++ G + A V
Sbjct: 349 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 408
Query: 226 EGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLS 285
GF+ ++ +NA+I+G + GK + + M+ + PD +++ TVLS +
Sbjct: 409 NGFSP-SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD 467
Query: 286 EALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIK---RMPMEPNETVLGAML 342
EAL V +M I+ Y ++ R KEA DL + R+ + P+E A++
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527
Query: 343 GACRTHSDMKMAEQV 357
A D++ A Q+
Sbjct: 528 NAYCMEGDLEKALQL 542
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 161/363 (44%), Gaps = 54/363 (14%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARR 58
E N++++N +I+G R G M+ S V EM + VT++ +I G+ + G+ A
Sbjct: 272 EPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALV 331
Query: 59 LFDE-APHELK-GVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYC 112
+ E H L V+T+T ++ + G M A E + M R N ++++V G+
Sbjct: 332 MHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS 391
Query: 113 KKGSVAEAETIF------GRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
+KG + EA + G P S+ +N +I G+ G E A+ E+M+ +G PD
Sbjct: 392 QKGYMNEAYRVLREMNDNGFSP--SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Query: 167 EFTVVSVLSA-CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVF 225
+ +VLS C + +A + M+E + P ++
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEKG---IKPDTIT------------------- 487
Query: 226 EGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLS 285
++++I GF + +E + + M + + PD T+ +++A G L
Sbjct: 488 ----------YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLE 537
Query: 286 EALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME---PNETVLGAML 342
+AL++ ++M + + Y +++ L + R +EA L+ ++ E P++ ++
Sbjct: 538 KALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597
Query: 343 GAC 345
C
Sbjct: 598 ENC 600
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 164/361 (45%), Gaps = 43/361 (11%)
Query: 7 VTWNAMISGYMRNGDMESASLVFEEM--PGKTG--VTWSQMIGGFARNGDTATARRLFDE 62
VT+N +I GY + G+ A ++ EM G T +T++ +I + G+ A D+
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 63 APHELKGVV----TWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKK 114
++G+ T+T +VDG+++KG M A V M + + ++++++G+C
Sbjct: 371 M--RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 115 GSVAEAETIFGRIPVRSLEI----WNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
G + +A + + + L ++T+++G+ ++ + AL+ EM +G +PD T
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488
Query: 171 VSVLSA-CAQLGLLDAGKQIHHMIEHKRLTVNP--FVLSGLVDMYAKCGDLVNARLVFEG 227
S++ C Q +A M+ R+ + P F + L++ Y GDL A +
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEML---RVGLPPDEFTYTALINAYCMEGDLEKALQLHNE 545
Query: 228 FTQR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAH--- 280
++ ++ ++ +I+G + RE ++ P +T+ T++ C++
Sbjct: 546 MVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEF 605
Query: 281 ------------GGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKR 328
G+++EA +V M + Y M+ RAG +++AY L K
Sbjct: 606 KSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKE 665
Query: 329 M 329
M
Sbjct: 666 M 666
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 158/357 (44%), Gaps = 37/357 (10%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEM------PGKTGVTWSQMIGGFARNGDTATARR 58
+V+T+ ++I + G+M A ++M P + T++ ++ GF++ G A R
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNER--TYTTLVDGFSQKGYMNEAYR 401
Query: 59 LFDEAPHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYC 112
+ E VVT+ +++G+ G+ME A V E M E+ + +S+++SG+C
Sbjct: 402 VLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC 461
Query: 113 KKGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEF 168
+ V EA + + + ++ ++++I G+ + + A +EEM G PDEF
Sbjct: 462 RSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF 521
Query: 169 TVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA-RLVFEG 227
T ++++A G L+ Q+H+ + K + + S L++ K A RL+ +
Sbjct: 522 TYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Query: 228 FTQRNIC-----------CWN-------AMISGFAINGKCREVLEFFGRMENLNIRPDAI 269
F + ++ C N ++I GF + G E + F M N +PD
Sbjct: 582 FYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGT 641
Query: 270 TFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLI 326
+ ++ G + +A + +M + +V L + G++ E +I
Sbjct: 642 AYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVI 698
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 175/370 (47%), Gaps = 24/370 (6%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMP----GKTGVTWSQMIGGFARNGDTATARR 58
E + T+N +I G G + A ++ + M VT++ ++ G R+GDT+ A
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 59 LFD--EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYC 112
L E + V T++ ++D R G ++AA +F+ M + + ++S+V G C
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 113 KKGSVAEAETIF----GRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEF 168
K G + + R V ++ +N ++ +V+ G + A + ++EM G P+
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 169 TVVSVLSA-CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEG 227
T +++ C Q L +A + M+ +K + + + L+ Y + + VF
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNK-CSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393
Query: 228 FTQR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGL 283
++R N ++ ++ GF +GK + E F M + + PD +T+ +L G
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453
Query: 284 LSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMP---MEPNETVLGA 340
L +ALE+ ++ +++GI Y +++ + + G++++A++L +P ++PN
Sbjct: 454 LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 513
Query: 341 ML-GACRTHS 349
M+ G C+ S
Sbjct: 514 MISGLCKKGS 523
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 166/379 (43%), Gaps = 27/379 (7%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTG----VTWSQMIGGFARNGDTATARRLF 60
+VVT+N++++G R+GD A + +M + T+S +I R+G A LF
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 61 DEAPHELKG----VVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYC 112
E E KG VVT+ +V G + G+ + + M R N ++ ++ +
Sbjct: 252 KEM--ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 113 KKGSVAEAETIFGRIPVRSLE----IWNTMIAGY-VQNGFGERALQAFEEMRAEGFEPDE 167
K+G + EA ++ + R + +NT++ GY +QN E A + M PD
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE-ANNMLDLMVRNKCSPDI 368
Query: 168 FTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEG 227
T S++ + +D G ++ I + L N S LV + + G + A +F+
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428
Query: 228 FTQR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGL 283
++ + ++ G NGK + LE F ++ + + + T++ GG
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488
Query: 284 LSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME---PNETVLGA 340
+ +A + + ++ + Y M+ L + G L EA L+++M + PN+
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 548
Query: 341 MLGACRTHSDMKMAEQVIK 359
++ A D+ + ++I+
Sbjct: 549 LIRAHLRDGDLTASAKLIE 567
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 155/346 (44%), Gaps = 27/346 (7%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLF 60
+VVT+N+++ G + G +L+ ++M + +T++ ++ F + G A L+
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 61 DE------APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNC----FVWSSMVSG 110
E +P+ ++T+ ++DGY + + A + +LM C ++S++ G
Sbjct: 322 KEMITRGISPN----IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Query: 111 YCKKGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
YC V + +F I R L ++ ++ G+ Q+G + A + F+EM + G PD
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437
Query: 167 EFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFE 226
T +L G L+ +I ++ ++ + + + +++ K G + +A +F
Sbjct: 438 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC 497
Query: 227 GF----TQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGG 282
+ N+ + MISG G E +ME P+ T+ T++ A G
Sbjct: 498 SLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDG 557
Query: 283 LLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRA-GRLKEAYDLIK 327
L+ + ++I +M++ ++D+L A RL Y L K
Sbjct: 558 DLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSK 603
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 173/361 (47%), Gaps = 25/361 (6%)
Query: 5 NVVTWNAMISGYMRNGDMESA---SLVFEEMPGKTGV-TWSQMIGGFARNGDTATARRLF 60
VVT+ +I+ Y + G + A S V +E K + T+S MI GF + D A A +F
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 542
Query: 61 DEAPHE--LKGVVTWTVMVDGYARKGEMEAA----REVFELMPERNCFVWSSMVSGYCKK 114
++ E V+ + ++ + G M+ A +E+ +L + ++ GY K
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 602
Query: 115 GSVAEAETIFGRIP----VRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
G + + +F + V ++ +N +I G V+ E+A++ +EM G +E T
Sbjct: 603 GDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTY 662
Query: 171 VSVLSACAQLGLLDAGKQIHHM--IEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF 228
++ A +G D GK + ++++ L V+ F L+ K G + +A V +
Sbjct: 663 TKIMQGYASVG--DTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM 720
Query: 229 TQRNIC----CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLL 284
+ RNI +N +I G+A G E + +M+ ++PD T+ + +SAC+ G +
Sbjct: 721 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDM 780
Query: 285 SEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEA---YDLIKRMPMEPNETVLGAM 341
+ A + I +MEA ++ IK Y ++ RA ++A Y+ +K M ++P++ V +
Sbjct: 781 NRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCL 840
Query: 342 L 342
L
Sbjct: 841 L 841
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 160/341 (46%), Gaps = 22/341 (6%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTG-----VTWSQMIGGFARNGDTATAR 57
+ N+ T++ MI+G+++ D +A VFE+M K G + ++ +I F G+ A
Sbjct: 516 KHNLKTYSMMINGFVKLKDWANAFAVFEDMV-KEGMKPDVILYNNIISAFCGMGNMDRAI 574
Query: 58 RLFDEAPHELKGVVTWTVM--VDGYARKGEMEAAREVFELMPERNCF----VWSSMVSGY 111
+ E T T M + GYA+ G+M + EVF++M C ++ +++G
Sbjct: 575 QTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGL 634
Query: 112 CKKGSVAEAETIFGRIPVRSL----EIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDE 167
+K + +A I + + + + ++ GY G +A + F ++ EG + D
Sbjct: 635 VEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDI 694
Query: 168 FTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEG 227
FT ++L AC + G + + + + + + N FV + L+D +A+ GD+ A + +
Sbjct: 695 FTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQ 754
Query: 228 FTQR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGL 283
+ +I + + IS + G + ME L ++P+ T+ T++ A L
Sbjct: 755 MKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASL 814
Query: 284 LSEALEVISKMEAYAIEMGIKHYGCMV-DLLGRAGRLKEAY 323
+AL +M+A I+ Y C++ LL RA + EAY
Sbjct: 815 PEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRAS-IAEAY 854
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 160/377 (42%), Gaps = 23/377 (6%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVT-----WSQMIGGFARNGDTATARRL 59
N + +I + + +ME A + EM + G+ + M+ G+ D +
Sbjct: 413 NASIYGKIIYAHCQTCNMERAEALVREME-EEGIDAPIAIYHTMMDGYTMVADEKKGLVV 471
Query: 60 FDEAPH--ELKGVVTWTVMVDGYARKGEMEAAREVFELMPE----RNCFVWSSMVSGYCK 113
F VVT+ +++ Y + G++ A EV +M E N +S M++G+ K
Sbjct: 472 FKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVK 531
Query: 114 KGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFT 169
A A +F + ++ ++N +I+ + G +RA+Q +EM+ P T
Sbjct: 532 LKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRT 591
Query: 170 VVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT 229
+ ++ A+ G + ++ M+ +GL++ + + A + + T
Sbjct: 592 FMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMT 651
Query: 230 ----QRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLS 285
N + ++ G+A G + E+F R++N + D T+ +L AC G +
Sbjct: 652 LAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQ 711
Query: 286 EALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME---PNETVLGAML 342
AL V +M A I Y ++D R G + EA DLI++M E P+ + +
Sbjct: 712 SALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFI 771
Query: 343 GACRTHSDMKMAEQVIK 359
AC DM A Q I+
Sbjct: 772 SACSKAGDMNRATQTIE 788
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 156/340 (45%), Gaps = 22/340 (6%)
Query: 12 MISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFA--RNGDTATA--RRLFDEA 63
M+ Y R GDM A FE M + T ++ +I +A R+ D A + R++ +E
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 64 PHELKGVVTWTVMVDGYARKGEMEAAREVFE----LMPERNCFVWSSMVSGYCKKGSVAE 119
+VT++V+V G+++ G EAA F+ + N ++ ++ +C+ ++
Sbjct: 375 IE--MSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMER 432
Query: 120 AETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLS 175
AE + + ++ I++TM+ GY ++ L F+ ++ GF P T +++
Sbjct: 433 AEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLIN 492
Query: 176 ACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQR---- 231
++G + ++ +++ + + N S +++ + K D NA VFE +
Sbjct: 493 LYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKP 552
Query: 232 NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVI 291
++ +N +IS F G ++ M+ L RP TF+ ++ A G + +LEV
Sbjct: 553 DVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVF 612
Query: 292 SKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPM 331
M + + +++ L ++++A +++ M +
Sbjct: 613 DMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTL 652
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 225 FEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLL 284
FE ++ + + M+ + G E F RM I P + + +++ A A G +
Sbjct: 301 FEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDM 360
Query: 285 SEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEA---YDLIKRMPMEPNETVLGAM 341
EAL + KM+ IEM + Y +V +AG + A +D KR+ N ++ G +
Sbjct: 361 DEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKI 420
Query: 342 LGA-CRTHSDMKMAEQVIK 359
+ A C+T +M+ AE +++
Sbjct: 421 IYAHCQT-CNMERAEALVR 438
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 157/317 (49%), Gaps = 22/317 (6%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMP----GKTGVTWSQMIGGFARNGD-TATAR 57
E NVV +N +I G +NG++ A + EM G VT++ ++ G +G + AR
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 58 RLFDEAPHELK-GVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYC 112
L D + VVT+T ++D + ++G ++ A+E+++ M + N ++S+++G C
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 113 KKGSVAEAETIFGRIPVR----SLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEF 168
G + +A+ F + + ++ +NT+I+G+ + + ++ F+ M EGF D F
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352
Query: 169 TVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKC--GDLVNARLVFE 226
T +++ Q+G L I + +R+T P +++ + ++ C G++ +A + F+
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVT--PDIITHCILLHGLCVNGEIESALVKFD 410
Query: 227 GFTQRN----ICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGG 282
+ I +N MI G K + E F R+ ++PDA T+ ++ G
Sbjct: 411 DMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNG 470
Query: 283 LLSEALEVISKMEAYAI 299
EA E+I +M+ I
Sbjct: 471 PRREADELIRRMKEEGI 487
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 150/329 (45%), Gaps = 22/329 (6%)
Query: 38 VTWSQMIGGFA---RNGDTATARRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFE 94
VT+ ++ GF R GD + L ++ +E VV + ++DG + GE+ A E+
Sbjct: 142 VTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE-PNVVVYNTLIDGLCKNGELNIALELLN 200
Query: 95 LMPER----NCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNG 146
M ++ + ++++++G C G ++A + + RS+ + +I +V+ G
Sbjct: 201 EMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQG 260
Query: 147 FGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLS 206
+ A + ++EM +P+ T S+++ G L K+ ++ K N +
Sbjct: 261 NLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYN 320
Query: 207 GLVDMYAKC-----GDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMEN 261
L+ + K G + R+ EGF +I +N +I G+ GK R L+ F M +
Sbjct: 321 TLISGFCKFRMVDEGMKLFQRMSCEGFNA-DIFTYNTLIHGYCQVGKLRVALDIFCWMVS 379
Query: 262 LNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKE 321
+ PD IT +L G + AL M +GI Y M+ L +A ++++
Sbjct: 380 RRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEK 439
Query: 322 AYDLIKRMPME---PNETVLGAM-LGACR 346
A++L R+P+E P+ M LG C+
Sbjct: 440 AWELFCRLPVEGVKPDARTYTIMILGLCK 468
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 4/150 (2%)
Query: 232 NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVI 291
N+ +N +I G NG+ LE ME + D +T+ T+L+ + G S+A ++
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 292 SKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM---PMEPNETVLGAMLGACRTH 348
M +I + + ++D+ + G L EA +L K M ++PN +++ H
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294
Query: 349 SDMKMAEQVIKLIGTN-SITRADSHNVLLS 377
+ A++ L+ + ++N L+S
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLIS 324
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 188/431 (43%), Gaps = 34/431 (7%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMP-GKTGVTWSQMIGGFARNGDTATARRLFDEA 63
+V+T+N MISGY + G++ +A V + M VT++ ++ +G A + D
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 64 PHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPERNC----FVWSSMVSGYCKKGSV 117
V+T+T++++ R + A ++ + M +R C ++ +V+G CK+G +
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 118 AEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSV 173
EA +P + N ++ G A + +M +GF P T +
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 174 LSACAQLGLLDAGKQI-----HHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF 228
++ + GLL I H + L+ NP L+ + K + A E
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP-----LLHGFCKEKKMDRAIEYLERM 405
Query: 229 TQR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLL 284
R +I +N M++ +GK + +E ++ + P IT+ TV+ A G
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 285 SEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEA---YDLIKRMPMEPNETVLGA- 340
+A++++ +M A ++ Y +V L R G++ EA + +RM + PN +
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 525
Query: 341 MLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIY---AASEKWEKAEKM--RGI 395
MLG C++ + + ++ +I S+ +L+ + A E E ++ +G+
Sbjct: 526 MLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Query: 396 MVDGESEKIAG 406
M +E++AG
Sbjct: 586 MKKSSAEQVAG 596
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 165/360 (45%), Gaps = 22/360 (6%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGV----TWSQMIGGFARNGDTATARRLF 60
+++ +I G+ R G A+ + E + G V T++ MI G+ + G+ A +
Sbjct: 136 DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVL 195
Query: 61 DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCF----VWSSMVSGYCKKGS 116
D VVT+ ++ G+++ A EV + M +R+C+ ++ ++ C+
Sbjct: 196 DRMSVS-PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSG 254
Query: 117 VAEAETIFGRIPVR----SLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVS 172
V A + + R + +N ++ G + G + A++ +M + G +P+ T
Sbjct: 255 VGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314
Query: 173 VL-SACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQR 231
+L S C+ +DA K + M+ K + + + L++ + G L A + E Q
Sbjct: 315 ILRSMCSTGRWMDAEKLLADML-RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 232 ----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEA 287
N +N ++ GF K +E+ RM + PD +T+ T+L+A G + +A
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 288 LEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM---PMEPNETVLGAMLGA 344
+E+++++ + + Y ++D L +AG+ +A L+ M ++P+ +++G
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGG 493
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 98/235 (41%), Gaps = 5/235 (2%)
Query: 104 WSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGF 163
+ ++ SGY ++ + +E N + V+ G E + E M G
Sbjct: 75 FETLSSGYSNSNGNGHYSSVNSSFALEDVE-SNNHLRQMVRTGELEEGFKFLENMVYHGN 133
Query: 164 EPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARL 223
PD +++ +LG +I ++E + + ++ Y K G++ NA
Sbjct: 134 VPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALS 193
Query: 224 VFEGFT-QRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGG 282
V + + ++ +N ++ +GK ++ +E RM + PD IT+ ++ A
Sbjct: 194 VLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDS 253
Query: 283 LLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMP---MEPN 334
+ A++++ +M + Y +V+ + + GRL EA + MP +PN
Sbjct: 254 GVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 196/437 (44%), Gaps = 38/437 (8%)
Query: 2 PERNVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATAR 57
P NVVT+ +I+G+ + G+M+ A +F+ M + + +S +I G+ + G
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 58 RLFDEAPHELKG----VVTWTVMVDGYARKGEMEAAREVFELM----PERNCFVWSSMVS 109
+LF +A H KG VV ++ +D Y + G++ A V++ M N ++ ++
Sbjct: 342 KLFSQALH--KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIK 399
Query: 110 GYCKKGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEP 165
G C+ G + EA ++G+I R +E ++++I G+ + G +E+M G+ P
Sbjct: 400 GLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP 459
Query: 166 DEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVF 225
D ++ ++ GL+ + + + + +N V + L+D + + A VF
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519
Query: 226 EGF----TQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHG 281
+ ++ + ++ + G+ E L F RM + + PDA+ + T++ A
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKH 579
Query: 282 GLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM---PMEPNETVL 338
+ L++ M+ I I ++ LL + R+++A + MEP+
Sbjct: 580 MKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTY 639
Query: 339 GAMLGACRTHSDMKMAEQVIKLI-----GTNSITRADSHNVLLSNIYAASEKWEKAEKMR 393
M+ + + AE++ +L+ G N++T +L ++ + + A +M
Sbjct: 640 NTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLT-----ILIHVLCKNNDMDGAIRMF 694
Query: 394 GIMVDGESEKIA---GC 407
IM + S+ A GC
Sbjct: 695 SIMAEKGSKPNAVTYGC 711
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 160/346 (46%), Gaps = 24/346 (6%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLF 60
NVVT+ +I G ++G + A ++ ++ + + VT+S +I GF + G+ + L+
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 61 DEA-----PHELKGVVTWTVMVDGYARKGEM-EAAREVFELMPER---NCFVWSSMVSGY 111
++ P + VV + V+VDG +++G M A R +++ + N V++S++ G+
Sbjct: 450 EDMIKMGYPPD---VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW 506
Query: 112 CKKGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDE 167
C+ EA +F + + ++ + T++ + G E AL F M G EPD
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDA 566
Query: 168 FTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVF-- 225
+++ A + G Q+ +++ +++ + V + ++ + KC + +A F
Sbjct: 567 LAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN 626
Query: 226 --EGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGL 283
EG + +I +N MI G+ + E F ++ P+ +T ++
Sbjct: 627 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 686
Query: 284 LSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM 329
+ A+ + S M + YGC++D ++ ++ ++ L + M
Sbjct: 687 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 732
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 132/316 (41%), Gaps = 16/316 (5%)
Query: 66 ELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAET--- 122
E GV ++D KGE+ A + L+ ER V + K SV + E
Sbjct: 213 EPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASR 272
Query: 123 ----IFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACA 178
+ P ++ + T+I G+ + G +RA F+ M G EPD +++
Sbjct: 273 LLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYF 332
Query: 179 QLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF----TQRNIC 234
+ G+L G ++ HK + ++ V S +D+Y K GDL A +V++ N+
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVV 392
Query: 235 CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM 294
+ +I G +G+ E +G++ + P +T+ +++ G L + M
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 295 EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM---PMEPNETVLGAML-GACRTHSD 350
+ YG +VD L + G + A +M + N V +++ G CR +
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR- 511
Query: 351 MKMAEQVIKLIGTNSI 366
A +V +L+G I
Sbjct: 512 FDEALKVFRLMGIYGI 527
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 14/180 (7%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMP----GKTGVTWSQMIGGFARNGDTATARR 58
E ++VT+N MI GY ++ A +FE + G VT + +I +N D A R
Sbjct: 633 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 692
Query: 59 LFDEAPHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYC 112
+F + VT+ ++D +++ ++E + ++FE M E+ + +S ++ G C
Sbjct: 693 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 752
Query: 113 KKGSVAEAETIFGR-IPVRSLE---IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEF 168
K+G V EA IF + I + L + +I GY + G A +E M G +PD+
Sbjct: 753 KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 189/412 (45%), Gaps = 41/412 (9%)
Query: 24 SASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPH-----ELKG----VVTWT 74
+A +VF E P + GV W+ + R EA H ELKG V++++
Sbjct: 229 TAIIVFREFP-EVGVCWNVASYNIVIHFVCQLGR--IKEAHHLLLLMELKGYTPDVISYS 285
Query: 75 VMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKGSVAEAETIF------ 124
+V+GY R GE++ ++ E+M + N +++ S++ C+ +AEAE F
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 125 GRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLG-LL 183
G +P ++ T+I G+ + G A + F EM + PD T +++S Q+G ++
Sbjct: 346 GILP--DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 184 DAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ----RNICCWNAM 239
+AGK H M K L + + L++ Y K G + +A V Q N+ + +
Sbjct: 404 EAGKLFHEMF-CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 240 ISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAI 299
I G G E M + ++P+ T+ ++++ G + EA++++ + EA +
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 300 EMGIKHYGCMVDLLGRAGRLKEAYDLIKRM---PMEPNETVLGAMLGACRTHSDMKMAEQ 356
Y ++D ++G + +A +++K M ++P ++ H ++ E+
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582
Query: 357 VIKLIGTNSIT-RADSHNVLL------SNIYAASEKWEKAEKMRGIMVDGES 401
++ + I A + N L+ +N+ AA+ + K RG+ DG++
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIY-KDMCSRGVGPDGKT 633
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 143/308 (46%), Gaps = 18/308 (5%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLF 60
+V+T+ A+ISG+ + GDM A +F EM K VT++++I G+ + G A R+
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 61 DEAPHE--LKGVVTWTVMVDGYARKGEMEAAREVFELM----PERNCFVWSSMVSGYCKK 114
+ VVT+T ++DG ++G++++A E+ M + N F ++S+V+G CK
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 115 GSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
G++ EA + G L + T++ Y ++G ++A + +EM +G +P T
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ 230
+++ G+L+ G+++ + + K + N + LV Y +L A +++
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 231 RNI----CCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSE 286
R + + ++ G +E F M+ T+ ++ E
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 287 ALEVISKM 294
A EV +M
Sbjct: 685 AREVFDQM 692
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 158/378 (41%), Gaps = 53/378 (14%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLF 60
+V++++ +++GY R G+++ + E M K + +IG R A A F
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 61 DEAPHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPERN----CFVWSSMVSGYCKK 114
E + L V +T ++DG+ ++G++ AA + F M R+ +++++SG+C+
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 115 GSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
G + EA +F + + LE + +I GY + G + A + M G P+ T
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLV--------------------- 209
+++ + G LD+ ++ H + L N F + +V
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 210 --------------DMYAKCGDLVNARLVFEGFT----QRNICCWNAMISGFAINGKCRE 251
D Y K G++ A+ + + Q I +N +++GF ++G +
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579
Query: 252 VLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVD 311
+ M I P+A TF +++ L A + M + + K Y +V
Sbjct: 580 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK 639
Query: 312 LLGRAGRLKEAYDLIKRM 329
+A +KEA+ L + M
Sbjct: 640 GHCKARNMKEAWFLFQEM 657
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 135/325 (41%), Gaps = 33/325 (10%)
Query: 52 DTATARRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER-------NCFVW 104
D + R+FD V + V+VD G + AR VFE M +C V+
Sbjct: 170 DWGSDPRVFD---------VFFQVLVDF----GLLREARRVFEKMLNYGLVLSVDSCNVY 216
Query: 105 SSMVSGYCKKGSVAEAETIFGRIP----VRSLEIWNTMIAGYVQNGFGERALQAFEEMRA 160
+ +S C K A A +F P ++ +N +I Q G + A M
Sbjct: 217 LTRLSKDCYK--TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMEL 274
Query: 161 EGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVN 220
+G+ PD + +V++ + G LD ++ +++ K L N ++ ++ + + L
Sbjct: 275 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE 334
Query: 221 ARLVFEGFTQRNI----CCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLS 276
A F ++ I + +I GF G R +FF M + +I PD +T+ ++S
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 277 ACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPM---EP 333
G + EA ++ +M +E + +++ +AG +K+A+ + M P
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 334 NETVLGAMLGACRTHSDMKMAEQVI 358
N ++ D+ A +++
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELL 479
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 88/177 (49%), Gaps = 14/177 (7%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLF 60
+ VT+ ++ Y ++G+M+ A + +EM GK T VT++ ++ GF +G +L
Sbjct: 525 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Query: 61 D--EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKK 114
+ A T+ +V Y + ++AA +++ M R + + ++V G+CK
Sbjct: 585 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 644
Query: 115 GSVAEAETIFGRIPVR----SLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDE 167
++ EA +F + + S+ ++ +I G+++ A + F++MR EG D+
Sbjct: 645 RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADK 701
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 189/412 (45%), Gaps = 41/412 (9%)
Query: 24 SASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAPH-----ELKG----VVTWT 74
+A +VF E P + GV W+ + R EA H ELKG V++++
Sbjct: 229 TAIIVFREFP-EVGVCWNVASYNIVIHFVCQLGR--IKEAHHLLLLMELKGYTPDVISYS 285
Query: 75 VMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKGSVAEAETIF------ 124
+V+GY R GE++ ++ E+M + N +++ S++ C+ +AEAE F
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 125 GRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLG-LL 183
G +P ++ T+I G+ + G A + F EM + PD T +++S Q+G ++
Sbjct: 346 GILP--DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 184 DAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ----RNICCWNAM 239
+AGK H M K L + + L++ Y K G + +A V Q N+ + +
Sbjct: 404 EAGKLFHEMF-CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 240 ISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAI 299
I G G E M + ++P+ T+ ++++ G + EA++++ + EA +
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 300 EMGIKHYGCMVDLLGRAGRLKEAYDLIKRM---PMEPNETVLGAMLGACRTHSDMKMAEQ 356
Y ++D ++G + +A +++K M ++P ++ H ++ E+
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582
Query: 357 VIKLIGTNSIT-RADSHNVLL------SNIYAASEKWEKAEKMRGIMVDGES 401
++ + I A + N L+ +N+ AA+ + K RG+ DG++
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIY-KDMCSRGVGPDGKT 633
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 143/308 (46%), Gaps = 18/308 (5%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLF 60
+V+T+ A+ISG+ + GDM A +F EM K VT++++I G+ + G A R+
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 61 DEAPHE--LKGVVTWTVMVDGYARKGEMEAAREVFELM----PERNCFVWSSMVSGYCKK 114
+ VVT+T ++DG ++G++++A E+ M + N F ++S+V+G CK
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 115 GSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
G++ EA + G L + T++ Y ++G ++A + +EM +G +P T
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ 230
+++ G+L+ G+++ + + K + N + LV Y +L A +++
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 231 RNI----CCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSE 286
R + + ++ G +E F M+ T+ ++ E
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 287 ALEVISKM 294
A EV +M
Sbjct: 685 AREVFDQM 692
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 158/378 (41%), Gaps = 53/378 (14%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLF 60
+V++++ +++GY R G+++ + E M K + +IG R A A F
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 61 DEAPHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPERN----CFVWSSMVSGYCKK 114
E + L V +T ++DG+ ++G++ AA + F M R+ +++++SG+C+
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 115 GSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
G + EA +F + + LE + +I GY + G + A + M G P+ T
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLV--------------------- 209
+++ + G LD+ ++ H + L N F + +V
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 210 --------------DMYAKCGDLVNARLVFEGFT----QRNICCWNAMISGFAINGKCRE 251
D Y K G++ A+ + + Q I +N +++GF ++G +
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579
Query: 252 VLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVD 311
+ M I P+A TF +++ L A + M + + K Y +V
Sbjct: 580 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK 639
Query: 312 LLGRAGRLKEAYDLIKRM 329
+A +KEA+ L + M
Sbjct: 640 GHCKARNMKEAWFLFQEM 657
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 135/325 (41%), Gaps = 33/325 (10%)
Query: 52 DTATARRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER-------NCFVW 104
D + R+FD V + V+VD G + AR VFE M +C V+
Sbjct: 170 DWGSDPRVFD---------VFFQVLVDF----GLLREARRVFEKMLNYGLVLSVDSCNVY 216
Query: 105 SSMVSGYCKKGSVAEAETIFGRIP----VRSLEIWNTMIAGYVQNGFGERALQAFEEMRA 160
+ +S C K A A +F P ++ +N +I Q G + A M
Sbjct: 217 LTRLSKDCYK--TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMEL 274
Query: 161 EGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVN 220
+G+ PD + +V++ + G LD ++ +++ K L N ++ ++ + + L
Sbjct: 275 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE 334
Query: 221 ARLVFEGFTQRNI----CCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLS 276
A F ++ I + +I GF G R +FF M + +I PD +T+ ++S
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 277 ACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPM---EP 333
G + EA ++ +M +E + +++ +AG +K+A+ + M P
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 334 NETVLGAMLGACRTHSDMKMAEQVI 358
N ++ D+ A +++
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELL 479
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 88/177 (49%), Gaps = 14/177 (7%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLF 60
+ VT+ ++ Y ++G+M+ A + +EM GK T VT++ ++ GF +G +L
Sbjct: 525 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Query: 61 D--EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKK 114
+ A T+ +V Y + ++AA +++ M R + + ++V G+CK
Sbjct: 585 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 644
Query: 115 GSVAEAETIFGRIPVR----SLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDE 167
++ EA +F + + S+ ++ +I G+++ A + F++MR EG D+
Sbjct: 645 RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADK 701
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 169/386 (43%), Gaps = 62/386 (16%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTG------------------------- 37
E +V+++N++I G+ RNGD+ SASLV E + G
Sbjct: 88 EPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDE 147
Query: 38 ----------------VTWSQMIGGFARNGDTATARRLFDEAPHEL--KGVVTWTVMVDG 79
VT+S I F ++G+ A + F + VVT+T ++DG
Sbjct: 148 VFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDG 207
Query: 80 YARKGEMEAAREVFELMP----ERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLE-- 133
Y + G++E A +++ M N +++++ G+CKKG + AE ++ R+ +E
Sbjct: 208 YCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPN 267
Query: 134 --IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHH 191
++ T+I G+ Q G + A++ +M +G D ++S G L +I
Sbjct: 268 SLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVE 327
Query: 192 MIEHKRLTVNPFVLSGLVDMYAKCGDLVNA-----RLVFEGFTQRNICCWNAMISGFAIN 246
+E L + + + +++ Y K G + A +L+ GF + ++ + MI G A N
Sbjct: 328 DMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGF-EPDVVALSTMIDGIAKN 386
Query: 247 GKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHY 306
G+ E + +F +E N D + + + + C G + E + SK+ + Y
Sbjct: 387 GQLHEAIVYFC-IEKAN---DVMYTVLIDALCKEGDFI-EVERLFSKISEAGLVPDKFMY 441
Query: 307 GCMVDLLGRAGRLKEAYDLIKRMPME 332
+ L + G L +A+ L RM E
Sbjct: 442 TSWIAGLCKQGNLVDAFKLKTRMVQE 467
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 135/290 (46%), Gaps = 17/290 (5%)
Query: 70 VVTWTVMVDGYARKGEMEAAREVFELMPERNCFV-------WSSMVSGYCKKGSVAEAET 122
V+++ ++DG+ R G++ +A V E + + F+ ++S+ +G+ K + E
Sbjct: 91 VISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFV 150
Query: 123 IFG---RIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQ 179
G + ++ ++T I + ++G + AL++F M+ + P+ T ++ +
Sbjct: 151 YMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCK 210
Query: 180 LGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVF----EGFTQRNICC 235
G L+ ++ + R+++N + L+D + K G++ A ++ E + N
Sbjct: 211 AGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLV 270
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKME 295
+ +I GF G ++F +M N +R D + ++S G L EA E++ ME
Sbjct: 271 YTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDME 330
Query: 296 AYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMP---MEPNETVLGAML 342
+ + + M++ ++GR+K A ++ ++ EP+ L M+
Sbjct: 331 KSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMI 380
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 132/307 (42%), Gaps = 52/307 (16%)
Query: 97 PERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERAL 152
P R+ F +S+VS CK G V AE I +P E +N++I G+ +NG A
Sbjct: 54 PHRSSF--NSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSAS 111
Query: 153 QAFEEMRA-EGF--EPDEFTVVSVLSACAQLGLLD------------------------- 184
E +RA GF +PD + S+ + +++ +LD
Sbjct: 112 LVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWID 171
Query: 185 ----------AGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ---- 230
A K H M + L+ N + L+D Y K GDL A +++ +
Sbjct: 172 TFCKSGELQLALKSFHSM-KRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMS 230
Query: 231 RNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEV 290
N+ + A+I GF G+ + E + RM + P+++ + T++ G A++
Sbjct: 231 LNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKF 290
Query: 291 ISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM---PMEPNETVLGAMLGACRT 347
++KM + + I YG ++ L G+LKEA ++++ M + P+ + M+ A
Sbjct: 291 LAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFK 350
Query: 348 HSDMKMA 354
MK A
Sbjct: 351 SGRMKAA 357
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 86/176 (48%), Gaps = 19/176 (10%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLF 60
++V + M++ Y ++G M++A ++ ++ + V S MI G A+NG A F
Sbjct: 337 DMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF 396
Query: 61 DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFE------LMPERNCFVWSSMVSGYCKK 114
E V +TV++D ++G+ +F L+P++ F+++S ++G CK+
Sbjct: 397 ---CIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDK--FMYTSWIAGLCKQ 451
Query: 115 GSVAEAETIFGRIPVRSLEI----WNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
G++ +A + R+ L + + T+I G G A Q F+EM G PD
Sbjct: 452 GNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPD 507
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 108/243 (44%), Gaps = 19/243 (7%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKT----GVTWSQMIGGFARNGDTATARRLF 60
++ + +ISG NG ++ A+ + E+M V ++ M+ + ++G A ++
Sbjct: 302 DITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMY 361
Query: 61 DEAPHEL------KGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKK 114
H+L VV + M+DG A+ G++ A V+ + + N +++ ++ CK+
Sbjct: 362 ----HKLIERGFEPDVVALSTMIDGIAKNGQLHEAI-VYFCIEKANDVMYTVLIDALCKE 416
Query: 115 GSVAEAETIFGRIP----VRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
G E E +F +I V ++ + IAG + G A + M EG D
Sbjct: 417 GDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAY 476
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ 230
+++ A GL+ +Q+ + + ++ + V L+ Y K G++ A + +
Sbjct: 477 TTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQR 536
Query: 231 RNI 233
R +
Sbjct: 537 RGL 539
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 106/234 (45%), Gaps = 15/234 (6%)
Query: 136 NTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEH 195
N I + + G +L+ + + G+ P + SV+S +LG + + I H +
Sbjct: 25 NKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSM-- 82
Query: 196 KRLTVNPFVLS--GLVDMYAKCGDLVNARLVFE------GFT-QRNICCWNAMISGFAIN 246
R P V+S L+D + + GD+ +A LV E GF + +I +N++ +GF+
Sbjct: 83 PRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKM 142
Query: 247 GKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHY 306
EV + G M P+ +T+ T + G L AL+ M+ A+ + +
Sbjct: 143 KMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTF 201
Query: 307 GCMVDLLGRAGRLKEAYDLIK---RMPMEPNETVLGAMLGACRTHSDMKMAEQV 357
C++D +AG L+ A L K R+ M N A++ +M+ AE++
Sbjct: 202 TCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEM 255
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 158/337 (46%), Gaps = 19/337 (5%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLF 60
+V T++++IS G AS + +M + VT++ +I FA+ G A +LF
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333
Query: 61 DEAPHEL--KGVVTWTVMVDGYARKGEMEAAREVFELMPERNCF----VWSSMVSGYCKK 114
DE +VT+ +++G+ ++ A+++F LM ++C ++++++G+CK
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 115 GSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
V + +F + R L + T+I G+ Q + A F++M ++G P+ T
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ 230
++L + G L+ + ++ ++ + + + + + K G + + +F +
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513
Query: 231 R----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSE 286
+ ++ +N MISGF G E F +M+ PD+ T+ T++ A G +
Sbjct: 514 KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 573
Query: 287 ALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAY 323
+ E+I +M + YG + D+L GRL + +
Sbjct: 574 SAELIKEMRSCRFAGDASTYGLVTDML-HDGRLDKGF 609
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 165/369 (44%), Gaps = 28/369 (7%)
Query: 4 RNVVTWNAMISGYMRNGDMESASLVFEEM----PGKTGVTWSQMIGGFARNGDTATARRL 59
N+ T+N MI+ R + A + +M G + VT + ++ GF + A L
Sbjct: 98 HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 157
Query: 60 FDEAPH--ELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNC----FVWSSMVSGYCK 113
D+ VT+T +V G + + A + E M + C + ++++G CK
Sbjct: 158 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 217
Query: 114 KGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFT 169
+G A + ++ +E I++T+I + + AL F EM +G PD FT
Sbjct: 218 RGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT 277
Query: 170 VVSVLSACAQLGL-LDAGKQIHHMIEHKRLTVNPFVLS--GLVDMYAKCGDLVNARLVFE 226
S++S G DA + + M+E K +NP V++ L+D +AK G L+ A +F+
Sbjct: 278 YSSLISCLCNYGRWSDASRLLSDMLERK---INPNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Query: 227 GFTQR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGG 282
QR NI +N++I+GF ++ + E + F M + + PD +T+ T+++
Sbjct: 335 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAK 394
Query: 283 LLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMP---MEPNETVLG 339
+ + +E+ M + Y ++ +A A + K+M + PN
Sbjct: 395 KVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYN 454
Query: 340 AML-GACRT 347
+L G C+
Sbjct: 455 TLLDGLCKN 463
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/413 (20%), Positives = 177/413 (42%), Gaps = 22/413 (5%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARR 58
+ + VT+ ++ G ++ A + E M K VT+ +I G + G+ A
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 59 LFD--EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYC 112
L + E VV ++ ++D + ++ A +F M + + F +SS++S C
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 113 KKGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEF 168
G ++A + + R + +N++I + + G A + F+EM +P+
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346
Query: 169 TVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF 228
T S+++ LD +QI ++ K + + L++ + K +V+ +F
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Query: 229 TQR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLL 284
++R N + +I GF C F +M + + P+ +T+ T+L G L
Sbjct: 407 SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 466
Query: 285 SEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPM---EPNETVLGAM 341
+A+ V ++ +E I Y M + + +AG++++ +DL + + +P+ M
Sbjct: 467 EKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTM 526
Query: 342 L-GACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMR 393
+ G C+ + IK+ + + ++N L+ +K AE ++
Sbjct: 527 ISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIK 579
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 168/369 (45%), Gaps = 26/369 (7%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTG-----VTWSQMIGGFARNGDTATARRL 59
++T NA+++G NG + A L+ + M +TG VT+ ++ ++G TA A L
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMV-ETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 60 F---DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYC 112
+E +L V +++++DG + G ++ A +F M + + ++++++ G+C
Sbjct: 235 LRKMEERKIKLDAV-KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 113 KKGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEF 168
G + + + R + ++ +I +V+ G A + +EM G PD
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 169 TVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF 228
T S++ + LD + ++ K N + L++ Y K + + +F
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 229 TQRNICC----WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLL 284
+ R + +N +I GF GK E F M + +RPD +++ +L G
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEP 473
Query: 285 SEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPM---EPNETVLGAM 341
+ALE+ K+E +E+ I Y ++ + A ++ +A+DL +P+ +P+ M
Sbjct: 474 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIM 533
Query: 342 LGA-CRTHS 349
+G C+ S
Sbjct: 534 IGGLCKKGS 542
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/382 (19%), Positives = 166/382 (43%), Gaps = 56/382 (14%)
Query: 1 MPERNV----VTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGD 52
M ER + V ++ +I G ++G +++A +F EM K + ++ +I GF G
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 53 -TATARRLFDEAPHELK-GVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSS 106
A+ L D ++ VV ++ ++D + ++G++ A E+ + M +R + ++S
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 107 MVSGYCKKGSVAEAETIFGRIPVR----SLEIWNTMIAGYVQNGFGERALQAFEEMRAEG 162
++ G+CK+ + +A + + + ++ +N +I GY + + L+ F +M G
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 163 FEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNAR 222
D T +++ +LG L+ K++ + +R V P ++S
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR--VRPDIVS---------------- 459
Query: 223 LVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGG 282
+ ++ G NG+ + LE F ++E + D + ++ +
Sbjct: 460 -------------YKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506
Query: 283 LLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME---PN----E 335
+ +A ++ + ++ +K Y M+ L + G L EA L ++M + PN
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566
Query: 336 TVLGAMLGACRTHSDMKMAEQV 357
++ A LG K+ E++
Sbjct: 567 ILIRAHLGEGDATKSAKLIEEI 588
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 94/191 (49%), Gaps = 26/191 (13%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTG----VTWSQMIGGFARNGDTATARRLF 60
+ VT+N +I G+ G +E A +F+EM + V++ ++ G NG+ A +F
Sbjct: 421 DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF 480
Query: 61 DE---APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCK 113
++ + EL + + +++ G +++ A ++F +P + + ++ M+ G CK
Sbjct: 481 EKIEKSKMELD-IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK 539
Query: 114 KGSVAEAETIFGRIPVRSLE---------IWNTMIAGYVQNGFGERALQAFEEMRAEGFE 164
KGS++EA+ +F R +E +N +I ++ G ++ + EE++ GF
Sbjct: 540 KGSLSEADLLF-----RKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFS 594
Query: 165 PDEFTVVSVLS 175
D TV V+
Sbjct: 595 VDASTVKMVVD 605
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 89/191 (46%), Gaps = 14/191 (7%)
Query: 151 ALQAFEEMRAEGFEPDEFTVVSVLSACAQ-----LGLLDAGKQIHHMIEHKRLT----VN 201
L ++M +G + +T+ +++ C + L GK I E +T +N
Sbjct: 91 VLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLIN 150
Query: 202 PFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMEN 261
L G V ++ +LV+ R+V G + + NA+++G +NGK + + RM
Sbjct: 151 GLCLEGRV---SEALELVD-RMVEMGH-KPTLITLNALVNGLCLNGKVSDAVLLIDRMVE 205
Query: 262 LNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKE 321
+P+ +T+ VL G + A+E++ KME I++ Y ++D L + G L
Sbjct: 206 TGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDN 265
Query: 322 AYDLIKRMPME 332
A++L M ++
Sbjct: 266 AFNLFNEMEIK 276
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 160/369 (43%), Gaps = 22/369 (5%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARR 58
+ N VT+N +I G + A + + M K VT+ ++ G + GDT A
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 59 LFD--EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYC 112
L + E GV+ + ++DG + M+ A +F+ M + N +SS++S C
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 113 KKGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEF 168
G ++A + + R + ++ +I +V+ G A + ++EM +P
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Query: 169 TVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF 228
T S+++ LD KQ+ + K + + L+ + K + VF
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Query: 229 TQR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLL 284
+QR N +N +I G G C E F M + + P+ +T+ T+L G L
Sbjct: 423 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482
Query: 285 SEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPM---EPNETVLGAM 341
+A+ V ++ +E I Y M++ + +AG++++ +DL + + +P+ M
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 542
Query: 342 L-GACRTHS 349
+ G CR S
Sbjct: 543 ISGFCRKGS 551
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 156/337 (46%), Gaps = 19/337 (5%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKT----GVTWSQMIGGFARNGDTATARRLF 60
NVVT++++IS G AS + +M + T+S +I F + G A +L+
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 349
Query: 61 DEAPHEL--KGVVTWTVMVDGYARKGEMEAAREVFELMPERNCF----VWSSMVSGYCKK 114
DE +VT++ +++G+ ++ A+++FE M ++CF +++++ G+CK
Sbjct: 350 DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKY 409
Query: 115 GSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
V E +F + R L +N +I G Q G + A + F+EM ++G P+ T
Sbjct: 410 KRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 469
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ 230
++L + G L+ + ++ ++ + + +++ K G + + +F +
Sbjct: 470 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL 529
Query: 231 R----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSE 286
+ ++ +N MISGF G E F M+ P++ + T++ A G
Sbjct: 530 KGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREA 589
Query: 287 ALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAY 323
+ E+I +M + G + ++L GRL +++
Sbjct: 590 SAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKSF 625
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 164/369 (44%), Gaps = 30/369 (8%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTG-----VTWSQMIGGFARNGDTATARRL 59
N T++ +I+ + R + A V +M K G VT S ++ G+ + + A L
Sbjct: 115 NHYTYSILINCFCRRSQLPLALAVLGKMM-KLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 60 FDE--APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNC----FVWSSMVSGYCK 113
D+ VT+ ++ G + A + + M + C + +V+G CK
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 114 KGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFT 169
+G A + ++ LE I+NT+I G + + AL F+EM +G P+ T
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 170 VVSVLSACAQLGL-LDAGKQIHHMIEHKRLTVNP--FVLSGLVDMYAKCGDLVNARLVFE 226
S++S G DA + + MIE K +NP F S L+D + K G LV A +++
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERK---INPDVFTFSALIDAFVKEGKLVEAEKLYD 350
Query: 227 GFTQR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGG 282
+R +I ++++I+GF ++ + E + F M + + PD +T+ T++
Sbjct: 351 EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 410
Query: 283 LLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME---PNETVLG 339
+ E +EV +M + Y ++ L +AG A ++ K M + PN
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470
Query: 340 AML-GACRT 347
+L G C+
Sbjct: 471 TLLDGLCKN 479
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 156/358 (43%), Gaps = 23/358 (6%)
Query: 7 VTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLFDE 62
+T+ ++I G + G ++ A V+E+M + ++ +I F +G +++ +
Sbjct: 448 ITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKD 507
Query: 63 APHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFV-----WSSMVSGYCKKG 115
++ + +D + GE E R +FE + R FV +S ++ G K G
Sbjct: 508 MINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARR-FVPDARSYSILIHGLIKAG 566
Query: 116 SVAEAETIFGRIP----VRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVV 171
E +F + V +N +I G+ + G +A Q EEM+ +GFEP T
Sbjct: 567 FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG 626
Query: 172 SVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQR 231
SV+ A++ LD + + KR+ +N + S L+D + K G + A L+ E Q+
Sbjct: 627 SVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686
Query: 232 ----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEA 287
N+ WN+++ + E L F M+ L P+ +T+ +++ ++A
Sbjct: 687 GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746
Query: 288 LEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME---PNETVLGAML 342
+M+ ++ Y M+ L +AG + EA L R P+ AM+
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMI 804
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 127/308 (41%), Gaps = 23/308 (7%)
Query: 40 WSQMIGGFARNGDTATARRLFDEAPHEL--KGVVTWTVMVDGYARKGEMEAAREVFE--- 94
++ +I GFA+ G +A L DE +V + V +D + + G+++ A + F
Sbjct: 206 FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIE 265
Query: 95 ---LMPERNCFVWSSMVSGYCKKGSVAEAETIF------GRIPVRSLEIWNTMIAGYVQN 145
L P+ ++SM+ CK + EA +F R+P +NTMI GY
Sbjct: 266 ANGLKPDE--VTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY--AYNTMIMGYGSA 321
Query: 146 GFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVL 205
G + A E RA+G P +L+ ++G +D ++ ++ K N
Sbjct: 322 GKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTY 380
Query: 206 SGLVDMYAKCGDLVNARLVFEGFTQ----RNICCWNAMISGFAINGKCREVLEFFGRMEN 261
+ L+DM + G L A + + + N+ N M+ + K E F M+
Sbjct: 381 NILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDY 440
Query: 262 LNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKE 321
PD ITF +++ G + +A +V KM Y ++ GR ++
Sbjct: 441 KVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKED 500
Query: 322 AYDLIKRM 329
+ + K M
Sbjct: 501 GHKIYKDM 508
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 142/323 (43%), Gaps = 18/323 (5%)
Query: 90 REVFELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQN 145
+++ EL E ++++++ G+ K+G V A ++ + SL+ ++N I + +
Sbjct: 192 QQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKV 251
Query: 146 GFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVL 205
G + A + F E+ A G +PDE T S++ + LD ++ +E R +
Sbjct: 252 GKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAY 311
Query: 206 SGLVDMYAKCGDLVNARLVFEGFTQR------NICCWNAMISGFAINGKCREVLEFFGRM 259
+ ++ Y G A + E QR ++ +N +++ GK E L+ F M
Sbjct: 312 NTMIMGYGSAGKFDEAYSLLE--RQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Query: 260 ENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRL 319
+ + P+ T+ ++ G L A E+ M+ + ++ MVD L ++ +L
Sbjct: 370 KK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
Query: 320 KEAYDLIKRMPME---PNETVLGAMLGACRTHSDMKMAEQVI-KLIGTNSITRADSHNVL 375
EA + + M + P+E +++ + A +V K++ ++ T + + L
Sbjct: 429 DEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSL 488
Query: 376 LSNIYAASEKWEKAEKMRGIMVD 398
+ N + K E K+ M++
Sbjct: 489 IKNFFNHGRK-EDGHKIYKDMIN 510
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/359 (19%), Positives = 148/359 (41%), Gaps = 26/359 (7%)
Query: 7 VTWNAMISGYMRNGDMESASLVFEEMPGKTGV----TWSQMIGGFARNGDTATARRLFDE 62
VT+ +MI + ++ A +FE + V ++ MI G+ G A L +
Sbjct: 274 VTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333
Query: 63 --APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER---NCFVWSSMVSGYCKKGSV 117
A + V+ + ++ + G+++ A +VFE M + N ++ ++ C+ G +
Sbjct: 334 QRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKL 393
Query: 118 AEAETI------FGRIP-VRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
A + G P VR++ N M+ ++ + A FEEM + PDE T
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTV---NIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITF 450
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ 230
S++ ++G +D +++ + N V + L+ + G + +++
Sbjct: 451 CSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMIN 510
Query: 231 RN----ICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSE 286
+N + N + G+ + F ++ PDA ++ ++ G +E
Sbjct: 511 QNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANE 570
Query: 287 ALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMP---MEPNETVLGAML 342
E+ M+ + + Y ++D + G++ +AY L++ M EP G+++
Sbjct: 571 TYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVI 629
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/371 (17%), Positives = 144/371 (38%), Gaps = 53/371 (14%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFA----RNGDTATARRLF 60
N + + ++I + +G E ++++M + Q++ + + G+ R +F
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMF 540
Query: 61 DE--APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFV----WSSMVSGYCKK 114
+E A + ++++++ G + G E+F M E+ C + ++ ++ G+CK
Sbjct: 541 EEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKC 600
Query: 115 GSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
G V +A + + + E + ++I G + + A FEE +++ E +
Sbjct: 601 GKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIY 660
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFE---- 226
S++ ++G +D I + K LT N + + L+D K ++ A + F+
Sbjct: 661 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKE 720
Query: 227 ----------GFTQRNIC-------------------------CWNAMISGFAINGKCRE 251
G +C + MISG A G E
Sbjct: 721 LKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAE 780
Query: 252 VLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVD 311
F R + PD+ + ++ ++G +A + + + + K ++D
Sbjct: 781 AGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLD 840
Query: 312 LLGRAGRLKEA 322
L + L++A
Sbjct: 841 TLHKNDCLEQA 851
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 16/189 (8%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARR 58
E NVV ++++I G+ + G ++ A L+ EE+ K TW+ ++ + + A
Sbjct: 654 ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALV 713
Query: 59 LFDEAPHELK---GVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGY 111
F ++ ELK VT+ ++++G + + A ++ M ++ + +++M+SG
Sbjct: 714 CF-QSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGL 772
Query: 112 CKKGSVAEAETIFGRIP----VRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDE 167
K G++AEA +F R V +N MI G A FEE R G
Sbjct: 773 AKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHN 832
Query: 168 FTVVSVLSA 176
T V +L
Sbjct: 833 KTCVVLLDT 841
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 106/265 (40%), Gaps = 35/265 (13%)
Query: 135 WNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIE 194
+ T+I + + L F++M+ G+EP +++ A+ G +D+
Sbjct: 171 YTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSA-------- 222
Query: 195 HKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLE 254
LS L +M + D +I +N I F GK +
Sbjct: 223 ----------LSLLDEMKSSSLDA-------------DIVLYNVCIDSFGKVGKVDMAWK 259
Query: 255 FFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLG 314
FF +E ++PD +T+ +++ L EA+E+ +E Y M+ G
Sbjct: 260 FFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYG 319
Query: 315 RAGRLKEAYDLIKRMPME---PNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADS 371
AG+ EAY L++R + P+ +L R + A +V + + ++ +
Sbjct: 320 SAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLST 379
Query: 372 HNVLLSNIYAASEKWEKAEKMRGIM 396
+N+L+ + A K + A ++R M
Sbjct: 380 YNILIDMLCRAG-KLDTAFELRDSM 403
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/411 (21%), Positives = 183/411 (44%), Gaps = 22/411 (5%)
Query: 5 NVVTWNAMISG-YMRNGDMESASLV---FEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
+ +T+ +I G ++ N E+ +LV + VT+ ++ G + GDT A L
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLL 248
Query: 61 D--EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKK 114
+ EA VV + ++D + ++ A +F+ M + N +SS++S C
Sbjct: 249 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 308
Query: 115 GSVAEAETIFGRIPVR----SLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
G ++A + + + +L +N +I +V+ G A + +++M +PD FT
Sbjct: 309 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTY 368
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ 230
S+++ LD KQ+ + K + + L+ + K + + +F +
Sbjct: 369 NSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSH 428
Query: 231 R----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSE 286
R + + +I G +G C + F +M + + PD +T+ +L + G L +
Sbjct: 429 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 488
Query: 287 ALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPM---EPNETVLGAMLG 343
ALEV M+ I++ I Y M++ + +AG++ + +DL + + +PN M+
Sbjct: 489 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 548
Query: 344 ACRTHSDMKMAEQVIKLIGTN-SITRADSHNVLLSNIYAASEKWEKAEKMR 393
+ ++ A ++K + + + + ++N L+ +K AE +R
Sbjct: 549 GLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIR 599
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 157/337 (46%), Gaps = 19/337 (5%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLF 60
NVVT++++IS G AS + +M K VT++ +I F + G A +L+
Sbjct: 294 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 353
Query: 61 DEAPHEL--KGVVTWTVMVDGYARKGEMEAAREVFELMPERNCF----VWSSMVSGYCKK 114
D+ + T+ +V+G+ ++ A+++FE M ++CF +++++ G+CK
Sbjct: 354 DDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 413
Query: 115 GSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
V + +F + R L + T+I G +G + A + F++M ++G PD T
Sbjct: 414 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 473
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ 230
+L G L+ ++ ++ + ++ ++ + +++ K G + + +F +
Sbjct: 474 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 533
Query: 231 R----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSE 286
+ N+ +N MISG +E +M+ P++ T+ T++ A G +
Sbjct: 534 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAA 593
Query: 287 ALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAY 323
+ E+I +M + G + ++L GRL +++
Sbjct: 594 SAELIREMRSCRFVGDASTIGLVANML-HDGRLDKSF 629
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 151/336 (44%), Gaps = 48/336 (14%)
Query: 5 NVVTWNAMISGYMRNG-DMESASLVFEEMPGKTGV-----TWSQMIGGFARNGDTATARR 58
N+VT+NA+I + G + + + F+EM + GV T++ ++ +R G AR
Sbjct: 302 NLVTYNAVIDACGKGGMEFKQVAKFFDEMQ-RNGVQPDRITFNSLLAVCSRGGLWEAARN 360
Query: 59 LFDEAPHEL--KGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYC 112
LFDE + + V ++ ++D + G+M+ A E+ MP + N +S+++ G+
Sbjct: 361 LFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFA 420
Query: 113 KKGSVAEAETIFGRIPVRSLEI----WNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEF 168
K G EA +FG + + + +NT+++ Y + G E AL EM + G + D
Sbjct: 421 KAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVV 480
Query: 169 TVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF 228
T ++L + G D K++ E KR V P
Sbjct: 481 TYNALLGGYGKQGKYDEVKKV--FTEMKREHVLP-------------------------- 512
Query: 229 TQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEAL 288
N+ ++ +I G++ G +E +E F ++ +R D + + ++ A GL+ A+
Sbjct: 513 ---NLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAV 569
Query: 289 EVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYD 324
+I +M I + Y ++D GR+ + + D
Sbjct: 570 SLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 165/359 (45%), Gaps = 53/359 (14%)
Query: 6 VVTWNAMISGYMRNGDMESASLVFEEMP----GKTGVTWSQMIGGFARNG-DTATARRLF 60
V ++A+IS Y R+G E A VF M VT++ +I + G + + F
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 61 DEAPHELKGV----VTWTVMVDGYARKGEMEAAREVFELMP----ERNCFVWSSMVSGYC 112
DE + GV +T+ ++ +R G EAAR +F+ M E++ F +++++ C
Sbjct: 328 DEM--QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC 385
Query: 113 KKGSVAEAETIFGRIPVR----SLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEF 168
K G + A I ++PV+ ++ ++T+I G+ + G + AL F EMR G D
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445
Query: 169 TVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF 228
+ ++LS ++G + I L +M A G
Sbjct: 446 SYNTLLSIYTKVGRSEEALDI------------------LREM-ASVG------------ 474
Query: 229 TQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEAL 288
++++ +NA++ G+ GK EV + F M+ ++ P+ +T+ T++ + GGL EA+
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAM 534
Query: 289 EVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME---PNETVLGAMLGA 344
E+ + ++ + + Y ++D L + G + A LI M E PN +++ A
Sbjct: 535 EIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 156/352 (44%), Gaps = 47/352 (13%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARR 58
E++V ++N ++ + G M+ A + +MP K V++S +I GFA+ G A
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALN 430
Query: 59 LFDEAPHELKGV----VTWTVMVDGYARKGEMEAAREVFELMP----ERNCFVWSSMVSG 110
LF E + G+ V++ ++ Y + G E A ++ M +++ +++++ G
Sbjct: 431 LFGEMRY--LGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGG 488
Query: 111 YCKKGSVAEAETIFGRIP----VRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
Y K+G E + +F + + +L ++T+I GY + G + A++ F E ++ G D
Sbjct: 489 YGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRAD 548
Query: 167 EFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDM------------YAK 214
+++ A + GL+ + + + + ++ N + ++D Y+
Sbjct: 549 VVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSN 608
Query: 215 CGDLVNARLVFEGFTQ----RNICCWNAMI--SGFAINGKCRE-------VLEFFGRMEN 261
G L + T+ R I + + S C E +LE F +M
Sbjct: 609 GGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQ 668
Query: 262 LNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLL 313
L I+P+ +TF +L+AC+ +A ++ ++ + K YG + LL
Sbjct: 669 LEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF----DNKVYGVVHGLL 716
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 156/337 (46%), Gaps = 19/337 (5%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLF 60
NVVT++++IS G AS + +M K VT++ +I F + G A +L
Sbjct: 219 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLH 278
Query: 61 DEAPHEL--KGVVTWTVMVDGYARKGEMEAAREVFELMPERNCF----VWSSMVSGYCKK 114
D+ + T+ +++G+ ++ A+++FE M ++CF +++++ G+CK
Sbjct: 279 DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 338
Query: 115 GSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
V + +F + R L + T+I G +G + A + F++M ++G PD T
Sbjct: 339 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 398
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ 230
+L G L+ ++ ++ + ++ ++ + +++ K G + + +F +
Sbjct: 399 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 458
Query: 231 R----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSE 286
+ N+ +N MISG +E +M+ PD+ T+ T++ A G +
Sbjct: 459 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 518
Query: 287 ALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAY 323
+ E+I +M + G + ++L GRL +++
Sbjct: 519 SAELIREMRSCRFVGDASTIGLVANML-HDGRLDKSF 554
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/412 (21%), Positives = 183/412 (44%), Gaps = 24/412 (5%)
Query: 5 NVVTWNAMISG-YMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRL 59
+ +T+ +I G ++ N E+ +LV + M + VT+ ++ G + GD A L
Sbjct: 114 DTITFTTLIHGLFLHNKASEAVALV-DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 172
Query: 60 FD--EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCK 113
+ EA VV + ++D + ++ A +F+ M + N +SS++S C
Sbjct: 173 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 232
Query: 114 KGSVAEAETIFGRIPVR----SLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFT 169
G ++A + + + +L +N +I +V+ G A + ++M +PD FT
Sbjct: 233 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFT 292
Query: 170 VVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT 229
S+++ LD KQ+ + K + + L+ + K + + +F +
Sbjct: 293 YNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMS 352
Query: 230 QR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLS 285
R + + +I G +G C + F +M + + PD +T+ +L + G L
Sbjct: 353 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 412
Query: 286 EALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPM---EPNETVLGAML 342
+ALEV M+ I++ I Y M++ + +AG++ + +DL + + +PN M+
Sbjct: 413 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 472
Query: 343 GACRTHSDMKMAEQVIKLIGTN-SITRADSHNVLLSNIYAASEKWEKAEKMR 393
+ ++ A ++K + + + + ++N L+ +K AE +R
Sbjct: 473 SGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIR 524
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 159/354 (44%), Gaps = 37/354 (10%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLF 60
N V +I+ Y + G + A + M + T++ ++ G +N A +F
Sbjct: 556 NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIF 615
Query: 61 DE------APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSG 110
E AP V ++ V+++G+++ G M+ A +F+ M E N +++ ++ G
Sbjct: 616 REMRGKGIAPD----VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671
Query: 111 YCKKGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
+C+ G + +A+ + + V+ L + T+I GY ++G A + F+EM+ +G PD
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD 731
Query: 167 EFTVVSVLSACAQLGLLDAGKQIHHMIEHKR---LTVNPFVLSGLVDMYAKCGDL----- 218
F +++ C +L D + I +K+ + PF + L++ K G
Sbjct: 732 SFVYTTLVDGCCRLN--DVERAITIFGTNKKGCASSTAPF--NALINWVFKFGKTELKTE 787
Query: 219 VNARLV---FEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVL 275
V RL+ F+ F + N +N MI G E F +M+N N+ P IT+ ++L
Sbjct: 788 VLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLL 847
Query: 276 SACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM 329
+ G +E V + A IE Y +++ + G +A L+ +M
Sbjct: 848 NGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 67/336 (19%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEM--PGKTG--VTWSQMIGGFARNGDTATARRLF 60
+V ++ +I+G+ + G+M+ AS +F+EM G T + ++ ++GGF R+G+ A+ L
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL 685
Query: 61 DEAPHELKGV----VTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYC 112
DE +KG+ VT+ ++DGY + G++ A +F+ M + + FV++++V G C
Sbjct: 686 DEM--SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743
Query: 113 KKGSVAEAETIFG---RIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFE----P 165
+ V A TIFG + S +N +I + G E + + F+ P
Sbjct: 744 RLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKP 803
Query: 166 DEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGD-------- 217
++ T ++ + G L+A K++ H +++ L + L++ Y K G
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863
Query: 218 -----------------LVNARLVFEGFTQR--------------------NICCWNAMI 240
++NA L EG T + +I A++
Sbjct: 864 DEAIAAGIEPDHIMYSVIINAFLK-EGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 241 SGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLS 276
SGFA G+ + M L PD+ T + +++
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 136/305 (44%), Gaps = 20/305 (6%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVT-----WSQMIGGFARNGDTATARRL 59
NVV + +I +++N A V +EM + G+ ++ +I G ++ AR
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMK-EQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509
Query: 60 FDE-APHELK-GVVTWTVMVDGYARKGEMEAAREVFELMPE----RNCFVWSSMVSGYCK 113
E + LK T+ + GY E +A + + M E N + + +++ YCK
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCK 569
Query: 114 KGSVAEAETIFGRIPVRSL----EIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFT 169
KG V EA + + + + + + + ++ G +N + A + F EMR +G PD F+
Sbjct: 570 KGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFS 629
Query: 170 VVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT 229
+++ ++LG + I + + LT N + + L+ + + G++ A+ + + +
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 230 QR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLS 285
+ N + +I G+ +G E F M+ + PD+ + T++ C +
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 749
Query: 286 EALEV 290
A+ +
Sbjct: 750 RAITI 754
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 166/389 (42%), Gaps = 32/389 (8%)
Query: 8 TWNAMISGYMRNGDMESASLVFEEMPGKTGVT-----WSQMIGGFARNGDTATARRLFDE 62
T++ +I G ++ + ++A + EM G+ + I ++ G A+ LFD
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMVSH-GINIKPYMYDCCICVMSKEGVMEKAKALFDG 372
Query: 63 --APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNC----FVWSSMVSGYCKKGS 116
A + + +++GY R+ + E+ M +RN + + ++V G C G
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432
Query: 117 VAEAETIFGRIPVR----SLEIWNTMIAGYVQNG-FGERALQAFEEMRAEGFEPDEFTVV 171
+ A I + ++ I+ T+I ++QN FG+ A++ +EM+ +G PD F
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGD-AMRVLKEMKEQGIAPDIFCYN 491
Query: 172 SVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA-RLVFE---- 226
S++ ++ +D + + L N F + Y + + +A + V E
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551
Query: 227 GFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSE 286
G + C +I+ + GK E + M + I DA T+ +++ + +
Sbjct: 552 GVLPNKVLC-TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD 610
Query: 287 ALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME---PNETVLGAMLG 343
A E+ +M I + YG +++ + G +++A + M E PN + +LG
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670
Query: 344 A-CRTHSDMK----MAEQVIKLIGTNSIT 367
CR+ K + E +K + N++T
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVT 699
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/417 (18%), Positives = 150/417 (35%), Gaps = 86/417 (20%)
Query: 7 VTWNAMISGYMRNGDMESASLVFEEMPG---------------------KTGVTWSQMIG 45
V + + GY+ G +E A VF G + + W G
Sbjct: 152 VLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKG 211
Query: 46 GFARNGDTATARRLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWS 105
RN +FD V T+ +++ + R G ++ ++V E+ +
Sbjct: 212 MVERN-------VVFD--------VKTYHMLIIAHCRAGNVQLGKDVL-FKTEKEFRTAT 255
Query: 106 SMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEP 165
V G K + E+ G +P++ ++ +I G + E A EM + G
Sbjct: 256 LNVDGALK---LKESMICKGLVPLKY--TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSL 310
Query: 166 DEFTVVSVLSACAQLGLLDAGKQ-IHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLV 224
D T ++ + DA K +H M+ H + + P++ + + +K G + A+ +
Sbjct: 311 DNHTYSLLIDGLLKGRNADAAKGLVHEMVSHG-INIKPYMYDCCICVMSKEGVMEKAKAL 369
Query: 225 FEGFTQRNIC----CWNAMISGFAINGKCREVLEFFGRMENLNI---------------- 264
F+G + + ++I G+ R+ E M+ NI
Sbjct: 370 FDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCS 429
Query: 265 -------------------RPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKH 305
RP+ + + T++ +A+ V+ +M+ I I
Sbjct: 430 SGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489
Query: 306 YGCMVDLLGRAGRLKEAYDLIKRMP---MEPNETVLGAMLGACRTHSDMKMAEQVIK 359
Y ++ L +A R+ EA + M ++PN GA + S+ A++ +K
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVK 546
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 161/347 (46%), Gaps = 22/347 (6%)
Query: 6 VVTWNAMISGYMRNGDMESASLVFEEMPGKTG-----VTWSQMIGGFARNGDTATARRLF 60
++T N +++G NG + A ++ + M +TG VT+ ++ ++G TA A L
Sbjct: 193 LITLNTLVNGLCLNGKVSDAVVLIDRMV-ETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 61 ---DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCK 113
+E +L V +++++DG + G ++ A +F M + + +++++ G+C
Sbjct: 252 RKMEERNIKLDAV-KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN 310
Query: 114 KGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFT 169
G + + + R + ++ +I +V+ G A Q +EM G P+ T
Sbjct: 311 AGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTIT 370
Query: 170 VVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT 229
S++ + L+ Q+ ++ K + + L++ Y K + + +F +
Sbjct: 371 YNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS 430
Query: 230 QR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLS 285
R N +N ++ GF +GK + F M + +RPD +++ +L G L
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELE 490
Query: 286 EALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME 332
+ALE+ K+E +E+ I Y ++ + A ++ +A+DL +P++
Sbjct: 491 KALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLK 537
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/380 (21%), Positives = 171/380 (45%), Gaps = 52/380 (13%)
Query: 1 MPERNV----VTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGD 52
M ERN+ V ++ +I G ++G +++A +F EM K +T++ +IGGF G
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 53 -TATARRLFDEAPHELK-GVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSS 106
A+ L D ++ VVT++V++D + ++G++ A ++ + M +R N ++S
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNS 373
Query: 107 MVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
++ G+CK+ + E A+Q + M ++G +PD
Sbjct: 374 LIDGFCKENRL-------------------------------EEAIQMVDLMISKGCDPD 402
Query: 167 EFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFE 226
T +++ + +D G ++ + + + N + LV + + G L A+ +F+
Sbjct: 403 IMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462
Query: 227 GFTQR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGG 282
R +I + ++ G NG+ + LE FG++E + D ++ ++ +
Sbjct: 463 EMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNAS 522
Query: 283 LLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME---PNETVLG 339
+ +A ++ + +++ + Y M+ L R L +A L ++M E P+E
Sbjct: 523 KVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYN 582
Query: 340 AMLGACRTHSDMKMAEQVIK 359
++ A D A ++I+
Sbjct: 583 ILIRAHLGDDDATTAAELIE 602
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/341 (19%), Positives = 152/341 (44%), Gaps = 27/341 (7%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLF 60
+++T+N +I G+ G + + + +M + VT+S +I F + G A +L
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356
Query: 61 DE------APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNC----FVWSSMVSG 110
E AP+ +T+ ++DG+ ++ +E A ++ +LM + C ++ +++G
Sbjct: 357 KEMMQRGIAPN----TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Query: 111 YCKKGSVAEAETIFGRIPVRSL----EIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
YCK + + +F + +R + +NT++ G+ Q+G E A + F+EM + PD
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Query: 167 EFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFE 226
+ +L G L+ +I IE ++ ++ + ++ + +A +F
Sbjct: 473 IVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFC 532
Query: 227 GFTQRNIC----CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGG 282
+ + +N MIS + F +M PD +T+ ++ A
Sbjct: 533 SLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDD 592
Query: 283 LLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAY 323
+ A E+I +M++ + ++++L +G L +++
Sbjct: 593 DATTAAELIEEMKSSGFPADVSTVKMVINMLS-SGELDKSF 632
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 160/356 (44%), Gaps = 31/356 (8%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLF 60
+++T+N +I GY + G+ E + V E M + +T++ ++ G + G A +
Sbjct: 248 SLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVL 307
Query: 61 DEAPHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKK 114
E + T++++ DGY+ + EAA V+E + N + S +++ CK+
Sbjct: 308 KEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKE 367
Query: 115 GSVAEAETIFGRIPVRSL----EIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
G + +AE I GR + L I+NTMI GY + G A E M +G +PD
Sbjct: 368 GKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAY 427
Query: 171 VSVLSACAQLG-LLDAGKQIHHMIEHKRLTVNPFVLS--------GLVDMYAKCGDLVNA 221
++ +LG + +A K+++ M K V+P V + G + KC D++
Sbjct: 428 NCLIRRFCELGEMENAEKEVNKM---KLKGVSPSVETYNILIGGYGRKYEFDKCFDILKE 484
Query: 222 RLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHG 281
+ + T N+ + +I+ K E ME+ + P + ++ C
Sbjct: 485 --MEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSK 542
Query: 282 GLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDL---IKRMPMEPN 334
G + +A +M IE+ + Y ++D L G+L EA DL I R ++P+
Sbjct: 543 GKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPD 598
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/380 (19%), Positives = 166/380 (43%), Gaps = 19/380 (5%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLF 60
+ T++ + GY N E+A V+E T S ++ + G A +
Sbjct: 318 DAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEIL 377
Query: 61 --DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKK 114
+ A + V + M+DGY RKG++ AR E M ++ + ++ ++ +C+
Sbjct: 378 GREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCEL 437
Query: 115 GSVAEAETIFGRIPVR----SLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
G + AE ++ ++ S+E +N +I GY + ++ +EM G P+ +
Sbjct: 438 GEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSY 497
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA----RLVFE 226
++++ + L + + +E + ++ + + L+D G + +A + + +
Sbjct: 498 GTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLK 557
Query: 227 GFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSE 286
+ N+ +N +I G ++ GK E + + ++PD T+ +++S G +
Sbjct: 558 KGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQR 617
Query: 287 ALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACR 346
+ + +M+ I+ +K Y ++ L + G ++ L M ++P+ V +L
Sbjct: 618 CIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEMSLKPDLLVYNGVLHCYA 676
Query: 347 THSDMKMAEQVIKLIGTNSI 366
H DM+ A + K + SI
Sbjct: 677 VHGDMEKAFNLQKQMIEKSI 696
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 136/303 (44%), Gaps = 15/303 (4%)
Query: 40 WSQMIGGFARNGDTATARRLFDE--APHELKGVVTWTVMVDGYARKGEMEAAREVFELMP 97
++ +I G + A +LFDE A L ++T+ ++DGY + G E + +V E M
Sbjct: 217 YNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMK 276
Query: 98 ----ERNCFVWSSMVSGYCKKGSVAEAETIFGRIP----VRSLEIWNTMIAGYVQNGFGE 149
E + +++++ G K G V +AE + + V ++ + GY N E
Sbjct: 277 ADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAE 336
Query: 150 RALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLV 209
AL +E G + + +T +L+A + G ++ ++I K L N + + ++
Sbjct: 337 AALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMI 396
Query: 210 DMYAKCGDLVNARLVFEGFTQRNI----CCWNAMISGFAINGKCREVLEFFGRMENLNIR 265
D Y + GDLV AR+ E ++ + +N +I F G+ + +M+ +
Sbjct: 397 DGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVS 456
Query: 266 PDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDL 325
P T+ ++ + +++ +ME + YG +++ L + +L EA +
Sbjct: 457 PSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA-QI 515
Query: 326 IKR 328
+KR
Sbjct: 516 VKR 518
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 155/353 (43%), Gaps = 31/353 (8%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLF 60
N V +N MI GY R GD+ A + E M + + ++ +I F G+ A +
Sbjct: 388 NEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEV 447
Query: 61 DEAPHELKGVV----TWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYC 112
++ +LKGV T+ +++ GY RK E + ++ + M + N + ++++ C
Sbjct: 448 NKM--KLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLC 505
Query: 113 KKGSVAEAETIFGRIPVR----SLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEF 168
K + EA+ + + R + I+N +I G G E A + +EM +G E +
Sbjct: 506 KGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLV 565
Query: 169 TVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF 228
T +++ + G L + + I K L + F + L+ Y G++ ++E
Sbjct: 566 TYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEM 625
Query: 229 TQRNI----CCWNAMISGFAINGKCREVLE-FFGRMENLNIRPDAITFLTVLSACAHGGL 283
+ I ++ +IS G E+ E FG M +++PD + + VL A G
Sbjct: 626 KRSGIKPTLKTYHLLISLCTKEGI--ELTERLFGEM---SLKPDLLVYNGVLHCYAVHGD 680
Query: 284 LSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM---PMEP 333
+ +A + +M +I + Y ++ + G+L E LI M MEP
Sbjct: 681 MEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEP 733
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 122/305 (40%), Gaps = 49/305 (16%)
Query: 102 FVWSSMVSGYCKKGSVAEAETIFGRIPVR----SLEIWNTMIAGYVQNGFGERALQAFEE 157
F+++ ++ G CK + +AE +F + R SL +NT+I GY + G E++ + E
Sbjct: 215 FIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRER 274
Query: 158 MRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAK--- 214
M+A+ EP T ++L + G+++ + + ++ + F S L D Y+
Sbjct: 275 MKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEK 334
Query: 215 ----------------------CGDLVNARLVFEGFTQR---------------NICCWN 237
C L+NA L EG ++ N +N
Sbjct: 335 AEAALGVYETAVDSGVKMNAYTCSILLNA-LCKEGKIEKAEEILGREMAKGLVPNEVIYN 393
Query: 238 AMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAY 297
MI G+ G ME ++PD + + ++ G + A + ++KM+
Sbjct: 394 TMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK 453
Query: 298 AIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME---PNETVLGAMLGACRTHSDMKMA 354
+ ++ Y ++ GR + +D++K M PN G ++ C +
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLIN-CLCKGSKLLE 512
Query: 355 EQVIK 359
Q++K
Sbjct: 513 AQIVK 517
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 102/239 (42%), Gaps = 43/239 (17%)
Query: 151 ALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVD 210
+ F + F P +F + A +L + G ++ + ++H R+ + F+ + L+D
Sbjct: 163 TINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLID 222
Query: 211 MYAKCGDLVNARLVFEGFTQR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRP 266
K + +A +F+ R ++ +N +I G+ G + + RM+ +I P
Sbjct: 223 GLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEP 282
Query: 267 DAITFLTVLSACAHGGLLSEALEVISKMEAY----------------------------- 297
ITF T+L G++ +A V+ +M+
Sbjct: 283 SLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVY 342
Query: 298 --AIEMGIK--HYGC--MVDLLGRAGRLKEAYDLIKR---MPMEPNETVLGAML-GACR 346
A++ G+K Y C +++ L + G++++A +++ R + PNE + M+ G CR
Sbjct: 343 ETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCR 401
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 155/341 (45%), Gaps = 27/341 (7%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKT----GVTWSQMIGGFARNGDTATARRLF 60
+VVT++++I G +G + + + EM G+ VT+S +I F + G A+ L+
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELY 338
Query: 61 DE------APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNC----FVWSSMVSG 110
+E AP +T+ ++DG+ ++ + A ++F+LM + C +S +++
Sbjct: 339 NEMITRGIAPD----TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Query: 111 YCKKGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
YCK V + +F I + L +NT++ G+ Q+G A + F+EM + G P
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 454
Query: 167 EFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFE 226
T +L G L+ +I ++ R+T+ + + ++ + +A +F
Sbjct: 455 VVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFC 514
Query: 227 GFTQR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGG 282
+ + ++ +N MI G G E F +M+ PD T+ ++ A G
Sbjct: 515 SLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGS 574
Query: 283 LLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAY 323
L ++E+I +M+ ++D+L RL +++
Sbjct: 575 GLISSVELIEEMKVCGFSADSSTIKMVIDMLSDR-RLDKSF 614
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 178/401 (44%), Gaps = 27/401 (6%)
Query: 1 MPER-NVVTWNAMISGYMRNGDMESASLVFEEM------PGKTGVTWSQMIGGFARNGDT 53
M +R ++VT + +I+G G + A ++ + M P + VT+ ++ ++G++
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDE--VTYGPVLNRLCKSGNS 226
Query: 54 ATARRLFD--EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSM 107
A A LF E + VV +++++D + G + A +F M + + +SS+
Sbjct: 227 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
Query: 108 VSGYCKKGSVAEAETIF----GRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGF 163
+ G C G + + GR + + ++ +I +V+ G A + + EM G
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Query: 164 EPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARL 223
PD T S++ + L Q+ ++ K + S L++ Y K + +
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 406
Query: 224 VFEGFTQR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA 279
+F + + N +N ++ GF +GK E F M + + P +T+ +L
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466
Query: 280 HGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMP---MEPNET 336
G L++ALE+ KM+ + +GI Y ++ + A ++ +A+ L + ++P+
Sbjct: 467 DNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 526
Query: 337 VLGAMLGACRTHSDMKMAEQVIKLIGTNSITRAD-SHNVLL 376
M+G + A+ + + + + T D ++N+L+
Sbjct: 527 TYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 108/245 (44%), Gaps = 18/245 (7%)
Query: 98 ERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQ 153
E + + + M++ YC+K + A ++ GR E ++T++ G+ G A+
Sbjct: 102 EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVA 161
Query: 154 AFEEMRAEGFEPDEFTVVSVLSA-CAQLGLLDAGKQIHHMIEH----KRLTVNPFVLSGL 208
+ M PD TV ++++ C + + +A I M+E+ +T P +
Sbjct: 162 LVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP-----V 216
Query: 209 VDMYAKCGDLVNARLVFEGFTQRNI----CCWNAMISGFAINGKCREVLEFFGRMENLNI 264
++ K G+ A +F +RNI ++ +I +G + L F ME I
Sbjct: 217 LNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGI 276
Query: 265 RPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYD 324
+ D +T+ +++ + G + +++ +M I + + ++D+ + G+L EA +
Sbjct: 277 KADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKE 336
Query: 325 LIKRM 329
L M
Sbjct: 337 LYNEM 341
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 194/428 (45%), Gaps = 33/428 (7%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKT----GVTWSQMIGGFARNGDTATARR 58
+ +V +NA+I+G+ + ++ A+ V + M K VT++ MIG G A +
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 59 LFDE--APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYC 112
+ ++ + + V+T+T++++ +G ++ A ++ + M R + F +++++ G C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 113 KKGSVAEAETIFGRIPVRSLEI---------WNTMIAGYVQNGFGERALQAFEEMRAEGF 163
K+G V A + VR+LE+ +N ++ + G E + +M +E
Sbjct: 275 KEGMVDRAFEM-----VRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 164 EPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARL 223
+P+ T +++ + G ++ + +++ K LT + + L+ + + G L A
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 224 VFEGFTQR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA 279
E +I +N +++ NGK + LE FG++ + P++ ++ T+ SA
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 280 HGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM---PMEPNET 336
G AL +I +M + I+ Y M+ L R G + EA++L+ M P+
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509
Query: 337 VLG-AMLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGI 395
+LG C+ H + ++G ++ VL+ I A + E E +
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Query: 396 M-VDGESE 402
+ +D SE
Sbjct: 570 VRIDAISE 577
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 5/173 (2%)
Query: 224 VFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGL 283
+ E F Q ++ +NA+I+GF + + RM + + PD +T+ ++ + G
Sbjct: 149 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208
Query: 284 LSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM---PMEPNETVLGA 340
L AL+V++++ + + + Y +++ G + EA L+ M ++P+
Sbjct: 209 LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT 268
Query: 341 ML-GACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKM 392
++ G C+ + E V L S+N+LL + KWE+ EK+
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQG-KWEEGEKL 320
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 170/378 (44%), Gaps = 25/378 (6%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMP----GKTGVTWSQMIGGFARNGDTATARRLF 60
++VTW +I + + G M+ A +EM V ++ +I GF G+ + LF
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 61 DEAPH--ELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKK 114
DE + +T+ ++ G+ + G+++ A E+FE M ER N + ++ ++ G C
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330
Query: 115 GSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
G EA + + + E +N +I ++G A++ E M+ PD T
Sbjct: 331 GKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITY 390
Query: 171 VSVLSA-CAQLGLLDAGKQIHHMIEHKRLTVNPFVLS--GLVDMYAKCGDLVNARLVFEG 227
+L CA+ L +A K ++ M++ T +P V+S L+ K L A +++
Sbjct: 391 NILLGGLCAKGDLDEASKLLYLMLKDSSYT-DPDVISYNALIHGLCKENRLHQALDIYDL 449
Query: 228 FTQR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGL 283
++ + N +++ G + +E + ++ + I ++ T+ ++ G+
Sbjct: 450 LVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGM 509
Query: 284 LSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME---PNETVLGA 340
L+ A ++ KM ++ + Y C++ L + G L +A+ L + M + P+
Sbjct: 510 LNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNI 569
Query: 341 MLGACRTHSDMKMAEQVI 358
M+ D+K AE ++
Sbjct: 570 MIDGSLKAGDIKSAESLL 587
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 145/314 (46%), Gaps = 24/314 (7%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARR 58
E N VT+N +I+ ++G + A + E M + +T++ ++GG GD A +
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASK 408
Query: 59 LF----DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSG 110
L ++ + V+++ ++ G ++ + A ++++L+ E+ + + +++
Sbjct: 409 LLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNS 468
Query: 111 YCKKGSVAEAETIFGRIP----VRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
K G V +A ++ +I VR+ + + MI G+ + G A +MR +P
Sbjct: 469 TLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPS 528
Query: 167 EFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSG--LVDMYAKCGDLVNARLV 224
F +LS+ + G LD ++ E +R P V+S ++D K GD+ +A +
Sbjct: 529 VFDYNCLLSSLCKEGSLDQAWRLFE--EMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESL 586
Query: 225 FEGFTQR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAH 280
G ++ ++ ++ +I+ F G E + FF +M + PDA +VL C
Sbjct: 587 LVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCIS 646
Query: 281 GGLLSEALEVISKM 294
G + E++ K+
Sbjct: 647 QGETDKLTELVKKL 660
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 144/324 (44%), Gaps = 18/324 (5%)
Query: 71 VTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKGSVAEAETIFGR 126
V+ + +++ Y + + A V LM +R N + + ++ G C+ +A ++
Sbjct: 108 VSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLRE 167
Query: 127 IPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGL 182
+ SL +NT+I G+ + E+AL+ EM+ G T ++ A + G
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227
Query: 183 LDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQR--NICC--WNA 238
+D ++ L + V + L+ + CG+L + +F+ +R + C +N
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287
Query: 239 MISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYA 298
+I GF G+ +E E F M +RP+ T+ ++ G EAL++++ M
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Query: 299 IEMGIKHYGCMVDLLGRAGRLKEA---YDLIKRMPMEPNETVLGAMLGACRTHSDMKMAE 355
E Y +++ L + G + +A +L+K+ P+ +LG D+ A
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407
Query: 356 QVIKL-IGTNSITRAD--SHNVLL 376
+++ L + +S T D S+N L+
Sbjct: 408 KLLYLMLKDSSYTDPDVISYNALI 431
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 163/352 (46%), Gaps = 30/352 (8%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGK---TGV-TWSQMIGGFARNGDTATARRLF 60
++VT+N +IS Y G ME A + MPGK GV T++ +I G ++G A+ +F
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 61 DE------APHELKGVVTWTVMVDGYARKGEMEAAREVF------ELMPERNCFVWSSMV 108
E +P T+ ++ +KG++ +VF +++P+ CF SSM+
Sbjct: 329 AEMLRSGLSPDS----TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCF--SSMM 382
Query: 109 SGYCKKGSVAEAETIFGRIPVRSL----EIWNTMIAGYVQNGFGERALQAFEEMRAEGFE 164
S + + G++ +A F + L I+ +I GY + G A+ EM +G
Sbjct: 383 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCA 442
Query: 165 PDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLV 224
D T ++L + +L ++ + + + L + + L+ L+D + K G+L NA +
Sbjct: 443 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL 502
Query: 225 FEGFTQR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAH 280
F+ ++ ++ +N ++ GF G E + M + I P I++ +++A
Sbjct: 503 FQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCS 562
Query: 281 GGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME 332
G L+EA V +M + I+ + M+ R+G + +++M E
Sbjct: 563 KGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE 614
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 169/382 (44%), Gaps = 33/382 (8%)
Query: 6 VVTWNAMISGYMRNGDMESASLVFEEM------PGKTGVTWSQMIGGFARNGDTATARRL 59
V T+N +I+G ++G E A VF EM P T T+ ++ + GD ++
Sbjct: 305 VYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST--TYRSLLMEACKKGDVVETEKV 362
Query: 60 FDE--APHELKGVVTWTVMVDGYARKGEMEAAREVFE------LMPERNCFVWSSMVSGY 111
F + + + +V ++ M+ + R G ++ A F L+P+ +++ ++ GY
Sbjct: 363 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN--VIYTILIQGY 420
Query: 112 CKKGSVAEAETIFGRIPVR----SLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDE 167
C+KG ++ A + + + + +NT++ G + A + F EM PD
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480
Query: 168 FTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEG 227
+T+ ++ +LG L ++ ++ KR+ ++ + L+D + K GD+ A+ ++
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540
Query: 228 FTQRNI----CCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGL 283
+ I ++ +++ G E + M + NI+P + +++ G
Sbjct: 541 MVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGN 600
Query: 284 LSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME-----PNETVL 338
S+ + KM + Y ++ R + +A+ L+K+M E P+
Sbjct: 601 ASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTY 660
Query: 339 GAML-GACRTHSDMKMAEQVIK 359
++L G CR + MK AE V++
Sbjct: 661 NSILHGFCR-QNQMKEAEVVLR 681
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/429 (21%), Positives = 182/429 (42%), Gaps = 53/429 (12%)
Query: 7 VTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGG----FARNGDTAT------- 55
++ +AMI +R+G + A M ++GV+ +++ F+ G +
Sbjct: 114 LSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIR 173
Query: 56 ----ARRLFDEAPHELKGVVT---WTVMVDG-------YARKGEMEAAREVFELMPER-- 99
AR+L HE ++ +TV +D R G +E A V++ +
Sbjct: 174 TYVQARKL--REAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGV 231
Query: 100 --NCFVWSSMVSGYCKKGSVAEAETIFGRIPVR----SLEIWNTMIAGYVQNGFGERALQ 153
N + + MV+ CK G + + T ++ + + +NT+I+ Y G E A +
Sbjct: 232 GINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFE 291
Query: 154 AFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYA 213
M +GF P +T +V++ + G + K++ + L+ + L+
Sbjct: 292 LMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEAC 351
Query: 214 KCGDLVNARLVFEGFTQRNI----CCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAI 269
K GD+V VF R++ C+++M+S F +G + L +F ++ + PD +
Sbjct: 352 KKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNV 411
Query: 270 TFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM 329
+ ++ G++S A+ + ++M M + Y ++ L + L EA L M
Sbjct: 412 IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 471
Query: 330 P---MEPNETVLGAML-GACRTHSDMKMAEQVIKLIGTNSITRAD--SHNVLLS------ 377
+ P+ L ++ G C+ +++ A ++ + + I R D ++N LL
Sbjct: 472 TERALFPDSYTLTILIDGHCKL-GNLQNAMELFQKMKEKRI-RLDVVTYNTLLDGFGKVG 529
Query: 378 NIYAASEKW 386
+I A E W
Sbjct: 530 DIDTAKEIW 538
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 94/216 (43%), Gaps = 55/216 (25%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLF 60
+VVT+N ++ G+ + GD+++A ++ +M K T +++S ++ G A A R++
Sbjct: 514 DVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVW 573
Query: 61 DEAPHE------------LKG-------------------------VVTWTVMVDGYARK 83
DE + +KG +++ ++ G+ R+
Sbjct: 574 DEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVRE 633
Query: 84 GEMEAAREVFELMPER------NCFVWSSMVSGYCKKGSVAEAETIFGRI------PVRS 131
M A + + M E + F ++S++ G+C++ + EAE + ++ P RS
Sbjct: 634 ENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRS 693
Query: 132 LEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDE 167
+ MI G+V A + +EM GF PD+
Sbjct: 694 --TYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 152/344 (44%), Gaps = 27/344 (7%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTG-----VTWSQMIGGFARNGDTATARRL 59
+ VT+N +ISG +G + A EM K G V+++ +I GF + G+ A+ L
Sbjct: 160 DTVTYNTVISGLCEHGLADEAYQFLSEMV-KMGILPDTVSYNTLIDGFCKVGNFVRAKAL 218
Query: 60 FDEAPHELKGVVTWTVMVDGYARKGEMEAA-REVFELMPERNCFVWSSMVSGYCKKGSVA 118
DE EL ++T T+++ Y +E A R++ + + +SS+++ CK G V
Sbjct: 219 VDEIS-EL-NLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVL 276
Query: 119 EAETIFGRIPVRSLE---------IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFT 169
E G + +R +E + T++ + AL + +M G D
Sbjct: 277 E-----GGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVV 331
Query: 170 VVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT 229
++ + G L ++ M+ N + LVD K GDL +A +
Sbjct: 332 YTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQML 391
Query: 230 QR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLS 285
++ N+ +++MI+G+ G E + +ME+ N+ P+ T+ TV+ G
Sbjct: 392 EKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEE 451
Query: 286 EALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM 329
A+E+ +M +E +V+ L R GR+KE L+K M
Sbjct: 452 MAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDM 495
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 165/377 (43%), Gaps = 56/377 (14%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKT----GVTWSQMIGGFARNGDTATARR 58
+ +VVT++++I+ + G + L+ EM + VT++ ++ + A
Sbjct: 256 DPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALA 315
Query: 59 LFDE-----APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERN----CFVWSSMVS 109
L+ + P +L V +TV++DG + G++ A + F+++ E N ++++V
Sbjct: 316 LYSQMVVRGIPVDL---VVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVD 372
Query: 110 GYCKKGSVAEAETIFGRIPVRSL----EIWNTMIAGYVQNGFGERALQAFEEMRAEGFEP 165
G CK G ++ AE I ++ +S+ +++MI GYV+ G E A+ +M + P
Sbjct: 373 GLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVP 432
Query: 166 DEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVF 225
+ FT +V+ GL AGK+ IE + RL+
Sbjct: 433 NGFTYGTVID-----GLFKAGKE-EMAIELSK----------------------EMRLI- 463
Query: 226 EGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLS 285
G + N +A+++ G+ +EV M + + D I + +++ GG
Sbjct: 464 -GVEENNYI-LDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEE 521
Query: 286 EALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKE--AYDLIKRMPMEPNETVLGAMLG 343
AL +M+ + + Y ++ + + G++ AY ++ +EP+ M+
Sbjct: 522 AALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMN 581
Query: 344 ACRTHSDMKMAEQVIKL 360
+ R D +E ++KL
Sbjct: 582 SQRKQGD---SEGILKL 595
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/377 (20%), Positives = 164/377 (43%), Gaps = 54/377 (14%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGV-----TWSQMIGGFARNGDTATARRL 59
+VV++N +ISG ++ G + A ++ M K G+ T++ M+ + GD+ +L
Sbjct: 538 DVVSYNVLISGMLKFGKV-GADWAYKGMREK-GIEPDIATFNIMMNSQRKQGDSEGILKL 595
Query: 60 FDEAPH--ELKGVVTWTVMVDGYARKGEMEAAREVF------ELMPERNCF-VWSSMVSG 110
+D+ +++ ++V G+ME A + E+ P + ++ S
Sbjct: 596 WDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSK 655
Query: 111 YCKKGSVAEA-ETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFT 169
+ + ++ + ET+ S +++NT+IA + G ++A +M A GF PD T
Sbjct: 656 HKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVT 715
Query: 170 VVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT 229
S++ + + H R ++ + ++ E
Sbjct: 716 FNSLMHG-------------YFVGSHVRKALSTY------------------SVMMEAGI 744
Query: 230 QRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALE 289
N+ +N +I G + G +EV ++ M++ +RPD T+ ++S A G + ++
Sbjct: 745 SPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMT 804
Query: 290 VISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM---PMEPNETVLGAML-GAC 345
+ +M A + Y ++ G++ +A +L+K M + PN + M+ G C
Sbjct: 805 IYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLC 864
Query: 346 R--THSDMKMAEQVIKL 360
+ TH D++ ++ + L
Sbjct: 865 KLCTHPDVEWNKKAMYL 881
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/306 (19%), Positives = 128/306 (41%), Gaps = 34/306 (11%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQM-----IGGFARNGDTATAR 57
E ++ T+N M++ + GD E ++++M G+ S M +G NG A
Sbjct: 570 EPDIATFNIMMNSQRKQGDSEGILKLWDKMKS-CGIKPSLMSCNIVVGMLCENGKMEEAI 628
Query: 58 RLFDEA------PHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCF----VWSSM 107
+ ++ P+ + T+ + +D ++ +A + E + V++++
Sbjct: 629 HILNQMMLMEIHPN----LTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTL 684
Query: 108 VSGYCKKGSVAEAETIFGRIPVRSL----EIWNTMIAGYVQNGFGERALQAFEEMRAEGF 163
++ CK G +A + G + R +N+++ GY +AL + M G
Sbjct: 685 IATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGI 744
Query: 164 EPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDL----- 218
P+ T +++ + GL+ + ++ + + + F + L+ AK G++
Sbjct: 745 SPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMT 804
Query: 219 VNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSA- 277
+ ++ +G + +N +IS FA GK + E M + P+ T+ T++S
Sbjct: 805 IYCEMIADGLVPKT-STYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGL 863
Query: 278 ---CAH 280
C H
Sbjct: 864 CKLCTH 869
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 165/346 (47%), Gaps = 29/346 (8%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGV-----TWSQMIGGFARNGDTAT 55
+P+ +V +N +I G++ +G ++ A V +M G+ T++ +I G+ + G
Sbjct: 348 IPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGL 407
Query: 56 ARRLFDEAPHELKG------VVTWTVMVDGYARKGEMEAAREVFELMP----ERNCFVWS 105
A E H+++ V ++T++VDG+ + G+++ A V M + N ++
Sbjct: 408 AL----EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFN 463
Query: 106 SMVSGYCKKGSVAEAETIFGRIPVR----SLEIWNTMIAGYVQNGFGERALQAFEEMRAE 161
++S +CK+ + EA IF +P + + +N++I+G + + AL +M +E
Sbjct: 464 CLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 523
Query: 162 GFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA 221
G + T ++++A + G + +++ + + + ++ + L+ + G++ A
Sbjct: 524 GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKA 583
Query: 222 RLVFE-----GFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLS 276
R +FE G NI C N +I+G +G E +EF M PD +TF ++++
Sbjct: 584 RSLFEKMLRDGHAPSNISC-NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLIN 642
Query: 277 ACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEA 322
G + + L + K++A I + ++ L + G + +A
Sbjct: 643 GLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/346 (19%), Positives = 160/346 (46%), Gaps = 27/346 (7%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGV----TWSQMIGGFARNGDTATARRLF 60
N V + +I + + A + EEM V T++ +I G + A ++
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMV 310
Query: 61 DE------APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKK 114
+ AP + +T+ +++G + G ++AA+++F +P+ ++++++ G+
Sbjct: 311 NRMLIRGFAPDD----ITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTH 366
Query: 115 GSVAEAETI-------FGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDE 167
G + +A+ + +G +P + +N++I GY + G AL+ +MR +G +P+
Sbjct: 367 GRLDDAKAVLSDMVTSYGIVP--DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV 424
Query: 168 FTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEG 227
++ ++ +LG +D + + + L N + L+ + K + A +F
Sbjct: 425 YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 484
Query: 228 FTQR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGL 283
++ ++ +N++ISG + + L M + + + +T+ T+++A G
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 544
Query: 284 LSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM 329
+ EA +++++M + Y ++ L RAG + +A L ++M
Sbjct: 545 IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/346 (19%), Positives = 150/346 (43%), Gaps = 24/346 (6%)
Query: 70 VVTWTVMVDGYARKGEMEAAREVFELMPERNCF----VWSSMVSGYCKKGSVAEA----E 121
+ T+ V++ + E+++A + M + C ++ +++ K V EA E
Sbjct: 217 LFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLE 276
Query: 122 TIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLG 181
+F V E +N +I G + A + M GF PD+ T +++ ++G
Sbjct: 277 EMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIG 336
Query: 182 LLDAGKQIHHMIEHKRLTVNPFVLSGLV------DMYAKCGDLVNARLVFEGFTQRNICC 235
+DA K + + I + + ++ G V D A D+V + + ++C
Sbjct: 337 RVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP-----DVCT 391
Query: 236 WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKME 295
+N++I G+ G LE M N +P+ ++ ++ G + EA V+++M
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
Query: 296 AYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMP---MEPNETVLGAMLGACRTHSDMK 352
A ++ + C++ + R+ EA ++ + MP +P+ +++ ++K
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 353 MAEQVIK-LIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMV 397
A +++ +I + ++N L+ N + + ++A K+ MV
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLI-NAFLRRGEIKEARKLVNEMV 556
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 111/239 (46%), Gaps = 20/239 (8%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLF 60
N V +N +IS + + + A +F EMP K T++ +I G + A L
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517
Query: 61 DEAPHE--LKGVVTWTVMVDGYARKGEMEAARE-----VFELMPERNCFVWSSMVSGYCK 113
+ E + VT+ +++ + R+GE++ AR+ VF+ P ++S++ G C+
Sbjct: 518 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE-ITYNSLIKGLCR 576
Query: 114 KGSVAEAETIF------GRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDE 167
G V +A ++F G P S N +I G ++G E A++ +EM G PD
Sbjct: 577 AGEVDKARSLFEKMLRDGHAP--SNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDI 634
Query: 168 FTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFE 226
T S+++ + G ++ G + ++ + + + + L+ K G + +A L+ +
Sbjct: 635 VTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLD 693
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 91/183 (49%), Gaps = 22/183 (12%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTG----VTWSQMIGGFARNGDTATARRLF 60
N VT+N +I+ ++R G+++ A + EM + +T++ +I G R G+ AR LF
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 61 DE------APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSG 110
++ AP ++ ++++G R G +E A E + M R + ++S+++G
Sbjct: 588 EKMLRDGHAPSN----ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLING 643
Query: 111 YCKKGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
C+ G + + T+F ++ + +NT+++ + GF A +E +GF P+
Sbjct: 644 LCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN 703
Query: 167 EFT 169
T
Sbjct: 704 HRT 706
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 170/376 (45%), Gaps = 21/376 (5%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEM----PGKTGVTWSQMIGGFARNGDTATARRLF 60
NVV ++I+G+ +N D+ SA ++F++M P VT+S +I F +NG+ A +
Sbjct: 338 NVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFY 397
Query: 61 D--EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER---NCFVWSSMVSGYCKKG 115
E V ++ G+ + + E A ++F+ E N FV ++++S CK+G
Sbjct: 398 KKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQG 457
Query: 116 SVAEAETIFGRIPVR----SLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVV 171
EA + ++ R ++ +N ++ G+ + + A F + +G +P+ +T
Sbjct: 458 KTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYS 517
Query: 172 SVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQR 231
++ C + ++ + + + VN V +++ K G AR + +
Sbjct: 518 ILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEE 577
Query: 232 NICC-----WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSE 286
C +N++I GF G+ + + M I P+ IT+ ++++ + +
Sbjct: 578 KRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQ 637
Query: 287 ALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME---PNETVLGAMLG 343
ALE+ +M+ +++ I YG ++D + ++ A L + E P++ + +++
Sbjct: 638 ALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLIS 697
Query: 344 ACRTHSDMKMAEQVIK 359
R +M A + K
Sbjct: 698 GFRNLGNMVAALDLYK 713
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 157/347 (45%), Gaps = 20/347 (5%)
Query: 2 PERNVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWS-----QMIGGFARNGDTATA 56
P N VT++ +I + +NG+ME A +++M G+T S +I G+ + A
Sbjct: 370 PSPNSVTFSVLIEWFRKNGEMEKALEFYKKME-VLGLTPSVFHVHTIIQGWLKGQKHEEA 428
Query: 57 RRLFDEAPHE-LKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGY 111
+LFDE+ L V ++ ++G+ + A E+ M R N +++++ G+
Sbjct: 429 LKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGH 488
Query: 112 CKKGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDE 167
C++ ++ A +F I + L+ ++ +I G +N + AL+ M + E +
Sbjct: 489 CRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNG 548
Query: 168 FTVVSVLSACAQLGLLDAGKQ-IHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFE 226
++++ ++G ++ + +MIE KRL V+ + ++D + K G++ +A +E
Sbjct: 549 VVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYE 608
Query: 227 GF----TQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGG 282
N+ + ++++G N + + LE M+N ++ D + ++
Sbjct: 609 EMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRS 668
Query: 283 LLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM 329
+ A + S++ + Y ++ G + A DL K+M
Sbjct: 669 NMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKM 715
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 134/326 (41%), Gaps = 54/326 (16%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKT----GVTWSQMIGGFARNGDTATARRLF 60
N T++ +I G RN D ++A V M GV + +I G + G T+ AR L
Sbjct: 512 NNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELL 571
Query: 61 DEAPHELKGVVT---WTVMVDGYARKGEMEAAREVFELM----PERNCFVWSSM------ 107
E + V+ + ++DG+ ++GEM++A +E M N ++S+
Sbjct: 572 ANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCK 631
Query: 108 -----------------------------VSGYCKKGSVAEAETIFGRIPVRSLE----I 134
+ G+CK+ ++ A +F + L I
Sbjct: 632 NNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPI 691
Query: 135 WNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIE 194
+N++I+G+ G AL +++M +G D T +++ + G L +++ ++
Sbjct: 692 YNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQ 751
Query: 195 HKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNIC----CWNAMISGFAINGKCR 250
L + + + +V+ +K G V +FE + N+ +NA+I+G G
Sbjct: 752 AVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLD 811
Query: 251 EVLEFFGRMENLNIRPDAITFLTVLS 276
E M + I PD TF ++S
Sbjct: 812 EAFRLHDEMLDKGILPDGATFDILVS 837
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 137/344 (39%), Gaps = 60/344 (17%)
Query: 73 WTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMV----SGYCKKGSVAEAETIFGRIP 128
+ +++ Y++ + + A ++ M E + + V S ++ S+ EA+ ++ R+
Sbjct: 166 FNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMV 225
Query: 129 VRSLEIWNTMIAGYVQNGFGER----ALQAFEEMRAEGFEPDEFTV-VSVLSACAQLGLL 183
++ N ++ E AL+ G EPD ++V + C L L
Sbjct: 226 AIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLA 285
Query: 184 DAGKQIHHMIEHKR-----------------------------------LTVNPFVLSGL 208
A + M E K +++N + L
Sbjct: 286 MANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSL 345
Query: 209 VDMYAKCGDLVNARLVFEGFTQR----NICCWNAMISGFAINGKCREVLEFFGRMENLNI 264
+ + K DLV+A ++F+ + N ++ +I F NG+ + LEF+ +ME L +
Sbjct: 346 ITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGL 405
Query: 265 RPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKH-YGC--MVDLLGRAGRLKE 321
P T++ G EAL++ + + E G+ + + C ++ L + G+ E
Sbjct: 406 TPSVFHVHTIIQGWLKGQKHEEALKLFDE----SFETGLANVFVCNTILSWLCKQGKTDE 461
Query: 322 AYDLIKRMP---MEPNETVL-GAMLGACRTHSDMKMAEQVIKLI 361
A +L+ +M + PN MLG CR +M +A V I
Sbjct: 462 ATELLSKMESRGIGPNVVSYNNVMLGHCR-QKNMDLARIVFSNI 504
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 170/359 (47%), Gaps = 23/359 (6%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGV-----TWSQMIGGFARNGDTATARRL 59
NVV + +I G + G++E A +F EM GK G+ T++ +I G +NG +
Sbjct: 197 NVVIYTTLIDGCCKKGEIEKAKDLFFEM-GKLGLVANERTYTVLINGLFKNGVKKQGFEM 255
Query: 60 FDEAPHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCK 113
+++ + + T+ +++ + G + A +VF+ M ER N +++++ G C+
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR 315
Query: 114 KGSVAEAETIFGRIPVR----SLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFT 169
+ + EA + ++ +L +NT+I G+ G +AL ++++ G P T
Sbjct: 316 EMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVT 375
Query: 170 VVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDL---VNARLVFE 226
++S + G ++ +E + + + + L+D +A+ ++ + RL E
Sbjct: 376 YNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSME 435
Query: 227 GF-TQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLS 285
++ ++ +I GF I G+ E F M N P+ + + T++ G
Sbjct: 436 ELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSY 495
Query: 286 EALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM---PMEPNETVLGAM 341
AL+++ +ME + + Y M+++L + + KEA L+++M ++P+ ++L +
Sbjct: 496 RALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 185/427 (43%), Gaps = 42/427 (9%)
Query: 7 VTWNAMISGYMRNGDMESASLVFEEMPGKTG-----VTWSQMIGGFARNGDTATARRLFD 61
+T+ MI G +NG ++ A ++ EM K G VT+S +I GF + G TA+ +
Sbjct: 444 ITYTGMIDGLCKNGFLDEAVVLLNEM-SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVC 502
Query: 62 E------APHELKGVVTWTVMVDGYARKGEMEAAREVFELM----PERNCFVWSSMVSGY 111
+P+ G++ ++ ++ R G ++ A ++E M R+ F ++ +V+
Sbjct: 503 RIYRVGLSPN---GII-YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSL 558
Query: 112 CKKGSVAEAE------TIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEP 165
CK G VAEAE T G +P + ++ +I GY +G G +A F+EM G P
Sbjct: 559 CKAGKVAEAEEFMRCMTSDGILP--NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHP 616
Query: 166 DEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVF 225
FT S+L + G L ++ + V+ + + L+ K G+L A +F
Sbjct: 617 TFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLF 676
Query: 226 EGFTQRNIC----CWNAMISGFAINGKCREVLEFFGRMENL-NIRPDAITFLTVLSACAH 280
QR+I + ++ISG GK + F E N+ P+ + + +
Sbjct: 677 GEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFK 736
Query: 281 GGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME---PNETV 337
G + +M+ I M+D R G++++ DL+ M + PN T
Sbjct: 737 AGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTT 796
Query: 338 LGAMLGACRTHSDMKMAEQVIKLIGTNSI--TRADSHNVLL----SNIYAASEKWEKAEK 391
+L D+ + + + I N I + H+++L SN+ K KA
Sbjct: 797 YNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFI 856
Query: 392 MRGIMVD 398
RG+ VD
Sbjct: 857 CRGVEVD 863
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 155/354 (43%), Gaps = 28/354 (7%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARR 58
+ +V T+N +I R+ + L+ +M + VT++ +I GF+ G A +
Sbjct: 300 DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQ 359
Query: 59 LFDE------APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNC----FVWSSMV 108
L +E +P+ VT+ ++DG+ +G + A ++F +M + + ++
Sbjct: 360 LLNEMLSFGLSPNH----VTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLL 415
Query: 109 SGYCKKGSVAEAETIFGRIPVRSLEI----WNTMIAGYVQNGFGERALQAFEEMRAEGFE 164
G CK A + R+ + + + MI G +NGF + A+ EM +G +
Sbjct: 416 DGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGID 475
Query: 165 PDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA--- 221
PD T ++++ ++G K+I I L+ N + S L+ + G L A
Sbjct: 476 PDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 535
Query: 222 --RLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA 279
++ EG T R+ +N +++ GK E EF M + I P+ ++F +++
Sbjct: 536 YEAMILEGHT-RDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYG 594
Query: 280 HGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEP 333
+ G +A V +M YG ++ L + G L+EA +K + P
Sbjct: 595 NSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 648
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 141/337 (41%), Gaps = 41/337 (12%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTG----VTWSQMIGGFARNGDTATARRLF 60
++VT NAMI GY R G +E + + EM + G T++ ++ G+++ D +T+ L+
Sbjct: 758 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 817
Query: 61 DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEA 120
+++++G ++P++ S+V G C+ +
Sbjct: 818 R------------SIILNG---------------ILPDK--LTCHSLVLGICESNMLEIG 848
Query: 121 ETIFGRIPVRSLEI----WNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
I R +E+ +N +I+ NG A + M + G D+ T +++S
Sbjct: 849 LKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSV 908
Query: 177 CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCW 236
+ + + H + + ++ GL++ + GD+ A +V E IC
Sbjct: 909 LNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPP 968
Query: 237 N----AMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVIS 292
N AM+ A GK E M + + P +F T++ C G + EALE+
Sbjct: 969 NVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRV 1028
Query: 293 KMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM 329
M +++ + Y ++ L G + A++L + M
Sbjct: 1029 VMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1065
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/413 (20%), Positives = 160/413 (38%), Gaps = 49/413 (11%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKT----GVTWSQMIGGFARNGDTATARRLF 60
+V T NA++ +++G+ S +EM + T++ +I G + L
Sbjct: 197 SVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLM 256
Query: 61 D--EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKK 114
E +VT+ ++ Y +KG +AA E+ + M + + ++ ++ C+
Sbjct: 257 QKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRS 316
Query: 115 GSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
+A+ + + R + +NT+I G+ G A Q EM + G P+ T
Sbjct: 317 NRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTF 376
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ 230
+++ G ++ +M+E K LT + L+D K + AR + +
Sbjct: 377 NALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKR 436
Query: 231 RNICC----WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSE 286
+C + MI G NG E + M I PD +T+ +++ G
Sbjct: 437 NGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKT 496
Query: 287 ALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGACR 346
A E++ ++ + Y ++ R G LKEA + + M +E G R
Sbjct: 497 AKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILE----------GHTR 546
Query: 347 THSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMVDG 399
H + NVL++++ A + E E MR + DG
Sbjct: 547 DHF---------------------TFNVLVTSLCKAGKVAEAEEFMRCMTSDG 578
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/283 (18%), Positives = 110/283 (38%), Gaps = 61/283 (21%)
Query: 87 EAAREVFE---LMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYV 143
+ AR + + LM ++ FV+ ++++ Y R+ + +++ +I Y+
Sbjct: 129 DPARHILKELSLMSGKSSFVFGALMTTY--------------RLCNSNPSVYDILIRVYL 174
Query: 144 QNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPF 203
+ G + +L+ F M GF P +T ++L +
Sbjct: 175 REGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV------------------------- 209
Query: 204 VLSGLVDMYAKCGDLVNARLVFEGFTQRNIC----CWNAMISGFAINGKCREVLEFFGRM 259
K G+ V+ + +R IC +N +I+ G + +M
Sbjct: 210 ----------KSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM 259
Query: 260 ENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRL 319
E P +T+ TVL G A+E++ M++ ++ + Y ++ L R+ R+
Sbjct: 260 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 319
Query: 320 KEAY----DLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVI 358
+ Y D+ KRM + PNE ++ + +A Q++
Sbjct: 320 AKGYLLLRDMRKRM-IHPNEVTYNTLINGFSNEGKVLIASQLL 361
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 102/206 (49%), Gaps = 1/206 (0%)
Query: 157 EMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCG 216
E+ +G PD V + +CA L L+ K++H + +P + + ++ M+ +C
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 217 DLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLS 276
+ +A+ VF+ +++ W+ M+ ++ NG + L F M ++P+ TFLTV
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 277 ACAHGGLLSEA-LEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNE 335
ACA G + EA L S + I +HY ++ +LG+ G L EA I+ +P EP
Sbjct: 346 ACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTA 405
Query: 336 TVLGAMLGACRTHSDMKMAEQVIKLI 361
AM R H D+ + + + +L+
Sbjct: 406 DFWEAMRNYARLHGDIDLEDYMEELM 431
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 107 MVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
++S + + S+ +A+ +F + + ++ W+ M+ Y NG G+ AL FEEM G +P+
Sbjct: 277 VISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPN 336
Query: 167 EFTVVSVLSACAQL-GLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA 221
E T ++V ACA + G+ +A M ++ G++ + KCG LV A
Sbjct: 337 EETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEA 392
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 164/377 (43%), Gaps = 23/377 (6%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMP----GKTGVTWSQMIGGFARNGDTATARRLF 60
+++T N +++G +G A L+ ++M VT+ ++ ++G TA A L
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 61 ---DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCK 113
+E +L V +++++DG + G ++ A +F M + N ++ ++ G+C
Sbjct: 252 RKMEERNIKLDAV-KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCN 310
Query: 114 KGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFT 169
G + + + R + ++ +I +V+ G A + +EM G PD T
Sbjct: 311 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 370
Query: 170 VVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT 229
S++ + LD Q+ ++ K N + L++ Y K + + +F +
Sbjct: 371 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 430
Query: 230 QRNICC----WNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLS 285
R + +N +I GF GK E F M + + P+ +T+ +L G
Sbjct: 431 LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESE 490
Query: 286 EALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPM---EPNETVLGAML 342
+ALE+ K+E +E+ I Y ++ + A ++ +A+DL +P+ +P M+
Sbjct: 491 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550
Query: 343 GACRTHSDMKMAEQVIK 359
G + AE + +
Sbjct: 551 GGLCKKGPLSEAELLFR 567
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 157/348 (45%), Gaps = 51/348 (14%)
Query: 1 MPERNV----VTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGD 52
M ERN+ V ++ +I G ++G +++A +F EM K +T++ +IGGF G
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 313
Query: 53 -TATARRLFDEAPHELK-GVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSS 106
A+ L D ++ VVT++V++D + ++G++ A E+ + M R + ++S
Sbjct: 314 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS 373
Query: 107 MVSGYCKKGSVAEAETIFGRIPVR----SLEIWNTMIAGYVQNGFGERALQAFEEMRAEG 162
++ G+CK+ + +A + + + ++ +N +I GY + + L+ F +M G
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433
Query: 163 FEPDEFTVVSVLSACAQLGLLDAGKQI-HHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNA 221
D T +++ +LG L+ K++ M+ K V P
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK---VPP------------------- 471
Query: 222 RLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHG 281
NI + ++ G NG+ + LE F ++E + D + ++ +
Sbjct: 472 ----------NIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 521
Query: 282 GLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM 329
+ +A ++ + ++ G+K Y M+ L + G L EA L ++M
Sbjct: 522 SKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 153/337 (45%), Gaps = 19/337 (5%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLF 60
N++T+N +I G+ G + + + +M + VT+S +I F + G A L
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356
Query: 61 DEAPHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPERNC----FVWSSMVSGYCKK 114
E H +T+T ++DG+ ++ ++ A ++ +LM + C ++ +++GYCK
Sbjct: 357 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKA 416
Query: 115 GSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
+ + +F ++ +R + +NT+I G+ + G A + F+EM + P+ T
Sbjct: 417 NRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTY 476
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF-- 228
+L G + +I IE ++ ++ + + ++ + +A +F
Sbjct: 477 KILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 229 --TQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSE 286
+ + +N MI G G E F +ME PD T+ ++ A G ++
Sbjct: 537 KGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATK 596
Query: 287 ALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAY 323
++++I +++ + ++D+L GRLK+++
Sbjct: 597 SVKLIEELKRCGFSVDASTIKMVIDMLS-DGRLKKSF 632
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 118/274 (43%), Gaps = 14/274 (5%)
Query: 71 VTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKGSVAEAETIFGR 126
+T++ +++G +G + A E+ + M E + +++V+G C G AEA + +
Sbjct: 159 ITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDK 218
Query: 127 IPVRSLEIWNTMIAGYVQN-----GFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLG 181
+ + N + G V N G A++ +M + D ++ + G
Sbjct: 219 MVEYGCQ-PNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHG 277
Query: 182 LLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQR----NICCWN 237
LD + + +E K +T N + L+ + G + + +R N+ ++
Sbjct: 278 SLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFS 337
Query: 238 AMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAY 297
+I F GK RE E M + I PD IT+ +++ L +A +++ M +
Sbjct: 338 VLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK 397
Query: 298 AIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPM 331
+ I+ + +++ +A R+ + +L ++M +
Sbjct: 398 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSL 431
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 122/266 (45%), Gaps = 25/266 (9%)
Query: 148 GERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSG 207
+ A+ F +M P + SA A+ D + +E K + N + LS
Sbjct: 69 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 208 LVDMYAKCGDLVNA-----RLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENL 262
+++ + +C L A +++ G+ + N ++ +I+G + G+ E LE RM +
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGY-EPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 263 NIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEA 322
+PD IT T+++ G +EA+ +I KM Y + YG +++++ ++G+ A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 323 YDLIKRMPMEPNETVLGAML------GACRTHSDMKMA-----EQVIKLIGTNSITRADS 371
+L+++ ME L A+ G C+ H + A E +K I TN IT
Sbjct: 248 MELLRK--MEERNIKLDAVKYSIIIDGLCK-HGSLDNAFNLFNEMEMKGITTNIIT---- 300
Query: 372 HNVLLSNIYAASEKWEKAEKMRGIMV 397
+N+L+ + + +W+ K+ M+
Sbjct: 301 YNILIGG-FCNAGRWDDGAKLLRDMI 325
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/357 (20%), Positives = 139/357 (38%), Gaps = 54/357 (15%)
Query: 59 LFDEAPHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYC 112
LF + H L V+ ++ + A+ + + + + M + N + S M++ +C
Sbjct: 75 LFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFC 134
Query: 113 KKGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEF 168
+ + A + G+I E ++T+I G G AL+ + M G +PD
Sbjct: 135 RCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLI 194
Query: 169 TVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF 228
T+ ++++ GL +GK+ M+ L+D + G
Sbjct: 195 TINTLVN-----GLCLSGKEAEAML--------------LIDKMVEYG------------ 223
Query: 229 TQRNICCWNAMISGFAINGKCRE-----VLEFFGRMENLNIRPDAITFLTVLSACAHGGL 283
C NA+ G +N C+ +E +ME NI+ DA+ + ++ G
Sbjct: 224 -----CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
Query: 284 LSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM---PMEPNETVLGA 340
L A + ++ME I I Y ++ AGR + L++ M + PN
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 341 MLGACRTHSDMKMAEQVIKLIGTNSITRADSHNVLLSNIYAASEKWEKAEKMRGIMV 397
++ + ++ AE++ K + I L + + +KA +M +MV
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 154/337 (45%), Gaps = 19/337 (5%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLF 60
NVVT+N++I G AS + +M + VT+S +I F + G A +L+
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 61 DEAPHEL--KGVVTWTVMVDGYARKGEMEAAREVFELMPERNCF----VWSSMVSGYCKK 114
DE + T++ +++G+ ++ A+ +FELM ++CF +++++ G+CK
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409
Query: 115 GSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
V E +F + R L + T+I G+ Q + A F++M ++G PD T
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ 230
+L G ++ + ++ ++ + + + +++ K G + + +F +
Sbjct: 470 SILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 529
Query: 231 R----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSE 286
+ N+ + M+SGF G E F M+ PD+ T+ T++ A G +
Sbjct: 530 KGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAA 589
Query: 287 ALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAY 323
+ E+I +M + G + ++L GRL +++
Sbjct: 590 SAELIREMRSCRFVGDASTIGLVTNML-HDGRLDKSF 625
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 151/361 (41%), Gaps = 22/361 (6%)
Query: 8 TWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLFD-- 61
T+N +I G R+ A + + M K VT+ ++ G + GD A L
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247
Query: 62 EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKGSV 117
E GVV + ++D + A +F M + N ++S++ C G
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 307
Query: 118 AEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSV 173
++A + + R + ++ +I +V+ G A + ++EM +PD FT S+
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367
Query: 174 LSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQR-- 231
++ LD K + ++ K N + L+ + K + +F +QR
Sbjct: 368 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427
Query: 232 --NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALE 289
N + +I GF +C F +M + + PD +T+ +L + G + AL
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALV 487
Query: 290 VISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPM---EPNETVLGAML-GAC 345
V ++ +E I Y M++ + +AG++++ +DL + + +PN M+ G C
Sbjct: 488 VFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 547
Query: 346 R 346
R
Sbjct: 548 R 548
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/380 (19%), Positives = 164/380 (43%), Gaps = 25/380 (6%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEM------PGKTGVTWSQMIGGFARNGDTATA 56
+ ++VT+ +++G + GD++ A + ++M PG V ++ +I + A
Sbjct: 218 QPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGV--VIYNTIIDALCNYKNVNDA 275
Query: 57 RRLFDEAPHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSG 110
LF E ++ VVT+ ++ G A + M ER N +S+++
Sbjct: 276 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 335
Query: 111 YCKKGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
+ K+G + EAE ++ + RS++ ++++I G+ + + A FE M ++ P+
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 167 EFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFE 226
T +++ + +D G ++ + + L N + L+ + + + NA++VF+
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFK 455
Query: 227 GFTQR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGG 282
+I ++ ++ G NGK L F ++ + PD T+ ++ G
Sbjct: 456 QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAG 515
Query: 283 LLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME---PNETVLG 339
+ + ++ + ++ + Y M+ R G +EA L + M E P+
Sbjct: 516 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYN 575
Query: 340 AMLGACRTHSDMKMAEQVIK 359
++ A D + ++I+
Sbjct: 576 TLIRAHLRDGDKAASAELIR 595
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/336 (17%), Positives = 139/336 (41%), Gaps = 43/336 (12%)
Query: 70 VVTWTVMVDGYARKGEMEAAREVF----ELMPERNCFVWSSMVSGYCKKGSVAEAETIFG 125
+ T++++++ + R+ ++ A V +L E + +S+++G+C +++A ++ G
Sbjct: 116 LYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVG 175
Query: 126 RIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLG 181
++ + +NT+I G ++ A+ + M +G +PD T V++ + G
Sbjct: 176 QMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRG 235
Query: 182 LLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMIS 241
+D + +E +G + + +N +I
Sbjct: 236 DIDLALSLLKKME-------------------------------QGKIEPGVVIYNTIID 264
Query: 242 GFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEM 301
+ L F M+N IRP+ +T+ +++ + G S+A ++S M I
Sbjct: 265 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 324
Query: 302 GIKHYGCMVDLLGRAGRLKEA---YDLIKRMPMEPNETVLGAMLGACRTHSDMKMAEQVI 358
+ + ++D + G+L EA YD + + ++P+ +++ H + A+ +
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 384
Query: 359 KL-IGTNSITRADSHNVLLSNIYAASEKWEKAEKMR 393
+L I + ++N L+ A E E R
Sbjct: 385 ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 95/204 (46%), Gaps = 9/204 (4%)
Query: 149 ERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGL 208
+ A+ F +M P +LSA A++ D + +++ ++ N + S L
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 209 VDMYAKCGDL-----VNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLN 263
++ + + L V A+++ G+ + +I N++++GF + + + G+M +
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGY-EPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 264 IRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAY 323
+PD+ TF T++ SEA+ ++ +M + + YG +V+ L + G + A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 324 DLIKRM---PMEPNETVLGAMLGA 344
L+K+M +EP + ++ A
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDA 265
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 159/367 (43%), Gaps = 24/367 (6%)
Query: 3 ERNVVTWNAMISG-YMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATAR 57
+ N VT+N +I G ++ N E+ +L+ + M + T+ ++ G + GD A
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALI-DRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 58 RLFD--EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGY 111
L E VV +T ++D + A +F M + N ++S++
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 112 CKKGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDE 167
C G ++A + + R + ++ +I +V+ G A + ++EM +PD
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 168 FTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEG 227
FT S+++ LD K + ++ K N + L+ + K + +F
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 228 FTQR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGL 283
+QR N +N +I G G C + F +M + + PD IT+ +L G
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Query: 284 LSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPM---EPNETVLGA 340
L +AL V ++ +E I Y M++ + +AG++++ +DL + + +PN +
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540
Query: 341 ML-GACR 346
M+ G CR
Sbjct: 541 MISGFCR 547
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 55/223 (24%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLF 60
NVVT+N +I G+ + +E +F EM + VT++ +I G + GD A+++F
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 61 -----DEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMP----ERNCFVWSSMVSGY 111
D P + ++T+++++DG + G++E A VFE + E + + ++ M+ G
Sbjct: 454 KKMVSDGVPPD---IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510
Query: 112 CKKGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAF------------ 155
CK G V + +F + ++ ++ I+ TMI+G+ + G E A F
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNS 570
Query: 156 -----------------------EEMRAEGFEPDEFTVVSVLS 175
+EMR+ GF D T+ V++
Sbjct: 571 GTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 107/270 (39%), Gaps = 42/270 (15%)
Query: 135 WNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIE 194
+N +I + + AL +M G+EPD T+ S+L+ GK+I +
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCH------GKRISEAVA 171
Query: 195 HKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLE 254
LV+ V E Q N +N +I G ++ K E +
Sbjct: 172 -----------------------LVDQMFVME--YQPNTVTFNTLIHGLFLHNKASEAVA 206
Query: 255 FFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLG 314
RM +PD T+ TV++ G + AL ++ KME IE + Y ++D L
Sbjct: 207 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC 266
Query: 315 RAGRLKEAYDLIKRMP---MEPNETVLGAMLGACRTHSDMKMAEQVIKLIGTNSITRADS 371
+ +A +L M + PN +++ + A +++ ++ I R +
Sbjct: 267 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL----SDMIERKIN 322
Query: 372 HNVL----LSNIYAASEKWEKAEKMRGIMV 397
NV+ L + + K +AEK+ M+
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 175/403 (43%), Gaps = 65/403 (16%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTG-----VTWSQMIGGFARNGDTATARRL 59
++ T++ I+ + R + A V +M K G VT S ++ G+ + + A L
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMM-KLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 60 FDEAPH--ELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNC----FVWSSMVSGYCK 113
D+ T+T ++ G + A + + M +R C + ++V+G CK
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235
Query: 114 KGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFT 169
+G + A ++ ++ +E I+NT+I G + + AL F EM +G PD FT
Sbjct: 236 RGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFT 295
Query: 170 VVSVLSACAQLGL-LDAGKQIHHMIEHKRLTVNPFVL--SGLVDMYAKCGDLVNARLVFE 226
S++S G DA + + MIE K +NP V+ S L+D + K G LV A +++
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDMIERK---INPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 227 GFTQR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGG 282
+R +I ++++I+GF ++ + E F M + + P+ +T+ T++
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412
Query: 283 LLSEALE-----------------------------------VISKMEAYAIEMGIKHYG 307
+ E +E V +M + + I Y
Sbjct: 413 RVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 472
Query: 308 CMVDLLGRAGRLKEA---YDLIKRMPMEPNETVLGAML-GACR 346
++D L + G+L +A ++ ++R MEP+ M+ G C+
Sbjct: 473 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 152/337 (45%), Gaps = 19/337 (5%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLF 60
+V T++++IS G AS + +M + VT+S +I F + G A +L+
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 61 DEAPHEL--KGVVTWTVMVDGYARKGEMEAAREVFELMPERNCF----VWSSMVSGYCKK 114
DE + T++ +++G+ ++ A+ +FELM ++CF +S+++ G+CK
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411
Query: 115 GSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
V E +F + R L + T+I G+ Q + A F++M + G P+ T
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ 230
+L + G L + ++ + + + + +++ K G + + +F +
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531
Query: 231 R----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSE 286
+ N+ +N MISGF G E +M+ P++ T+ T++ A G
Sbjct: 532 KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREA 591
Query: 287 ALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAY 323
+ E+I +M + G + ++L GRL +++
Sbjct: 592 SAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKSF 627
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/378 (20%), Positives = 168/378 (44%), Gaps = 21/378 (5%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEM-PGKTG---VTWSQMIGGFARNGDTATARR 58
+ ++VT+ +++G + GD++ A + ++M GK V ++ +I G + A
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALN 279
Query: 59 LFDEAPHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYC 112
LF E ++ V T++ ++ G A + M ER N +S+++ +
Sbjct: 280 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 339
Query: 113 KKGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEF 168
K+G + EAE ++ + RS++ ++++I G+ + + A FE M ++ P+
Sbjct: 340 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 399
Query: 169 TVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF 228
T +++ + ++ G ++ + + L N + L+ + + D NA++VF+
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 459
Query: 229 T----QRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLL 284
NI +N ++ G NGK + + F ++ + PD T+ ++ G +
Sbjct: 460 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKV 519
Query: 285 SEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME---PNETVLGAM 341
+ E+ + + + Y M+ R G +EA L+K+M + PN +
Sbjct: 520 EDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTL 579
Query: 342 LGACRTHSDMKMAEQVIK 359
+ A D + + ++IK
Sbjct: 580 IRARLRDGDREASAELIK 597
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/431 (19%), Positives = 175/431 (40%), Gaps = 57/431 (13%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEM------PGKTG------------------- 37
E ++VT +++++GY + + A + ++M P
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 38 --------------VTWSQMIGGFARNGDTATARRLFD--EAPHELKGVVTWTVMVDGYA 81
VT+ ++ G + GD A L E VV + ++DG
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 269
Query: 82 RKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLE---- 133
+ M+ A +F M + + F +SS++S C G ++A + + R +
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVV 329
Query: 134 IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMI 193
++ +I +V+ G A + ++EM +PD FT S+++ LD K + ++
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389
Query: 194 EHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQR----NICCWNAMISGFAINGKC 249
K N S L+ + K + +F +QR N + +I GF C
Sbjct: 390 ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 449
Query: 250 REVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCM 309
F +M ++ + P+ +T+ +L G L++A+ V ++ +E I Y M
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 310 VDLLGRAGRLKEAYDLIKRMPME---PNETVLGAML-GACRTHSDMKMAEQVIKLIGTNS 365
++ + +AG++++ ++L + ++ PN M+ G CR S + + K+
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGP 569
Query: 366 ITRADSHNVLL 376
+ + ++N L+
Sbjct: 570 LPNSGTYNTLI 580
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 160/364 (43%), Gaps = 30/364 (8%)
Query: 6 VVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLFD 61
V+T+N +I+G G + A+ + +M GK VT+ ++ G + GDT +A L
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Query: 62 --EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKG 115
E H VV ++ ++D + G A+ +F M E+ N F ++ M+ G+C G
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 116 SVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVV 171
++A+ + + R + +N +I+ V+ G A + +EM PD T
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405
Query: 172 SVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLS--GLVDMYAKCGDLVNARLVFEGFT 229
S++ + D K HM + L +P V++ ++D+Y + + + +
Sbjct: 406 SMIYGFCKHNRFDDAK---HMFD---LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 230 QR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLS 285
+R N +N +I GF + F M + + PD IT +L L
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519
Query: 286 EALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPM---EPNETVLGAML 342
EALE+ ++ I++ Y ++ + + ++ EA+DL +P+ EP+ M+
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Query: 343 -GAC 345
G C
Sbjct: 580 SGFC 583
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 170/388 (43%), Gaps = 33/388 (8%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMP----GKTGVTWSQMIGGFARNGDTATARRLF 60
+VVT+ +++G + GD +SA + +M V +S +I ++G + A+ LF
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 61 DE------APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSG 110
E AP+ V T+ M+DG+ G A+ + M ER + +++++S
Sbjct: 320 SEMLEKGIAPN----VFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375
Query: 111 YCKKGSVAEAETIFGRIPVRSL----EIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
K+G + EAE + + R + +N+MI G+ ++ + A F+ M + PD
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PD 431
Query: 167 EFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFE 226
T +++ + +D G Q+ I + L N + L+ + + +L A+ +F+
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Query: 227 GFTQRNIC----CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGG 282
+C N ++ GF N K E LE F ++ I D + + ++ G
Sbjct: 492 EMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGS 551
Query: 283 LLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMP---MEPNETVLG 339
+ EA ++ + + +E ++ Y M+ + +A L +M EP+ +
Sbjct: 552 KVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYN 611
Query: 340 AMLGACRTHSDMKMAEQVIKLIGTNSIT 367
++ C ++ + ++I + +N +
Sbjct: 612 TLIRGCLKAGEIDKSIELISEMRSNGFS 639
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 151/340 (44%), Gaps = 29/340 (8%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLF 60
NV T+N MI G+ G A + +M + +T++ +I + G A +L
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 61 DEAPHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVA 118
DE H VT+ M+ G+ + + A+ +F+LM + +++++ YC+ V
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVD 449
Query: 119 EAETIFGRIPVRSL----EIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVL 174
E + I R L +NT+I G+ + A F+EM + G PD T +L
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 509
Query: 175 SACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF----TQ 230
+ L+ ++ +I+ ++ ++ + ++ K + A +F +
Sbjct: 510 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569
Query: 231 RNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEV 290
++ +N MISGF + F +M++ PD T+ T++ C G + +++E+
Sbjct: 570 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629
Query: 291 ISKM-------EAYAIEMGIKHYGCMVDLLGRAGRLKEAY 323
IS+M +A+ I+M + DL+ GRL +++
Sbjct: 630 ISEMRSNGFSGDAFTIKM-------VADLI-TDGRLDKSF 661
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/337 (18%), Positives = 134/337 (39%), Gaps = 62/337 (18%)
Query: 33 PGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELK----GVVTWTVMVDGYARKGEMEA 88
P T V +++IG F R A L+ + E++ + ++ +++ + ++
Sbjct: 102 PFYTAVDCNKVIGVFVRMNRPDVAISLYRKM--EIRRIPLNIYSFNILIKCFCDCHKLSF 159
Query: 89 AREVF----ELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQ 144
+ F +L + + +++++ G C + ++EA +FG + V+
Sbjct: 160 SLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM---------------VE 204
Query: 145 NGFGERALQAFEEMRAEGFEPDEFTVVSVLSA-CAQLGLLDAGKQIHHMIEHKRLTVNPF 203
GF E A+ F++M G P T ++++ C + +L+A VN
Sbjct: 205 TGFLE-AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAA-----------LVNKM 252
Query: 204 VLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLN 263
V GL ++ + +++G G + L +ME +
Sbjct: 253 VGKGL---------------------HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 264 IRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAY 323
I+PD + + ++ G S+A + S+M I + Y CM+D GR +A
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 324 DLIKRM---PMEPNETVLGAMLGACRTHSDMKMAEQV 357
L++ M + P+ A++ A + AE++
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 160/364 (43%), Gaps = 30/364 (8%)
Query: 6 VVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLFD 61
V+T+N +I+G G + A+ + +M GK VT+ ++ G + GDT +A L
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Query: 62 --EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKG 115
E H VV ++ ++D + G A+ +F M E+ N F ++ M+ G+C G
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 116 SVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVV 171
++A+ + + R + +N +I+ V+ G A + +EM PD T
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405
Query: 172 SVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLS--GLVDMYAKCGDLVNARLVFEGFT 229
S++ + D K HM + L +P V++ ++D+Y + + + +
Sbjct: 406 SMIYGFCKHNRFDDAK---HMFD---LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 230 QR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLS 285
+R N +N +I GF + F M + + PD IT +L L
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519
Query: 286 EALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPM---EPNETVLGAML 342
EALE+ ++ I++ Y ++ + + ++ EA+DL +P+ EP+ M+
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Query: 343 -GAC 345
G C
Sbjct: 580 SGFC 583
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 170/388 (43%), Gaps = 33/388 (8%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMP----GKTGVTWSQMIGGFARNGDTATARRLF 60
+VVT+ +++G + GD +SA + +M V +S +I ++G + A+ LF
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 61 DE------APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSG 110
E AP+ V T+ M+DG+ G A+ + M ER + +++++S
Sbjct: 320 SEMLEKGIAPN----VFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375
Query: 111 YCKKGSVAEAETIFGRIPVRSL----EIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
K+G + EAE + + R + +N+MI G+ ++ + A F+ M + PD
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PD 431
Query: 167 EFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFE 226
T +++ + +D G Q+ I + L N + L+ + + +L A+ +F+
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Query: 227 GFTQRNIC----CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGG 282
+C N ++ GF N K E LE F ++ I D + + ++ G
Sbjct: 492 EMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGS 551
Query: 283 LLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMP---MEPNETVLG 339
+ EA ++ + + +E ++ Y M+ + +A L +M EP+ +
Sbjct: 552 KVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYN 611
Query: 340 AMLGACRTHSDMKMAEQVIKLIGTNSIT 367
++ C ++ + ++I + +N +
Sbjct: 612 TLIRGCLKAGEIDKSIELISEMRSNGFS 639
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 1 MPERNVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATA 56
M +VVT+N +I Y R ++ + E+ + T++ +I GF + A
Sbjct: 427 MASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAA 486
Query: 57 RRLFDEAPHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMP----ERNCFVWSSMVSG 110
+ LF E +T +++ G+ ++E A E+FE++ + + ++ ++ G
Sbjct: 487 QDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHG 546
Query: 111 YCKKGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
CK V EA +F +P+ +E +N MI+G+ A F +M+ G EPD
Sbjct: 547 MCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPD 606
Query: 167 EFTVVSVLSACAQLGLLDAGKQI 189
T +++ C + G +D ++
Sbjct: 607 NSTYNTLIRGCLKAGEIDKSIEL 629
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 91/180 (50%), Gaps = 14/180 (7%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLF 60
N T+N +I G+ ++ +A +F+EM +T + ++ GF N A LF
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525
Query: 61 D--EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMP----ERNCFVWSSMVSGYCKK 114
+ + V + +++ G + +++ A ++F +P E + ++ M+SG+C K
Sbjct: 526 EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGK 585
Query: 115 GSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
++++A +F ++ E +NT+I G ++ G +++++ EMR+ GF D FT+
Sbjct: 586 SAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 645
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/337 (18%), Positives = 134/337 (39%), Gaps = 62/337 (18%)
Query: 33 PGKTGVTWSQMIGGFARNGDTATARRLFDEAPHELK----GVVTWTVMVDGYARKGEMEA 88
P T V +++IG F R A L+ + E++ + ++ +++ + ++
Sbjct: 102 PFYTAVDCNKVIGVFVRMNRPDVAISLYRKM--EIRRIPLNIYSFNILIKCFCDCHKLSF 159
Query: 89 AREVF----ELMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLEIWNTMIAGYVQ 144
+ F +L + + +++++ G C + ++EA +FG + V+
Sbjct: 160 SLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM---------------VE 204
Query: 145 NGFGERALQAFEEMRAEGFEPDEFTVVSVLSA-CAQLGLLDAGKQIHHMIEHKRLTVNPF 203
GF E A+ F++M G P T ++++ C + +L+A VN
Sbjct: 205 TGFLE-AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAA-----------LVNKM 252
Query: 204 VLSGLVDMYAKCGDLVNARLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLN 263
V GL ++ + +++G G + L +ME +
Sbjct: 253 VGKGL---------------------HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 264 IRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAY 323
I+PD + + ++ G S+A + S+M I + Y CM+D GR +A
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 324 DLIKRM---PMEPNETVLGAMLGACRTHSDMKMAEQV 357
L++ M + P+ A++ A + AE++
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 172/392 (43%), Gaps = 21/392 (5%)
Query: 5 NVVTWNAMISG-YMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRL 59
+ T+ +I G ++ N E+ +LV ++M + VT+ ++ G + GD A L
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALV-DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNL 245
Query: 60 FD--EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCK 113
+ EA VV + ++D + +E A ++F M + N ++S+++ C
Sbjct: 246 LNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCN 305
Query: 114 KGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFT 169
G ++A + + + + +N +I + + G A + EEM +PD T
Sbjct: 306 YGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTIT 365
Query: 170 VVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT 229
+++ LD KQ+ + K N + L++ + KC + + +F +
Sbjct: 366 YNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMS 425
Query: 230 QR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLS 285
QR N + +I GF G C F +M + + D +T+ +L G L
Sbjct: 426 QRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLD 485
Query: 286 EALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPMEPNETVLGAMLGAC 345
AL + ++ +E+ I Y M++ + +AG++ EA+DL + ++P+ M+
Sbjct: 486 TALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGL 545
Query: 346 RTHSDMKMAEQVI-KLIGTNSITRADSHNVLL 376
+ ++ A+ + K+ ++ + ++N L+
Sbjct: 546 CSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 151/346 (43%), Gaps = 56/346 (16%)
Query: 3 ERNVVTWNAMISGYMRNGD----------MESASL------------------------- 27
+ ++VT+ +++G + GD ME+A +
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVD 279
Query: 28 VFEEMPGK----TGVTWSQMIGGFARNGDTATARRLFDEAPHEL--KGVVTWTVMVDGYA 81
+F EM K VT++ +I G + A RL + VVT+ ++D +
Sbjct: 280 LFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFF 339
Query: 82 RKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKGSVAEAETIF----GRIPVRSLE 133
++G++ A ++ E M +R + ++ +++G+C + EA+ +F + + +++
Sbjct: 340 KEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ 399
Query: 134 IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMI 193
+NT+I G+ + E ++ F EM G + T +++ Q G D+ + + +
Sbjct: 400 TYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM 459
Query: 194 EHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQR----NICCWNAMISGFAINGKC 249
R+ + S L+ G L A ++F+ + NI +N MI G GK
Sbjct: 460 VSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKV 519
Query: 250 REVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKME 295
E + F +L+I+PD +T+ T++S LL EA ++ KM+
Sbjct: 520 GEAWDLFC---SLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMK 562
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 85/177 (48%), Gaps = 34/177 (19%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
N VT+ +I G+ + GD +SA +VF++M + P
Sbjct: 432 NTVTYTTIIQGFFQAGDCDSAQMVFKQMVS--------------------------NRVP 465
Query: 65 HELKGVVTWTVMVDGYARKGEMEAAREVFELMP----ERNCFVWSSMVSGYCKKGSVAEA 120
+ ++T+++++ G G+++ A +F+ + E N F++++M+ G CK G V EA
Sbjct: 466 TD---IMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA 522
Query: 121 ETIFGRIPVR-SLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
+F + ++ + +NTMI+G + A F +M+ +G P+ T +++ A
Sbjct: 523 WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/344 (17%), Positives = 138/344 (40%), Gaps = 54/344 (15%)
Query: 69 GVVTWTVMVDGYARKGEMEAAREVFELMP----ERNCFVWSSMVSGYCKKGSVAEAETIF 124
+V + ++ A+ + E + E M + + +S ++ +C++ ++ A +
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 125 GRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQL 180
++ E ++++ GY + A+ ++M G++PD FT ++
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTL------- 194
Query: 181 GLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCG---DLVNARLVFEGFTQR------ 231
IH + H + + LVD + G DLV V G +R
Sbjct: 195 --------IHGLFLHNKAS----EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 232 --------------NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSA 277
N+ +N +I ++ F ME IRP+ +T+ ++++
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 278 CAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM---PMEPN 334
+ G S+A ++S M I + + ++D + G+L EA L + M ++P+
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 335 ETVLGAMLGACRTHSDMKMAEQVIK-LIGTNSITRADSHNVLLS 377
++ H+ + A+Q+ K ++ + + ++N L++
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLIN 406
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 164/366 (44%), Gaps = 46/366 (12%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLFDEAP 64
N+ +NA+I + A L+F+ M GK G+ R D
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRM-GKIGL----------RPND------------ 402
Query: 65 HELKGVVTWTVMVDGYARKGEMEAAR----EVFELMPERNCFVWSSMVSGYCKKGSVAEA 120
VT+++++D + R+G+++ A E+ + + + + ++S+++G+CK G ++ A
Sbjct: 403 ------VTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Query: 121 ETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSA 176
E + + LE + +++ GY G +AL+ + EM +G P +T ++LS
Sbjct: 457 EGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSG 516
Query: 177 CAQLGLL-DAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQRNIC- 234
+ GL+ DA K + M E + N + +++ Y + GD+ A + T++ I
Sbjct: 517 LFRAGLIRDAVKLFNEMAEWN-VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP 575
Query: 235 ---CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVI 291
+ +I G + G+ E F + N + I + +L G L EAL V
Sbjct: 576 DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVC 635
Query: 292 SKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMP---MEPNETVLGAMLGACRTH 348
+M +++ + YG ++D + K + L+K M ++P++ + +M+ A
Sbjct: 636 QEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKT 695
Query: 349 SDMKMA 354
D K A
Sbjct: 696 GDFKEA 701
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 163/378 (43%), Gaps = 49/378 (12%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARR 58
E VVT+ +++ GY G + A ++ EM GK + T++ ++ G R G A +
Sbjct: 469 EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVK 528
Query: 59 LFDE-APHELK-GVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYC 112
LF+E A +K VT+ VM++GY +G+M A E + M E+ + + + ++ G C
Sbjct: 529 LFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLC 588
Query: 113 KKGSVAEAETIFGRIPVRSLEI----WNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEF 168
G +EA+ + + E+ + ++ G+ + G E AL +EM G + D
Sbjct: 589 LTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLD-- 646
Query: 169 TVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF 228
L+ G I ++HK + +L + D K D++
Sbjct: 647 -------------LVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVI--------- 684
Query: 229 TQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEAL 288
+ +MI + G +E + M N P+ +T+ V++ G ++EA
Sbjct: 685 -------YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 289 EVISKMEAYAIEMGIKHYGCMVDLLGRA----GRLKEAYDLIKRMPMEPNETVLGAMLGA 344
+ SKM+ + YGC +D+L + + E ++ I + + T + G
Sbjct: 738 VLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGF 797
Query: 345 CRTHSDMKMAEQVIKLIG 362
CR + +E + ++IG
Sbjct: 798 CRQGRIEEASELITRMIG 815
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 154/356 (43%), Gaps = 31/356 (8%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGV----TWSQMIGGFARNGDTATARRLF 60
N VT+N MI GY GDM A +EM K V ++ +I G G + A+
Sbjct: 541 NRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFV 600
Query: 61 D---EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCK 113
D + EL + +T ++ G+ R+G++E A V + M +R + + ++ G K
Sbjct: 601 DGLHKGNCELNEI-CYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK 659
Query: 114 KGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFT 169
+ + R L+ I+ +MI + G + A ++ M EG P+E T
Sbjct: 660 HKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVT 719
Query: 170 VVSVLSACAQLGLLDAGKQIHHMIEH-----KRLTVNPFV---LSGLVDMYAKCGDLVNA 221
+V++ + G ++ + + ++ ++T F+ G VDM K +L NA
Sbjct: 720 YTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDM-QKAVELHNA 778
Query: 222 RLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHG 281
+ +G N +N +I GF G+ E E RM + PD IT+ T+++
Sbjct: 779 --ILKGLLA-NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRR 835
Query: 282 GLLSEALEVISKMEAYAIEMGIKHYGCMVD---LLGRAGRLKEAYDLIKRMPMEPN 334
+ +A+E+ + M I Y ++ + G G+ E + + R + PN
Sbjct: 836 NDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 149/351 (42%), Gaps = 69/351 (19%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKT----GVTWSQMIGGFARNGDTATARRLF 60
N+V +N +I G + + A + +++ GK VT+ ++ G + + +
Sbjct: 261 NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMM 320
Query: 61 DE------APHELKGVVTWTVMVDGYARKGEMEAA----REVFELMPERNCFVWSSMVSG 110
DE +P E + +V+G ++G++E A + V + N FV+++++
Sbjct: 321 DEMLCLRFSPSE----AAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDS 376
Query: 111 YCKKGSVAEAETIF---GRIPVRSLEI-WNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
CK EAE +F G+I +R ++ ++ +I + + G + AL EM G
Sbjct: 377 LCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL--- 433
Query: 167 EFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFE 226
+L+V P+ + L++ + K GD+ A E
Sbjct: 434 ------------------------------KLSVYPY--NSLINGHCKFGDISAA----E 457
Query: 227 GF--------TQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSAC 278
GF + + + +++ G+ GK + L + M I P TF T+LS
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Query: 279 AHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM 329
GL+ +A+++ ++M + ++ Y M++ G + +A++ +K M
Sbjct: 518 FRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 159/388 (40%), Gaps = 60/388 (15%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLF 60
N+V +N +I GY + GD+E+A LVF+E+ K T T+ MI GF + GD + RL
Sbjct: 239 NIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLL 298
Query: 61 DEA---------------------------PHELKG----------VVTWTVMVDGYARK 83
E P E G V T+ ++++ ++
Sbjct: 299 SEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKE 358
Query: 84 GEMEAAREVFE------LMPERNCFVWSSMVSGYCKKGSVAEAETIFGRIPVR----SLE 133
G+ E A + L+P N ++ ++ YCK A + ++ R +
Sbjct: 359 GKKEVAVGFLDEASKKGLIP--NNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIV 416
Query: 134 IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMI 193
+ +I G V +G + A+ ++ G PD ++S + G K + +
Sbjct: 417 TYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEM 476
Query: 194 EHKRLTVNPFVLSGLVDMYAKCGDLVNARLVF----EGFTQRNICCWNAMISGFAINGKC 249
+ + + +V + L+D + + GD AR VF E + ++ NAMI GF +G
Sbjct: 477 LDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGML 536
Query: 250 REVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCM 309
E L RM ++ PD T+ T++ ++ A+++ ME + + Y +
Sbjct: 537 DEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSL 596
Query: 310 VDLLGRAGRLKEAYDLIKRMPME---PN 334
++ G K A + K M + PN
Sbjct: 597 INGFCCQGDFKMAEETFKEMQLRDLVPN 624
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/425 (20%), Positives = 168/425 (39%), Gaps = 74/425 (17%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEM--PGKTGVTWSQ--MIGGFARNGDTATARRLF 60
+V+ N+++S +++ + A V++EM G + +S ++ G G R+L
Sbjct: 169 DVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLI 228
Query: 61 DE--APHELKGVVTWTVMVDGYARKGEMEAAREVFE------LMPERNCFVWSSMVSGYC 112
+ + +V + ++ GY + G++E A VF+ MP F +M++G+C
Sbjct: 229 EGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETF--GTMINGFC 286
Query: 113 KKGSVAEAETIFGRIPVRSLEI-------------------------------------- 134
K+G ++ + + R L +
Sbjct: 287 KEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVA 346
Query: 135 -WNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLD-AGKQIHHM 192
+N +I + G E A+ +E +G P+ + ++ A + D A K + M
Sbjct: 347 TYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQM 406
Query: 193 IEH--------KRLTVNPFVLSGLVDMYAKCGDLVN--ARLVFEGFTQRNICCWNAMISG 242
E + ++ V+SG +D D VN +L+ G + + +N ++SG
Sbjct: 407 AERGCKPDIVTYGILIHGLVVSGHMD------DAVNMKVKLIDRGVSP-DAAIYNMLMSG 459
Query: 243 FAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMG 302
G+ F M + NI PDA + T++ G EA +V S +++
Sbjct: 460 LCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVD 519
Query: 303 IKHYGCMVDLLGRAGRLKEAYDLIKRMPME---PNETVLGAMLGACRTHSDMKMAEQVIK 359
+ H+ M+ R+G L EA + RM E P++ ++ DM A ++ +
Sbjct: 520 VVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR 579
Query: 360 LIGTN 364
+ N
Sbjct: 580 YMEKN 584
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 29/203 (14%)
Query: 8 TWNAMISGYMRNGDMESASLVFEEMPGKTG----VTWSQMIGGFARNGDTATARRLFDEA 63
T++ +I GY++ DM +A +F M VT++ +I GF GD A F E
Sbjct: 557 TYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEM 616
Query: 64 PHE--LKGVVTWTVMVDGYARKGE-MEAAREVFELMPERNCF----VWSSMVSGYCKKGS 116
+ VVT+T ++ A++ +E A +ELM C ++ ++ G+ KK S
Sbjct: 617 QLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTS 676
Query: 117 ---VAEAE-------TIFGRIPVR-SLEIWNTMIAGY-------VQNGFGERALQAFEEM 158
+AE + ++F R + W+ A Y +G + A ++M
Sbjct: 677 GKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKM 736
Query: 159 RAEGFEPDEFTVVSVLSACAQLG 181
+GF PD + ++L +G
Sbjct: 737 VKKGFSPDPVSFAAILHGFCVVG 759
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 188/440 (42%), Gaps = 73/440 (16%)
Query: 2 PERNVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATAR 57
P NVVT+ +I+G+ + G+M+ A +F+ M + + +S +I G+ + G
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 58 RLFDEAPHELKG----VVTWTVMVDGYARKGEMEAAREVFELM----PERNCFVWSSMVS 109
+LF +A H KG VV ++ +D Y + G++ A V++ M N ++ ++
Sbjct: 342 KLFSQALH--KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIK 399
Query: 110 GYCKKGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEP 165
G C+ G + EA ++G+I R +E ++++I G+ + G +E+M G+ P
Sbjct: 400 GLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP 459
Query: 166 DEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVF 225
D V+ GL G +H M R +V S
Sbjct: 460 D-----VVIYGVLVDGLSKQGLMLHAM----RFSVKMLGQS------------------- 491
Query: 226 EGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVL-------SAC 278
+ N+ +N++I G+ + E L+ F M I+PD TF TV+ + C
Sbjct: 492 ---IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFC 548
Query: 279 AHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM---PMEPNE 335
H + L++ M+ I I ++ LL + R+++A + MEP+
Sbjct: 549 KHMK-PTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDI 607
Query: 336 TVLGAMLGACRTHSDMKMAEQVIKLI-----GTNSITRADSHNVLLSNIYAASEKWEKAE 390
M+ + + AE++ +L+ G N++T +L ++ + + A
Sbjct: 608 VTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLT-----ILIHVLCKNNDMDGAI 662
Query: 391 KMRGIMVDGESEKIA---GC 407
+M IM + S+ A GC
Sbjct: 663 RMFSIMAEKGSKPNAVTYGC 682
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/350 (19%), Positives = 161/350 (46%), Gaps = 26/350 (7%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEM----PGKTGVTWSQMIGGFARNGDTATARRLF 60
+VV +++ I Y+++GD+ +AS+V++ M VT++ +I G ++G A ++
Sbjct: 355 DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMY 414
Query: 61 DEAPHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPE----RNCFVWSSMVSGYCKK 114
+ +VT++ ++DG+ + G + + ++E M + + ++ +V G K+
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQ 474
Query: 115 GSVAEA----ETIFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
G + A + G+ ++ ++N++I G+ + + AL+ F M G +PD T
Sbjct: 475 GLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATF 534
Query: 171 VSVLSA-------CAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARL 223
+V+ C + G Q+ +++ +++ + V + ++ + KC + +A
Sbjct: 535 TTVMRVSIMEDAFCKHMKP-TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASK 593
Query: 224 VF----EGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA 279
F EG + +I +N MI G+ + E F ++ P+ +T ++
Sbjct: 594 FFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLC 653
Query: 280 HGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM 329
+ A+ + S M + YGC++D ++ ++ ++ L + M
Sbjct: 654 KNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 703
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 132/316 (41%), Gaps = 16/316 (5%)
Query: 66 ELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFVWSSMVSGYCKKGSVAEAET--- 122
E GV ++D KGE+ A + L+ ER V + K SV + E
Sbjct: 213 EPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASR 272
Query: 123 ----IFGRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACA 178
+ P ++ + T+I G+ + G +RA F+ M G EPD +++
Sbjct: 273 LLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYF 332
Query: 179 QLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF----TQRNIC 234
+ G+L G ++ HK + ++ V S +D+Y K GDL A +V++ N+
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVV 392
Query: 235 CWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKM 294
+ +I G +G+ E +G++ + P +T+ +++ G L + M
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 295 EAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM---PMEPNETVLGAML-GACRTHSD 350
+ YG +VD L + G + A +M + N V +++ G CR +
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR- 511
Query: 351 MKMAEQVIKLIGTNSI 366
A +V +L+G I
Sbjct: 512 FDEALKVFRLMGIYGI 527
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 14/180 (7%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMP----GKTGVTWSQMIGGFARNGDTATARR 58
E ++VT+N MI GY ++ A +FE + G VT + +I +N D A R
Sbjct: 604 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 663
Query: 59 LFDEAPHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYC 112
+F + VT+ ++D +++ ++E + ++FE M E+ + +S ++ G C
Sbjct: 664 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 723
Query: 113 KKGSVAEAETIFGR-IPVRSLE---IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEF 168
K+G V EA IF + I + L + +I GY + G A +E M G +PD+
Sbjct: 724 KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 71/166 (42%), Gaps = 10/166 (6%)
Query: 70 VVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKGSVAEAETIFG 125
+VT+ M+ GY ++ A +FEL+ N + ++ CK + A +F
Sbjct: 607 IVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFS 666
Query: 126 RIPVRSLEIWNTMIAGYVQNGFG-----ERALQAFEEMRAEGFEPDEFTVVSVLSACAQL 180
+ + + N + G + + F E + + FEEM+ +G P + ++ +
Sbjct: 667 IMAEKGSK-PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKR 725
Query: 181 GLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFE 226
G +D I H +L + + L+ Y K G LV A L++E
Sbjct: 726 GRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYE 771
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 146/326 (44%), Gaps = 20/326 (6%)
Query: 98 ERNCFVWSSMVSGYCKKGSVAEAETIF-----GRIPVRSLEIWNTMIAGYVQNGFGERAL 152
E + ++ +++G V AE +F GRI + +NTMI GY + G ++A+
Sbjct: 219 EPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKP-DIVTYNTMIKGYCKAGQTQKAM 277
Query: 153 QAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMY 212
+ +M G E D+ T ++++ AC + ++ ++ K + V P S ++
Sbjct: 278 EKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGL 337
Query: 213 AKCGDLVNARLVFEGFTQR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDA 268
K G L VFE ++ N+ + +I G+A +G + + RM + +PD
Sbjct: 338 CKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDV 397
Query: 269 ITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKR 328
+T+ V++ G + EAL+ + + Y ++D LG+AGR+ EA L +
Sbjct: 398 VTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEE 457
Query: 329 MPME---PNETVLGAMLGACRTHSDMKMAEQVIKLI----GTNSITRADSHNVLLSNIYA 381
M + + A++ A H + A + K + G + ++ +LLS ++
Sbjct: 458 MSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVY--TYTILLSGMF- 514
Query: 382 ASEKWEKAEKMRGIMVDGESEKIAGC 407
+ E+A K+ +M+D A C
Sbjct: 515 KEHRNEEALKLWDMMIDKGITPTAAC 540
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 162/382 (42%), Gaps = 65/382 (17%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEM-PGKTG---VTWSQMIGGFARNGDTATAR- 57
E + T+N +++G + ++SA VFE M G+ VT++ MI G+ + G T A
Sbjct: 219 EPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAME 278
Query: 58 --RLFDEAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCFV----WSSMVSGY 111
R + HE +T+ M+ + + +++ M E+ V +S ++ G
Sbjct: 279 KLRDMETRGHEADK-ITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGL 337
Query: 112 CKKGSVAEAETIF------GRIPVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEP 165
CK+G + E T+F G P ++ I+ +I GY ++G E A++ M EGF+P
Sbjct: 338 CKEGKLNEGYTVFENMIRKGSKP--NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKP 395
Query: 166 DEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVF 225
D T V++ + G ++ H L +N S L+D K G + A +F
Sbjct: 396 DVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLF 455
Query: 226 EGFTQ----RNICCWNAMISGFAINGKCREVLEFFGRME--------------------- 260
E ++ R+ C+NA+I F + K E + F RME
Sbjct: 456 EEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFK 515
Query: 261 ---------------NLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKH 305
+ I P A F + + G ++ A +++ ++ + I
Sbjct: 516 EHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGV---ILD 572
Query: 306 YGC--MVDLLGRAGRLKEAYDL 325
C M++ L +AGR+KEA L
Sbjct: 573 AACEDMINTLCKAGRIKEACKL 594
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 149/340 (43%), Gaps = 50/340 (14%)
Query: 39 TWSQMIGGFARNGDTATARRLFDEAPHE--LKGVVTWTVMVDGYARKGEMEAAREVFELM 96
T++ +I AR L + + + V+T+ +++GY ++G +E A +V ELM
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 97 PER----NCFVWSSMVSGYCKKGSVAEAETIFGRIPVR----SLEIWNTMIAGYVQNGFG 148
R N ++ ++ GYCK +V +A + ++ R + +N++I G ++G
Sbjct: 420 ESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 149 ERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGL 208
+ A + M G PD++T S++ + + ++ + +E K + N + + L
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 209 VDMYAKCGDLVNARLVFEGFTQRNI----CCWNAMISGFAINGKCRE--VLE-------- 254
+D Y K G + A L+ E +N +NA+I G +GK +E +LE
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Query: 255 -------------------------FFGRMENLNIRPDAITFLTVLSACAHGGLLSEALE 289
F +M + +PDA T+ T + G L +A +
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658
Query: 290 VISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM 329
+++KM + + Y ++ G G+ A+D++KRM
Sbjct: 659 MMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 159/380 (41%), Gaps = 54/380 (14%)
Query: 3 ERNVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARR 58
+ + T+ ++I GY + D++SA VF EMP K V ++ +I G A
Sbjct: 250 DPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMD 309
Query: 59 LF----------------------------DEAPHELK---------GVVTWTVMVDGYA 81
LF EA + +K + T+TV++D
Sbjct: 310 LFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLC 369
Query: 82 RKGEMEAAREVFELMPER----NCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSL----E 133
+ + E ARE+ M E+ N ++++++GYCK+G + +A + + R L
Sbjct: 370 SQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTR 429
Query: 134 IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMI 193
+N +I GY ++ +A+ +M PD T S++ + G D+ ++ ++
Sbjct: 430 TYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM 488
Query: 194 EHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQR----NICCWNAMISGFAINGKC 249
+ L + + + ++D K + A +F+ Q+ N+ + A+I G+ GK
Sbjct: 489 NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKV 548
Query: 250 REVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCM 309
E +M + N P+++TF ++ G L EA + KM ++ + +
Sbjct: 549 DEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTIL 608
Query: 310 VDLLGRAGRLKEAYDLIKRM 329
+ L + G AY ++M
Sbjct: 609 IHRLLKDGDFDHAYSRFQQM 628
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/378 (20%), Positives = 171/378 (45%), Gaps = 30/378 (7%)
Query: 5 NVVTWNAMISGYMRNGDMESA----SLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
N+ T+N M++GY + G++E A S + E T++ +I G+ + D +A ++F
Sbjct: 217 NIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVF 276
Query: 61 DEAPHELKGV----VTWTVMVDGYARKGEMEAAREVFELMPERNCF----VWSSMVSGYC 112
+E P LKG V +T ++ G ++ A ++F M + CF ++ ++ C
Sbjct: 277 NEMP--LKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLC 334
Query: 113 KKGSVAEAETIFGRIP----VRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEF 168
+EA + + ++ + +I E+A + +M +G P+
Sbjct: 335 GSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVI 394
Query: 169 TVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF 228
T ++++ + G+++ + ++E ++L+ N + L+ Y K ++ A V
Sbjct: 395 TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKM 453
Query: 229 TQR----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLL 284
+R ++ +N++I G +G M + + PD T+ +++ + +
Sbjct: 454 LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRV 513
Query: 285 SEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPME---PNETVLGAM 341
EA ++ +E + + Y ++D +AG++ EA+ ++++M + PN A+
Sbjct: 514 EEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL 573
Query: 342 L-GACRTHSDMKMAEQVI 358
+ G C +D K+ E +
Sbjct: 574 IHGLC---ADGKLKEATL 588
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 113/252 (44%), Gaps = 16/252 (6%)
Query: 73 WTVMVDGYARKGEMEAAREVF-ELMPERNC---FVWSSMVSGYCKKGSVAEAETIFGRIP 128
+ +++ AR G ++ ++V+ E++ ++ C + ++ MV+GYCK G+V EA +I
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 129 VRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLD 184
L+ + ++I GY Q + A + F EM +G +E ++ +D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 185 AGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGD------LVNARLVFEGFTQRNICCWNA 238
+ ++ K P V + V + + CG L + + E + NI +
Sbjct: 306 EAMDL--FVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 239 MISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYA 298
+I K + E G+M + P+ IT+ +++ G++ +A++V+ ME+
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 299 IEMGIKHYGCMV 310
+ + Y ++
Sbjct: 424 LSPNTRTYNELI 435
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 99/220 (45%), Gaps = 8/220 (3%)
Query: 135 WNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIE 194
+NT++ + G + Q + EM + P+ +T +++ +LG ++ Q I
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 195 HKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFT----QRNICCWNAMISGFAINGKCR 250
L + F + L+ Y + DL +A VF +RN + +I G + +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 251 EVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMV 310
E ++ F +M++ P T+ ++ + SEAL ++ +ME I+ I Y ++
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 311 DLLGRAGRLKEAYDLIKRMP---MEPNETVLGAML-GACR 346
D L + ++A +L+ +M + PN A++ G C+
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCK 405
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 148/326 (45%), Gaps = 36/326 (11%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMP--GKTG--VTWSQMIGGFARNGDTATARRLF 60
+V T+ M+ + + G +E A F EM G T VT++ +I + + + A LF
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576
Query: 61 DEAPHE--LKGVVTWTVMVDGYARKGEMEAAREVFELM-------------------PER 99
+ E L +VT++ ++DG+ + G++E A ++FE M ER
Sbjct: 577 ETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER 636
Query: 100 -NCFVWSSMVSGYCKKGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQA 154
N + +++ G+CK V EA + + + E +++ +I G + G + A +
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 155 FEEMRAEGFEPDEFTVVSVLSACAQLGLLD-AGKQIHHMIEHKRLTVNPFVLSGLVDMYA 213
EM GF +T S++ ++ D A K + M+E+ N + + ++D
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS-CAPNVVIYTEMIDGLC 755
Query: 214 KCGDLVNA----RLVFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAI 269
K G A +++ E Q N+ + AMI GF + GK LE RM + + P+ +
Sbjct: 756 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYV 815
Query: 270 TFLTVLSACAHGGLLSEALEVISKME 295
T+ ++ C G L A ++ +M+
Sbjct: 816 TYRVLIDHCCKNGALDVAHNLLEEMK 841
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 159/391 (40%), Gaps = 76/391 (19%)
Query: 8 TWNAMISGYMRNGDMESASLVFEEMPGKTG------VTWSQMIGGFARNGDTATARRLFD 61
T++ +++ ME A L+FEEM K G T++ M+ F + G AR+ F+
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEM--KRGGLVADVYTYTIMVDSFCKAGLIEQARKWFN 542
Query: 62 EAPHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCF----VWSSMVSGYCKKG 115
E VVT+T ++ Y + ++ A E+FE M C +S+++ G+CK G
Sbjct: 543 EMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAG 602
Query: 116 SVAEAETIFGRI----PVRSLEIW-----------NTMIAGYVQNGFG-----ERALQAF 155
V +A IF R+ V ++++ N + G + +GF E A +
Sbjct: 603 QVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLL 662
Query: 156 EEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKC 215
+ M EG EP++ +++ ++G LD +++ + + S L+D Y K
Sbjct: 663 DAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKV 722
Query: 216 G--DLVNARL--VFEGFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITF 271
DL + L + E N+ + MI G GK E + ME +P+ +T
Sbjct: 723 KRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVT- 781
Query: 272 LTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM-- 329
Y M+D G G+++ +L++RM
Sbjct: 782 ----------------------------------YTAMIDGFGMIGKIETCLELLERMGS 807
Query: 330 -PMEPNETVLGAMLGACRTHSDMKMAEQVIK 359
+ PN ++ C + + +A +++
Sbjct: 808 KGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 838
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/458 (19%), Positives = 168/458 (36%), Gaps = 117/458 (25%)
Query: 2 PERNVVTWNAMISGYMRNGDMESASLVFEEMP---------------------GK----- 35
P R+ T+N +I +++ ++SASL+ EM GK
Sbjct: 233 PSRS--TYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREAL 290
Query: 36 ----------TGVTWSQMIGGFARNGDTATARRLFD--EAPHELKGVVTWTVMVDGYARK 83
V ++++I G A + A L VVT++ ++ G K
Sbjct: 291 TLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNK 350
Query: 84 GEMEAAREVFELMPERNCF----VWSSMVSGYCKKGSVAEAETIF------GRIPVRSLE 133
++ + V +M C+ +++S+V YC G + A + G +P
Sbjct: 351 KQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMP--GYV 408
Query: 134 IWNTMI---------------------------AGYVQN--------------GFGERAL 152
++N +I AG V N G E+A
Sbjct: 409 VYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAF 468
Query: 153 QAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMY 212
EM +GF PD T VL+ ++ + ++ L + + + +VD +
Sbjct: 469 SVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 528
Query: 213 AKCGDLVNARLVFEGFTQ----RNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDA 268
K G + AR F + N+ + A+I + K E F M + P+
Sbjct: 529 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 588
Query: 269 ITFLTVLSACAHGGLLSEALEVISKM----EAYAIEMGIKH------------YGCMVDL 312
+T+ ++ G + +A ++ +M + ++M K YG ++D
Sbjct: 589 VTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDG 648
Query: 313 LGRAGRLKEAYDLIKRMPM---EPNETVLGAML-GACR 346
++ R++EA L+ M M EPN+ V A++ G C+
Sbjct: 649 FCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 686
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 97/257 (37%), Gaps = 22/257 (8%)
Query: 133 EIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTVVSVLSACAQLGLLDAGKQIHHM 192
E N ++ + +NG AL+ ++ F P T ++ A + LD+ IH
Sbjct: 201 EFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHRE 260
Query: 193 IEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFE--GFTQRNICCWNAMISGFAINGKCR 250
+ L ++ F L K G A + E F + + +ISG
Sbjct: 261 MSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVF-YTKLISGLCEASLFE 319
Query: 251 EVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGCMV 310
E ++F RM + P+ +T+ T+L C + L V++ M K + +V
Sbjct: 320 EAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 379
Query: 311 DLLGRAGRLKEAYDLIKRMPM---EPNETVLGAMLGAC----------------RTHSDM 351
+G AY L+K+M P V ++G+ + +S+M
Sbjct: 380 HAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEM 439
Query: 352 KMAEQVIKLIGTNSITR 368
A V+ I +S TR
Sbjct: 440 LAAGVVLNKINVSSFTR 456
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 165/402 (41%), Gaps = 60/402 (14%)
Query: 4 RNVVTWNAMISGYMRNGDMESASLVFEEM----PGKTGVTWSQMIGGFARNGDTATARRL 59
N+ T++ I+ + R + A + +M G + VT + ++ GF + A L
Sbjct: 108 HNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 167
Query: 60 FDEAPH--ELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNC----FVWSSMVSGYCK 113
D+ VT+T +V G + + A + E M + C + ++++G CK
Sbjct: 168 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 227
Query: 114 KGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFT 169
+G A + ++ +E I+NT+I G + + A F +M +G +PD FT
Sbjct: 228 RGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 287
Query: 170 VVSVLSACAQLGL-LDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF 228
++S G DA + + M+E K + + + L+D + K G LV A +++
Sbjct: 288 YNPLISCLCNYGRWSDASRLLSDMLE-KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346
Query: 229 TQRNIC-----CWNAMISGFAINGKCREVLEFFGRMENL--------------------- 262
+ C +N +I GF + E +E F M
Sbjct: 347 VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 263 --------------NIRPDAITFLTVLSACAHGGLLSEALEVISKMEAYAIEMGIKHYGC 308
+ PD +T+ +L + G + AL V M+ +++ I Y
Sbjct: 407 CDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTT 466
Query: 309 MVDLLGRAGRLKEAYDLIKRMPM---EPNETVLGAML-GACR 346
M++ L +AG++++ +DL + + +PN M+ G CR
Sbjct: 467 MIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 508
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 94/186 (50%), Gaps = 14/186 (7%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGK----TGVTWSQMIGGFARNGDTATARRLF 60
+VV +N +I G+ + +E VF EM + VT++ +I GF + D A+ +F
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 61 DEAPHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPERN----CFVWSSMVSGYCKK 114
+ + ++T+ +++DG G +E A VFE M +R+ +++M+ CK
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Query: 115 GSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
G V + +F + ++ ++ + TM++G+ + G E A F EM+ +G P+ T
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTY 534
Query: 171 VSVLSA 176
+++ A
Sbjct: 535 NTLIRA 540
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 98/180 (54%), Gaps = 16/180 (8%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKTGV-----TWSQMIGGFARNGDTATARRL 59
N VT+ +I G+ + D ++A +VF++M GV T++ ++ G NG+ TA +
Sbjct: 390 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSD-GVHPDIMTYNILLDGLCNNGNVETALVV 448
Query: 60 FDE-APHELK-GVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCK 113
F+ ++K +VT+T M++ + G++E ++F + + N +++M+SG+C+
Sbjct: 449 FEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 508
Query: 114 KGSVAEAETIFGRI----PVRSLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFT 169
KG EA+ +F + P+ + +NT+I +++G + + +EMR+ GF D T
Sbjct: 509 KGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDAST 568
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 166/364 (45%), Gaps = 24/364 (6%)
Query: 3 ERNVVTWNAMISGYMRNGDMESA-SLVFE--EMPGKTGVT-WSQMIGGFARNGDTATARR 58
E ++VT+ ++I+G+ ME A S+V + EM K V ++ +I +NG A
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 59 LFDEAPHE--LKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYC 112
LFD+ + VV +T +V+G G A + M +R + +++++ +
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 113 KKGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEF 168
K+G +AE ++ + S+ + ++I G+ G + A Q F M +G PD
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 169 TVVSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGF 228
S+++ + +D +I + + K LT N + L+ + + G A+ VF
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 229 TQR----NICCWNAMISGFAINGKCREVLEFFGRMENLN---IRPDAITFLTVLSACAHG 281
R NI +N ++ NGK ++ L F M+ + P+ T+ +L +
Sbjct: 379 VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYN 438
Query: 282 GLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMP---MEPNETVL 338
G L +AL V M +++GI Y ++ + +AG++K A +L +P ++PN
Sbjct: 439 GKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTY 498
Query: 339 GAML 342
M+
Sbjct: 499 TTMI 502
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 147/316 (46%), Gaps = 29/316 (9%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPGKT----GVTWSQMIGGFARNGDTATARRLF 60
+VV + ++++G +G A + M + +T++ +I F + G A L+
Sbjct: 211 DVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELY 270
Query: 61 DE------APHELKGVVTWTVMVDGYARKGEMEAAREVFELMPERNCF----VWSSMVSG 110
+E AP+ + T+T +++G+ +G ++ AR++F LM + CF ++S+++G
Sbjct: 271 NEMIRMSIAPN----IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLING 326
Query: 111 YCKKGSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPD 166
+CK V +A IF + + L + T+I G+ Q G A + F M + G P+
Sbjct: 327 FCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPN 386
Query: 167 EFTVVSVLSACAQLGLLDAGKQIHHMIEHKRLT-VNPFVLSGLVDMYAKC--GDLVNARL 223
T +L G + I ++ + + V P + + V ++ C G L A +
Sbjct: 387 IRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALM 446
Query: 224 VFEGFTQRNI----CCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACA 279
VFE +R + + +I G GK + + F + + ++P+ +T+ T++S
Sbjct: 447 VFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLF 506
Query: 280 HGGLLSEALEVISKME 295
GL EA + KM+
Sbjct: 507 REGLKHEAHVLFRKMK 522
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 158/349 (45%), Gaps = 27/349 (7%)
Query: 5 NVVTWNAMISGYMRNGDMESASLVFEEMPG----KTGVTWSQMIGGFARNGDTATARRLF 60
+VV + +I +NG + A +F++M V ++ ++ G +G A L
Sbjct: 176 DVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLL 235
Query: 61 D-EAPHELK-GVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKK 114
++K V+T+ ++D + ++G+ A E++ M N F ++S+++G+C +
Sbjct: 236 RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCME 295
Query: 115 GSVAEAETIFGRIPVR----SLEIWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
G V EA +F + + + + ++I G+ + + A++ F EM +G + T
Sbjct: 296 GCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITY 355
Query: 171 VSVLSACAQLGLLDAGKQIH-HMIEHKRLTVNPFVLSGLVDMYAKC--GDLVNARLVFEG 227
+++ Q+G + +++ HM+ V P + + V ++ C G + A ++FE
Sbjct: 356 TTLIQGFGQVGKPNVAQEVFSHMVSR---GVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412
Query: 228 FTQR-------NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAH 280
+R NI +N ++ G NGK + L F M + IT+ ++
Sbjct: 413 MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCK 472
Query: 281 GGLLSEALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM 329
G + A+ + + + ++ + Y M+ L R G EA+ L ++M
Sbjct: 473 AGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Query: 227 GFTQRNICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSE 286
GF + +I + ++I+GF + + E + +M + I+PD + + T++ + G ++
Sbjct: 137 GF-EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNY 195
Query: 287 ALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRM---PMEPNETVLGAMLG 343
AL + +ME Y I + Y +V+ L +GR ++A L++ M ++P+ A++
Sbjct: 196 ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255
Query: 344 A 344
A
Sbjct: 256 A 256
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 159/364 (43%), Gaps = 22/364 (6%)
Query: 5 NVVTWNAMISG-YMRNGDMESASLV---FEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
+ +T+ +I G ++ N E+ +LV + VT+ ++ G + GD A L
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 248
Query: 61 D--EAPHELKGVVTWTVMVDGYARKGEMEAAREVFELMPER----NCFVWSSMVSGYCKK 114
+ EA VV ++ ++D + + A +F M + N +SS++S C
Sbjct: 249 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 308
Query: 115 GSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
++A + + R + +N +I +V+ G A + ++EM +PD FT
Sbjct: 309 ERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 368
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ 230
S+++ LD K + ++ K N + L++ + K + +F +Q
Sbjct: 369 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQ 428
Query: 231 R----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAITFLTVLSACAHGGLLSE 286
R N + +I GF C F +M + + P+ +T+ T+L G L +
Sbjct: 429 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 488
Query: 287 ALEVISKMEAYAIEMGIKHYGCMVDLLGRAGRLKEAYDLIKRMPM---EPNETVLGAML- 342
A+ V ++ +E I Y M++ + +AG++++ +DL + + +P+ + M+
Sbjct: 489 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMIS 548
Query: 343 GACR 346
G CR
Sbjct: 549 GFCR 552
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 132/284 (46%), Gaps = 18/284 (6%)
Query: 5 NVVTWNAMIS---GYMRNGDMESA-SLVFEEMPGKTGVTWSQMIGGFARNGDTATARRLF 60
NV+T++++IS Y R D S + E VT++ +I F + G A +L+
Sbjct: 294 NVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLY 353
Query: 61 DEAPHEL--KGVVTWTVMVDGYARKGEMEAAREVFELMPERNCF----VWSSMVSGYCKK 114
DE + T++ +++G+ ++ A+ +FELM ++CF ++++++G+CK
Sbjct: 354 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKA 413
Query: 115 GSVAEAETIFGRIPVRSLE----IWNTMIAGYVQNGFGERALQAFEEMRAEGFEPDEFTV 170
+ E +F + R L + T+I G+ Q + A F++M ++G P+ T
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTY 473
Query: 171 VSVLSACAQLGLLDAGKQIHHMIEHKRLTVNPFVLSGLVDMYAKCGDLVNARLVFEGFTQ 230
++L + G L+ + ++ ++ + + +++ K G + + +F +
Sbjct: 474 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 533
Query: 231 R----NICCWNAMISGFAINGKCREVLEFFGRMENLNIRPDAIT 270
+ ++ +N MISGF G E F +M PD+ T
Sbjct: 534 KGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577