Miyakogusa Predicted Gene

Lj0g3v0157249.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0157249.1 Non Chatacterized Hit- tr|Q9C662|Q9C662_ARATH
Putative uncharacterized protein F28B23.15
OS=Arabidop,57.61,4e-19,IMPORTIN 9 (IMP9) (RAN-BINDING PROTEIN
9),NULL; IMPORTIN-7, 8, 11,NULL,CUFF.9730.1
         (93 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G26170.1 | Symbols:  | ARM repeat superfamily protein | chr1:...   142   4e-35

>AT1G26170.1 | Symbols:  | ARM repeat superfamily protein |
           chr1:9047539-9054438 REVERSE LENGTH=1022
          Length = 1022

 Score =  142 bits (359), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 69/93 (74%), Positives = 82/93 (88%)

Query: 1   MRSLLDVASRLLDPNLESSGSLFVGSYILQLILHLPSHMAIHIRDLVAALVRRMQSAQIA 60
           MRSLLD  SRLL+P+LE SGSLF G YILQLILHLPS MA H++DLVAALVRR+QSA+I 
Sbjct: 723 MRSLLDATSRLLNPDLEGSGSLFAGKYILQLILHLPSEMAPHVQDLVAALVRRLQSAEIL 782

Query: 61  SLRSSLLVVFARLVHLSVPNVGQFIDLLISIPA 93
           +L+ SLL++FARLVH+S PNV QFI+LL+SIPA
Sbjct: 783 ALKGSLLLIFARLVHMSYPNVDQFINLLVSIPA 815