Miyakogusa Predicted Gene

Lj0g3v0156919.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0156919.1 tr|F2SIS2|F2SIS2_TRIRC Syntaxin 5 OS=Trichophyton
rubrum (strain ATCC MYA-4607 / CBS 118892) GN=TERG,37.08,1e-18,no
description,NULL; SYNTAXIN 5,NULL; SYNTAXIN,NULL; t-snare
proteins,t-SNARE; Syntaxin,Syntaxin, N-,CUFF.9692.1
         (174 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G05760.1 | Symbols: SYP31, ATSED5, ATSYP31, SED5 | syntaxin o...   228   2e-60
AT3G24350.1 | Symbols: SYP32, ATSYP32 | syntaxin of plants  32 |...   168   2e-42
AT3G24350.2 | Symbols: SYP32 | syntaxin of plants  32 | chr3:883...   157   3e-39

>AT5G05760.1 | Symbols: SYP31, ATSED5, ATSYP31, SED5 | syntaxin of
           plants 31 | chr5:1729111-1730903 REVERSE LENGTH=336
          Length = 336

 Score =  228 bits (581), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 116/169 (68%), Positives = 139/169 (82%), Gaps = 2/169 (1%)

Query: 1   MASTYRDRTSEFRSLTETLKKIGGATAPRNQPENAPATSQASSYSRSEFNRKASRIGLGI 60
           M ST+RDRT E  SL++TLKKIG A    +Q E+ PA+S+ SS   SEFN+KASRIGLGI
Sbjct: 1   MGSTFRDRTVELHSLSQTLKKIG-AIPSVHQDEDDPASSKRSSPG-SEFNKKASRIGLGI 58

Query: 61  HETSQKIARLAQLAKKSSMFNDPMVEIQELTGLIKNDITALNSALSDLQNIQQMDMAEGN 120
            ETSQKI RLA+LAK+S++FND  VEIQELT LI+NDIT LN ALSDLQ +Q M++A+GN
Sbjct: 59  KETSQKITRLAKLAKQSTIFNDRTVEIQELTVLIRNDITGLNMALSDLQTLQNMELADGN 118

Query: 121 YSEDRSVHSTAVCDDLKGRLMGATKHLQDVLTARTENIKAHENRRQIFS 169
           YS+D+  H TAVCDDLK RLMGATK LQDVLT R+EN+KAHENR+Q+FS
Sbjct: 119 YSQDQVGHYTAVCDDLKTRLMGATKQLQDVLTTRSENMKAHENRKQLFS 167


>AT3G24350.1 | Symbols: SYP32, ATSYP32 | syntaxin of plants  32 |
           chr3:8837733-8839402 FORWARD LENGTH=347
          Length = 347

 Score =  168 bits (426), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 93/178 (52%), Positives = 122/178 (68%), Gaps = 6/178 (3%)

Query: 3   STYRDRTSEFRSLTETLKK-IGGATAPRNQPENAPATSQA---SSYSRSEFNRKASRIGL 58
           S+YRDR+ EF  + ETL++ I  A A  N P        A      ++SEFN++AS IGL
Sbjct: 8   SSYRDRSDEFFKIVETLRRSIAPAPAANNVPYGNNRNDGARREDLINKSEFNKRASHIGL 67

Query: 59  GIHETSQKIARLAQLAKKSSMFNDPMVEIQELTGLIKNDITALNSALSDLQNIQQMDMAE 118
            I++TSQK+++LA+LAK++S+F+DP  EIQELT +IK +I+ALNSAL DLQ  +     E
Sbjct: 68  AINQTSQKLSKLAKLAKRTSVFDDPTQEIQELTVVIKQEISALNSALVDLQLFRSSQNDE 127

Query: 119 GNYSEDR--SVHSTAVCDDLKGRLMGATKHLQDVLTARTENIKAHENRRQIFSKTAAR 174
           GN S DR  S HS  V DDLK RLM  TK  +DVLT RTEN+K HE+RRQ+FS  A++
Sbjct: 128 GNNSRDRDKSTHSATVVDDLKYRLMDTTKEFKDVLTMRTENMKVHESRRQLFSSNASK 185


>AT3G24350.2 | Symbols: SYP32 | syntaxin of plants  32 |
           chr3:8837733-8839402 FORWARD LENGTH=361
          Length = 361

 Score =  157 bits (397), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 92/192 (47%), Positives = 122/192 (63%), Gaps = 20/192 (10%)

Query: 3   STYRDRTSEFRSLTETLKK-IGGATAPRNQPENAPATSQASS---YSRSEFNRKASRIGL 58
           S+YRDR+ EF  + ETL++ I  A A  N P        A      ++SEFN++AS IGL
Sbjct: 8   SSYRDRSDEFFKIVETLRRSIAPAPAANNVPYGNNRNDGARREDLINKSEFNKRASHIGL 67

Query: 59  GIHETSQKIARLAQ--------------LAKKSSMFNDPMVEIQELTGLIKNDITALNSA 104
            I++TSQK+++LA+              +AK++S+F+DP  EIQELT +IK +I+ALNSA
Sbjct: 68  AINQTSQKLSKLAKRIRMVLRSRTDLFSVAKRTSVFDDPTQEIQELTVVIKQEISALNSA 127

Query: 105 LSDLQNIQQMDMAEGNYSEDR--SVHSTAVCDDLKGRLMGATKHLQDVLTARTENIKAHE 162
           L DLQ  +     EGN S DR  S HS  V DDLK RLM  TK  +DVLT RTEN+K HE
Sbjct: 128 LVDLQLFRSSQNDEGNNSRDRDKSTHSATVVDDLKYRLMDTTKEFKDVLTMRTENMKVHE 187

Query: 163 NRRQIFSKTAAR 174
           +RRQ+FS  A++
Sbjct: 188 SRRQLFSSNASK 199