Miyakogusa Predicted Gene

Lj0g3v0156549.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0156549.1 Non Chatacterized Hit- tr|K4A4M1|K4A4M1_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si033825,27.99,9e-19,seg,NULL; PUTATIVE UNCHARACTERIZED
PROTEIN,NULL; VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN
(VPS13),CUFF.9674.1
         (274 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G48090.1 | Symbols:  | calcium-dependent lipid-binding family...   289   1e-78
AT4G17140.3 | Symbols:  | pleckstrin homology (PH) domain-contai...   103   1e-22
AT4G17140.2 | Symbols:  | pleckstrin homology (PH) domain-contai...   103   1e-22
AT4G17140.1 | Symbols:  | pleckstrin homology (PH) domain-contai...   103   1e-22

>AT1G48090.1 | Symbols:  | calcium-dependent lipid-binding family
            protein | chr1:17732582-17758194 REVERSE LENGTH=4146
          Length = 4146

 Score =  289 bits (740), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 153/277 (55%), Positives = 198/277 (71%), Gaps = 7/277 (2%)

Query: 2    KLHSLKIKDELQGRLSVAPSYLAVSVLKNETLXXXXXXXXXHGKDMSLGLPDDDDSFMDA 61
            KLHSLKIKDELQ + S +  YLA SVLKNE +           K+M +G  DD+D++ DA
Sbjct: 1071 KLHSLKIKDELQQQQSGSAQYLAYSVLKNEDIQESLGTCDSFDKEMPVGHADDEDAYTDA 1130

Query: 62   LSEFMSQTDVGYLHNMDLDQQGLMGIASDFESLENL---IHEKEIEKGKGTPREVYYEAE 118
            L EF+S T+ G   +MD+ Q  +M  + +   LE+     HEK+  +GK    EV+YE +
Sbjct: 1131 LPEFLSPTEPG-TPDMDMIQCSMMMDSDEHVGLEDTEGGFHEKDTSQGKSLCDEVFYEVQ 1189

Query: 119  GSDTSNFVSLSFSTRSSGSPDYNGIDTQMCVRMSKLEFFCNRPTIVALISFGLDISSGNK 178
            G + S+FVS+ F TRSS S DYNGIDTQM +RMSKLEFFC+RPT+VALI FG D+S+ + 
Sbjct: 1190 GGEFSDFVSVVFLTRSSSSHDYNGIDTQMSIRMSKLEFFCSRPTVVALIGFGFDLSTASY 1249

Query: 179  MTSHTSETS--PERP-SVKERTDEKGRVKGLLGFGKERVVFYLNMNVDSVTIFLNKEDDS 235
            + +     +  PE+  S KE  DE GR++GLLG+GK+RVVFYLNMNVD+VT+FLNKED S
Sbjct: 1250 IENDKDANTLVPEKSDSEKETNDESGRIEGLLGYGKDRVVFYLNMNVDNVTVFLNKEDGS 1309

Query: 236  QLAKLVQESFLMDLKVHPSSLSIDGTLGNFRLCDTSL 272
            QLA  VQE F++D+KVHPSSLS++GTLGNF+LCD SL
Sbjct: 1310 QLAMFVQERFVLDIKVHPSSLSVEGTLGNFKLCDKSL 1346


>AT4G17140.3 | Symbols:  | pleckstrin homology (PH) domain-containing
            protein | chr4:9613617-9636618 REVERSE LENGTH=4219
          Length = 4219

 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/155 (38%), Positives = 84/155 (54%), Gaps = 6/155 (3%)

Query: 124  NFVSLSFSTRSSGSPDYNGIDTQMCVRMSKLEFFCNRPTIVALISFGLDISSGNKMTSHT 183
            +FV          SP Y  ID Q+ V ++ L FFC RPTI+A++ F   I+  +      
Sbjct: 1109 SFVKAQIVIYHQTSPQYKNIDNQVMVTLATLSFFCRRPTILAILEFVNAINVEDPSCESF 1168

Query: 184  SETSP---ERPSVKERTDEKGR---VKGLLGFGKERVVFYLNMNVDSVTIFLNKEDDSQL 237
             + SP   E  S +    E  R   VKGLLG GK R++F L +N+    IFL  E+ ++ 
Sbjct: 1169 EDNSPVAGEHTSPRRDGFEDSRDAAVKGLLGKGKSRIIFNLELNMARAQIFLMNENGTKF 1228

Query: 238  AKLVQESFLMDLKVHPSSLSIDGTLGNFRLCDTSL 272
            A L Q++ L D+KV P+S SI  +LGN R+ D SL
Sbjct: 1229 ATLSQDNLLTDIKVFPNSFSIKASLGNLRISDDSL 1263


>AT4G17140.2 | Symbols:  | pleckstrin homology (PH) domain-containing
            protein | chr4:9613617-9636618 REVERSE LENGTH=4218
          Length = 4218

 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/155 (38%), Positives = 84/155 (54%), Gaps = 6/155 (3%)

Query: 124  NFVSLSFSTRSSGSPDYNGIDTQMCVRMSKLEFFCNRPTIVALISFGLDISSGNKMTSHT 183
            +FV          SP Y  ID Q+ V ++ L FFC RPTI+A++ F   I+  +      
Sbjct: 1102 SFVKAQIVIYHQTSPQYKNIDNQVMVTLATLSFFCRRPTILAILEFVNAINVEDPSCESF 1161

Query: 184  SETSP---ERPSVKERTDEKGR---VKGLLGFGKERVVFYLNMNVDSVTIFLNKEDDSQL 237
             + SP   E  S +    E  R   VKGLLG GK R++F L +N+    IFL  E+ ++ 
Sbjct: 1162 EDNSPVAGEHTSPRRDGFEDSRDAAVKGLLGKGKSRIIFNLELNMARAQIFLMNENGTKF 1221

Query: 238  AKLVQESFLMDLKVHPSSLSIDGTLGNFRLCDTSL 272
            A L Q++ L D+KV P+S SI  +LGN R+ D SL
Sbjct: 1222 ATLSQDNLLTDIKVFPNSFSIKASLGNLRISDDSL 1256


>AT4G17140.1 | Symbols:  | pleckstrin homology (PH) domain-containing
            protein | chr4:9613617-9636618 REVERSE LENGTH=4216
          Length = 4216

 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/155 (38%), Positives = 84/155 (54%), Gaps = 6/155 (3%)

Query: 124  NFVSLSFSTRSSGSPDYNGIDTQMCVRMSKLEFFCNRPTIVALISFGLDISSGNKMTSHT 183
            +FV          SP Y  ID Q+ V ++ L FFC RPTI+A++ F   I+  +      
Sbjct: 1112 SFVKAQIVIYHQTSPQYKNIDNQVMVTLATLSFFCRRPTILAILEFVNAINVEDPSCESF 1171

Query: 184  SETSP---ERPSVKERTDEKGR---VKGLLGFGKERVVFYLNMNVDSVTIFLNKEDDSQL 237
             + SP   E  S +    E  R   VKGLLG GK R++F L +N+    IFL  E+ ++ 
Sbjct: 1172 EDNSPVAGEHTSPRRDGFEDSRDAAVKGLLGKGKSRIIFNLELNMARAQIFLMNENGTKF 1231

Query: 238  AKLVQESFLMDLKVHPSSLSIDGTLGNFRLCDTSL 272
            A L Q++ L D+KV P+S SI  +LGN R+ D SL
Sbjct: 1232 ATLSQDNLLTDIKVFPNSFSIKASLGNLRISDDSL 1266