Miyakogusa Predicted Gene
- Lj0g3v0156319.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0156319.1 tr|D7MRE6|D7MRE6_ARALL Pentatricopeptide
repeat-containing protein OS=Arabidopsis lyrata subsp.
lyra,34.21,5e-19,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat;
PPR_2,P,CUFF.9654.1
(245 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 1e-43
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 4e-40
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 4e-36
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 147 5e-36
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 8e-36
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 3e-33
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 138 4e-33
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 8e-32
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 4e-31
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 130 5e-31
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 4e-29
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 2e-27
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 2e-25
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 2e-25
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 6e-25
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 2e-23
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 3e-23
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 3e-23
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 8e-23
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 1e-22
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 1e-22
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 3e-22
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 102 3e-22
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 5e-22
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 101 5e-22
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 5e-22
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 3e-21
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 4e-21
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 7e-21
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 97 8e-21
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 97 8e-21
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 9e-21
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 97 1e-20
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 96 2e-20
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 2e-20
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 96 3e-20
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 3e-20
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 4e-20
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 5e-20
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 5e-20
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 8e-20
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 93 1e-19
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 93 1e-19
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 2e-19
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-19
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-19
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 3e-19
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 92 3e-19
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 92 4e-19
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 5e-19
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 5e-19
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 7e-19
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 7e-19
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 8e-19
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 9e-19
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 9e-19
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 9e-19
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 9e-19
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 90 1e-18
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 1e-18
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 89 2e-18
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 2e-18
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 3e-18
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 3e-18
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 3e-18
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 3e-18
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 89 3e-18
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 3e-18
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 3e-18
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 6e-18
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 6e-18
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 7e-18
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 8e-18
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 8e-18
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 1e-17
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 1e-17
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 87 1e-17
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 1e-17
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 2e-17
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 2e-17
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 2e-17
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 3e-17
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 85 4e-17
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 4e-17
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 4e-17
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 5e-17
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 6e-17
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 6e-17
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 84 7e-17
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 7e-17
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 8e-17
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 8e-17
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 9e-17
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 1e-16
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 1e-16
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 1e-16
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 83 2e-16
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 2e-16
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 2e-16
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 2e-16
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 2e-16
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 82 2e-16
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 3e-16
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 3e-16
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 82 3e-16
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 3e-16
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 3e-16
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 4e-16
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 4e-16
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 4e-16
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 82 5e-16
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 6e-16
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 6e-16
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 81 6e-16
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 81 6e-16
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 7e-16
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 7e-16
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 7e-16
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 8e-16
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 8e-16
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 9e-16
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 9e-16
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 1e-15
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 1e-15
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 1e-15
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 1e-15
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 80 1e-15
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 1e-15
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 1e-15
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 2e-15
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 80 2e-15
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 2e-15
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 2e-15
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 2e-15
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 79 2e-15
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 2e-15
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 2e-15
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 3e-15
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 3e-15
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 4e-15
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 4e-15
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 4e-15
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 4e-15
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 5e-15
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 5e-15
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 5e-15
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 7e-15
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 77 7e-15
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 7e-15
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 7e-15
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 8e-15
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 8e-15
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 8e-15
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 77 1e-14
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 1e-14
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 2e-14
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 2e-14
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 2e-14
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 2e-14
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 2e-14
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 3e-14
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 3e-14
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 75 3e-14
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 3e-14
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 3e-14
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 4e-14
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 4e-14
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 4e-14
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 4e-14
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 4e-14
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 5e-14
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 6e-14
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 6e-14
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 7e-14
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 7e-14
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 7e-14
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 9e-14
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 9e-14
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 9e-14
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 73 2e-13
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 73 2e-13
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 73 2e-13
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 3e-13
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 3e-13
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 3e-13
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 3e-13
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 72 3e-13
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 72 3e-13
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 4e-13
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 5e-13
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 5e-13
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 6e-13
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 6e-13
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 7e-13
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 7e-13
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 9e-13
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 9e-13
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 1e-12
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 1e-12
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 1e-12
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 1e-12
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 1e-12
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 1e-12
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-12
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-12
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 3e-12
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 3e-12
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 3e-12
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 3e-12
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 3e-12
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 3e-12
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 5e-12
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 5e-12
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 6e-12
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 6e-12
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 7e-12
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 7e-12
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 7e-12
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 67 9e-12
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 67 9e-12
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 67 1e-11
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 66 2e-11
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 2e-11
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 66 3e-11
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 4e-11
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 5e-11
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 5e-11
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 5e-11
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 5e-11
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 5e-11
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 6e-11
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 6e-11
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 6e-11
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 6e-11
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 6e-11
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 7e-11
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 7e-11
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 8e-11
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 8e-11
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 9e-11
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 64 9e-11
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 9e-11
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 1e-10
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 63 2e-10
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 2e-10
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 3e-10
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 3e-10
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 6e-10
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 6e-10
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 6e-10
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 6e-10
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 7e-10
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 8e-10
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 9e-10
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 1e-09
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 60 1e-09
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-09
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-09
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-09
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 59 3e-09
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 4e-09
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 5e-09
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 6e-09
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 6e-09
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 6e-09
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 6e-09
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 6e-09
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 57 8e-09
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 57 1e-08
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 55 3e-08
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 4e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 4e-08
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 4e-08
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 55 4e-08
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 55 6e-08
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 6e-08
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 6e-08
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 8e-08
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 9e-08
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-07
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 6e-07
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 51 6e-07
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 7e-07
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 7e-07
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 7e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 51 8e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 9e-07
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 50 1e-06
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 49 4e-06
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 48 5e-06
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 7e-06
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 8e-06
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/165 (53%), Positives = 117/165 (70%), Gaps = 4/165 (2%)
Query: 81 MINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVST 140
+I K G I EARKLFD + ERD WT ++ GYI+ G ++EAR+LFD D+ K+V T
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 141 WSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER 200
W+ MV+GY++ Q+ AE LF EMPER VSWN M+ GY Q+G+I+KAL+LF M PER
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEM--PER 169
Query: 201 NVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
N+VSWN+++KALV+ GRI++A F +M RDV SWT +VD L
Sbjct: 170 NIVSWNSMVKALVQRGRIDEAMNLFERMP--RRDVVSWTAMVDGL 212
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 125/194 (64%), Gaps = 6/194 (3%)
Query: 50 FISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER-DTRL 108
I LCK G+ ARK+FD +PERD+ W +I GYIK G ++EAR+LFD++ R +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 109 WTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK 168
WT M++GY+ + A LF E++V +W+TM++GY + +I++A LF EMPER
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQ-EMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERN 170
Query: 169 DVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
VSWN M+ Q G+I++A++LF RM P R+VVSW ++ L + G++++A+ F+ M
Sbjct: 171 IVSWNSMVKALVQRGRIDEAMNLFERM--PRRDVVSWTAMVDGLAKNGKVDEARRLFDCM 228
Query: 229 QERERDVSSWTTIV 242
ER++ SW ++
Sbjct: 229 P--ERNIISWNAMI 240
Score = 147 bits (372), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 115/181 (63%), Gaps = 3/181 (1%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ I + GR D A ++FD+MPER++ W++M+ ++ G I EA LF++M RD
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVV 203
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
WT M++G + G + EAR+LFD E+++ +W+ M+ GY + N+I+EA++LF MPER
Sbjct: 204 SWTAMVDGLAKNGKVDEARRLFDCM-PERNIISWNAMITGYAQNNRIDEADQLFQVMPER 262
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQ 227
SWN M+ G+ +N ++ KA LF RM PE+NV+SW T+I V E+A F++
Sbjct: 263 DFASWNTMITGFIRNREMNKACGLFDRM--PEKNVISWTTMITGYVENKENEEALNVFSK 320
Query: 228 M 228
M
Sbjct: 321 M 321
Score = 144 bits (362), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 119/194 (61%), Gaps = 5/194 (2%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL 108
+ +S + + A +F +MPER++ W+TMI+GY + G I +A +LFD+M ER+
Sbjct: 114 AMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVS 173
Query: 109 WTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK 168
W +M+ ++ G I EA LF+ + V +W+ MV+G K +++EA RLF MPER
Sbjct: 174 WNSMVKALVQRGRIDEAMNLFERM-PRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERN 232
Query: 169 DVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
+SWN M+ GY QN +I++A LF+ M PER+ SWNT+I +R + A F++M
Sbjct: 233 IISWNAMITGYAQNNRIDEADQLFQVM--PERDFASWNTMITGFIRNREMNKACGLFDRM 290
Query: 229 QERERDVSSWTTIV 242
E++V SWTT++
Sbjct: 291 P--EKNVISWTTMI 302
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 41/222 (18%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL 108
+ + L K G+ D AR++FD MPER++ W+ MI GY + I EA +LF M ERD
Sbjct: 207 AMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFAS 266
Query: 109 WTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK 168
W TM+ G+I + +A LFD EK+V +W+TM+ GYV+ + EEA +F +M
Sbjct: 267 WNTMITGFIRNREMNKACGLFDRM-PEKNVISWTTMITGYVENKENEEALNVFSKMLRDG 325
Query: 169 DVSWNI----------------------------------------MMGGYGQNGQIEKA 188
V N+ ++ Y ++G++ A
Sbjct: 326 SVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAA 385
Query: 189 LDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
+F +R+++SWN++I G ++A +NQM++
Sbjct: 386 RKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRK 427
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 161 bits (407), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 139/212 (65%), Gaps = 11/212 (5%)
Query: 31 RTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGM 90
RT L ST +N C+ ISRL + G+ + ARK FD + + + W+++++GY G+
Sbjct: 10 RTYLTST-GVN-----CSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGL 63
Query: 91 IKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVK 150
KEAR+LFD+M+ER+ W +++GYI+ MI EAR +F+ E++V +W+ MV GY++
Sbjct: 64 PKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFE-LMPERNVVSWTAMVKGYMQ 122
Query: 151 INQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIK 210
+ EAE LF+ MPER +VSW +M GG +G+I+KA L+ M P ++VV+ +I
Sbjct: 123 EGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMM--PVKDVVASTNMIG 180
Query: 211 ALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
L R GR+++A+ F++M RER+V +WTT++
Sbjct: 181 GLCREGRVDEARLIFDEM--RERNVVTWTTMI 210
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 105/178 (58%), Gaps = 3/178 (1%)
Query: 54 LCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTML 113
L +GR D ARK++D MP +D+ MI G + G + EAR +FD+M ER+ WTTM+
Sbjct: 151 LIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMI 210
Query: 114 NGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWN 173
GY + + ARKLF+ EK+ +W++M+ GY +IE+AE F MP + ++ N
Sbjct: 211 TGYRQNNRVDVARKLFE-VMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACN 269
Query: 174 IMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER 231
M+ G+G+ G+I KA +F M +R+ +W +IKA R G +A F QMQ++
Sbjct: 270 AMIVGFGEVGEISKARRVFDLM--EDRDNATWRGMIKAYERKGFELEALDLFAQMQKQ 325
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 99/176 (56%), Gaps = 2/176 (1%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
+ I LC+EGR D AR +FD+M ER++ W TMI GY + + ARKLF+ M E+
Sbjct: 176 TNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEV 235
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
WT+ML GY G I++A + F+ K V + M+ G+ ++ +I +A R+F M +R
Sbjct: 236 SWTSMLLGYTLSGRIEDAEEFFEVMPM-KPVIACNAMIVGFGEVGEISKARRVFDLMEDR 294
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQW 223
+ +W M+ Y + G +ALDLF +M + + S+ ++I L C + Q+
Sbjct: 295 DNATWRGMIKAYERKGFELEALDLFAQM-QKQGVRPSFPSLISILSVCATLASLQY 349
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
CN+ I + G AR+VFD M +RD W MI Y + G EA LF QM ++
Sbjct: 268 CNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGV 327
Query: 107 R-LWTTMLNGYIECGMI------KEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
R + ++++ C + ++ + V S ++ YVK ++ +A+
Sbjct: 328 RPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKL 387
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIKALVRCGR 217
+F + + WN ++ GY +G E+AL +F MP N V+ I+ A G+
Sbjct: 388 VFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGK 447
Query: 218 IEDAQWHFNQMQER 231
+E+ F M+ +
Sbjct: 448 LEEGLEIFESMESK 461
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF 98
SL + + C + S + GR HA V Q + D+ + ++ Y+KCG + +A+ +F
Sbjct: 333 SLISILSVCATLAS--LQYGRQVHAHLVRCQFDD-DVYVASVLMTMYVKCGELVKAKLVF 389
Query: 99 DQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMV---NGYVKINQIE 155
D+ + +D +W ++++GY G+ +EA K+F + ++ T++ ++E
Sbjct: 390 DRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLE 449
Query: 156 EAERLFYEMPERKDVS-----WNIMMGGYGQNGQIEKALDLFRRMP-EPERNVVSWNTII 209
E +F M + V+ ++ + G+ GQ++KA++L M +P+ V W ++
Sbjct: 450 EGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATV--WGALL 507
Query: 210 KALVRCGRIEDAQWHFNQMQERERD 234
A R++ A+ ++ E E D
Sbjct: 508 GACKTHSRLDLAEVAAKKLFENEPD 532
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 147 bits (372), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 122/206 (59%), Gaps = 9/206 (4%)
Query: 23 LIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMI 82
+IHG + + F N E+ CN +SR R D AR+VF+Q+P + L+ MI
Sbjct: 20 VIHGKCYRSFSVTVEFQ-NREVLICNHLLSR-----RIDEAREVFNQVPSPHVSLYTKMI 73
Query: 83 NGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWS 142
GY + + +A LFD+M RD W +M++G +ECG + A KLFD E+SV +W+
Sbjct: 74 TGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFD-EMPERSVVSWT 132
Query: 143 TMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNV 202
MVNG + ++++AERLFY+MP + +WN M+ GY Q G+++ AL LF++M P +NV
Sbjct: 133 AMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQM--PGKNV 190
Query: 203 VSWNTIIKALVRCGRIEDAQWHFNQM 228
+SW T+I L + R +A F M
Sbjct: 191 ISWTTMICGLDQNERSGEALDLFKNM 216
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 72/121 (59%), Gaps = 5/121 (4%)
Query: 122 IKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQ 181
I EAR++F+ + VS ++ M+ GY + N++ +A LF EMP R VSWN M+ G +
Sbjct: 51 IDEAREVFNQVPSPH-VSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVE 109
Query: 182 NGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTI 241
G + A+ LF MPE R+VVSW ++ R G+++ A+ F QM +D ++W ++
Sbjct: 110 CGDMNTAVKLFDEMPE--RSVVSWTAMVNGCFRSGKVDQAERLFYQMP--VKDTAAWNSM 165
Query: 242 V 242
V
Sbjct: 166 V 166
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 153 QIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKAL 212
+I+EA +F ++P + M+ GY ++ ++ AL+LF MP R+VVSWN++I
Sbjct: 50 RIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPV--RDVVSWNSMISGC 107
Query: 213 VRCGRIEDAQWHFNQMQERERDVSSWTTIVD 243
V CG + A F++M ER V SWT +V+
Sbjct: 108 VECGDMNTAVKLFDEMP--ERSVVSWTAMVN 136
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 30/244 (12%)
Query: 18 LNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRL 77
+ H LI FL S SL T C R +RKVFD+ + +
Sbjct: 245 IQVHGLIIKLGFLYEEYVSA-SLITFYANCK----------RIGDSRKVFDEKVHEQVAV 293
Query: 78 WDTMINGYIKCGMIKEARKLFDQMAERDTRL--WTTMLNGYIECGMI------KEARKLF 129
W +++GY ++A +F M R++ L +T +G C + KE +
Sbjct: 294 WTALLSGYSLNKKHEDALSIFSGML-RNSILPNQSTFASGLNSCSALGTLDWGKEMHGVA 352
Query: 130 DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKAL 189
E +++V Y + +A +F ++ ++ VSWN ++ G Q+G+ + A
Sbjct: 353 VKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAF 412
Query: 190 DLFRRM----PEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER----ERDVSSWTTI 241
+F +M EP+ +++ ++ A CG +E + F M +R + +T +
Sbjct: 413 VIFGQMIRLNKEPDE--ITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCM 470
Query: 242 VDCL 245
VD L
Sbjct: 471 VDIL 474
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 147 bits (372), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 126/205 (61%), Gaps = 10/205 (4%)
Query: 45 KRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
+ N ++++ + G AR +F+++ R+ W+TMI+GY+K + +ARKLFD M +R
Sbjct: 41 RATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKR 100
Query: 105 DTRLWTTMLNGYIECGMIK---EARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLF 161
D W TM++GY+ CG I+ EARKLFD + S S W+TM++GY K +I EA LF
Sbjct: 101 DVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFS-WNTMISGYAKNRRIGEALLLF 159
Query: 162 YEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDA 221
+MPER VSW+ M+ G+ QNG+++ A+ LFR+MP + + + ++ L++ R+ +A
Sbjct: 160 EKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLC--ALVAGLIKNERLSEA 217
Query: 222 QWHFNQ----MQERERDVSSWTTIV 242
W Q + RE V ++ T++
Sbjct: 218 AWVLGQYGSLVSGREDLVYAYNTLI 242
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 134/249 (53%), Gaps = 56/249 (22%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIK---EARKLFDQMAER 104
N+ IS K + ARK+FD MP+RD+ W+TMI+GY+ CG I+ EARKLFD+M R
Sbjct: 75 NTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSR 134
Query: 105 DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM 164
D+ W TM++GY + I EA LF+ E++ +WS M+ G+ + +++ A LF +M
Sbjct: 135 DSFSWNTMISGYAKNRRIGEALLLFE-KMPERNAVSWSAMITGFCQNGEVDSAVVLFRKM 193
Query: 165 P-----------------------------------ERKDV--SWNIMMGGYGQNGQIEK 187
P R+D+ ++N ++ GYGQ GQ+E
Sbjct: 194 PVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEA 253
Query: 188 ALDLFRRMPEP----------ER---NVVSWNTIIKALVRCGRIEDAQWHFNQMQERERD 234
A LF ++P+ ER NVVSWN++IKA ++ G + A+ F+QM ++RD
Sbjct: 254 ARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQM--KDRD 311
Query: 235 VSSWTTIVD 243
SW T++D
Sbjct: 312 TISWNTMID 320
Score = 114 bits (284), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 121/247 (48%), Gaps = 55/247 (22%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPE---------------RDMRLWDTMINGYIKCGMIK 92
N+ I + G+ + AR +FDQ+P+ +++ W++MI Y+K G +
Sbjct: 239 NTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVV 298
Query: 93 EARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF-DGPDAEKSVSTWSTMVNGYVKI 151
AR LFDQM +RDT W TM++GY+ +++A LF + P+ + +W+ MV+GY +
Sbjct: 299 SARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPN--RDAHSWNMMVSGYASV 356
Query: 152 NQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM------PEPER----- 200
+E A F + PE+ VSWN ++ Y +N ++A+DLF RM P+P
Sbjct: 357 GNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLL 416
Query: 201 -------------------------NVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDV 235
+V N +I RCG I +++ F++M+ + R+V
Sbjct: 417 SASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLK-REV 475
Query: 236 SSWTTIV 242
+W ++
Sbjct: 476 ITWNAMI 482
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 114/248 (45%), Gaps = 61/248 (24%)
Query: 21 HPLIHGYPFLRTRLASTFSLNTEMKRCNS-----FISRLCKEGRTDHARKVFDQMPERD- 74
+ +I GY R R+ L +M N+ I+ C+ G D A +F +MP +D
Sbjct: 140 NTMISGYAKNR-RIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDS 198
Query: 75 ------------------------------------MRLWDTMINGYIKCGMIKEARKLF 98
+ ++T+I GY + G ++ AR LF
Sbjct: 199 SPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLF 258
Query: 99 DQMAE---------------RDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWST 143
DQ+ + ++ W +M+ Y++ G + AR LFD ++S W+T
Sbjct: 259 DQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTIS-WNT 317
Query: 144 MVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVV 203
M++GYV ++++E+A LF EMP R SWN+M+ GY G +E A F + PE++ V
Sbjct: 318 MIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEK--TPEKHTV 375
Query: 204 SWNTIIKA 211
SWN+II A
Sbjct: 376 SWNSIIAA 383
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 110/246 (44%), Gaps = 55/246 (22%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT- 106
N+ IS K R A +F++MPER+ W MI G+ + G + A LF +M +D+
Sbjct: 140 NTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSS 199
Query: 107 -------------RL-----------------------WTTMLNGYIECGMIKEARKLFD 130
RL + T++ GY + G ++ AR LFD
Sbjct: 200 PLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFD 259
Query: 131 ------GPDAE--------KSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMM 176
G D K+V +W++M+ Y+K+ + A LF +M +R +SWN M+
Sbjct: 260 QIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMI 319
Query: 177 GGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVS 236
GY ++E A LF MP R+ SWN ++ G +E A+ +F + E+
Sbjct: 320 DGYVHVSRMEDAFALFSEMPN--RDAHSWNMMVSGYASVGNVELARHYFEKTPEKH--TV 375
Query: 237 SWTTIV 242
SW +I+
Sbjct: 376 SWNSII 381
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 109/228 (47%), Gaps = 27/228 (11%)
Query: 21 HPLIHGYPFLRTRLASTFSLNTEM-----KRCNSFISRLCKEGRTDHARKVFDQMPERDM 75
+ +I GY + +R+ F+L +EM N +S G + AR F++ PE+
Sbjct: 316 NTMIDGYVHV-SRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHT 374
Query: 76 RLWDTMINGYIKCGMIKEARKLFDQM----AERDTRLWTTMLN---GYIECGMIKEARKL 128
W+++I Y K KEA LF +M + D T++L+ G + + + ++
Sbjct: 375 VSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQI 434
Query: 129 FDG---PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV-SWNIMMGGYGQNGQ 184
PD V + ++ Y + +I E+ R+F EM +++V +WN M+GGY +G
Sbjct: 435 VVKTVIPD----VPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGN 490
Query: 185 IEKALDLFRRMPE----PERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
+AL+LF M P +++ +++ A G +++A+ F M
Sbjct: 491 ASEALNLFGSMKSNGIYPSH--ITFVSVLNACAHAGLVDEAKAQFVSM 536
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 147 bits (370), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 131/209 (62%), Gaps = 5/209 (2%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE 93
L T+S N I+ L + G+ ARK+FD + + W++M+ GY M ++
Sbjct: 7 LRRTYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRD 66
Query: 94 ARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQ 153
ARKLFD+M +R+ W +++GY++ G I EARK+FD E++V +W+ +V GYV +
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFD-LMPERNVVSWTALVKGYVHNGK 125
Query: 154 IEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALV 213
++ AE LF++MPE+ VSW +M+ G+ Q+G+I+ A L+ + P+++ ++ ++I L
Sbjct: 126 VDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMI--PDKDNIARTSMIHGLC 183
Query: 214 RCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+ GR+++A+ F++M ER V +WTT+V
Sbjct: 184 KEGRVDEAREIFDEMS--ERSVITWTTMV 210
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 125/225 (55%), Gaps = 34/225 (15%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N +S K G D ARKVFD MPER++ W ++ GY+ G + A LF +M E++
Sbjct: 83 NGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKV 142
Query: 108 LWTTMLNGYIECGMIKEARKLFDG-PD-----------------------------AEKS 137
WT ML G+++ G I +A KL++ PD +E+S
Sbjct: 143 SWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERS 202
Query: 138 VSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE 197
V TW+TMV GY + N++++A ++F MPE+ +VSW M+ GY QNG+IE A +LF M
Sbjct: 203 VITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM-- 260
Query: 198 PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
P + V++ N +I L + G I A+ F+ M +ER+ +SW T++
Sbjct: 261 PVKPVIACNAMISGLGQKGEIAKARRVFDSM--KERNDASWQTVI 303
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 109/176 (61%), Gaps = 3/176 (1%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
++GR D A K+++ +P++D +MI+G K G + EAR++FD+M+ER WTTM+ G
Sbjct: 153 QDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTG 212
Query: 116 YIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIM 175
Y + + +ARK+FD EK+ +W++M+ GYV+ +IE+AE LF MP + ++ N M
Sbjct: 213 YGQNNRVDDARKIFD-VMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAM 271
Query: 176 MGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER 231
+ G GQ G+I KA +F M ERN SW T+IK R G +A F MQ++
Sbjct: 272 ISGLGQKGEIAKARRVFDSM--KERNDASWQTVIKIHERNGFELEALDLFILMQKQ 325
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 100/171 (58%), Gaps = 2/171 (1%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
S I LCKEGR D AR++FD+M ER + W TM+ GY + + +ARK+FD M E+
Sbjct: 176 TSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEV 235
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
WT+ML GY++ G I++A +LF+ K V + M++G + +I +A R+F M ER
Sbjct: 236 SWTSMLMGYVQNGRIEDAEELFEVMPV-KPVIACNAMISGLGQKGEIAKARRVFDSMKER 294
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRI 218
D SW ++ + +NG +ALDLF M + + ++ T+I L C +
Sbjct: 295 NDASWQTVIKIHERNGFELEALDLFILM-QKQGVRPTFPTLISILSVCASL 344
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 10/193 (5%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
CN+ IS L ++G AR+VFD M ER+ W T+I + + G EA LF M ++
Sbjct: 268 CNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGV 327
Query: 107 R-LWTTMLNGYIECGMI------KEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
R + T+++ C + K+ + V S ++ Y+K ++ +++
Sbjct: 328 RPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKL 387
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP---EPERNVVSWNTIIKALVRCG 216
+F P + + WN ++ GY +G E+AL +F MP + N V++ + A G
Sbjct: 388 IFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAG 447
Query: 217 RIEDAQWHFNQMQ 229
+E+ + M+
Sbjct: 448 MVEEGLKIYESME 460
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF 98
+L + + C S S G+ HA+ V Q + D+ + ++ YIKCG + +++ +F
Sbjct: 333 TLISILSVCASLAS--LHHGKQVHAQLVRCQF-DVDVYVASVLMTMYIKCGELVKSKLIF 389
Query: 99 DQMAERDTRLWTTMLNGYIECGMIKEARKLF--------DGPD-----AEKSVSTWSTMV 145
D+ +D +W ++++GY G+ +EA K+F P+ A S +++ MV
Sbjct: 390 DRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMV 449
Query: 146 NGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP-EPERNVVS 204
+KI E E +F P + M+ G+ G+ +A+++ M EP+ V
Sbjct: 450 EEGLKI--YESMESVFGVKP--ITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAV-- 503
Query: 205 WNTIIKALVRCGRIEDAQWHFNQMQERERDVS 236
W +++ A +++ A++ ++ E E + S
Sbjct: 504 WGSLLGACRTHSQLDVAEFCAKKLIEIEPENS 535
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 138 bits (347), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 120/195 (61%), Gaps = 5/195 (2%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N IS + G + ARK+FD+MPERD+ W+ MI GY++ + +AR+LF+ M ERD
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
W TML+GY + G + +AR +FD EK+ +W+ +++ YV+ +++EEA LF
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRM-PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENW 217
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQ 227
VSWN ++GG+ + +I +A F M R+VVSWNTII + G+I++A+ F+
Sbjct: 218 ALVSWNCLLGGFVKKKKIVEARQFFDSM--NVRDVVSWNTIITGYAQSGKIDEARQLFD- 274
Query: 228 MQERERDVSSWTTIV 242
+ +DV +WT +V
Sbjct: 275 -ESPVQDVFTWTAMV 288
Score = 137 bits (345), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 121/202 (59%), Gaps = 5/202 (2%)
Query: 41 NTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQ 100
++++K N IS + GR + A +VF +MP ++ MI+GY++ G + ARKLFD+
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 101 MAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERL 160
M ERD W M+ GY+ + +AR+LF+ E+ V +W+TM++GY + +++A +
Sbjct: 121 MPERDLVSWNVMIKGYVRNRNLGKARELFE-IMPERDVCSWNTMLSGYAQNGCVDDARSV 179
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIED 220
F MPE+ DVSWN ++ Y QN ++E+A LF+ +VSWN ++ V+ +I +
Sbjct: 180 FDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK--SRENWALVSWNCLLGGFVKKKKIVE 237
Query: 221 AQWHFNQMQERERDVSSWTTIV 242
A+ F+ M RDV SW TI+
Sbjct: 238 ARQFFDSMN--VRDVVSWNTII 257
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 121/232 (52%), Gaps = 40/232 (17%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ I+ + G+ D AR++FD+ P +D+ W M++GYI+ M++EAR+LFD+M ER+
Sbjct: 254 NTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEV 313
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
W ML GY++ ++ A++LFD ++VSTW+TM+ GY + +I EA+ LF +MP+R
Sbjct: 314 SWNAMLAGYVQGERMEMAKELFDVMPC-RNVSTWNTMITGYAQCGKISEAKNLFDKMPKR 372
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP----------------------------- 198
VSW M+ GY Q+G +AL LF +M
Sbjct: 373 DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLH 432
Query: 199 --------ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
E N ++ +CG IE+A F +M +D+ SW T++
Sbjct: 433 GRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA--GKDIVSWNTMI 482
Score = 133 bits (335), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 110/185 (59%), Gaps = 4/185 (2%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N + K+ + AR+ FD M RD+ W+T+I GY + G I EAR+LFD+ +D
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF 282
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
WT M++GYI+ M++EAR+LFD VS W+ M+ GYV+ ++E A+ LF MP R
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKMPERNEVS-WNAMLAGYVQGERMEMAKELFDVMPCR 341
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQ 227
+WN M+ GY Q G+I +A +LF +M P+R+ VSW +I + G +A F Q
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKM--PKRDPVSWAAMIAGYSQSGHSFEALRLFVQ 399
Query: 228 MQERE 232
M ERE
Sbjct: 400 M-ERE 403
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 88/151 (58%), Gaps = 5/151 (3%)
Query: 92 KEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKI 151
K K + + D + W ++ Y+ G EA ++F SVS ++ M++GY++
Sbjct: 50 KSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVS-YNGMISGYLRN 108
Query: 152 NQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKA 211
+ E A +LF EMPER VSWN+M+ GY +N + KA +LF M PER+V SWNT++
Sbjct: 109 GEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIM--PERDVCSWNTMLSG 166
Query: 212 LVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+ G ++DA+ F++M E+ DV SW ++
Sbjct: 167 YAQNGCVDDARSVFDRMPEKN-DV-SWNALL 195
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 85 YIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTM 144
Y KCG I+EA LF +MA +D W TM+ GY G + A + F+ E +TM
Sbjct: 454 YCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATM 513
Query: 145 V---NGYVKINQIEEAERLFYEMPERKDV-----SWNIMMGGYGQNGQIEKALDLFRRMP 196
V + +++ + FY M + V + M+ G+ G +E A +L + MP
Sbjct: 514 VAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMP 573
Query: 197 -EPERNVVSWNTIIKALVRCGRIEDAQ 222
EP+ + W T++ A G E A+
Sbjct: 574 FEPDAAI--WGTLLGASRVHGNTELAE 598
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 66/150 (44%), Gaps = 9/150 (6%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
N+ + CK G + A +F +M +D+ W+TMI GY + G + A + F+ M
Sbjct: 448 NALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLK 507
Query: 105 -DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSV----STWSTMVNGYVKINQIEEAER 159
D +L+ G++ + R+ F + V ++ MV+ + +E+A
Sbjct: 508 PDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHN 567
Query: 160 LFYEMPERKDVS-WNIMMGGYGQNGQIEKA 188
L MP D + W ++G +G E A
Sbjct: 568 LMKNMPFEPDAAIWGTLLGASRVHGNTELA 597
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 118/212 (55%), Gaps = 7/212 (3%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
F +M + K G+ AR FD+MP R W +I+GYI+CG + A KL
Sbjct: 107 FGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKL 166
Query: 98 FDQMAE-RDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEE 156
FDQM +D ++ M++G+++ G + AR+LFD K+V TW+TM++GY I I+
Sbjct: 167 FDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFD-EMTHKTVITWTTMIHGYCNIKDIDA 225
Query: 157 AERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP---ERNVVSWNTIIKALV 213
A +LF MPER VSWN M+GGY QN Q ++ + LF+ M + + V+ +++ A+
Sbjct: 226 ARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAIS 285
Query: 214 RCGRIEDAQW--HFNQMQERERDVSSWTTIVD 243
G + +W F Q ++ ++ V T I+D
Sbjct: 286 DTGALSLGEWCHCFVQRKKLDKKVKVCTAILD 317
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 110/202 (54%), Gaps = 11/202 (5%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPE-RDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
+ IS + G D A K+FDQMP +D+ +++ M++G++K G + AR+LFD+M +
Sbjct: 149 ALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVI 208
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMP-- 165
WTTM++GY I ARKLFD E+++ +W+TM+ GY + Q +E RLF EM
Sbjct: 209 TWTTMIHGYCNIKDIDAARKLFDAM-PERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQAT 267
Query: 166 ---ERKDVSWNIMMGGYGQNGQIEKA--LDLFRRMPEPERNVVSWNTIIKALVRCGRIED 220
+ DV+ ++ G + F + + ++ V I+ +CG IE
Sbjct: 268 TSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEK 327
Query: 221 AQWHFNQMQERERDVSSWTTIV 242
A+ F++M E++ V+SW ++
Sbjct: 328 AKRIFDEMPEKQ--VASWNAMI 347
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 104/223 (46%), Gaps = 40/223 (17%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ + K G AR++FD+M + + W TMI+GY I ARKLFD M ER+
Sbjct: 180 NAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLV 239
Query: 108 LWTTMLNGYIECGMIKEARKLFD--------GPD-------------------------- 133
W TM+ GY + +E +LF PD
Sbjct: 240 SWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCF 299
Query: 134 -----AEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKA 188
+K V + +++ Y K +IE+A+R+F EMPE++ SWN M+ GY NG A
Sbjct: 300 VQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAA 359
Query: 189 LDLF-RRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
LDLF M E + + ++ +I A G +E+ + F+ M+E
Sbjct: 360 LDLFVTMMIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMRE 402
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 99/192 (51%), Gaps = 16/192 (8%)
Query: 62 HARKVFDQMPERDMR-LWDTMINGYIKCGMIKEARKLFDQMAER-----DTRLWTTMLNG 115
+ARK+FDQ P+RD L ++MI Y++ ++ L+ + + D +TT+
Sbjct: 28 YARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKS 87
Query: 116 YIECGMIKEARKLFD-----GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV 170
+ + +L G A+ VST +V+ Y K ++ A F EMP R +V
Sbjct: 88 CSLSMCVYQGLQLHSQIWRFGFCADMYVST--GVVDMYAKFGKMGCARNAFDEMPHRSEV 145
Query: 171 SWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
SW ++ GY + G+++ A LF +MP ++VV +N ++ V+ G + A+ F++M
Sbjct: 146 SWTALISGYIRCGELDLASKLFDQMPHV-KDVVIYNAMMDGFVKSGDMTSARRLFDEMTH 204
Query: 231 RERDVSSWTTIV 242
+ V +WTT++
Sbjct: 205 KT--VITWTTMI 214
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 11/169 (6%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
L+ ++K C + + K G + A+++FD+MPE+ + W+ MI+GY G + A LF
Sbjct: 305 LDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFV 364
Query: 100 QMAERDTRLWTTMLNGYIEC---GMIKEARKLFD-----GPDAEKSVSTWSTMVNGYVKI 151
M + TML C G+++E RK F G +A+ + + MV+ +
Sbjct: 365 TMMIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAK--IEHYGCMVDLLGRA 422
Query: 152 NQIEEAERLFYEMP-ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE 199
++EAE L MP E + + + GQ IE+A + ++ E E
Sbjct: 423 GSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELE 471
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 134 bits (336), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 108/170 (63%), Gaps = 4/170 (2%)
Query: 51 ISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWT 110
++ LC +GR++ A ++FD+MPER++ W+T++ G I+ G +++A+++FD M RD W
Sbjct: 145 LTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWN 204
Query: 111 TMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV 170
M+ GYIE ++EA+ LF G +EK+V TW++MV GY + + EA RLF EMPER V
Sbjct: 205 AMIKGYIENDGMEEAKLLF-GDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIV 263
Query: 171 SWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWN--TIIKALVRCGRI 218
SW M+ G+ N +AL LF M + + + VS N T+I CG +
Sbjct: 264 SWTAMISGFAWNELYREALMLFLEM-KKDVDAVSPNGETLISLAYACGGL 312
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 113/198 (57%), Gaps = 10/198 (5%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERD----MRLWDTMINGYIKCGMIKEARKLFDQMAER 104
+ I R EG HAR + D++P+R + W ++++ Y K G + EAR LF+ M ER
Sbjct: 47 ALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPER 106
Query: 105 DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM 164
+ ML GY++C + EA LF + K+V +W+ M+ + E+A LF EM
Sbjct: 107 NIVTCNAMLTGYVKCRRMNEAWTLF--REMPKNVVSWTVMLTALCDDGRSEDAVELFDEM 164
Query: 165 PERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWH 224
PER VSWN ++ G +NG +EKA +F M P R+VVSWN +IK + +E+A+
Sbjct: 165 PERNVVSWNTLVTGLIRNGDMEKAKQVFDAM--PSRDVVSWNAMIKGYIENDGMEEAKLL 222
Query: 225 FNQMQERERDVSSWTTIV 242
F M E++V +WT++V
Sbjct: 223 FGDMS--EKNVVTWTSMV 238
Score = 127 bits (319), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 116/194 (59%), Gaps = 6/194 (3%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL 108
S +S+ K G D AR +F+ MPER++ + M+ GY+KC + EA LF +M ++
Sbjct: 82 SLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVS 140
Query: 109 WTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK 168
WT ML + G ++A +LFD E++V +W+T+V G ++ +E+A+++F MP R
Sbjct: 141 WTVMLTALCDDGRSEDAVELFD-EMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRD 199
Query: 169 DVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
VSWN M+ GY +N +E+A LF M E+NVV+W +++ R G + +A F +M
Sbjct: 200 VVSWNAMIKGYIENDGMEEAKLLFGDM--SEKNVVTWTSMVYGYCRYGDVREAYRLFCEM 257
Query: 229 QERERDVSSWTTIV 242
ER++ SWT ++
Sbjct: 258 P--ERNIVSWTAMI 269
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 50/272 (18%)
Query: 23 LIHGYPFLRTRLASTFSLNTE---MKRCNSFISRLCKEGRTDHARKVFDQMPE-RDMRLW 78
L+H Y +AS SL E ++ CN I+R K G + A +F+++ D W
Sbjct: 345 LVHMYAS-SGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSW 403
Query: 79 DTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD-------- 130
+MI+GY++ G + A LF ++ ++D WT M++G ++ + EA L
Sbjct: 404 TSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLK 463
Query: 131 -------------GPDAE------------KSVSTW-------STMVNGYVKINQIEEAE 158
G + K+ + + +++V+ Y K IE+A
Sbjct: 464 PLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAY 523
Query: 159 RLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIKALVRCG 216
+F +M ++ VSWN M+ G +G +KAL+LF+ M + + N V++ ++ A G
Sbjct: 524 EIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSG 583
Query: 217 RIEDAQWHFNQMQER---ERDVSSWTTIVDCL 245
I F M+E + + + +++D L
Sbjct: 584 LITRGLELFKAMKETYSIQPGIDHYISMIDLL 615
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 52/213 (24%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM------- 101
S + C+ G A ++F +MPER++ W MI+G+ + +EA LF +M
Sbjct: 236 SMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAV 295
Query: 102 ---------------------------------------AERDTRLWTTMLNGYIECGMI 122
+ D RL ++++ Y G+I
Sbjct: 296 SPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLI 355
Query: 123 KEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKD-VSWNIMMGGYGQ 181
A+ L + + + + ++N Y+K +E AE LF + D VSW M+ GY +
Sbjct: 356 ASAQSLLN---ESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLE 412
Query: 182 NGQIEKALDLFRRMPEPERNVVSWNTIIKALVR 214
G + +A LF+++ +++ V+W +I LV+
Sbjct: 413 AGDVSRAFGLFQKL--HDKDGVTWTVMISGLVQ 443
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 102/237 (43%), Gaps = 45/237 (18%)
Query: 47 CNSFISRLCKEGRTDHARKVFD--QMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
C + G HA+ + + + + D RL ++++ Y G+I A+ L ++
Sbjct: 309 CGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE--SF 366
Query: 105 DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM 164
D + ++N Y++ G ++ A LF+ + +W++M++GY++ + A LF ++
Sbjct: 367 DLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKL 426
Query: 165 PERKDVSWNIMMGGYGQNGQIEKALDLFRRMP----EP---------------------- 198
++ V+W +M+ G QN +A L M +P
Sbjct: 427 HDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGK 486
Query: 199 -------------ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+ +++ N+++ +CG IEDA F +M ++D SW +++
Sbjct: 487 HIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMV--QKDTVSWNSMI 541
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 100/173 (57%), Gaps = 4/173 (2%)
Query: 54 LCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTML 113
LC G A KVF +M E+++ LW +MINGY+ + AR+ FD ERD LW TM+
Sbjct: 38 LCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMI 97
Query: 114 NGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWN 173
+GYIE G + EAR LFD + V +W+T++ GY I +E ER+F +MPER SWN
Sbjct: 98 SGYIEMGNMLEARSLFDQMPC-RDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWN 156
Query: 174 IMMGGYGQNGQIEKALDLFRRMPEPER---NVVSWNTIIKALVRCGRIEDAQW 223
++ GY QNG++ + L F+RM + N + ++ A + G + +W
Sbjct: 157 GLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKW 209
Score = 100 bits (249), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 44/208 (21%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMI 122
AR+ FD PERD+ LW+TMI+GYI+ G + EAR LFDQM RD W T+L GY G +
Sbjct: 78 ARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDM 137
Query: 123 KEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV------------ 170
+ ++FD E++V +W+ ++ GY + ++ E F M + V
Sbjct: 138 EACERVFDDM-PERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLS 196
Query: 171 -----------SW------------------NIMMGGYGQNGQIEKALDLFRRMPEPERN 201
W N ++ YG+ G IE A+++F+ + R+
Sbjct: 197 ACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGI--KRRD 254
Query: 202 VVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
++SWNT+I L G +A F++M+
Sbjct: 255 LISWNTMINGLAAHGHGTEALNLFHEMK 282
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 130 bits (328), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 114/171 (66%), Gaps = 6/171 (3%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD-GP 132
D+ L + +I Y+KCG + +R++FD+M +RD+ + +M++GY++CG+I AR+LFD P
Sbjct: 155 DLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMP 214
Query: 133 DAEKSVSTWSTMVNGYVKINQ-IEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDL 191
K++ +W++M++GY + + ++ A +LF +MPE+ +SWN M+ GY ++G+IE A L
Sbjct: 215 MEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGL 274
Query: 192 FRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
F M P R+VV+W T+I + G + A+ F+QM RDV ++ +++
Sbjct: 275 FDVM--PRRDVVTWATMIDGYAKLGFVHHAKTLFDQMP--HRDVVAYNSMM 321
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 128/226 (56%), Gaps = 15/226 (6%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
IHG+ +T L S L N I K G +R++FD+MP+RD +++MI+
Sbjct: 143 IHGF-LKKTGLWSDLFLQ------NCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMID 195
Query: 84 GYIKCGMIKEARKLFDQMAERDTRL--WTTMLNGYIECG-MIKEARKLF-DGPDAEKSVS 139
GY+KCG+I AR+LFD M L W +M++GY + + A KLF D P EK +
Sbjct: 196 GYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMP--EKDLI 253
Query: 140 TWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE 199
+W++M++GYVK +IE+A+ LF MP R V+W M+ GY + G + A LF +M P
Sbjct: 254 SWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQM--PH 311
Query: 200 RNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
R+VV++N+++ V+ +A F+ M++ + TT+V L
Sbjct: 312 RDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVL 357
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 11/206 (5%)
Query: 48 NSFISRLCKEGR-TDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
NS IS + D A K+F MPE+D+ W++MI+GY+K G I++A+ LFD M RD
Sbjct: 224 NSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDV 283
Query: 107 RLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPE 166
W TM++GY + G + A+ LFD + V +++M+ GYV+ EA +F +M +
Sbjct: 284 VTWATMIDGYAKLGFVHHAKTLFD-QMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEK 342
Query: 167 RK-----DVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVS--WNTIIKALVRCGRIE 219
D + I++ Q G++ KA+D+ + E + + +I +CG I+
Sbjct: 343 ESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQ 402
Query: 220 DAQWHFNQMQERERDVSSWTTIVDCL 245
A F ++ + D W ++ L
Sbjct: 403 HAMLVFEGIENKSID--HWNAMIGGL 426
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 41/227 (18%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS I K GR + A+ +FD MP RD+ W TMI+GY K G + A+ LFDQM RD
Sbjct: 256 NSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVV 315
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWST------------------------ 143
+ +M+ GY++ EA ++F + E + T
Sbjct: 316 AYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLY 375
Query: 144 ---------------MVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKA 188
+++ Y K I+ A +F + + WN M+GG +G E A
Sbjct: 376 IVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESA 435
Query: 189 LDLFRRMP--EPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERER 233
D+ ++ + + +++ ++ A G +++ F M+ + +
Sbjct: 436 FDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHK 482
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 124/223 (55%), Gaps = 10/223 (4%)
Query: 12 LMHAHKLNTHPLIHGYPFLRTR----LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVF 67
L+ AH N+ P + F + A F+ +K C+ + +H K+
Sbjct: 88 LIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLG 147
Query: 68 DQMPERDMRLWDTMINGYIKCGM--IKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEA 125
D+ + + +I+ Y +CG +++A KLF++M+ERDT W +ML G ++ G +++A
Sbjct: 148 ---LSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDA 204
Query: 126 RKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQI 185
R+LFD ++ + +W+TM++GY + ++ +A LF +MPER VSW+ M+ GY + G +
Sbjct: 205 RRLFD-EMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDM 263
Query: 186 EKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
E A +F +MP P +NVV+W II G +++A +QM
Sbjct: 264 EMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQM 306
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 119/222 (53%), Gaps = 42/222 (18%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS + L K G AR++FD+MP+RD+ W+TM++GY +C + +A +LF++M ER+T
Sbjct: 189 NSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTV 248
Query: 108 LWTTMLNGYIECGMIKEARKLFDG-PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMP- 165
W+TM+ GY + G ++ AR +FD P K+V TW+ ++ GY + ++EA+RL +M
Sbjct: 249 SWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVA 308
Query: 166 ---------------------------------ERKDVS-----WNIMMGGYGQNGQIEK 187
+R ++ N ++ Y + G ++K
Sbjct: 309 SGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKK 368
Query: 188 ALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
A D+F + P++++VSWNT++ L G ++A F++M+
Sbjct: 369 AFDVFNDI--PKKDLVSWNTMLHGLGVHGHGKEAIELFSRMR 408
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 121/245 (49%), Gaps = 44/245 (17%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF 98
+L+ ++ IS L +T+ A +VF+Q+ E ++ L +++I + + +A +F
Sbjct: 46 NLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVF 105
Query: 99 DQMA---------------------------------------ERDTRLWTTMLNGYIEC 119
+M D + +++ Y C
Sbjct: 106 SEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRC 165
Query: 120 GM--IKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMG 177
G +++A KLF+ +E+ +W++M+ G VK ++ +A RLF EMP+R +SWN M+
Sbjct: 166 GGLGVRDAMKLFEKM-SERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLD 224
Query: 178 GYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSS 237
GY + ++ KA +LF +M PERN VSW+T++ + G +E A+ F++M ++V +
Sbjct: 225 GYARCREMSKAFELFEKM--PERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVT 282
Query: 238 WTTIV 242
WT I+
Sbjct: 283 WTIII 287
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 119/210 (56%), Gaps = 6/210 (2%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
F + +++ +S IS K G ARKVFD+MPER++ W+ MI GY+ G A L
Sbjct: 75 FGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGL 134
Query: 98 FDQMAE-RDTRLWTTMLNGYIECGMIKEARKLFDG-PDAEKSVSTWSTMVNGYVKINQIE 155
F++++ R+T W M+ GY + I++AR+LF+ P K+V WS M+ YV ++E
Sbjct: 135 FEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKME 194
Query: 156 EAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRC 215
+A + F ++PE+ W++MM GY + G + +A +F R+ R++V WNT+I +
Sbjct: 195 DARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRV--FARDLVIWNTLIAGYAQN 252
Query: 216 GRIEDAQWHFNQMQER--ERDVSSWTTIVD 243
G +DA F MQ E D + ++I+
Sbjct: 253 GYSDDAIDAFFNMQGEGYEPDAVTVSSILS 282
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 112/233 (48%), Gaps = 41/233 (17%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N +S + + A+ FD+MP +D W+TMI GY + G +++AR+LF M E++
Sbjct: 128 NIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEV 187
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
W M++GYIECG +++A F + V W+ M+ GY+K ++E AE +F +M
Sbjct: 188 SWNAMISGYIECGDLEKASHFFKVAPV-RGVVAWTAMITGYMKAKKVELAEAMFKDMTVN 246
Query: 168 KD-VSWNIMMGGYGQNGQIEKALDLFRRMPEPE--------------------------- 199
K+ V+WN M+ GY +N + E L LFR M E
Sbjct: 247 KNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQI 306
Query: 200 ----------RNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+V + ++I +CG + DA F M +++DV +W ++
Sbjct: 307 HQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVM--KKKDVVAWNAMI 357
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 108/196 (55%), Gaps = 5/196 (2%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIK-CGMIKEARKLFDQMAERDT 106
N I+R + G D A +VF M ++ W++++ G K + EA +LFD++ E DT
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDT 124
Query: 107 RLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPE 166
+ ML+ Y+ ++A+ FD K ++W+TM+ GY + ++E+A LFY M E
Sbjct: 125 FSYNIMLSCYVRNVNFEKAQSFFDRMPF-KDAASWNTMITGYARRGEMEKARELFYSMME 183
Query: 167 RKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFN 226
+ +VSWN M+ GY + G +EKA F+ P R VV+W +I ++ ++E A+ F
Sbjct: 184 KNEVSWNAMISGYIECGDLEKASHFFK--VAPVRGVVAWTAMITGYMKAKKVELAEAMFK 241
Query: 227 QMQERERDVSSWTTIV 242
M +++ +W ++
Sbjct: 242 DMT-VNKNLVTWNAMI 256
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 102/184 (55%), Gaps = 3/184 (1%)
Query: 48 NSFISRLCKE-GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
NS + + K+ R A ++FD++PE D ++ M++ Y++ ++A+ FD+M +D
Sbjct: 96 NSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDA 155
Query: 107 RLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPE 166
W TM+ GY G +++AR+LF EK+ +W+ M++GY++ +E+A F P
Sbjct: 156 ASWNTMITGYARRGEMEKARELFYSM-MEKNEVSWNAMISGYIECGDLEKASHFFKVAPV 214
Query: 167 RKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFN 226
R V+W M+ GY + ++E A +F+ M +N+V+WN +I V R ED F
Sbjct: 215 RGVVAWTAMITGYMKAKKVELAEAMFKDMT-VNKNLVTWNAMISGYVENSRPEDGLKLFR 273
Query: 227 QMQE 230
M E
Sbjct: 274 AMLE 277
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 102/243 (41%), Gaps = 46/243 (18%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF-DQMAERDT 106
N+ IS + G + A F P R + W MI GY+K ++ A +F D ++
Sbjct: 190 NAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNL 249
Query: 107 RLWTTMLNGYIECGMIKEARKLFDG-------PDAE------------------------ 135
W M++GY+E ++ KLF P++
Sbjct: 250 VTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQI 309
Query: 136 -------KSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKA 188
V+ +++++ Y K ++ +A +LF M ++ V+WN M+ GY Q+G +KA
Sbjct: 310 VSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKA 369
Query: 189 LDLFRRMPEPERNVVSWNTIIKALVRC---GRIEDAQWHFNQM---QERERDVSSWTTIV 242
L LFR M + + W T + L+ C G + +F M + E +T +V
Sbjct: 370 LCLFREMID-NKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMV 428
Query: 243 DCL 245
D L
Sbjct: 429 DLL 431
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 9/165 (5%)
Query: 33 RLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIK 92
++ S +L ++ S IS CK G A K+F+ M ++D+ W+ MI+GY + G
Sbjct: 308 QIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNAD 367
Query: 93 EARKLFDQMAERDTRL-WTTMLNGYIEC---GMIKEARKLFDG----PDAEKSVSTWSTM 144
+A LF +M + R W T + + C G++ F+ E ++ M
Sbjct: 368 KALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCM 427
Query: 145 VNGYVKINQIEEAERLFYEMPERKDVS-WNIMMGGYGQNGQIEKA 188
V+ + ++EEA +L MP R + + ++G + +E A
Sbjct: 428 VDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELA 472
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 132 PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQN-GQIEKALD 190
P + + + ++ V+ I+ A R+F+ M + ++WN ++ G ++ ++ +A
Sbjct: 55 PSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQ 114
Query: 191 LFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
LF +PEP+ S+N ++ VR E AQ F++M +D +SW T++
Sbjct: 115 LFDEIPEPD--TFSYNIMLSCYVRNVNFEKAQSFFDRMP--FKDAASWNTMI 162
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 114/237 (48%), Gaps = 43/237 (18%)
Query: 43 EMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM- 101
E+ C+S + CK GR AR +FD+M ER++ W MI+GY K G ++ LF +M
Sbjct: 207 EVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMR 266
Query: 102 ---------------------------------------AERDTRLWTTMLNGYIECGMI 122
E D L ++++ Y + G +
Sbjct: 267 QEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYM 326
Query: 123 KEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQN 182
EA+ +F + SVS W++++ G V+ QI EA LF +MP + VSW M+ G+
Sbjct: 327 GEAKAVFGVMKNKDSVS-WNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGK 385
Query: 183 GQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWT 239
G+I K ++LF MPE + ++W +I A V G E+A F++M ++E +S+T
Sbjct: 386 GEISKCVELFGMMPEKDN--ITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYT 440
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N +S + G+ + A +VF M +++ +M++GY K G I +AR LFD+M ER+
Sbjct: 181 NVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVI 240
Query: 108 LWTTMLNGYIECGMIKEARKLF------------------------------DGPDAEKS 137
WT M++GY + G ++ LF +G
Sbjct: 241 TWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGL 300
Query: 138 VS---------TWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKA 188
VS +++++ Y K+ + EA+ +F M + VSWN ++ G Q QI +A
Sbjct: 301 VSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEA 360
Query: 189 LDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
+LF +M P +++VSW +IK G I F M E+D +WT ++
Sbjct: 361 YELFEKM--PGKDMVSWTDMIKGFSGKGEISKCVELFGMMP--EKDNITWTAMISAF 413
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 111/232 (47%), Gaps = 38/232 (16%)
Query: 46 RCNSFISRLCKEGRTDHARKVFDQMPERDMRL-WDTMINGYIKCGMIKEARKLFDQMAER 104
RCNS ++ E T R + ++ I+ + + G ++EA +F QM+ R
Sbjct: 20 RCNSTLAVSNHEPITQKTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNR 79
Query: 105 DTRLWTTMLNGYIECGMIKEARKLFDGPDA------------------------------ 134
W M++ Y E G + +A ++FD
Sbjct: 80 SIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDI 139
Query: 135 -EKSVSTWSTMVNGYVKINQIEEAERLFYEMPE--RKDVSWNIMMGGYGQNGQIEKALDL 191
EK+ +++TM+ G+V+ + +EAE L+ E P R V+ N+++ GY + G+ +A+ +
Sbjct: 140 PEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRV 199
Query: 192 FRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVD 243
F+ M E VVS ++++ + GRI DA+ F++M ER+V +WT ++D
Sbjct: 200 FQGMAVKE--VVSCSSMVHGYCKMGRIVDARSLFDRMT--ERNVITWTAMID 247
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 108/236 (45%), Gaps = 47/236 (19%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPE--RDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
+ I+ + GR D A ++ + P RD + +++GY++ G EA ++F MA ++
Sbjct: 149 TMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEV 208
Query: 107 RLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPE 166
++M++GY + G I +AR LFD E++V TW+ M++GY K E+ LF M +
Sbjct: 209 VSCSSMVHGYCKMGRIVDARSLFD-RMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQ 267
Query: 167 RKDVS----------------------------------------WNIMMGGYGQNGQIE 186
DV N +M Y + G +
Sbjct: 268 EGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMG 327
Query: 187 KALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+A +F M ++ VSWN++I LV+ +I +A F +M +D+ SWT ++
Sbjct: 328 EAKAVFGVM--KNKDSVSWNSLITGLVQRKQISEAYELFEKMP--GKDMVSWTDMI 379
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 109/228 (47%), Gaps = 20/228 (8%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
IHG L S L ++ NS +S K G A+ VF M +D W+++I
Sbjct: 297 IHG-------LVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLIT 349
Query: 84 GYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWST 143
G ++ I EA +LF++M +D WT M+ G+ G I + +LF G EK TW+
Sbjct: 350 GLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELF-GMMPEKDNITWTA 408
Query: 144 MVNGYVKINQIEEAERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPEPE 199
M++ +V EEA F++M +++ +++ ++ + + L + R+ +
Sbjct: 409 MISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRV--VK 466
Query: 200 RNVVS----WNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVD 243
N+V+ N+++ +CG DA F+ + E ++ S+ T++
Sbjct: 467 MNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS--EPNIVSYNTMIS 512
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 91/190 (47%), Gaps = 12/190 (6%)
Query: 57 EGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGY 116
EG H R V D+ + +++++ Y KCG +A K+F ++E + + TM++GY
Sbjct: 456 EGLQIHGR-VVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGY 514
Query: 117 IECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS-- 171
G K+A KLF + E + T+ +++ V + ++ + F M ++
Sbjct: 515 SYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPG 574
Query: 172 ---WNIMMGGYGQNGQIEKALDLFRRMP-EPERNVVSWNTIIKALVRCGRIEDAQWHFNQ 227
+ M+ G++G ++ A +L MP +P V W +++ A R++ A+ +
Sbjct: 575 PDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGV--WGSLLSASKTHLRVDLAELAAKK 632
Query: 228 MQERERDVSS 237
+ E E D ++
Sbjct: 633 LIELEPDSAT 642
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 95/180 (52%), Gaps = 5/180 (2%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS + + G D AR+VFD++PE+D W+ +I+ Y K G + A LF M +
Sbjct: 174 NSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPA 233
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
W ++ GY+ C +K AR FD + VS W TM++GY K+ ++ AE LF M ++
Sbjct: 234 SWNILIGGYVNCREMKLARTYFDAMPQKNGVS-WITMISGYTKLGDVQSAEELFRLMSKK 292
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNV----VSWNTIIKALVRCGRIEDAQW 223
+ ++ M+ Y QNG+ + AL LF +M E + ++ ++++ A + G W
Sbjct: 293 DKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTW 352
Score = 110 bits (275), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 102/174 (58%), Gaps = 3/174 (1%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYI 117
G + A+K FD + E++ W+++++GY++ G + EAR++FD++ E+D W +++ Y
Sbjct: 153 GYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYA 212
Query: 118 ECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMG 177
+ G + A LF KS ++W+ ++ GYV +++ A F MP++ VSW M+
Sbjct: 213 KKGDMGNACSLFSAMPL-KSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMIS 271
Query: 178 GYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER 231
GY + G ++ A +LFR M + ++ V ++ +I + G+ +DA F QM ER
Sbjct: 272 GYTKLGDVQSAEELFRLMSKKDKLV--YDAMIACYTQNGKPKDALKLFAQMLER 323
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 95/164 (57%), Gaps = 5/164 (3%)
Query: 81 MINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVST 140
++ Y + G I+ A+K FD +AE++T W ++L+GY+E G + EAR++FD EK +
Sbjct: 145 LVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFD-KIPEKDAVS 203
Query: 141 WSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER 200
W+ +++ Y K + A LF MP + SWNI++GGY +++ A F M P++
Sbjct: 204 WNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAM--PQK 261
Query: 201 NVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVDC 244
N VSW T+I + G ++ A+ F M ++++ V + ++ C
Sbjct: 262 NGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLV--YDAMIAC 303
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 81/133 (60%), Gaps = 5/133 (3%)
Query: 110 TTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKD 169
T ++ Y G I+ A+K FD AEK+ +W+++++GY++ +++EA R+F ++PE+
Sbjct: 143 TGLVGLYSRLGYIELAKKAFDDI-AEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDA 201
Query: 170 VSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
VSWN+++ Y + G + A LF M P ++ SWN +I V C ++ A+ +F+ M
Sbjct: 202 VSWNLIISSYAKKGDMGNACSLFSAM--PLKSPASWNILIGGYVNCREMKLARTYFDAMP 259
Query: 230 ERERDVSSWTTIV 242
+++ SW T++
Sbjct: 260 --QKNGVSWITMI 270
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 109/235 (46%), Gaps = 46/235 (19%)
Query: 55 CKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLN 114
C+E + AR FD MP+++ W TMI+GY K G ++ A +LF M+++D ++ M+
Sbjct: 245 CREMKL--ARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIA 302
Query: 115 GYIECGMIKEARKLFDG---------PD--------------AEKSVSTW---------- 141
Y + G K+A KLF PD S TW
Sbjct: 303 CYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGI 362
Query: 142 -------STMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRR 194
+++++ Y+K +A ++F + ++ VS++ M+ G G NG +A LF
Sbjct: 363 KIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTA 422
Query: 195 MPEPE--RNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSS--WTTIVDCL 245
M E + NVV++ ++ A G +++ FN M++ + S+ + +VD L
Sbjct: 423 MIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDML 477
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE 93
L+S S N+++ N+ + T+H K+ D L ++I+ Y+K G +
Sbjct: 334 LSSVVSANSQLG--NTSFGTWVESYITEHGIKI-------DDLLSTSLIDLYMKGGDFAK 384
Query: 94 ARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNGYVK 150
A K+F + ++DT ++ M+ G GM EA LF +K +V T++ +++ Y
Sbjct: 385 AFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSH 444
Query: 151 INQIEEAERLFYEMP----ERKDVSWNIMMGGYGQNGQIEKALDLFRRMP-EPERNVVSW 205
++E + F M E + IM+ G+ G++E+A +L + MP +P V W
Sbjct: 445 SGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGV--W 502
Query: 206 NTIIKA 211
++ A
Sbjct: 503 GALLLA 508
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 110/218 (50%), Gaps = 14/218 (6%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
F ++ NS + G A ++F QM RD+ W +M+ GY KCGM++ AR++
Sbjct: 146 FGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREM 205
Query: 98 FDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMV---NGYVKINQI 154
FD+M R+ W+ M+NGY + ++A LF+ E V+ + MV + + +
Sbjct: 206 FDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGAL 265
Query: 155 EEAERLFYEMPERKDVSWNIMMGG-----YGQNGQIEKALDLFRRMPEPERNVVSWNTII 209
E ER YE + ++ N+++G + + G IEKA+ +F +PE + +SW++II
Sbjct: 266 EFGERA-YEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDS--LSWSSII 322
Query: 210 KALVRCGRIEDAQWHFNQMQER---ERDVSSWTTIVDC 244
K L G A +F+QM RDV+ + C
Sbjct: 323 KGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSAC 360
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 100/189 (52%), Gaps = 7/189 (3%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
+S +K C +F +EGR H + + D+ + +T++N Y + G + ARK+
Sbjct: 141 YSFTFVLKACAAFCG--FEEGRQIHGLFIKSGLV-TDVFVENTLVNVYGRSGYFEIARKV 197
Query: 98 FDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEA 157
D+M RD W ++L+ Y+E G++ EAR LFD + E++V +W+ M++GY ++EA
Sbjct: 198 LDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEME-ERNVESWNFMISGYAAAGLVKEA 256
Query: 158 ERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRC-- 215
+ +F MP R VSWN M+ Y G + L++F +M + T++ L C
Sbjct: 257 KEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACAS 316
Query: 216 -GRIEDAQW 223
G + +W
Sbjct: 317 LGSLSQGEW 325
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 121/245 (49%), Gaps = 50/245 (20%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
IHG F+++ L T++ N+ ++ + G + ARKV D+MP RD W+++++
Sbjct: 162 IHGL-FIKSGLV------TDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLS 214
Query: 84 GYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWST 143
Y++ G++ EAR LFD+M ER+ W M++GY G++KEA+++FD + V +W+
Sbjct: 215 AYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPV-RDVVSWNA 273
Query: 144 MVNGYVKINQIEEAERLFYEM----PERKD-------VSWNIMMGG-------------- 178
MV Y + E +F +M E+ D +S +G
Sbjct: 274 MVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKH 333
Query: 179 ---------------YGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQW 223
Y + G+I+KAL++FR +R+V +WN+II L G +DA
Sbjct: 334 GIEIEGFLATALVDMYSKCGKIDKALEVFR--ATSKRDVSTWNSIISDLSVHGLGKDALE 391
Query: 224 HFNQM 228
F++M
Sbjct: 392 IFSEM 396
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 81/160 (50%), Gaps = 9/160 (5%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
+ + K G+ D A +VF +RD+ W+++I+ G+ K+A ++F +M
Sbjct: 342 ATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGF 401
Query: 107 R----LWTTMLNGYIECGMIKEARKLFDGPDA----EKSVSTWSTMVNGYVKINQIEEAE 158
+ + +L+ GM+ +ARKLF+ + E ++ + MV+ ++ +IEEAE
Sbjct: 402 KPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAE 461
Query: 159 RLFYEMP-ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE 197
L E+P + + ++G + GQ+E+A + R+ E
Sbjct: 462 ELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLE 501
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 82/172 (47%), Gaps = 10/172 (5%)
Query: 77 LWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEK 136
L +++ Y KCG I +A ++F ++RD W ++++ G+ K+A ++F E
Sbjct: 341 LATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEG 400
Query: 137 SVSTWSTMVNGYVKINQI---EEAERLFYEMPERKDVS-----WNIMMGGYGQNGQIEKA 188
T + N + ++A +LF M V + M+ G+ G+IE+A
Sbjct: 401 FKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEA 460
Query: 189 LDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE-RDVSSWT 239
+L +P E +++ +++ A R G++E A+ N++ E RD S +
Sbjct: 461 EELVNEIPADEASIL-LESLLGACKRFGQLEQAERIANRLLELNLRDSSGYA 511
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 104/202 (51%), Gaps = 26/202 (12%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
+S S K G+ D A ++FD+MP +D W+ MI G +KC + AR+LFD+ E+D
Sbjct: 182 SSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVV 241
Query: 108 LWTTMLNGYIECGMIKEARKLF-------DGPDAEKSVSTWSTMVNGYVKINQIEEAERL 160
W M++GY+ CG KEA +F + PD V T ++++ + +E +RL
Sbjct: 242 TWNAMISGYVNCGYPKEALGIFKEMRDAGEHPD----VVTILSLLSACAVLGDLETGKRL 297
Query: 161 FYEMPERKDVS---------WNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKA 211
+ E VS WN ++ Y + G I++A+++FR + +R++ +WNT+I
Sbjct: 298 HIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGV--KDRDLSTWNTLIVG 355
Query: 212 LVRCGRIEDAQWHFNQMQERER 233
L + A+ +E +R
Sbjct: 356 LA----LHHAEGSIEMFEEMQR 373
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 114/246 (46%), Gaps = 18/246 (7%)
Query: 8 LSFILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVF 67
+F+L KL +G+ F + F LN +K N+ I G A ++F
Sbjct: 115 FTFVLKACSKLEWRS--NGFAFHGKVVRHGFVLNEYVK--NALILFHANCGDLGIASELF 170
Query: 68 DQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARK 127
D + W +M +GY K G I EA +LFD+M +D W M+ G ++C + AR+
Sbjct: 171 DDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARE 230
Query: 128 LFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM---PERKDVSWNI-MMGGYGQNG 183
LFD EK V TW+ M++GYV +EA +F EM E DV + ++ G
Sbjct: 231 LFD-RFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLG 289
Query: 184 QIEKALDLFRRMPEPERNVVS-------WNTIIKALVRCGRIEDAQWHFNQMQERERDVS 236
+E L + E S WN +I +CG I+ A F + ++RD+S
Sbjct: 290 DLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGV--KDRDLS 347
Query: 237 SWTTIV 242
+W T++
Sbjct: 348 TWNTLI 353
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 103 bits (258), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 118/238 (49%), Gaps = 27/238 (11%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
IHGY L++ S S++T + S K + ARK+FD+ PE+ + W+ MI+
Sbjct: 341 IHGYC-LKSNFLSHASVSTALTTVYS------KLNEIESARKLFDESPEKSLPSWNAMIS 393
Query: 84 GYIKCGMIKEARKLFDQMAERDTR----LWTTMLNGYIECGMIKEARKLFD---GPDAEK 136
GY + G+ ++A LF +M + + T +L+ + G + + + D D E
Sbjct: 394 GYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFES 453
Query: 137 SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM- 195
S+ + ++ Y K I EA RLF M ++ +V+WN M+ GYG +GQ ++AL++F M
Sbjct: 454 SIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEML 513
Query: 196 -----PEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER---ERDVSSWTTIVDCL 245
P P V++ ++ A G +++ FN M R E V + +VD L
Sbjct: 514 NSGITPTP----VTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDIL 567
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 50 FISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLW 109
FIS K G+ +F + + D+ ++ MI+GY G + + LF ++ RL
Sbjct: 262 FISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLR 321
Query: 110 TTML------NGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYE 163
++ L +G++ L + SVST T V Y K+N+IE A +LF E
Sbjct: 322 SSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTV--YSKLNEIESARKLFDE 379
Query: 164 MPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIKALVRCGRIEDA 221
PE+ SWN M+ GY QNG E A+ LFR M + E N V+ I+ A + G +
Sbjct: 380 SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLG 439
Query: 222 QWHFNQMQERERDVSSWTT 240
+W + ++ + + S + +
Sbjct: 440 KWVHDLVRSTDFESSIYVS 458
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 8/145 (5%)
Query: 59 RTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF-DQMAERDTRL-WTTMLNGY 116
R + ARKVFD+MPE+D LW+TMI+GY K M E+ ++F D + E TRL TT+L+
Sbjct: 169 RVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDIL 228
Query: 117 IECGMIKEARKLFDGPDAEKSVSTWS------TMVNGYVKINQIEEAERLFYEMPERKDV 170
++E R +S ++ Y K +I+ LF E + V
Sbjct: 229 PAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIV 288
Query: 171 SWNIMMGGYGQNGQIEKALDLFRRM 195
++N M+ GY NG+ E +L LF+ +
Sbjct: 289 AYNAMIHGYTSNGETELSLSLFKEL 313
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 53 RLCKEGRTDHARKVFDQMPERDMRLWDTMINGYI-------KCGMIKEARKLFDQMAERD 105
RL G +AR +F + D+ L++ ++ G+ + RK D
Sbjct: 61 RLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSS 120
Query: 106 TRLWT-TMLNGYIE--CGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFY 162
T + + +G+ + G + + + DG D+E + S +V Y K ++E+A ++F
Sbjct: 121 TYAFAISAASGFRDDRAGRVIHGQAVVDGCDSE--LLLGSNIVKMYFKFWRVEDARKVFD 178
Query: 163 EMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
MPE+ + WN M+ GY +N +++ +FR +
Sbjct: 179 RMPEKDTILWNTMISGYRKNEMYVESIQVFRDL 211
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 101/224 (45%), Gaps = 40/224 (17%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ + CK G D AR VFD M +++++ W +M+ GY+ G I EAR LF++ +D
Sbjct: 186 NALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVV 245
Query: 108 LWTTMLNGYIECGMIKEARKLFDG-------PDAEKSVS--------------------- 139
LWT M+NGY++ EA +LF PD VS
Sbjct: 246 LWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYI 305
Query: 140 ----------TWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKAL 189
+ +V+ Y K IE A +FYE+ ER SW ++ G NG +AL
Sbjct: 306 NENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRAL 365
Query: 190 DLFRRMPE--PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER 231
DL+ M + +++ ++ A G + + + F+ M ER
Sbjct: 366 DLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTER 409
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 95/177 (53%), Gaps = 9/177 (5%)
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG 131
E +R+ + +++ + KCG + +AR +FD M +++ + WT+M+ GY+ G I EAR LF+
Sbjct: 179 EMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFER 238
Query: 132 PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNI----MMGGYGQNGQIEK 187
K V W+ M+NGYV+ N+ +EA LF M N ++ G Q G +E+
Sbjct: 239 SPV-KDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQ 297
Query: 188 ALDLFRRMPEPERNV--VSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+ + E V V ++ +CG IE A F ++ +ERD +SWT+++
Sbjct: 298 GKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEI--KERDTASWTSLI 352
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 39/138 (28%)
Query: 142 STMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP----- 196
++++ Y + +IE ++F EMP+R VSWN ++ Y NG+ E A+ +F+RM
Sbjct: 85 NSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNL 144
Query: 197 --------------------------------EPERNVVSWNTIIKALVRCGRIEDAQWH 224
E E +V N ++ +CG ++ A+
Sbjct: 145 KFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAV 204
Query: 225 FNQMQERERDVSSWTTIV 242
F+ M R+++V WT++V
Sbjct: 205 FDSM--RDKNVKCWTSMV 220
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 112/252 (44%), Gaps = 52/252 (20%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
+H Y R + F NS +S K G+ D AR +F++MP +D+ W+ +++
Sbjct: 308 VHAYVLRREDFSFHFD--------NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLS 359
Query: 84 GYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAE-------- 135
GY+ G I EA+ +F +M E++ W M++G E G +E KLF E
Sbjct: 360 GYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYA 419
Query: 136 ------------------------------KSVSTWSTMVNGYVKINQIEEAERLFYEMP 165
S+S + ++ Y K +EEA ++F MP
Sbjct: 420 FSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP 479
Query: 166 ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE----PERNVVSWNTIIKALVRCGRIEDA 221
VSWN ++ GQ+G +A+D++ M + P+R ++ T++ A G ++
Sbjct: 480 CLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDR--ITLLTVLTACSHAGLVDQG 537
Query: 222 QWHFNQMQERER 233
+ +F+ M+ R
Sbjct: 538 RKYFDSMETVYR 549
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 40/205 (19%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL-WTTMLNGYIECGM 121
ARKVFD++ E+D R W TM+ GY+K G +L + M + + + M++GY+ G
Sbjct: 207 ARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGF 266
Query: 122 IKEARKL-------------FDGPDAEKSVSTW------------------------STM 144
+EA ++ F P ++ +T +++
Sbjct: 267 YQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSL 326
Query: 145 VNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVS 204
V+ Y K + +EA +F +MP + VSWN ++ GY +G I +A +F+ M E+N++S
Sbjct: 327 VSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEM--KEKNILS 384
Query: 205 WNTIIKALVRCGRIEDAQWHFNQMQ 229
W +I L G E+ F+ M+
Sbjct: 385 WMIMISGLAENGFGEEGLKLFSCMK 409
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 46/209 (22%)
Query: 79 DTMINGYIKCG----MIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDA 134
+ +++ Y KC ++ ARK+FD++ E+D R WTTM+ GY++ G +L +G D
Sbjct: 188 NALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDD 247
Query: 135 EKSVSTWSTMVNGYVKINQIEEAERLFYEMPE---------------------------- 166
+ ++ M++GYV +EA + M
Sbjct: 248 NMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQ 307
Query: 167 -------RKDVSW---NIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCG 216
R+D S+ N ++ Y + G+ ++A +F +M P +++VSWN ++ V G
Sbjct: 308 VHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKM--PAKDLVSWNALLSGYVSSG 365
Query: 217 RIEDAQWHFNQMQERERDVSSWTTIVDCL 245
I +A+ F +M +E+++ SW ++ L
Sbjct: 366 HIGEAKLIFKEM--KEKNILSWMIMISGL 392
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 96/230 (41%), Gaps = 46/230 (20%)
Query: 37 TFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARK 96
TF N I CK ++AR++FD++ E D TM++GY G I AR
Sbjct: 42 TFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARG 101
Query: 97 LFDQ--MAERDTRLWTTMLNGY-----------IECGMIKEARK--------LFDG---- 131
+F++ + RDT ++ M+ G+ + C M E K + G
Sbjct: 102 VFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALV 161
Query: 132 PDAEKS----------------VSTWSTMVNGYVKINQ----IEEAERLFYEMPERKDVS 171
D EK S + +V+ Y K + A ++F E+ E+ + S
Sbjct: 162 ADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERS 221
Query: 172 WNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDA 221
W MM GY +NG + +L M + + +V++N +I V G ++A
Sbjct: 222 WTTMMTGYVKNGYFDLGEELLEGMDDNMK-LVAYNAMISGYVNRGFYQEA 270
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 39/211 (18%)
Query: 51 ISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA-------- 102
I+ K ++ARK FD+MPE+ + W+ M++GY + G ++A +LF+ M
Sbjct: 205 ITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNE 264
Query: 103 ---------------------------ERDTRL----WTTMLNGYIECGMIKEARKLFDG 131
E+ RL T +L+ + +C I+ AR++F+
Sbjct: 265 TTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNE 324
Query: 132 PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDL 191
++++ TW+ M++GY +I + A +LF MP+R VSWN ++ GY NGQ A++
Sbjct: 325 LGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEF 384
Query: 192 FRRMPEPERNVVSWNTIIKALVRCGRIEDAQ 222
F M + + T+I L CG + D +
Sbjct: 385 FEDMIDYGDSKPDEVTMISVLSACGHMADLE 415
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 81/141 (57%), Gaps = 3/141 (2%)
Query: 73 RDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGP 132
+D + + +++ Y+K ++ ARK+FDQ+++R W M++GY + G +EA KLFD
Sbjct: 134 KDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMM 193
Query: 133 DAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLF 192
E V +W+ M+ G+ K+ +E A + F MPE+ VSWN M+ GY QNG E AL LF
Sbjct: 194 -PENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLF 252
Query: 193 RRMPE--PERNVVSWNTIIKA 211
M N +W +I A
Sbjct: 253 NDMLRLGVRPNETTWVIVISA 273
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 43/234 (18%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N + K + ARKVFDQ+ +R W+ MI+GY K G +EA KLFD M E D
Sbjct: 140 NVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVV 199
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM--- 164
WT M+ G+ + ++ ARK FD EKSV +W+ M++GY + E+A RLF +M
Sbjct: 200 SWTVMITGFAKVKDLENARKYFDRM-PEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRL 258
Query: 165 -PERKDVSWNIMMGG-----------------------------------YGQNGQIEKA 188
+ +W I++ + + I+ A
Sbjct: 259 GVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSA 318
Query: 189 LDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+F + +RN+V+WN +I R G + A+ F+ M +R+V SW +++
Sbjct: 319 RRIFNELG-TQRNLVTWNAMISGYTRIGDMSSARQLFDTMP--KRNVVSWNSLI 369
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 46/211 (21%)
Query: 63 ARKVFDQM-PERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGM 121
AR++F+++ +R++ W+ MI+GY + G + AR+LFD M +R+ W +++ GY G
Sbjct: 318 ARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQ 377
Query: 122 IKEARKLFDG--------PDAEKSVSTWSTM-----------VNGYVKINQIE------- 155
A + F+ PD +S S + Y++ NQI+
Sbjct: 378 AALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYR 437
Query: 156 -------------EAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP----EP 198
EA+R+F EM ER VS+N + + NG + L+L +M EP
Sbjct: 438 SLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEP 497
Query: 199 ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
+R V++ +++ A R G +++ Q F ++
Sbjct: 498 DR--VTYTSVLTACNRAGLLKEGQRIFKSIR 526
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 107/234 (45%), Gaps = 40/234 (17%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
S IS + GR + A KVFD+ P RD+ + +I GY G I+ A+KLFD++ +D
Sbjct: 173 TSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVV 232
Query: 108 LWTTMLNGYIECGMIKEARKLFDG-------PDAEKSVSTWS------------------ 142
W M++GY E G KEA +LF PD V+ S
Sbjct: 233 SWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWI 292
Query: 143 -------------TMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKAL 189
+++ Y K ++E A LF +P + +SWN ++GGY ++AL
Sbjct: 293 DDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEAL 352
Query: 190 DLFRRMPEPER--NVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTI 241
LF+ M N V+ +I+ A G I+ +W + +R + V++ +++
Sbjct: 353 LLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSL 406
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 117/253 (46%), Gaps = 48/253 (18%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE 93
L ++++ +K C S+ KEG+ H V + D+ + ++I+ Y++ G +++
Sbjct: 131 LPNSYTFPFVLKSCAK--SKAFKEGQQIHGH-VLKLGCDLDLYVHTSLISMYVQNGRLED 187
Query: 94 ARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQ 153
A K+FD+ RD +T ++ GY G I+ A+KLFD K V +W+ M++GY +
Sbjct: 188 AHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPV-KDVVSWNAMISGYAETGN 246
Query: 154 IEEAERLFYEM------PERKDV---------SWNIMMG----------GYGQN------ 182
+EA LF +M P+ + S +I +G G+G N
Sbjct: 247 YKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNA 306
Query: 183 --------GQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM---QER 231
G++E A LF R+ P ++V+SWNT+I ++A F +M E
Sbjct: 307 LIDLYSKCGELETACGLFERL--PYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 364
Query: 232 ERDVSSWTTIVDC 244
DV+ + + C
Sbjct: 365 PNDVTMLSILPAC 377
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 108/257 (42%), Gaps = 79/257 (30%)
Query: 62 HARKVFDQMPERDMRLWDTMINGY----------------IKCGMI-------------- 91
+A VF + E ++ +W+TM G+ I G++
Sbjct: 86 YAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCA 145
Query: 92 -----KEARKLFDQM----AERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWS 142
KE +++ + + D + T++++ Y++ G +++A K+FD + V +++
Sbjct: 146 KSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFD-KSPHRDVVSYT 204
Query: 143 TMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM------- 195
++ GY IE A++LF E+P + VSWN M+ GY + G ++AL+LF+ M
Sbjct: 205 ALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRP 264
Query: 196 -----------------PEPERNVVSW-------------NTIIKALVRCGRIEDAQWHF 225
E R V W N +I +CG +E A F
Sbjct: 265 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 324
Query: 226 NQMQERERDVSSWTTIV 242
++ +DV SW T++
Sbjct: 325 ERLP--YKDVISWNTLI 339
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 13/167 (7%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
+ +K N+ I K G + A +F+++P +D+ W+T+I GY + KEA LF
Sbjct: 297 FGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQ 356
Query: 100 QMAER-DTRLWTTMLNGYIEC---GMIKEAR-------KLFDGPDAEKSVSTWSTMVNGY 148
+M +T TML+ C G I R K G S+ T ++++ Y
Sbjct: 357 EMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRT--SLIDMY 414
Query: 149 VKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
K IE A ++F + + SWN M+ G+ +G+ + + DLF RM
Sbjct: 415 AKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRM 461
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 98/219 (44%), Gaps = 40/219 (18%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N I K G+ A KVFDQM R++ W+ M++GY+K GM+ AR +FD M ERD
Sbjct: 86 NHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVV 145
Query: 108 LWTTMLNGYIECGMIKEA-----------------------------RKLFDGPDAE--- 135
W TM+ GY + G + EA R+L A
Sbjct: 146 SWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQV 205
Query: 136 ------KSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKAL 189
+V ++++ Y K Q+E A+R F EM + W ++ GY + G +E A
Sbjct: 206 LVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAE 265
Query: 190 DLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
LF M PE+N VSW +I VR G A F +M
Sbjct: 266 KLFCEM--PEKNPVSWTALIAGYVRQGSGNRALDLFRKM 302
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 13/211 (6%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
L + +++C ++ K+G+ H + L + +I Y+KCG +A K+FD
Sbjct: 49 LASLLQQCGD--TKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFD 106
Query: 100 QMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
QM R+ W M++GY++ GM+ AR +FD E+ V +W+TMV GY + + EA
Sbjct: 107 QMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSM-PERDVVSWNTMVIGYAQDGNLHEA-L 164
Query: 160 LFYEMPERKDVSWN-IMMGGYGQNGQIEKALDLFRR------MPEPERNVVSWNTIIKAL 212
FY+ R + +N G + L L R+ + NVV +II A
Sbjct: 165 WFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAY 224
Query: 213 VRCGRIEDAQWHFNQMQERERDVSSWTTIVD 243
+CG++E A+ F++M +D+ WTT++
Sbjct: 225 AKCGQMESAKRCFDEMT--VKDIHIWTTLIS 253
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 106/243 (43%), Gaps = 48/243 (19%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL 108
S I K G+ + A++ FD+M +D+ +W T+I+GY K G ++ A KLF +M E++
Sbjct: 219 SIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVS 278
Query: 109 WTTMLNGYIECGMIKEARKLFD-------GPD---------AEKSVSTW----------- 141
WT ++ GY+ G A LF P+ A S+++
Sbjct: 279 WTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMI 338
Query: 142 -----------STMVNGYVKINQIEEAERLFYEMPERKD-VSWNIMMGGYGQNGQIEKAL 189
S++++ Y K +E +ER+F ++ D V WN M+ Q+G KAL
Sbjct: 339 RTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKAL 398
Query: 190 ----DLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERER---DVSSWTTIV 242
D+ + +P R + I+ A G +E+ F M + D + ++
Sbjct: 399 RMLDDMIKFRVQPNRTTLV--VILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLI 456
Query: 243 DCL 245
D L
Sbjct: 457 DLL 459
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 113/248 (45%), Gaps = 48/248 (19%)
Query: 23 LIHGYPFLRTRLASTFSLN-TEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTM 81
L+HGY A L+ + + I K GR AR VFD M +++ W+TM
Sbjct: 94 LLHGY-------ACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTM 146
Query: 82 INGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD----------- 130
I+GY++ G + A K+FD+M ERD WT M+NG+++ G +EA F
Sbjct: 147 IDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDY 206
Query: 131 ---------------------------GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYE 163
D + +V +++++ Y + +E A ++FY
Sbjct: 207 VAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYN 266
Query: 164 MPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDA 221
M +R VSWN ++ G+ NG ++L FR+M E + + V++ + A G +E+
Sbjct: 267 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG 326
Query: 222 QWHFNQMQ 229
+F M+
Sbjct: 327 LRYFQIMK 334
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 18/165 (10%)
Query: 78 WDTMINGYIKCGMIKEARKLFDQM----AERDTRLWTTMLNGYIECGMIKEARK----LF 129
W + IN + G + EA K F M E + + +L+G CG + L
Sbjct: 39 WTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSG---CGDFTSGSEALGDLL 95
Query: 130 DGPDAE-----KSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQ 184
G + V + ++ Y K + ++A +F M ++ V+WN M+ GY ++GQ
Sbjct: 96 HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQ 155
Query: 185 IEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
++ A +F +M PER+++SW +I V+ G E+A F +MQ
Sbjct: 156 VDNAAKMFDKM--PERDLISWTAMINGFVKKGYQEEALLWFREMQ 198
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 14/155 (9%)
Query: 99 DQMAERDTRLWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIE 155
+Q T WT+ +N G + EA K F E + T+ +++G
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 156 EA-ERLFYEMPERKDVSWNIMMGG------YGQNGQIEKALDLFRRMPEPERNVVSWNTI 208
EA L + + + N +M G Y + G+ +KA +F M + +N V+WNT+
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMED--KNSVTWNTM 146
Query: 209 IKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVD 243
I +R G++++A F++M ERD+ SWT +++
Sbjct: 147 IDGYMRSGQVDNAAKMFDKMP--ERDLISWTAMIN 179
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 97/176 (55%), Gaps = 14/176 (7%)
Query: 77 LWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEK 136
+W+ ++ Y KCG + +ARK+FD+M RD W M+NGY E G+++EARKLFD EK
Sbjct: 122 IWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFD-EMTEK 180
Query: 137 SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP 196
+W+ MV GYVK +Q EEA L+ M + NI A+ RR
Sbjct: 181 DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFT--VSIAVAAAAAVKCIRRGK 238
Query: 197 EPERNVVS---------WNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVD 243
E ++V W++++ +CG I++A+ F+++ E+DV SWT+++D
Sbjct: 239 EIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIV--EKDVVSWTSMID 292
Score = 100 bits (250), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 104/189 (55%), Gaps = 10/189 (5%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N + K G ARKVFD+MP RD+ W+ M+NGY + G+++EARKLFD+M E+D+
Sbjct: 124 NRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSY 183
Query: 108 LWTTMLNGYIECGMIKEARKLFD----GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYE 163
WT M+ GY++ +EA L+ P++ ++ T S V + I + +
Sbjct: 184 SWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGH 243
Query: 164 MP----ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIE 219
+ + +V W+ +M YG+ G I++A ++F ++ E++VVSW ++I + R
Sbjct: 244 IVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI--VEKDVVSWTSMIDRYFKSSRWR 301
Query: 220 DAQWHFNQM 228
+ F+++
Sbjct: 302 EGFSLFSEL 310
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 47/219 (21%)
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD- 130
+ D LW ++++ Y KCG I EAR +FD++ E+D WT+M++ Y + +E LF
Sbjct: 250 DSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSE 309
Query: 131 ------------------------GPDAEKSVSTW-------------STMVNGYVKINQ 153
+ K V + S++V+ Y K
Sbjct: 310 LVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGN 369
Query: 154 IEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLF----RRMPEPERNVVSWNTII 209
IE A+ + P+ VSW ++GG QNGQ ++AL F + +P+ V++ ++
Sbjct: 370 IESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDH--VTFVNVL 427
Query: 210 KALVRCGRIEDAQWHFNQMQERER---DVSSWTTIVDCL 245
A G +E F + E+ R +T +VD L
Sbjct: 428 SACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLL 466
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 104/260 (40%), Gaps = 82/260 (31%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA----- 102
N ++ + G + ARK+FD+M E+D W M+ GY+K +EA L+ M
Sbjct: 155 NVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNS 214
Query: 103 -----------------------------------ERDTRLWTTMLNGYIECGMIKEARK 127
+ D LW+++++ Y +CG I EAR
Sbjct: 215 RPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARN 274
Query: 128 LFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMP---ERKD--------------- 169
+FD EK V +W++M++ Y K ++ E LF E+ ER +
Sbjct: 275 IFD-KIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLT 333
Query: 170 ---------------------VSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTI 208
+ + ++ Y + G IE A + P+P ++VSW ++
Sbjct: 334 TEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKP--DLVSWTSL 391
Query: 209 IKALVRCGRIEDAQWHFNQM 228
I + G+ ++A +F+ +
Sbjct: 392 IGGCAQNGQPDEALKYFDLL 411
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 99/198 (50%), Gaps = 11/198 (5%)
Query: 44 MKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM-- 101
+ R S I+ L K GR AR+VFD MPE D W+TM+ Y + G+ +EA LF Q+
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 102 --AERDTRLWTTMLNGYIECGMIKEARK---LFDGPDAEKSVSTWSTMVNGYVKINQIEE 156
A+ D +T +L+ G +K RK L S+ +++++ Y K +
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLS 123
Query: 157 AERLFYEM--PERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVR 214
A ++F +M R +V+W ++ Y Q E ALD+F M P+R +WN +I
Sbjct: 124 ANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEM--PKRVAFAWNIMISGHAH 181
Query: 215 CGRIEDAQWHFNQMQERE 232
CG++E F +M E E
Sbjct: 182 CGKLESCLSLFKEMLESE 199
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 14/182 (7%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGY-- 116
A VF +MP+R W+ MI+G+ CG ++ LF +M E D +++++N
Sbjct: 157 ALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSA 216
Query: 117 ----IECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSW 172
+ G + A L +G + +V +++++ Y K+ ++A R + VSW
Sbjct: 217 DSSNVVYGRMVHAVMLKNGWSS--AVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSW 274
Query: 173 NIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE 232
N ++ + G+ EKAL++F PE+N+V+W T+I R G E A F +M +
Sbjct: 275 NSIIDACMKIGETEKALEVFHL--APEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSG 332
Query: 233 RD 234
D
Sbjct: 333 VD 334
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 14/209 (6%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM----AE 103
NS I K G T+ A +VF PE+++ W TMI GY + G ++A + F +M +
Sbjct: 275 NSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVD 334
Query: 104 RDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWS----TMVNGYVKINQIEEAER 159
D + +L+ ++ K+ G ++ +VN Y K I+EA+R
Sbjct: 335 SDHFAYGAVLHACSGLALLGHG-KMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADR 393
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGR 217
F ++ + VSWN M+ +G +G ++AL L+ M + + V++ ++ G
Sbjct: 394 AFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGL 453
Query: 218 IEDAQWHFNQMQERER---DVSSWTTIVD 243
+E+ F M + R +V T ++D
Sbjct: 454 VEEGCMIFESMVKDYRIPLEVDHVTCMID 482
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 32/181 (17%)
Query: 79 DTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG------- 131
+ ++N Y KCG IKEA + F +A +D W TML + G+ +A KL+D
Sbjct: 376 NALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIK 435
Query: 132 PDAEKSVSTWSTMVNGYVKINQIEEAERLF------YEMPERKDVSWNIMMGGYGQNGQI 185
PD + +T + + +EE +F Y +P D M+ +G+ G +
Sbjct: 436 PDNVTFIGLLTTCSHSGL----VEEGCMIFESMVKDYRIPLEVD-HVTCMIDMFGRGGHL 490
Query: 186 EKALDL---FRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+A DL + + N SW T++ A WH E R+VS I
Sbjct: 491 AEAKDLATTYSSLVTDSSNNSSWETLLGAC-------STHWH----TELGREVSKVLKIA 539
Query: 243 D 243
+
Sbjct: 540 E 540
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 16/206 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQM--PERDMRLWDTMINGYIKCGMIKEARKLFDQMAERD 105
NS I K T A KVF M R+ W +++ Y+ + A +F +M +R
Sbjct: 109 NSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRV 168
Query: 106 TRLWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIEEAERLFY 162
W M++G+ CG ++ LF + + T+S+++N + R+ +
Sbjct: 169 AFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVH 228
Query: 163 EMPERKDVSW-----NIMMGGYGQNGQIEKALDLFRRMPEPE-RNVVSWNTIIKALVRCG 216
+ + S N ++ Y + G + A+ R + E VSWN+II A ++ G
Sbjct: 229 AVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAM---RELESIEVLTQVSWNSIIDACMKIG 285
Query: 217 RIEDAQWHFNQMQERERDVSSWTTIV 242
E A F+ E+++ +WTT++
Sbjct: 286 ETEKALEVFHLAP--EKNIVTWTTMI 309
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 116/191 (60%), Gaps = 17/191 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
++ I+ L K G+ D A ++FD+M ER D+ ++ +I+G++K K A +L+D++ E
Sbjct: 188 STVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLE 247
Query: 104 R-----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIE 155
+ + M++G +CG + + K+++ + EK + T+S++++G ++
Sbjct: 248 DSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVD 307
Query: 156 EAERLFYEMPERKD----VSWNIMMGGYGQNGQIEKALDLFRRMPEPER-NVVSWNTIIK 210
+AE +F E+ ERK V++N M+GG+ + G+I+++L+L+R M N+VS+N +IK
Sbjct: 308 KAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIK 367
Query: 211 ALVRCGRIEDA 221
L+ G+I++A
Sbjct: 368 GLLENGKIDEA 378
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 130/286 (45%), Gaps = 46/286 (16%)
Query: 2 AKKLPPLSFILMHA---HKLNTHPLIHGYPFLR----TRLASTFSLNTEMKR-----CN- 48
++K P +F L + H H + + LR TR+ + S E+ R C+
Sbjct: 19 SEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDE 78
Query: 49 ----SFISRLCKEGRTDHARKVFDQM-----PERDMRLWDTMINGYIKCGMIKEARKLFD 99
S I K D A VF +M E +R ++T++N +++ + LF
Sbjct: 79 DVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFA 138
Query: 100 QM----AERDTRLWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTMVNGY 148
+ + + ++ + ++AR D PD V ++ST++N
Sbjct: 139 YFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPD----VFSYSTVINDL 194
Query: 149 VKINQIEEAERLFYEMPERK---DVS-WNIMMGGYGQNGQIEKALDLFRRMPEPER---N 201
K ++++A LF EM ER DV+ +NI++ G+ + + A++L+ R+ E N
Sbjct: 195 AKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPN 254
Query: 202 VVSWNTIIKALVRCGRIEDAQ--WHFNQMQERERDVSSWTTIVDCL 245
V + N +I L +CGR++D W + ERE+D+ ++++++ L
Sbjct: 255 VKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGL 300
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 79/133 (59%), Gaps = 1/133 (0%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMI 122
ARKVF +MPER+ W ++ Y+K G ++EA+ +FD M ER+ W +++G ++ G +
Sbjct: 164 ARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDL 223
Query: 123 KEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQN 182
A+KLFD ++ + ++++M++GY K + A LF E +W+ ++ GY QN
Sbjct: 224 VNAKKLFD-EMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQN 282
Query: 183 GQIEKALDLFRRM 195
GQ +A +F M
Sbjct: 283 GQPNEAFKVFSEM 295
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 94/159 (59%), Gaps = 7/159 (4%)
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG 131
++D+ + + ++ Y KC + ARK+F +M ER+ WT ++ Y++ G ++EA+ +FD
Sbjct: 142 DKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFD- 200
Query: 132 PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDL 191
E+++ +W+ +V+G VK + A++LF EMP+R +S+ M+ GY + G + A DL
Sbjct: 201 LMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDL 260
Query: 192 FRRMPEPER--NVVSWNTIIKALVRCGRIEDAQWHFNQM 228
F E R +V +W+ +I + G+ +A F++M
Sbjct: 261 F----EEARGVDVRAWSALILGYAQNGQPNEAFKVFSEM 295
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 112/211 (53%), Gaps = 26/211 (12%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
+ + K G + A+ +FD MPER++ W+ +++G +K G + A+KLFD+M +RD
Sbjct: 180 TALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDII 239
Query: 108 LWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM 164
+T+M++GY + G + AR LF+ G D V WS ++ GY + Q EA ++F EM
Sbjct: 240 SYTSMIDGYAKGGDMVSARDLFEEARGVD----VRAWSALILGYAQNGQPNEAFKVFSEM 295
Query: 165 PERKDVSWNIMMGGY----GQNGQIE--KALD--LFRRMPEPERNVVSWNTIIKALV--- 213
+ +M G Q G E + +D L +RM N S + ++ AL+
Sbjct: 296 CAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRM-----NKFSSHYVVPALIDMN 350
Query: 214 -RCGRIEDAQWHFNQMQERERDVSSWTTIVD 243
+CG ++ A F +M +RD+ S+ ++++
Sbjct: 351 AKCGHMDRAAKLFEEMP--QRDLVSYCSMME 379
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 98/188 (52%), Gaps = 16/188 (8%)
Query: 66 VFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM-----AERDTRLWTTML-----NG 115
VF+++P LW+ +I GY + E + +M A D + ++ NG
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 116 YIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIM 175
+ G L G D K V ++ V+ Y K + A ++F EMPER VSW +
Sbjct: 125 QVRVGSSVHGLVLRIGFD--KDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTAL 182
Query: 176 MGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDV 235
+ Y ++G++E+A +F M PERN+ SWN ++ LV+ G + +A+ F++M +RD+
Sbjct: 183 VVAYVKSGELEEAKSMFDLM--PERNLGSWNALVDGLVKSGDLVNAKKLFDEMP--KRDI 238
Query: 236 SSWTTIVD 243
S+T+++D
Sbjct: 239 ISYTSMID 246
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 114/244 (46%), Gaps = 48/244 (19%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ + L K G +A+K+FD+MP+RD+ + +MI+GY K G + AR LF++ D R
Sbjct: 211 NALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVR 270
Query: 108 LWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTM-----------VNGYV 149
W+ ++ GY + G EA K+F PD V S V+ Y+
Sbjct: 271 AWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYL 330
Query: 150 ---------------------KINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKA 188
K ++ A +LF EMP+R VS+ MM G +G +A
Sbjct: 331 HQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEA 390
Query: 189 LDLFRRMPE----PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSS---WTTI 241
+ LF +M + P+ V++ I+K + +E+ +F M+++ ++S ++ I
Sbjct: 391 IRLFEKMVDEGIVPDE--VAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCI 448
Query: 242 VDCL 245
V+ L
Sbjct: 449 VNLL 452
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 81/140 (57%), Gaps = 5/140 (3%)
Query: 103 ERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFY 162
++D + T+ ++ Y +C + ARK+F G E++ +W+ +V YVK ++EEA+ +F
Sbjct: 142 DKDVVVGTSFVDFYGKCKDLFSARKVF-GEMPERNAVSWTALVVAYVKSGELEEAKSMFD 200
Query: 163 EMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQ 222
MPER SWN ++ G ++G + A LF M P+R+++S+ ++I + G + A+
Sbjct: 201 LMPERNLGSWNALVDGLVKSGDLVNAKKLFDEM--PKRDIISYTSMIDGYAKGGDMVSAR 258
Query: 223 WHFNQMQERERDVSSWTTIV 242
F + R DV +W+ ++
Sbjct: 259 DLFE--EARGVDVRAWSALI 276
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 13/179 (7%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER---- 104
+ I K G D A K+F++MP+RD+ + +M+ G G EA +LF++M +
Sbjct: 345 ALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVP 404
Query: 105 DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVST----WSTMVNGYVKINQIEEAERL 160
D +T +L + +++E + F+ + S+ +S +VN + +++EA L
Sbjct: 405 DEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYEL 464
Query: 161 FYEMP-ERKDVSWNIMMGGYGQNGQIE----KALDLFRRMPEPERNVVSWNTIIKALVR 214
MP E +W ++GG +G E A LF P+ + V + I AL R
Sbjct: 465 IKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDR 523
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 116/245 (47%), Gaps = 57/245 (23%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N I+ K + A ++FDQMP+R++ W TMI+ Y KC + ++A +L M + R
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 108 ----LWTTML---NG-----YIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIE 155
++++L NG + CG+IKE E V S +++ + K+ + E
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRMLHCGIIKEG--------LESDVFVRSALIDVFAKLGEPE 211
Query: 156 EAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP----------------- 198
+A +F EM + WN ++GG+ QN + + AL+LF+RM
Sbjct: 212 DALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACT 271
Query: 199 ------------------ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTT 240
+++++ N ++ +CG +EDA FNQM +ERDV +W+T
Sbjct: 272 GLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQM--KERDVITWST 329
Query: 241 IVDCL 245
++ L
Sbjct: 330 MISGL 334
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 93/187 (49%), Gaps = 16/187 (8%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKV-FDQMPERDMRLWDTMINGYIKCGMIK 92
+A +L + ++ C L + G H V +DQ D+ L + +++ Y KCG ++
Sbjct: 257 IAEQATLTSVLRACTGL--ALLELGMQAHVHIVKYDQ----DLILNNALVDMYCKCGSLE 310
Query: 93 EARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKIN 152
+A ++F+QM ERD W+TM++G + G +EA KLF+ + + + T+V +
Sbjct: 311 DALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACS 370
Query: 153 Q---IEEAERLFYEMPERKDVS-----WNIMMGGYGQNGQIEKALDLFRRMPEPERNVVS 204
+E+ F M + + + M+ G+ G+++ A+ L M E E + V+
Sbjct: 371 HAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEM-ECEPDAVT 429
Query: 205 WNTIIKA 211
W T++ A
Sbjct: 430 WRTLLGA 436
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 114/260 (43%), Gaps = 58/260 (22%)
Query: 21 HPLIHGYPFLRTRLASTFSLN---------------TEMKRCNSFISRLCKEGRTDHARK 65
+P + +PFL A SL+ +++ NS I G D A K
Sbjct: 128 YPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACK 187
Query: 66 VFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR------------------ 107
VF + E+D+ W++MING+++ G +A +LF +M D +
Sbjct: 188 VFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRN 247
Query: 108 ---------------------LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVN 146
L ML+ Y +CG I++A++LFD + EK TW+TM++
Sbjct: 248 LEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLD 306
Query: 147 GYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWN 206
GY E A + MP++ V+WN ++ Y QNG+ +AL +F + + ++
Sbjct: 307 GYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQI 366
Query: 207 TIIKALVRC---GRIEDAQW 223
T++ L C G +E +W
Sbjct: 367 TLVSTLSACAQVGALELGRW 386
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 110/250 (44%), Gaps = 44/250 (17%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
+N + N+ + K G + A+++FD M E+D W TM++GY + AR++ +
Sbjct: 263 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN 322
Query: 100 QMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKS--------VST----------- 140
M ++D W +++ Y + G EA +F +K+ VST
Sbjct: 323 SMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALE 382
Query: 141 ---W-----------------STMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYG 180
W S +++ Y K +E++ +F + +R W+ M+GG
Sbjct: 383 LGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLA 442
Query: 181 QNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSS- 237
+G +A+D+F +M E + N V++ + A G +++A+ F+QM+ V
Sbjct: 443 MHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEE 502
Query: 238 --WTTIVDCL 245
+ IVD L
Sbjct: 503 KHYACIVDVL 512
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 73/148 (49%), Gaps = 13/148 (8%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF---D 130
+ + +I+ Y KCG ++++R++F+ + +RD +W+ M+ G G EA +F
Sbjct: 399 NFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQ 458
Query: 131 GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM-------PERKDVSWNIMMGGYGQNG 183
+ + + T++ + ++EAE LF++M PE K + ++ G++G
Sbjct: 459 EANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKH--YACIVDVLGRSG 516
Query: 184 QIEKALDLFRRMPEPERNVVSWNTIIKA 211
+EKA+ MP P V W ++ A
Sbjct: 517 YLEKAVKFIEAMPIPPSTSV-WGALLGA 543
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 92/157 (58%), Gaps = 9/157 (5%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF---D 130
D+ + +++++ Y KCG +++ARK+FD + +D W +M+ GY + G +A +LF
Sbjct: 386 DVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQ 445
Query: 131 GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMP-----ERKDVSWNIMMGGYGQNGQI 185
+ ++ TW+TM++GY+K EA LF M +R +WN+++ GY QNG+
Sbjct: 446 DANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKK 505
Query: 186 EKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQ 222
++AL+LFR+M + R + + TI+ L C + A+
Sbjct: 506 DEALELFRKM-QFSRFMPNSVTILSLLPACANLLGAK 541
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 51/232 (21%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPE----RDMRLWDTMINGYIKCGMIKEA----RKLF- 98
N I + G+ D A + +M D+ W MI+G I GM +A RK+F
Sbjct: 286 NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFL 345
Query: 99 -----------------------DQMAE-----------RDTRLWTTMLNGYIECGMIKE 124
+Q +E D + ++++ Y +CG +++
Sbjct: 346 AGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLED 405
Query: 125 ARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK----DVSWNIMMGGYG 180
ARK+FD K V TW++M+ GY + +A LF M + ++WN M+ GY
Sbjct: 406 ARKVFDSVK-NKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYI 464
Query: 181 QNGQIEKALDLFRRMPEP---ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
+NG +A+DLF+RM + +RN +WN II ++ G+ ++A F +MQ
Sbjct: 465 KNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQ 516
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 19/211 (9%)
Query: 50 FISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER----D 105
+S K G ARKVFD M ER++ W MI Y + +E KLF M + D
Sbjct: 121 LLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPD 180
Query: 106 TRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNG----YVKINQIEEAERLF 161
L+ +L G CG + EA K+ + +S+ + N Y K +++ A + F
Sbjct: 181 DFLFPKILQGCANCGDV-EAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFF 239
Query: 162 YEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIE 219
M ER ++WN ++ Y QNG+ E+A++L + M + +V+WN +I + G+ +
Sbjct: 240 RRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCD 299
Query: 220 DAQWHFNQMQERE-----RDVSSWTTIVDCL 245
A + MQ+ E DV +WT ++ L
Sbjct: 300 AA---MDLMQKMETFGITADVFTWTAMISGL 327
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 51/246 (20%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQM-- 101
NS + C+ G+ + A ++ +M + + W+ +I GY + G A L +M
Sbjct: 251 NSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMET 310
Query: 102 --AERDTRLWTTMLNGYIECGMIKEA----RKLFDG---PDAEKSVSTWS---------- 142
D WT M++G I GM +A RK+F P+A +S S
Sbjct: 311 FGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQ 370
Query: 143 ---------------------TMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQ 181
++V+ Y K ++E+A ++F + + +WN M+ GY Q
Sbjct: 371 GSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQ 430
Query: 182 NGQIEKALDLFRRMPEPER--NVVSWNTIIKALVRCGRIEDAQWHFNQMQER---ERDVS 236
G KA +LF RM + N+++WNT+I ++ G +A F +M++ +R+ +
Sbjct: 431 AGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTA 490
Query: 237 SWTTIV 242
+W I+
Sbjct: 491 TWNLII 496
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 102/236 (43%), Gaps = 53/236 (22%)
Query: 41 NTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARK 96
N ++ NS I+ C+ G A ++F +M + ++R W+TMI+GYIK G EA
Sbjct: 415 NKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMD 474
Query: 97 LFDQM-----AERDTRLWTTMLNGYIECGMIKEARKLFDG-------PDAEKSVSTW--- 141
LF +M +R+T W ++ GYI+ G EA +LF P++ +S
Sbjct: 475 LFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPAC 534
Query: 142 ----------------------------STMVNGYVKINQIEEAERLFYEMPERKDVSWN 173
+ + + Y K IE + +F M + ++WN
Sbjct: 535 ANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWN 594
Query: 174 IMMGGYGQNGQIEKALDLFRRMP----EPERNVVSWNTIIKALVRCGRIEDAQWHF 225
++GGY +G AL LF +M P R +S +II A G +++ + F
Sbjct: 595 SLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLS--SIILAHGLMGNVDEGKKVF 648
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 46/212 (21%)
Query: 75 MRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDA 134
+R+ ++++ Y KCG + A K F +M ERD W ++L Y + G +EA +L +
Sbjct: 216 LRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEK 275
Query: 135 EK---SVSTWSTMVNGYVKINQIEEAERLFYEMPE---RKDV-SWNIMMGGYGQNGQIEK 187
E + TW+ ++ GY ++ + + A L +M DV +W M+ G NG +
Sbjct: 276 EGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQ 335
Query: 188 ALDLFRRM------PEPER-------------------------------NVVSWNTIIK 210
ALD+FR+M P +V+ N+++
Sbjct: 336 ALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVD 395
Query: 211 ALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+CG++EDA+ F+ + + +DV +W +++
Sbjct: 396 MYSKCGKLEDARKVFDSV--KNKDVYTWNSMI 425
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 111/227 (48%), Gaps = 46/227 (20%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM------- 101
S ++ CK G ++A VFD+M E+D+ W+ +I+GY++ G++++A + M
Sbjct: 314 SLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKY 373
Query: 102 --------------------------------AERDTRLWTTMLNGYIECGMIKEARKLF 129
E D L +T+++ Y +CG I +A+K+F
Sbjct: 374 DCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVF 433
Query: 130 DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQI 185
D EK + W+T++ Y + EA RLFY M ++WN+++ +NGQ+
Sbjct: 434 DST-VEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQV 492
Query: 186 EKALDLFRRMPEPE--RNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
++A D+F +M N++SW T++ +V+ G E+A +MQE
Sbjct: 493 DEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQE 539
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 43/230 (18%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
+EG+ HA + + M E D L +++N Y K G+I+ A +FD+M E+D W +++G
Sbjct: 291 EEGKQSHAIAIVNGM-ELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISG 349
Query: 116 YIECGMIKEA-----------------------------RKLFDGPDA---------EKS 137
Y++ G++++A L G + E
Sbjct: 350 YVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESD 409
Query: 138 VSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM-- 195
+ ST+++ Y K I +A+++F E+ + WN ++ Y ++G +AL LF M
Sbjct: 410 IVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQL 469
Query: 196 PEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE--RDVSSWTTIVD 243
NV++WN II +L+R G++++A+ F QMQ ++ SWTT+++
Sbjct: 470 EGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMN 519
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 96/170 (56%), Gaps = 13/170 (7%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERD---TRL-WTT 111
K G D A KVFD++P+R+ W+ ++ GY++ G +EA +LF M ++ TR+ +T
Sbjct: 220 KCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVST 279
Query: 112 MLNGYIECGMIKEARK-----LFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPE 166
L+ G ++E ++ + +G + + + T +++N Y K+ IE AE +F M E
Sbjct: 280 CLSASANMGGVEEGKQSHAIAIVNGMELDNILGT--SLLNFYCKVGLIEYAEMVFDRMFE 337
Query: 167 RKDVSWNIMMGGYGQNGQIEKALDL--FRRMPEPERNVVSWNTIIKALVR 214
+ V+WN+++ GY Q G +E A+ + R+ + + + V+ T++ A R
Sbjct: 338 KDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAAR 387
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 35/193 (18%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF 98
S +++ ++ + K G A+KVFD E+D+ LW+T++ Y + G+ EA +LF
Sbjct: 405 SFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLF 464
Query: 99 DQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAE 158
+ L G +V TW+ ++ ++ Q++EA+
Sbjct: 465 ----------YGMQLEG------------------VPPNVITWNLIILSLLRNGQVDEAK 496
Query: 159 RLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVR 214
+F +M +SW MM G QNG E+A+ R+M E ++ +I AL
Sbjct: 497 DMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAF-SITVALSA 555
Query: 215 CGRIEDAQWHFNQ 227
C + A H +
Sbjct: 556 CAHL--ASLHIGR 566
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTML-NGYIECGM 121
A +F ++ R++ W +I + G+ + A F +M E + ++ N CG
Sbjct: 126 AEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGA 185
Query: 122 IKEAR------KLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIM 175
+K +R E V S++ + Y K +++A ++F E+P+R V+WN +
Sbjct: 186 LKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNAL 245
Query: 176 MGGYGQNGQIEKALDLFRRM----PEPERNVVSWNTIIKALVRCGRIEDAQ 222
M GY QNG+ E+A+ LF M EP R VS T + A G +E+ +
Sbjct: 246 MVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVS--TCLSASANMGGVEEGK 294
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 36 STFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEAR 95
+ FS+ + C S GRT H + + + + ++++ Y KCG I +A
Sbjct: 545 NAFSITVALSACAHLAS--LHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAE 602
Query: 96 KLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKIN 152
K+F + L M++ Y G +KEA L+ +G + T + +++
Sbjct: 603 KVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAG 662
Query: 153 QIEEAERLFYEMPERKDVS-----WNIMMGGYGQNGQIEKALDLFRRMP 196
I +A +F ++ ++ + + +M+ G+ EKAL L MP
Sbjct: 663 DINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMP 711
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 112/209 (53%), Gaps = 17/209 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
+S IS LC GR A ++ M ER D+ + +I+ ++K G + EA KL+D+M +
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
R +++++NG+ + EA+++F+ V T++T++ G+ K ++EE
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEE 414
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIK 210
+F EM +R V++NI++ G Q G + A ++F+ M N++++NT++
Sbjct: 415 GMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD 474
Query: 211 ALVRCGRIEDAQWHFNQMQERERDVSSWT 239
L + G++E A F +Q + + + +T
Sbjct: 475 GLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 115/217 (52%), Gaps = 19/217 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ I LCK D A +F +M + +R + ++I+ G +A +L M E
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
R D ++ +++ +++ G + EA KL+D + S+ T+S+++NG+ ++++E
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIK 210
A+++F M + V++N ++ G+ + ++E+ +++FR M + N V++N +I+
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 211 ALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
L + G + AQ F +M ++ ++ T++D L
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 111/211 (52%), Gaps = 21/211 (9%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEA 94
S++ + +S I+ C R D A+++F+ M + D+ ++T+I G+ K ++E
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 95 RKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLF-----DGPDAEKSVSTWSTMV 145
++F +M++R +T + ++ G + G A+++F DG ++ T++T++
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG--VPPNIMTYNTLL 473
Query: 146 NGYVKINQIEEAERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLF--RRMPEPE 199
+G K ++E+A +F + K ++NIM+ G + G++E DLF + +
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 533
Query: 200 RNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
+VV++NT+I R G E+A F +M+E
Sbjct: 534 PDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 50 FISRLCKEGRTDHARKVFDQM----PERDMRLWDTMINGYIKCGMIKEARKLFDQM---- 101
I+ C+ + A V +M E ++ +++NGY I EA L DQM
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 102 AERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAE 158
+ +T + T+++G EA L D + + T+ +VNG K + A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 159 RLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKAL 212
L +M + K + +N ++ G + ++ AL+LF+ M NVV+++++I L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 213 VRCGRIEDAQWHFNQMQERE--RDVSSWTTIVD 243
GR DA + M ER+ DV +++ ++D
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALID 334
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 82/163 (50%), Gaps = 15/163 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFD--QM 101
N I L + G D A+++F +M ++ ++T+++G K G +++A +F+ Q
Sbjct: 435 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Query: 102 AERDTRLWT--TMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKINQIEE 156
++ + ++T M+ G + G +++ LF + V ++TM++G+ + EE
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 554
Query: 157 AERLFYEMPERKDV----SWNIMMGGYGQNGQIEKALDLFRRM 195
A+ LF EM E + +N ++ ++G E + +L + M
Sbjct: 555 ADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 109/215 (50%), Gaps = 20/215 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA----E 103
+ FI+ CK G ++ARKVFD+ PER + W+ +I G G EA ++F M E
Sbjct: 156 SGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLE 215
Query: 104 RDTRLWTTMLNGYIECGMIKEARKLF-------DGPDAEKS-VSTWSTMVNGYVKINQIE 155
D TM++ CG + + F EKS + +++++ Y K +++
Sbjct: 216 PDD---FTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMD 272
Query: 156 EAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWNTIIKALV 213
A +F EM +R VSW+ M+ GY NG +AL+ FR+M E N +++ ++ A V
Sbjct: 273 LASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACV 332
Query: 214 RCGRIEDAQWHFNQMQ---ERERDVSSWTTIVDCL 245
G +E+ + +F M+ E E +S + IVD L
Sbjct: 333 HGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLL 367
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 9/150 (6%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS I K GR D A +F++M +R++ W +MI GY G EA + F QM E R
Sbjct: 259 NSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVR 318
Query: 108 ----LWTTMLNGYIECGMIKEARKLF----DGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
+ +L+ + G+++E + F + E +S + +V+ + Q++EA++
Sbjct: 319 PNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKK 378
Query: 160 LFYEMPERKDV-SWNIMMGGYGQNGQIEKA 188
+ EMP + +V W +MGG + G +E A
Sbjct: 379 VVEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 42/229 (18%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
C + I+ K G AR+VFD+M +RD+ +W+ MI GY + G +K A +LFD M ++
Sbjct: 120 CTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNV 179
Query: 107 RLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMV--------------------- 145
WTT+++G+ + G EA K+F + +KSV V
Sbjct: 180 TSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEG 239
Query: 146 ----NG--------------YVKINQIEEAERLFYEMPERKDV-SWNIMMGGYGQNGQIE 186
NG Y K I+ A+RLF E+ ++++ SWN M+G +G+ +
Sbjct: 240 YARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHD 299
Query: 187 KALDLFRRMP-EPER-NVVSWNTIIKALVRCGRIEDAQWHFNQMQERER 233
+AL LF +M E E+ + V++ ++ A V G + Q F M+E +
Sbjct: 300 EALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHK 348
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 95/181 (52%), Gaps = 9/181 (4%)
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG 131
E D T+I Y K G + AR++FD+M++RD +W M+ GY G +K A +LFD
Sbjct: 114 ESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDS 173
Query: 132 PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWN-----IMMGGYGQNGQIE 186
K+V++W+T+++G+ + EA ++F M + K V N ++ G++E
Sbjct: 174 M-PRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELE 232
Query: 187 --KALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVDC 244
+ L+ + R N+ N I+ +CG I+ A+ F ++ +R++ SW +++
Sbjct: 233 IGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELG-NQRNLCSWNSMIGS 291
Query: 245 L 245
L
Sbjct: 292 L 292
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 42/231 (18%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
F +K + I GR ARKVFD+MPERD W TM++ Y + + A L
Sbjct: 898 FGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSL 957
Query: 98 FDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEA 157
+QM+E++ ++NGY+ G +++A LF+ K + +W+TM+ GY + + EA
Sbjct: 958 ANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPV-KDIISWTTMIKGYSQNKRYREA 1016
Query: 158 ERLFYEMPER-------------------------KDVSWNIMMGG-------------- 178
+FY+M E K+V + G
Sbjct: 1017 IAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDM 1076
Query: 179 YGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
Y + G +E+AL +F + P++N+ WN+II+ L G ++A F +M+
Sbjct: 1077 YSKCGSLERALLVFFNL--PKKNLFCWNSIIEGLAAHGFAQEALKMFAKME 1125
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 117/259 (45%), Gaps = 47/259 (18%)
Query: 29 FLRTRLASTF--SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYI 86
L + LA+ SLN + + N FI+ R D A QM E ++ +++ + G++
Sbjct: 788 LLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFV 847
Query: 87 KCGMIKEARKLFDQMAERDT--------------------------------------RL 108
C + +L+ +M RD+ ++
Sbjct: 848 TCSHPIRSLELYVRML-RDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHVKI 906
Query: 109 WTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK 168
TT+++ Y G I+EARK+FD E+ W+TMV+ Y ++ ++ A L +M E+
Sbjct: 907 QTTLIDFYSATGRIREARKVFD-EMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKN 965
Query: 169 DVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
+ + N ++ GY G +E+A LF +M P ++++SW T+IK + R +A F +M
Sbjct: 966 EATSNCLINGYMGLGNLEQAESLFNQM--PVKDIISWTTMIKGYSQNKRYREAIAVFYKM 1023
Query: 229 QER---ERDVSSWTTIVDC 244
E +V+ T I C
Sbjct: 1024 MEEGIIPDEVTMSTVISAC 1042
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 74/163 (45%), Gaps = 9/163 (5%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPD 133
D+ + +++ Y KCG ++ A +F + +++ W +++ G G +EA K+F +
Sbjct: 1066 DVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKME 1125
Query: 134 AEKSVSTWSTMVNGYVKINQ---IEEAERLFYEMPERKDVSWNI-----MMGGYGQNGQI 185
E T V+ + ++E R++ M + + N+ M+ + + G I
Sbjct: 1126 MESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLI 1185
Query: 186 EKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
+AL+L M E E N V W ++ + A+ FN++
Sbjct: 1186 YEALELIGNM-EFEPNAVIWGALLDGCRIHKNLVIAEIAFNKL 1227
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 106/197 (53%), Gaps = 14/197 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
NS I+ LC GR D A+++ D M + D+ ++T+ING+ K + E KLF +MA+
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 342
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
R DT + T++ GY + G A+++F D+ ++ T+S ++ G ++E+A
Sbjct: 343 RGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALV 402
Query: 160 LFYEMP----ERKDVSWNIMMGGYGQNGQIEKALDLFRRMP--EPERNVVSWNTIIKALV 213
LF M E ++NI++ G + G +E A DLFR + + +VVS+ T+I
Sbjct: 403 LFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFC 462
Query: 214 RCGRIEDAQWHFNQMQE 230
R + + + + +MQE
Sbjct: 463 RKRQWDKSDLLYRKMQE 479
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 104/201 (51%), Gaps = 17/201 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRL----WDTMINGYIKCGMIKEARKLFDQMAE 103
N+ I CK G + A ++FD+M +R +++++ G G +A +L M
Sbjct: 178 NTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVM 237
Query: 104 RD----TRLWTTMLNGYIECGMIKEARKLFDGPD---AEKSVSTWSTMVNGYVKINQIEE 156
RD +T +++ +++ G EA KL++ + V T+++++NG +++E
Sbjct: 238 RDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDE 297
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIK 210
A+++ M + V++N ++ G+ ++ ++++ LFR M + + +++NTII+
Sbjct: 298 AKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQ 357
Query: 211 ALVRCGRIEDAQWHFNQMQER 231
+ GR + AQ F++M R
Sbjct: 358 GYFQAGRPDAAQEIFSRMDSR 378
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 111/224 (49%), Gaps = 19/224 (8%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKE 93
F ++ +S I+ C+ R A + +M E D+ +++T+I+G K G++ +
Sbjct: 133 FGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVND 192
Query: 94 ARKLFDQM----AERDTRLWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVN 146
A +LFD+M D + +++ G G +A +L D +V T++ +++
Sbjct: 193 AVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVID 252
Query: 147 GYVKINQIEEAERLFYEMPER---KDV-SWNIMMGGYGQNGQIEKALDLFRRMPEPE--R 200
+VK + EA +L+ EM R DV ++N ++ G +G++++A + M
Sbjct: 253 VFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 312
Query: 201 NVVSWNTIIKALVRCGRIEDAQWHFNQMQERER--DVSSWTTIV 242
+VV++NT+I + R+++ F +M +R D ++ TI+
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTII 356
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 109/250 (43%), Gaps = 63/250 (25%)
Query: 28 PFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIK 87
PF+RT L + +S C + R+ A++VFD +D+ W++++N Y K
Sbjct: 97 PFVRTSLLNMYSS--------------CGDLRS--AQRVFDDSGSKDLPAWNSVVNAYAK 140
Query: 88 CGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF------------------ 129
G+I +ARKLFD+M ER+ W+ ++NGY+ CG KEA LF
Sbjct: 141 AGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEF 200
Query: 130 -------------------------DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM 164
D E + + +++ Y K +E A+R+F +
Sbjct: 201 TMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL 260
Query: 165 PERKDV-SWNIMMGGYGQNGQIEKALDLFRRMPEPER---NVVSWNTIIKALVRCGRIED 220
+KDV +++ M+ G ++ LF M + N V++ I+ A V G I +
Sbjct: 261 GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINE 320
Query: 221 AQWHFNQMQE 230
+ +F M E
Sbjct: 321 GKSYFKMMIE 330
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 124/251 (49%), Gaps = 32/251 (12%)
Query: 7 PLSFIL-MHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARK 65
P+S L M H+++ P H +PFL + L G+ HA+
Sbjct: 46 PISVYLRMRNHRVS--PDFHTFPFLLPSFHNPLHLPL---------------GQRTHAQI 88
Query: 66 VFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEA 125
+ + ++D + +++N Y CG ++ A+++FD +D W +++N Y + G+I +A
Sbjct: 89 LLFGL-DKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDA 147
Query: 126 RKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK---------DVSWNIMM 176
RKLFD E++V +WS ++NGYV + +EA LF EM K + + + ++
Sbjct: 148 RKLFD-EMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 177 GGYGQNGQIEKA--LDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERD 234
G+ G +E+ + + E ++V +I +CG +E A+ FN + + +D
Sbjct: 207 SACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSK-KD 265
Query: 235 VSSWTTIVDCL 245
V +++ ++ CL
Sbjct: 266 VKAYSAMICCL 276
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 42/216 (19%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYI 117
GR A+KVFD+M ER++ +W+ MI G+ G ++ LF QM+ER W +M++
Sbjct: 151 GRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLS 210
Query: 118 ECGMIKEARKLFD-------GPD--------------------------AEKS------V 138
+CG +EA +LF PD AE S +
Sbjct: 211 KCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFI 270
Query: 139 STWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP 198
+ + +V+ Y K +E A +F +M R VSWN ++ G NG+ E +DLF M E
Sbjct: 271 TVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEE 330
Query: 199 ERNVVSWNTIIKALVRC---GRIEDAQWHFNQMQER 231
+ + T + L C G++E + F M ER
Sbjct: 331 GKVAPNEATFLGVLACCSYTGQVERGEELFGLMMER 366
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 109/243 (44%), Gaps = 27/243 (11%)
Query: 12 LMHAHKLNTH-PLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQM 70
L+H H T P IH + S L + C S +D+A +VF +
Sbjct: 10 LLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSL-------SNSDYANRVFSHI 62
Query: 71 PERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD 130
++ +++ MI Y G E+ F M R +W + Y ++K L D
Sbjct: 63 QNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRG--IWA---DEYTYAPLLKSCSSLSD 117
Query: 131 ---GPDAEKSVSTWSTMVNGYVKINQIE---------EAERLFYEMPERKDVSWNIMMGG 178
G + G ++I +E +A+++F EM ER V WN+M+ G
Sbjct: 118 LRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRG 177
Query: 179 YGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSW 238
+ +G +E+ L LF++M ER++VSWN++I +L +CGR +A F +M ++ D
Sbjct: 178 FCDSGDVERGLHLFKQM--SERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEA 235
Query: 239 TTI 241
T +
Sbjct: 236 TVV 238
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 120/272 (44%), Gaps = 57/272 (20%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
+HG R+ L ++ N+F+ K R AR +FD MP R++ +MI+
Sbjct: 275 VHG------RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMIS 328
Query: 84 GYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD------------- 130
GY K AR +F +MAER+ W ++ GY + G +EA LF
Sbjct: 329 GYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYS 388
Query: 131 ----------------GPDA---------------EKSVSTWSTMVNGYVKINQIEEAER 159
G A E + +++++ YVK +EE
Sbjct: 389 FANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYL 448
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGR 217
+F +M ER VSWN M+ G+ QNG +AL+LFR M E + + ++ ++ A G
Sbjct: 449 VFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGF 508
Query: 218 IEDAQWHFNQMQERERDVS----SWTTIVDCL 245
+E+ + +F+ M R+ V+ +T +VD L
Sbjct: 509 VEEGRHYFSSMT-RDFGVAPLRDHYTCMVDLL 539
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 98/215 (45%), Gaps = 40/215 (18%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N I K G + R+VFD+MP+R++ W++++ G K G + EA LF M ERD
Sbjct: 59 NRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQC 118
Query: 108 LWTTMLNGYIECGMIKEARKLF-----DG------------------PDAEKSVST---- 140
W +M++G+ + +EA F +G D K V
Sbjct: 119 TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLI 178
Query: 141 -----------WSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKAL 189
S +V+ Y K + +A+R+F EM +R VSWN ++ + QNG +AL
Sbjct: 179 AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEAL 238
Query: 190 DLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQ 222
D+F+ M E E + V+ ++I A I+ Q
Sbjct: 239 DVFQMMLESRVEPDEVTLASVISACASLSAIKVGQ 273
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 17/216 (7%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF 98
+L + + C S + K G+ H R V + D+ L + ++ Y KC IKEAR +F
Sbjct: 255 TLASVISACASLSA--IKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIF 312
Query: 99 DQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAE 158
D M R+ T+M++GY K AR +F AE++V +W+ ++ GY + + EEA
Sbjct: 313 DSMPIRNVIAETSMISGYAMAASTKAARLMFTKM-AERNVVSWNALIAGYTQNGENEEAL 371
Query: 159 RLF------------YEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWN 206
LF Y ++ G + F+ E ++ N
Sbjct: 372 SLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGN 431
Query: 207 TIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
++I V+CG +E+ F +M ERD SW ++
Sbjct: 432 SLIDMYVKCGCVEEGYLVFRKMM--ERDCVSWNAMI 465
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 86/171 (50%), Gaps = 40/171 (23%)
Query: 112 MLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS 171
+++ Y +CG +++ R++FD ++++ TW+++V G K+ ++EA+ LF MPER +
Sbjct: 61 LIDAYSKCGSLEDGRQVFDKM-PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCT 119
Query: 172 WNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIKA------------------ 211
WN M+ G+ Q+ + E+AL F M + N S+ +++ A
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 212 -------------LV----RCGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
LV +CG + DAQ F++M +R+V SW +++ C
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG--DRNVVSWNSLITCF 228
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 108/246 (43%), Gaps = 42/246 (17%)
Query: 37 TFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARK 96
+FS +K +F R + G H + + + E + + T+I Y CG ++ ARK
Sbjct: 106 SFSFAFVIKAVENF--RSLRTGFQMHCQALKHGL-ESHLFVGTTLIGMYGGCGCVEFARK 162
Query: 97 LFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEE 156
+FD+M + + W ++ + AR++FD S W+ M+ GY+K ++E
Sbjct: 163 VFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTS-WNVMLAGYIKAGELES 221
Query: 157 AERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP------------------ 198
A+R+F EMP R DVSW+ M+ G NG ++ FR +
Sbjct: 222 AKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQ 281
Query: 199 --------------ERNVVSW-----NTIIKALVRCGRIEDAQWHFNQMQERERDVSSWT 239
E+ SW N +I RCG + A+ F MQE+ R + SWT
Sbjct: 282 SGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEK-RCIVSWT 340
Query: 240 TIVDCL 245
+++ L
Sbjct: 341 SMIAGL 346
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 44/240 (18%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ I+ + AR++FD+M R+ W+ M+ GYIK G ++ A+++F +M RD
Sbjct: 176 NAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDV 235
Query: 108 LWTTMLNGYIECGMIKEARKLFD-------GPD--------------------------A 134
W+TM+ G G E+ F P+
Sbjct: 236 SWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFV 295
Query: 135 EKSVSTWSTMVNG-----YVKINQIEEAERLFYEMPERK-DVSWNIMMGGYGQNGQIEKA 188
EK+ +W VN Y + + A +F M E++ VSW M+ G +GQ E+A
Sbjct: 296 EKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEA 355
Query: 189 LDLFRRMPE--PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ---ERERDVSSWTTIVD 243
+ LF M + +S+ +++ A G IE+ + +F++M+ E ++ + +VD
Sbjct: 356 VRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVD 415
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 91/208 (43%), Gaps = 43/208 (20%)
Query: 62 HARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM-------------------- 101
+AR++ PE D +++T++ GY + + +F +M
Sbjct: 57 YARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAV 116
Query: 102 --------------------AERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTW 141
E + TT++ Y CG ++ ARK+FD + ++ W
Sbjct: 117 ENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFD-EMHQPNLVAW 175
Query: 142 STMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERN 201
+ ++ + N + A +F +M R SWN+M+ GY + G++E A +F M P R+
Sbjct: 176 NAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEM--PHRD 233
Query: 202 VVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
VSW+T+I + G ++ +F ++Q
Sbjct: 234 DVSWSTMIVGIAHNGSFNESFLYFRELQ 261
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 99/254 (38%), Gaps = 80/254 (31%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM------ 101
N ++ K G + A+++F +MP RD W TMI G G E+ F ++
Sbjct: 207 NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMS 266
Query: 102 -------------AERDTRLWTTMLNGYIE--------------------CGMIKEARKL 128
++ + + +L+G++E CG + AR +
Sbjct: 267 PNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLV 326
Query: 129 FDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM------------------------ 164
F+G ++ + +W++M+ G Q EEA RLF EM
Sbjct: 327 FEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGL 386
Query: 165 --------PERKDV--------SWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTI 208
E K V + M+ YG++G+++KA D +MP P +V W T+
Sbjct: 387 IEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIV-WRTL 445
Query: 209 IKALVRCGRIEDAQ 222
+ A G IE A+
Sbjct: 446 LGACSSHGNIELAE 459
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 106/222 (47%), Gaps = 44/222 (19%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
CN+ I ARK+FD+MP +++ W+++++ Y K G + AR +FD+M+ERD
Sbjct: 146 CNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDV 205
Query: 107 RLWTTMLNGYIECGMIKEARKLFD-----GPDAEKSVSTWS------------------- 142
W++M++GY++ G +A ++FD G V+ S
Sbjct: 206 VTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHR 265
Query: 143 ---------------TMVNGYVKINQIEEAERLFY--EMPERKDVSWNIMMGGYGQNGQI 185
++++ Y K I +A +FY + E + WN ++GG +G I
Sbjct: 266 YILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFI 325
Query: 186 EKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHF 225
++L LF +M E + + +++ ++ A G +++A WHF
Sbjct: 326 RESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEA-WHF 366
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 8/181 (4%)
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG 131
E D+ + +T+I+ Y ARKLFD+M ++ W ++L+ Y + G + AR +FD
Sbjct: 140 EWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFD- 198
Query: 132 PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM-----PERKDVSWNIMMGGYGQNGQIE 186
+E+ V TWS+M++GYVK + +A +F +M + +V+ ++ G +
Sbjct: 199 EMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALN 258
Query: 187 KALDLFRRMPEPE--RNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVDC 244
+ + R + + V+ ++I +CG I DA F + +E D W I+
Sbjct: 259 RGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGG 318
Query: 245 L 245
L
Sbjct: 319 L 319
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 43/210 (20%)
Query: 51 ISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA-------- 102
S L G D+A K ++ + W+ +I G+ +++ ++ QM
Sbjct: 49 FSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDH 108
Query: 103 -------ERDTRLWTTMLNGYIECGMIKE------------------------ARKLFDG 131
+ +RL L G + C ++K ARKLFD
Sbjct: 109 MTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFD- 167
Query: 132 PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDL 191
K++ TW+++++ Y K + A +F EM ER V+W+ M+ GY + G+ KAL++
Sbjct: 168 EMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEI 227
Query: 192 FR---RMPEPERNVVSWNTIIKALVRCGRI 218
F RM + N V+ ++I A G +
Sbjct: 228 FDQMMRMGSSKANEVTMVSVICACAHLGAL 257
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 102/194 (52%), Gaps = 14/194 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
N+ + K G D AR VF+ +P D+ W+T+I+GY + G EA ++++ M E
Sbjct: 388 NAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEI 447
Query: 105 --DTRLWTTMLNGYIECGMIKEARKLF-----DGPDAEKSVSTWSTMVNGYVKINQIEEA 157
+ W ++L + G +++ KL +G + V T ++ + Y K ++E+A
Sbjct: 448 AANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVT--SLADMYGKCGRLEDA 505
Query: 158 ERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRC 215
LFY++P V WN ++ +G +G EKA+ LF+ M + + + +++ T++ A
Sbjct: 506 LSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHS 565
Query: 216 GRIEDAQWHFNQMQ 229
G +++ QW F MQ
Sbjct: 566 GLVDEGQWCFEMMQ 579
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 83/167 (49%), Gaps = 7/167 (4%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE 93
LA F ++ S I + +AR +FD+MP RDM W+ MI+GY + G KE
Sbjct: 175 LALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKE 234
Query: 94 ARKLFDQMAERDTRLWTTMLNGYIEC-----GMIKEARKLFDGPDAEKSVSTWSTMVNGY 148
A L + + D+ ++L+ E G+ + + G ++E VS + +++ Y
Sbjct: 235 ALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVS--NKLIDLY 292
Query: 149 VKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
+ ++ + +++F M R +SWN ++ Y N Q +A+ LF+ M
Sbjct: 293 AEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM 339
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 92/240 (38%), Gaps = 58/240 (24%)
Query: 50 FISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM-----AER 104
++ C G AR FD + RD+ W+ MI+GY + G E + F
Sbjct: 92 LVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTP 151
Query: 105 DTRLWTTMLNGYIECGMIKEARKLFDGPD----AEKSVSTW-----STMVNGYVKINQIE 155
D R + ++L K R + DG A K W +++++ Y + +
Sbjct: 152 DYRTFPSVL---------KACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVG 202
Query: 156 EAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDL---FRRMPEP-------------- 198
A LF EMP R SWN M+ GY Q+G ++AL L R M
Sbjct: 203 NARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGD 262
Query: 199 ----------------ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
E + N +I GR+ D Q F++M RD+ SW +I+
Sbjct: 263 FNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMY--VRDLISWNSII 320
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 20/216 (9%)
Query: 15 AHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERD 74
A N IH Y L +E+ N I + GR +KVFD+M RD
Sbjct: 260 AGDFNRGVTIHSYSI-------KHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRD 312
Query: 75 MRLWDTMINGYIKCGMIKEARKLFDQM----AERDTRLWTTMLNGYIECGMIKEARKLFD 130
+ W+++I Y A LF +M + D ++ + + G I+ R +
Sbjct: 313 LISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSV-Q 371
Query: 131 GPDAEKS-----VSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQI 185
G K ++ + +V Y K+ ++ A +F +P +SWN ++ GY QNG
Sbjct: 372 GFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFA 431
Query: 186 EKALDLFRRMPEP---ERNVVSWNTIIKALVRCGRI 218
+A++++ M E N +W +++ A + G +
Sbjct: 432 SEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGAL 467
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 110/241 (45%), Gaps = 43/241 (17%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ + K G AR++FD + +R + W TMI+GY +CG++ +RKLFD M E+D
Sbjct: 296 NALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVV 355
Query: 108 LWTTMLNGYIECGMIKEARKLFD-------GPD--------------------------A 134
LW M+ G ++ ++A LF PD
Sbjct: 356 LWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI 415
Query: 135 EK-----SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKAL 189
EK +V+ +++V+ Y K I EA +F+ + R +++ ++GG +G A+
Sbjct: 416 EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAI 475
Query: 190 DLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER---ERDVSSWTTIVDC 244
F M + + +++ ++ A G I+ + +F+QM+ R + ++ +VD
Sbjct: 476 SYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDL 535
Query: 245 L 245
L
Sbjct: 536 L 536
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 46/222 (20%)
Query: 50 FISRLCKEGRTDHARKVFDQMPERDMRLWDTMING----YIKCGMIKEARKLFDQMAERD 105
+S G + ++ ++ + E +R+ ++N + KCG I EAR++FD + +R
Sbjct: 263 LVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRT 322
Query: 106 TRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMP 165
WTTM++GY CG++ +RKLFD + EK V W+ M+ G V+ + ++A LF EM
Sbjct: 323 IVSWTTMISGYARCGLLDVSRKLFDDME-EKDVVLWNAMIGGSVQAKRGQDALALFQEMQ 381
Query: 166 ----------------------------------ERKDVSWNIMMGG-----YGQNGQIE 186
E+ +S N+ +G Y + G I
Sbjct: 382 TSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNIS 441
Query: 187 KALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
+AL +F + RN +++ II L G A +FN+M
Sbjct: 442 EALSVFHGI--QTRNSLTYTAIIGGLALHGDASTAISYFNEM 481
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 10/205 (4%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ I G ++ARKVFD+ P RD+ W+ +INGY K G ++A ++ M +
Sbjct: 195 NASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVK 254
Query: 108 LWTTMLNGYI-ECGMI------KEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERL 160
+ G + C M+ KE + ++ + +++ + K I EA R+
Sbjct: 255 PDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRI 314
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIED 220
F + +R VSW M+ GY + G ++ + LF M E++VV WN +I V+ R +D
Sbjct: 315 FDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDM--EEKDVVLWNAMIGGSVQAKRGQD 372
Query: 221 AQWHFNQMQERERDVSSWTTIVDCL 245
A F +MQ T++ CL
Sbjct: 373 ALALFQEMQTSNTKPDE-ITMIHCL 396
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 115/207 (55%), Gaps = 21/207 (10%)
Query: 43 EMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLF 98
+++ N+++ + K G + R +F+++ R D R + +I+G IK G E +LF
Sbjct: 516 DLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELF 575
Query: 99 DQMAER----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKI 151
M E+ DTR + +++G+ +CG + +A +L + E +V T+ ++++G KI
Sbjct: 576 YSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKI 635
Query: 152 NQIEEAERLFYEMPERK----DVSWNIMMGGYGQNGQIEKAL----DLFRRMPEPERNVV 203
++++EA LF E ++ V ++ ++ G+G+ G+I++A +L ++ P N+
Sbjct: 636 DRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTP--NLY 693
Query: 204 SWNTIIKALVRCGRIEDAQWHFNQMQE 230
+WN+++ ALV+ I +A F M+E
Sbjct: 694 TWNSLLDALVKAEEINEALVCFQSMKE 720
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 110/214 (51%), Gaps = 19/214 (8%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAER 104
S I L K GR D A KV+++M + D R ++ ++I + G ++ K++ M +
Sbjct: 452 SLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ 511
Query: 105 DTRLWTTMLNGYIEC----GMIKEARKLFDGPDAEKSVS---TWSTMVNGYVKINQIEEA 157
+ +LN Y++C G ++ R +F+ A + V ++S +++G +K E
Sbjct: 512 NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANET 571
Query: 158 ERLFYEMPERKDV----SWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKA 211
LFY M E+ V ++NI++ G+ + G++ KA L M E VV++ ++I
Sbjct: 572 YELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDG 631
Query: 212 LVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVD 243
L + R+++A F + + + E +V +++++D
Sbjct: 632 LAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 665
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 105/215 (48%), Gaps = 18/215 (8%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERD----MRLWDTMINGYIKCGMIKEARKLFDQMA-- 102
+ I +D +F QM E + L+ T+I G+ K G + A L D+M
Sbjct: 173 TLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSS 232
Query: 103 --ERDTRLWTTMLNGYIECGMIKEARKLFDGPDA---EKSVSTWSTMVNGYVKINQIEEA 157
+ D L+ ++ + + G + A K F +A + T+++M+ K N+++EA
Sbjct: 233 SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEA 292
Query: 158 ERLFYEMPERKDV----SWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIKA 211
+F + + + V ++N M+ GYG G+ ++A L R +V+++N I+
Sbjct: 293 VEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTC 352
Query: 212 LVRCGRIEDAQWHFNQM-QERERDVSSWTTIVDCL 245
L + G++++A F +M ++ ++S++ ++D L
Sbjct: 353 LRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDML 387
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 109/215 (50%), Gaps = 19/215 (8%)
Query: 50 FISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMA--- 102
I L K G + ++F M E+ D R ++ +I+G+ KCG + +A +L ++M
Sbjct: 558 LIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617
Query: 103 -ERDTRLWTTMLNGYIECGMIKEARKLFDGPDA---EKSVSTWSTMVNGYVKINQIEEAE 158
E + ++++G + + EA LF+ + E +V +S++++G+ K+ +I+EA
Sbjct: 618 FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAY 677
Query: 159 RLFYEMPERKDV----SWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIKAL 212
+ E+ ++ +WN ++ + +I +AL F+ M E + N V++ +I L
Sbjct: 678 LILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737
Query: 213 VRCGRIEDAQWHFNQMQERERDVS--SWTTIVDCL 245
+ + A + +MQ++ S S+TT++ L
Sbjct: 738 CKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGL 772
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 108/231 (46%), Gaps = 41/231 (17%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N + + G+ AR +FD+MP+R+ W+TMI GY+ G + + FD M ERD
Sbjct: 66 NHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGY 125
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
W +++G+ + G + AR+LF+ EK V T +++++GY+ EEA RLF E+
Sbjct: 126 SWNVVVSGFAKAGELSVARRLFNAM-PEKDVVTLNSLLHGYILNGYAEEALRLFKELNFS 184
Query: 168 KD----------------------VSWNIMMGG--------------YGQNGQIEKALDL 191
D + I++GG Y + G + A +
Sbjct: 185 ADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYM 244
Query: 192 FRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
++ EP+ + S + +I CGR+ +++ F+ ++ R V W +++
Sbjct: 245 LEQIREPDDH--SLSALISGYANCGRVNESRGLFD--RKSNRCVILWNSMI 291
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 44/237 (18%)
Query: 35 ASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEA 94
A F L ++ ++ + K G A K+F ++ D L ++MI Y CG I +A
Sbjct: 344 ACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDA 403
Query: 95 RKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF------DGPDAEKSVSTW------- 141
+++F+++ + W +M NG+ + G E + F D P E S+S+
Sbjct: 404 KRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASI 463
Query: 142 -------------------------STMVNGYVKINQIEEAERLFYEMPERKDVSWNIMM 176
S++++ Y K +E R+F M + +V WN M+
Sbjct: 464 SSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMI 523
Query: 177 GGYGQNGQIEKALDLFRRMP----EPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
GY NGQ +A+DLF++M P + +++ ++ A CG +E+ + F M+
Sbjct: 524 SGYATNGQGFEAIDLFKKMSVAGIRPTQ--ITFMVVLTACNYCGLVEEGRKLFESMK 578
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 106/235 (45%), Gaps = 40/235 (17%)
Query: 35 ASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEA 94
A+ L+++ +S I CK G +H R+VFD M + D W++MI+GY G EA
Sbjct: 476 ATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEA 535
Query: 95 RKLFDQMAERDTR----LWTTMLNGYIECGMIKEARKLFDG--------PDAEKSVSTWS 142
LF +M+ R + +L CG+++E RKLF+ PD E +S
Sbjct: 536 IDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEH----FS 591
Query: 143 TMVNGYVKINQIEEAERLFYEMPERKDVS-WNIMMGGYGQNG-------QIEKALDLFRR 194
MV+ + +EEA L EMP D S W+ ++ G NG EK ++L
Sbjct: 592 CMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIEL--- 648
Query: 195 MPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDV-----SSWTTIVDC 244
EPE N V++ + G E + M RE +V SSWT DC
Sbjct: 649 --EPE-NSVAYVQLSAIFATSGDWESSALVRKLM--RENNVTKNPGSSWT---DC 695
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 17/209 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM---AER 104
++ IS GR + +R +FD+ R + LW++MI+GYI M EA LF++M
Sbjct: 257 SALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETRE 316
Query: 105 DTRLWTTMLNGYIECGMIKEARKL------FDGPDAEKSVSTWSTMVNGYVKINQIEEAE 158
D+R ++N I G ++ +++ F D + ST+++ Y K EA
Sbjct: 317 DSRTLAAVINACIGLGFLETGKQMHCHACKFGLID---DIVVASTLLDMYSKCGSPMEAC 373
Query: 159 RLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRI 218
+LF E+ + N M+ Y G+I+ A +F R+ ++++SWN++ + G
Sbjct: 374 KLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIEN--KSLISWNSMTNGFSQNGCT 431
Query: 219 EDAQWHFNQMQERE---RDVSSWTTIVDC 244
+ +F+QM + + +VS + I C
Sbjct: 432 VETLEYFHQMHKLDLPTDEVSLSSVISAC 460
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 98/202 (48%), Gaps = 10/202 (4%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
+S ++ K G A + +Q+ E D +I+GY CG + E+R LFD+ + R
Sbjct: 226 SSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVI 285
Query: 108 LWTTMLNGYIECGMIKEARKLFDG--PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMP 165
LW +M++GYI M EA LF+ + + T + ++N + + +E +++
Sbjct: 286 LWNSMISGYIANNMKMEALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHAC 345
Query: 166 E----RKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDA 221
+ V + ++ Y + G +A LF + + + N++IK CGRI+DA
Sbjct: 346 KFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEV--ESYDTILLNSMIKVYFSCGRIDDA 403
Query: 222 QWHFNQMQERERDVSSWTTIVD 243
+ F +++ + + SW ++ +
Sbjct: 404 KRVFERIE--NKSLISWNSMTN 423
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 5/134 (3%)
Query: 112 MLNGYIECGMIKEARKLFDG-PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV 170
+L Y G + AR LFD PD ++ +W+TM+ GY+ + + R F MPER
Sbjct: 68 LLQMYSRSGKMGIARNLFDEMPD--RNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGY 125
Query: 171 SWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
SWN+++ G+ + G++ A LF M PE++VV+ N+++ + G E+A F ++
Sbjct: 126 SWNVVVSGFAKAGELSVARRLFNAM--PEKDVVTLNSLLHGYILNGYAEEALRLFKELNF 183
Query: 231 RERDVSSWTTIVDC 244
++ T + C
Sbjct: 184 SADAITLTTVLKAC 197
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 123/285 (43%), Gaps = 82/285 (28%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTD---HARKVFDQMPERDMRLWDTMINGYIKCGMIKEAR 95
S N + + + I L K +D +A KVFD++PE D+ +I ++K EA
Sbjct: 19 SANALVTKSPNSIPELVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEAS 78
Query: 96 KLFDQM--------------------AERDTRLW-------------------TTMLNGY 116
+ F ++ RD +L + +LN Y
Sbjct: 79 QAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCY 138
Query: 117 IECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMM 176
++ + +AR+ FD + +V + + +++GY+K ++ EEA LF MPER V+WN ++
Sbjct: 139 VKLSTLTDARRCFDDTR-DPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVI 197
Query: 177 GGYGQNGQIEKALDLFRRM-------PEPER----------------------------- 200
GG+ Q G+ E+A++ F M P
Sbjct: 198 GGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLG 257
Query: 201 ---NVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
NV WN++I +CG +ED+ FN+++E +R++ SW +++
Sbjct: 258 KRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMI 302
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 109/249 (43%), Gaps = 52/249 (20%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
+H Y L+ LAS + + + C +S L TD AR+ FD + ++ +I+
Sbjct: 115 LHCYA-LKMGLASNVFVGSAVLNCYVKLSTL-----TD-ARRCFDDTRDPNVVSITNLIS 167
Query: 84 GYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF-----DG------- 131
GY+K +EA LF M ER W ++ G+ + G +EA F +G
Sbjct: 168 GYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNES 227
Query: 132 --PDAEKSVS--------------------------TWSTMVNGYVKINQIEEAERLFYE 163
P A ++S W+++++ Y K +E++ F +
Sbjct: 228 TFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNK 287
Query: 164 MPE--RKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRC---GRI 218
+ E R VSWN M+ GY NG+ E+A+ +F +M + + TI+ L C G I
Sbjct: 288 LEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLI 347
Query: 219 EDAQWHFNQ 227
++ +FN+
Sbjct: 348 QEGYMYFNK 356
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 117/213 (54%), Gaps = 19/213 (8%)
Query: 49 SFISRLCKEGR-TDHARKVFDQMPER---DMRLWDTMINGYIKCGMIKEARKLFDQMA-- 102
+ ++ LC R +D AR + D + ++ ++ + +++ ++K G + EA++LF++M
Sbjct: 230 ALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 289
Query: 103 --ERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEA 157
+ D +++++NG I EA ++FD V +++T++NG+ K ++E+
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 349
Query: 158 ERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMP--EPERNVVSWNTIIKA 211
+LF EM +R V++N ++ G+ Q G ++KA + F +M ++ ++N ++
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 212 LVRCGRIEDAQWHFNQMQERER--DVSSWTTIV 242
L G +E A F MQ+RE D+ ++TT++
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 113/209 (54%), Gaps = 17/209 (8%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEA 94
S++ ++ +S I+ LC R D A ++FD M + D+ ++T+ING+ K +++
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 349
Query: 95 RKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPD---AEKSVSTWSTMVNG 147
KLF +M++R +T + T++ G+ + G + +A++ F D + T++ ++ G
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 148 YVKINQIEEAERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLF--RRMPEPERN 201
++E+A +F +M +R+ V++ ++ G + G++E+A LF + + +
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469
Query: 202 VVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
+V++ T++ L G + + + + +M++
Sbjct: 470 IVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 92/179 (51%), Gaps = 15/179 (8%)
Query: 80 TMINGYIKCGMIKEARKLFDQMAE----RDTRLWTTMLNGYIECGMIKEARKLF---DGP 132
+++NG+ + + +A L D+M E D + +++ + + +A F +
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219
Query: 133 DAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK----DVSWNIMMGGYGQNGQIEKA 188
+V T++ +VNG ++ +A RL +M ++K ++++ ++ + +NG++ +A
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA 279
Query: 189 LDLFRRMP--EPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE--RDVSSWTTIVD 243
+LF M + ++V+++++I L RI++A F+ M + DV S+ T+++
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 106/213 (49%), Gaps = 14/213 (6%)
Query: 27 YPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYI 86
Y F+R S +N M ++ + K D A+++FD+ ++ L + M + Y+
Sbjct: 259 YAFIRN---SGIEVNDLM--VSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYV 313
Query: 87 KCGMIKEARKLFDQMAERDTRL-WTTMLNGYIECGMIKEA--RKLFDGPDAEKSVSTWST 143
+ G+ +EA +F+ M + R +ML+ C ++ K G +W
Sbjct: 314 RQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDN 373
Query: 144 MVNG----YVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE 199
+ N Y+K ++ + A R+F M + V+WN ++ GY +NG+++ A + F MPE
Sbjct: 374 ICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE-- 431
Query: 200 RNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE 232
+N+VSWNTII LV+ E+A F MQ +E
Sbjct: 432 KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQE 464
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 93/197 (47%), Gaps = 35/197 (17%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
CN+ I K R D A ++FD+M + + W++++ GY++ G + A + F+ M E++
Sbjct: 375 CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI 434
Query: 107 RLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS----TWSTMVNGYVKINQIEEAERLFY 162
W T+++G ++ + +EA ++F +++ V+ T ++ + + ++ A+ ++Y
Sbjct: 435 VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYY 494
Query: 163 EMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQ 222
+ E+ + ++ +G T++ RCG E A
Sbjct: 495 YI-EKNGIQLDVRLG----------------------------TTLVDMFSRCGDPESAM 525
Query: 223 WHFNQMQERERDVSSWT 239
FN + RDVS+WT
Sbjct: 526 SIFNSLT--NRDVSAWT 540
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 85/192 (44%), Gaps = 25/192 (13%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS + + G D ARKVFD+M ER++ W +MI GY + K+A LF +M RD
Sbjct: 173 NSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMV-RDEE 231
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVS------------TWSTMVNGYVKINQIE 155
+ N +I KL D EK + S +V+ Y+K N I+
Sbjct: 232 VTP---NSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAID 288
Query: 156 EAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE----PERNVVSWNTIIKA 211
A+RLF E N M Y + G +AL +F M + P+R +++ A
Sbjct: 289 VAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDR-----ISMLSA 343
Query: 212 LVRCGRIEDAQW 223
+ C ++ + W
Sbjct: 344 ISSCSQLRNILW 355
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 11/194 (5%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDH---ARKVFDQMPERDM-RLWDTMINGYIKCGMIKEAR 95
L+ ++ ++R C+ G + A++VF+ +++++I GY G+ EA
Sbjct: 60 LDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAI 119
Query: 96 KLFDQMAERDTRL-WTTMLNGYIEC------GMIKEARKLFDGPDAEKSVSTWSTMVNGY 148
LF +M T G C G + L K + +++V+ Y
Sbjct: 120 LLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFY 179
Query: 149 VKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTI 208
+ +++ A ++F EM ER VSW M+ GY + + A+DLF RM E + T+
Sbjct: 180 AECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTM 239
Query: 209 IKALVRCGRIEDAQ 222
+ + C ++ED +
Sbjct: 240 VCVISACAKLEDLE 253
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 106/213 (49%), Gaps = 14/213 (6%)
Query: 27 YPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYI 86
Y F+R S +N M ++ + K D A+++FD+ ++ L + M + Y+
Sbjct: 259 YAFIRN---SGIEVNDLM--VSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYV 313
Query: 87 KCGMIKEARKLFDQMAERDTRL-WTTMLNGYIECGMIKEA--RKLFDGPDAEKSVSTWST 143
+ G+ +EA +F+ M + R +ML+ C ++ K G +W
Sbjct: 314 RQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDN 373
Query: 144 MVNG----YVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE 199
+ N Y+K ++ + A R+F M + V+WN ++ GY +NG+++ A + F MPE
Sbjct: 374 ICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE-- 431
Query: 200 RNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE 232
+N+VSWNTII LV+ E+A F MQ +E
Sbjct: 432 KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQE 464
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 93/197 (47%), Gaps = 35/197 (17%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
CN+ I K R D A ++FD+M + + W++++ GY++ G + A + F+ M E++
Sbjct: 375 CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI 434
Query: 107 RLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS----TWSTMVNGYVKINQIEEAERLFY 162
W T+++G ++ + +EA ++F +++ V+ T ++ + + ++ A+ ++Y
Sbjct: 435 VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYY 494
Query: 163 EMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQ 222
+ E+ + ++ +G T++ RCG E A
Sbjct: 495 YI-EKNGIQLDVRLG----------------------------TTLVDMFSRCGDPESAM 525
Query: 223 WHFNQMQERERDVSSWT 239
FN + RDVS+WT
Sbjct: 526 SIFNSLT--NRDVSAWT 540
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 85/192 (44%), Gaps = 25/192 (13%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS + + G D ARKVFD+M ER++ W +MI GY + K+A LF +M RD
Sbjct: 173 NSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMV-RDEE 231
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVS------------TWSTMVNGYVKINQIE 155
+ N +I KL D EK + S +V+ Y+K N I+
Sbjct: 232 VTP---NSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAID 288
Query: 156 EAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE----PERNVVSWNTIIKA 211
A+RLF E N M Y + G +AL +F M + P+R +++ A
Sbjct: 289 VAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDR-----ISMLSA 343
Query: 212 LVRCGRIEDAQW 223
+ C ++ + W
Sbjct: 344 ISSCSQLRNILW 355
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 11/194 (5%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDH---ARKVFDQMPERDM-RLWDTMINGYIKCGMIKEAR 95
L+ ++ ++R C+ G + A++VF+ +++++I GY G+ EA
Sbjct: 60 LDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAI 119
Query: 96 KLFDQMAERDTRL-WTTMLNGYIEC------GMIKEARKLFDGPDAEKSVSTWSTMVNGY 148
LF +M T G C G + L K + +++V+ Y
Sbjct: 120 LLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFY 179
Query: 149 VKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTI 208
+ +++ A ++F EM ER VSW M+ GY + + A+DLF RM E + T+
Sbjct: 180 AECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTM 239
Query: 209 IKALVRCGRIEDAQ 222
+ + C ++ED +
Sbjct: 240 VCVISACAKLEDLE 253
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 109/211 (51%), Gaps = 18/211 (8%)
Query: 47 CNSFI-----SRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKL 97
C+SF+ K G+ HA +VF++ P+R + +W+ +INGY + + A L
Sbjct: 159 CDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTL 218
Query: 98 FDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEA 157
F M ER++ W+T++ GY++ G + A++LF+ EK+V +W+T++NG+ + E A
Sbjct: 219 FRSMPERNSGSWSTLIKGYVDSGELNRAKQLFE-LMPEKNVVSWTTLINGFSQTGDYETA 277
Query: 158 ERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKA 211
++EM E+ + + ++ ++G + + + + + + + ++
Sbjct: 278 ISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDM 337
Query: 212 LVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+CG ++ A F+ M +D+ SWT ++
Sbjct: 338 YAKCGELDCAATVFSNMN--HKDILSWTAMI 366
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 114/245 (46%), Gaps = 26/245 (10%)
Query: 12 LMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMP 71
L+HA K +T L H + + R + + ++ C+S + D++ +F
Sbjct: 35 LIHACK-DTASLRHVHAQILRRGVLSSRVAAQLVSCSSLLKS------PDYSLSIFRNSE 87
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQM------AERDTRLWTTMLN---GYIECGMI 122
ER+ + + +I G + + + + F M +R T + N G+ G
Sbjct: 88 ERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRA 147
Query: 123 KEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER----KDVSWNIMMGG 178
A L + D + V ++V+ Y K Q++ A ++F E P+R + WN+++ G
Sbjct: 148 LHAATLKNFVDCDSFVRL--SLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLING 205
Query: 179 YGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSW 238
Y + + A LFR MPE RN SW+T+IK V G + A+ F M E+ +V SW
Sbjct: 206 YCRAKDMHMATTLFRSMPE--RNSGSWSTLIKGYVDSGELNRAKQLFELMPEK--NVVSW 261
Query: 239 TTIVD 243
TT+++
Sbjct: 262 TTLIN 266
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
++ I G + A+++F+ MPE+++ W T+ING+ + G + A + +M E+ +
Sbjct: 231 STLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLK 290
Query: 108 ---------LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAE 158
L +G + G+ L +G ++++ T +V+ Y K +++ A
Sbjct: 291 PNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGT--ALVDMYAKCGELDCAA 348
Query: 159 RLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
+F M + +SW M+ G+ +G+ +A+ FR+M
Sbjct: 349 TVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQM 385
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 113/209 (54%), Gaps = 17/209 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
+S IS LC R A ++ M ER ++ ++ +I+ ++K G + EA KL+D+M +
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK 358
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
R D +++++NG+ + EA+ +F+ D +V T++T++NG+ K +I+E
Sbjct: 359 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDE 418
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIK 210
LF EM +R V++ ++ G+ Q + A +F++M N++++NT++
Sbjct: 419 GVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478
Query: 211 ALVRCGRIEDAQWHFNQMQERERDVSSWT 239
L + G++E A F +Q + + + +T
Sbjct: 479 GLCKNGKLEKAMVVFEYLQRSKMEPTIYT 507
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 112/211 (53%), Gaps = 21/211 (9%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERD----MRLWDTMINGYIKCGMIKEA 94
S++ ++ +S I+ C R D A+ +F+ M +D + ++T+ING+ K I E
Sbjct: 360 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEG 419
Query: 95 RKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLF-----DGPDAEKSVSTWSTMV 145
+LF +M++R +T +TT+++G+ + A+ +F DG ++ T++T++
Sbjct: 420 VELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG--VHPNIMTYNTLL 477
Query: 146 NGYVKINQIEEAERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLF--RRMPEPE 199
+G K ++E+A +F + K ++NIM+ G + G++E DLF + +
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
Query: 200 RNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
+V+ +NT+I R G E+A F +M+E
Sbjct: 538 PDVIIYNTMISGFCRKGLKEEADALFRKMRE 568
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 114/222 (51%), Gaps = 19/222 (8%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEAR 95
+N + N+ I KEG+ A K++D+M +R D+ + ++ING+ + EA+
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 385
Query: 96 KLFDQMAERD----TRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS---TWSTMVNGY 148
+F+ M +D + T++NG+ + I E +LF V T++T+++G+
Sbjct: 386 HMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445
Query: 149 VKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRM--PEPERNV 202
+ + A+ +F +M +++N ++ G +NG++EKA+ +F + + E +
Sbjct: 446 FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 505
Query: 203 VSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIV 242
++N +I+ + + G++ED F + + + DV + T++
Sbjct: 506 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 114/256 (44%), Gaps = 34/256 (13%)
Query: 13 MHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMP- 71
+H+ KL+ + G L S F N +S + K + D + ++M
Sbjct: 61 LHSMKLDDAIGLFGGMVKSRPLPSIFEFN-------KLLSAIAKMKKFDLVISLGEKMQR 113
Query: 72 ---ERDMRLWDTMINGYIKCGMIKEARKLFDQMA----ERDTRLWTTMLNGYIECGMIKE 124
++ ++ +IN + + I A L +M E +++LNGY I +
Sbjct: 114 LGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISD 173
Query: 125 ARKLFDG-------PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER----KDVSWN 173
A L D PD T++T+++G N+ EA L M +R V++
Sbjct: 174 AVALVDQMVEMGYRPDT----ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 174 IMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER 231
+++ G + G I+ A +L +M + E NVV ++T+I +L + +DA F +M+ +
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 232 --ERDVSSWTTIVDCL 245
+V ++++++ CL
Sbjct: 290 GVRPNVITYSSLISCL 305
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N I+ C+ + A + +M E + +++NGY I +A L DQM E
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
DT +TT+++G EA L D + ++ T+ +VNG K I+
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 243
Query: 157 AERLFYEMP----ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIK 210
A L +M E V ++ ++ + + AL+LF M NV++++++I
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 211 ALVRCGRIEDAQWHFNQMQERE--RDVSSWTTIVD 243
L R DA + M ER+ +V ++ ++D
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALID 338
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 108/201 (53%), Gaps = 21/201 (10%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEA----RKLFD 99
N IS CKE R A ++F +MP + D+ ++++I+G + IK A R +
Sbjct: 463 NCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS 522
Query: 100 QMAERDTRLWTTMLNGYIECGMIKEARKL-----FDGPDAEKSVSTWSTMVNGYVKINQI 154
+ +T + T++N ++ G IKEARKL F G ++ T+++++ G + ++
Sbjct: 523 EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEI--TYNSLIKGLCRAGEV 580
Query: 155 EEAERLFYEM----PERKDVSWNIMMGGYGQNGQIEKALDLFRRMP--EPERNVVSWNTI 208
++A LF +M ++S NI++ G ++G +E+A++ + M ++V++N++
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 640
Query: 209 IKALVRCGRIEDAQWHFNQMQ 229
I L R GRIED F ++Q
Sbjct: 641 INGLCRAGRIEDGLTMFRKLQ 661
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 102/189 (53%), Gaps = 14/189 (7%)
Query: 54 LCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER-----DTRL 108
LCK GR D A+ +F ++P+ ++ +++T+I+G++ G + +A+ + M D
Sbjct: 332 LCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 391
Query: 109 WTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMP 165
+ +++ GY + G++ A ++ + +V +++ +V+G+ K+ +I+EA + EM
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
Query: 166 ----ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIE 219
+ V +N ++ + + +I +A+++FR MP + +V ++N++I L I+
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 220 DAQWHFNQM 228
A W M
Sbjct: 512 HALWLLRDM 520
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 99/193 (51%), Gaps = 21/193 (10%)
Query: 48 NSFISRLCKEGRTDHA----RKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
NS IS LC+ HA R + + + ++T+IN +++ G IKEARKL ++M
Sbjct: 498 NSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVF 557
Query: 104 RDTRL----WTTMLNGYIECGMIKEARKLF-----DGPDAEKSVSTWSTMVNGYVKINQI 154
+ + L + +++ G G + +AR LF DG A ++S + ++NG + +
Sbjct: 558 QGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG-HAPSNISC-NILINGLCRSGMV 615
Query: 155 EEAERLFYEMPERKD----VSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTI 208
EEA EM R V++N ++ G + G+IE L +FR++ + V++NT+
Sbjct: 616 EEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTL 675
Query: 209 IKALVRCGRIEDA 221
+ L + G + DA
Sbjct: 676 MSWLCKGGFVYDA 688
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 97/210 (46%), Gaps = 24/210 (11%)
Query: 54 LCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQM----AERD 105
C D A + M + + ++ T+I+ KC + EA +L ++M D
Sbjct: 227 FCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPD 286
Query: 106 TRLWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTMVNGYVKINQIEEAE 158
+ ++ G + I EA K+ + PD T+ ++NG KI +++ A+
Sbjct: 287 AETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDD----ITYGYLMNGLCKIGRVDAAK 342
Query: 159 RLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER---NVVSWNTIIKALVRC 215
LFY +P+ + V +N ++ G+ +G+++ A + M +V ++N++I +
Sbjct: 343 DLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKE 402
Query: 216 GRIEDAQWHFNQMQER--ERDVSSWTTIVD 243
G + A + M+ + + +V S+T +VD
Sbjct: 403 GLVGLALEVLHDMRNKGCKPNVYSYTILVD 432
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 101/209 (48%), Gaps = 42/209 (20%)
Query: 60 TDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIEC 119
+ +AR+VFD++P+ ++ W+ ++ Y K G+I E F+++ +RD W ++ GY
Sbjct: 57 STYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLS 116
Query: 120 GMIKEARKLFDGP----DAEKSVSTWSTMV-----NGYVKINQ----------------- 153
G++ A K ++ A + T TM+ NG+V + +
Sbjct: 117 GLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLV 176
Query: 154 -------------IEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER 200
I +A+++FY + +R V +N +MGG G IE AL LFR M E+
Sbjct: 177 GSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM---EK 233
Query: 201 NVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
+ VSW +IK L + G ++A F +M+
Sbjct: 234 DSVSWAAMIKGLAQNGLAKEAIECFREMK 262
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 11/200 (5%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA----E 103
++ I CK +A+ VFD+M ++++ W M+ GY + G +EA K+F M +
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368
Query: 104 RDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKS----VSTWSTMVNGYVKINQIEEAER 159
D ++ ++E + F G V+ +++V Y K I+++ R
Sbjct: 369 PDHYTLGQAISACANVSSLEEGSQ-FHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTR 427
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGR 217
LF EM R VSW M+ Y Q G+ + + LF +M + + + V+ +I A R G
Sbjct: 428 LFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGL 487
Query: 218 IEDAQWHFNQMQERERDVSS 237
+E Q +F M V S
Sbjct: 488 VEKGQRYFKLMTSEYGIVPS 507
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 97/205 (47%), Gaps = 20/205 (9%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
++L + C + +S L +EG H + + + + + ++++ Y KCG I ++ +L
Sbjct: 372 YTLGQAISACAN-VSSL-EEGSQFHGKAITSGLIHY-VTVSNSLVTLYGKCGDIDDSTRL 428
Query: 98 FDQMAERDTRLWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTMVNGYVK 150
F++M RD WT M++ Y + G E +LFD PD T + +++ +
Sbjct: 429 FNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDG----VTLTGVISACSR 484
Query: 151 INQIEEAERLFYEMPERKDV-----SWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSW 205
+E+ +R F M + ++ M+ + ++G++E+A+ MP P + + W
Sbjct: 485 AGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPP-DAIGW 543
Query: 206 NTIIKALVRCGRIEDAQWHFNQMQE 230
T++ A G +E +W + E
Sbjct: 544 TTLLSACRNKGNLEIGKWAAESLIE 568
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 81/197 (41%), Gaps = 39/197 (19%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
F L + + K G A+KVFD+MPER + MI Y K G ++ AR L
Sbjct: 155 FGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARAL 214
Query: 98 FDQMAERDTRLWTTMLNGYIECGMIKEARKLFD--------GPDAEKSVSTWST------ 143
FD M ERD W M++GY + G +A LF PD V+ S
Sbjct: 215 FDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGA 274
Query: 144 -------------------------MVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGG 178
+++ Y K +EEA +F + P + V+WN M+ G
Sbjct: 275 LETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAG 334
Query: 179 YGQNGQIEKALDLFRRM 195
Y +G + AL LF M
Sbjct: 335 YAMHGYSQDALRLFNEM 351
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 102/239 (42%), Gaps = 26/239 (10%)
Query: 13 MHAHKLNTHPLIHG-YPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMP 71
+HA L + L+H YP L +L ++ G+ H+ +F Q
Sbjct: 48 IHAAILRHNLLLHPRYPVLNLKLHRAYA----------------SHGKIRHSLALFHQTI 91
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR----LWTTMLNG-YIECGMIKEAR 126
+ D+ L+ IN G+ +A L+ Q+ + ++++L + G +
Sbjct: 92 DPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSGKLIHTH 151
Query: 127 KLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIE 186
L G + V+T +V+ Y K + A+++F MPER VS M+ Y + G +E
Sbjct: 152 VLKFGLGIDPYVATG--LVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVE 209
Query: 187 KALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
A LF M E R++VSWN +I + G DA F ++ + T+V L
Sbjct: 210 AARALFDSMCE--RDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAAL 266
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 99/195 (50%), Gaps = 25/195 (12%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
S ++ K+G A+ +FD+MPERD +W+ +I GY + G +A KLF M ++
Sbjct: 89 TSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFS 148
Query: 108 LWTTMLNGYI----ECGMIKEARKLFDGPDAEKSVSTWS----TMVNGYVKINQIEEAER 159
T L + +CG + + R + G A+ + S +++ Y K ++ AE
Sbjct: 149 PSATTLVNLLPFCGQCGFVSQGRSV-HGVAAKSGLELDSQVKNALISFYSKCAELGSAEV 207
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNV-VSWNTIIKAL------ 212
LF EM ++ VSWN M+G Y Q+G E+A+ +F+ M E+NV +S TII L
Sbjct: 208 LFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNM--FEKNVEISPVTIINLLSAHVSH 265
Query: 213 -------VRCGRIED 220
V+CG + D
Sbjct: 266 EPLHCLVVKCGMVND 280
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG 131
+R + + +++N Y+K G + A+ LFD+M ERDT +W ++ GY G +A KLF
Sbjct: 82 DRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIV 141
Query: 132 PDAEKSVSTWSTMVN--------GYVK----INQIEEAERLFYEMPERKDVSWNIMMGGY 179
+ + +T+VN G+V ++ + L E N ++ Y
Sbjct: 142 MLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGL-----ELDSQVKNALISFY 196
Query: 180 GQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWT 239
+ ++ A LFR M + ++ VSWNT+I A + G E+A F M E+ ++S T
Sbjct: 197 SKCAELGSAEVLFREMKD--KSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVT 254
Query: 240 TI 241
I
Sbjct: 255 II 256
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 12/210 (5%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS I K G D A+ +FD+MP+R+ W++MI+G+++ G K+A +F +M E+D +
Sbjct: 196 NSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVK 255
Query: 108 ----LWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIEEAERL 160
++LN G ++ R + + E + + +++ Y K IEE +
Sbjct: 256 PDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNV 315
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRI 218
F P+++ WN M+ G NG E+A+DLF + E + VS+ ++ A G +
Sbjct: 316 FECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEV 375
Query: 219 EDAQWHFNQMQER---ERDVSSWTTIVDCL 245
A F M+E+ E + +T +V+ L
Sbjct: 376 HRADEFFRLMKEKYMIEPSIKHYTLMVNVL 405
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 26/229 (11%)
Query: 8 LSFILMHAHKLNTHPLI-----HGYPFLRTRLASTFSLNT--EMKRCNSFISRLCKEGRT 60
L+F +N L+ H PF+ + FS ++ EM + FI LC
Sbjct: 64 LAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMA-ISIFIDMLCSSPSV 122
Query: 61 DHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL----FDQMAERDTRLWTTMLNGY 116
P+R + ++ Y + G ++ R+L + E D+ + TML+ Y
Sbjct: 123 K---------PQR--LTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMY 171
Query: 117 IECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMM 176
+ CG + EA ++F G V+ W++M+ G+ K I++A+ LF EMP+R VSWN M+
Sbjct: 172 VTCGCLIEAWRIFLGMIGFDVVA-WNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMI 230
Query: 177 GGYGQNGQIEKALDLFRRMPEPERNVVSWN--TIIKALVRCGRIEDAQW 223
G+ +NG+ + ALD+FR M E + + +++ A G E +W
Sbjct: 231 SGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRW 279
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 102/192 (53%), Gaps = 15/192 (7%)
Query: 61 DHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM-----AERDTRL-WTTMLN 114
++A VF ++ ++ +W+T+I G+ + + A +F M + + RL + ++
Sbjct: 75 NYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFK 134
Query: 115 GYIECGMIKEARKLF-----DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKD 169
Y G ++ R+L +G + + + +TM++ YV + EA R+F M
Sbjct: 135 AYGRLGQARDGRQLHGMVIKEGLEDDSFIR--NTMLHMYVTCGCLIEAWRIFLGMIGFDV 192
Query: 170 VSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
V+WN M+ G+ + G I++A +LF MP+ RN VSWN++I VR GR +DA F +MQ
Sbjct: 193 VAWNSMIMGFAKCGLIDQAQNLFDEMPQ--RNGVSWNSMISGFVRNGRFKDALDMFREMQ 250
Query: 230 ERERDVSSWTTI 241
E++ +T +
Sbjct: 251 EKDVKPDGFTMV 262
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 100/234 (42%), Gaps = 23/234 (9%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
IH Y +R R F LN+ + + I CK G + VF+ P++ + W++MI
Sbjct: 280 IHEY-IVRNR----FELNSIV--VTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMIL 332
Query: 84 GYIKCGMIKEARKLFDQMA----ERDTRLWTTMLNGYIECGMIKEARKLF----DGPDAE 135
G G + A LF ++ E D+ + +L G + A + F + E
Sbjct: 333 GLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIE 392
Query: 136 KSVSTWSTMVNGYVKINQIEEAERLFYEMPERKD-VSWNIMMGGYGQNGQIE---KALDL 191
S+ ++ MVN +EEAE L MP +D V W+ ++ + G +E +A
Sbjct: 393 PSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKC 452
Query: 192 FRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVD 243
+++ E + + A G E+A M+ER E++V + VD
Sbjct: 453 LKKLDPDE--TCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVD 504
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 108/214 (50%), Gaps = 19/214 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
NS IS LC GR A ++ M +R D+ ++ +I+ +K G + EA + +++M
Sbjct: 225 NSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIR 284
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
R D ++ ++ G + EA ++F V T+S ++NGY K ++E
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344
Query: 157 AERLFYEMPE----RKDVSWNIMMGGYGQNGQIEKALDLFRRMP--EPERNVVSWNTIIK 210
+LF EM + R V++ I++ GY + G++ A ++FRRM N++++N ++
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLH 404
Query: 211 ALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIV 242
L G+IE A MQ+ + D+ ++ I+
Sbjct: 405 GLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 113/215 (52%), Gaps = 19/215 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
+S IS LC GR A ++ M ER ++ + +I+ ++K G + EA KL+D+M +
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
R D +++++NG+ + EA+ +F+ D +V T+ST++ G+ K ++EE
Sbjct: 357 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEE 416
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWNTIIK 210
LF EM +R V++ ++ G+ Q + A +F++M N++++N ++
Sbjct: 417 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 476
Query: 211 ALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVD 243
L + G++ A F +Q E D+ ++ +++
Sbjct: 477 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 511
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 105/199 (52%), Gaps = 17/199 (8%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEAR 95
+N + ++ I KEG+ A K++D+M +R D+ + ++ING+ + EA+
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 96 KLFDQMAERD----TRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS---TWSTMVNGY 148
+F+ M +D ++T++ G+ + ++E +LF V T++T+++G+
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Query: 149 VKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNV 202
+ + A+ +F +M +++NI++ G +NG++ KA+ +F + E ++
Sbjct: 444 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 503
Query: 203 VSWNTIIKALVRCGRIEDA 221
++N +I+ + + G++ED
Sbjct: 504 YTYNIMIEGMCKAGKVEDG 522
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 108/210 (51%), Gaps = 19/210 (9%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERD----MRLWDTMINGYIKCGMIKEA 94
S++ ++ +S I+ C R D A+ +F+ M +D + + T+I G+ K ++E
Sbjct: 358 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEG 417
Query: 95 RKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNG 147
+LF +M++R +T +TT+++G+ + A+ +F ++ T++ +++G
Sbjct: 418 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 477
Query: 148 YVKINQIEEAERLFYEMPERKDV-----SWNIMMGGYGQNGQIEKALDLF--RRMPEPER 200
K ++ +A +F E +R + ++NIM+ G + G++E +LF +
Sbjct: 478 LCKNGKLAKAMVVF-EYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSP 536
Query: 201 NVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
NV+++NT+I R G E+A +M+E
Sbjct: 537 NVIAYNTMISGFCRKGSKEEADSLLKKMKE 566
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 19/226 (8%)
Query: 37 TFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIK 92
T ++ ++ + FI+ C+ + A V +M E D+ +++NGY I
Sbjct: 111 TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 93 EARKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGP---DAEKSVSTWSTMV 145
+A L DQM E DT +TT+++G EA L D + + T+ T+V
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 146 NGYVKINQIEEAERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPEP--E 199
NG K I+ A L +M + K V +N ++ G + ++ AL+LF M
Sbjct: 231 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 290
Query: 200 RNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE--RDVSSWTTIVD 243
+V +++++I L GR DA + M ER+ +V +++ ++D
Sbjct: 291 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 336
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 40/222 (18%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL 108
+ ++ G D AR+ F +M R++ + M++GY KCG + +A+ +FDQ ++D
Sbjct: 252 ALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVC 311
Query: 109 WTTMLNGYIECGMIKEARKLFD-------GPDA--------------------------- 134
WTTM++ Y+E +EA ++F+ PD
Sbjct: 312 WTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIH 371
Query: 135 ----EKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALD 190
E +S + ++N Y K ++ +F +MP R VSW+ M+ +G+ AL
Sbjct: 372 VNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALS 431
Query: 191 LFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
LF RM + E N V++ ++ G +E+ + F M +
Sbjct: 432 LFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTD 473
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 104/241 (43%), Gaps = 49/241 (20%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
+HG F L F F+ GR ++AR VFD+M RD+ W+TMI
Sbjct: 133 LHGVAFKIATLCDPFVET-------GFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIE 185
Query: 84 GYIKCGMIKEARKLFDQMAER--------------------------------------- 104
Y + G++ EA KLF++M +
Sbjct: 186 RYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRM 245
Query: 105 DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM 164
DT L T ++ Y G + AR+ F +++ + MV+GY K ++++A+ +F +
Sbjct: 246 DTHLLTALVTMYAGAGCMDMAREFFRKMSV-RNLFVSTAMVSGYSKCGRLDDAQVIFDQT 304
Query: 165 PERKDVSWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIKALVRCGRIEDAQ 222
++ V W M+ Y ++ ++AL +F M + +VVS ++I A G ++ A+
Sbjct: 305 EKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAK 364
Query: 223 W 223
W
Sbjct: 365 W 365
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 9/169 (5%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
L +E+ N+ I+ K G D R VF++MP R++ W +MIN G +A LF
Sbjct: 375 LESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFA 434
Query: 100 QMAERDTR----LWTTMLNGYIECGMIKEARKLFDGPDAEKSVST----WSTMVNGYVKI 151
+M + + + +L G G+++E +K+F E +++ + MV+ + +
Sbjct: 435 RMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRA 494
Query: 152 NQIEEAERLFYEMPERKDVS-WNIMMGGYGQNGQIEKALDLFRRMPEPE 199
N + EA + MP +V W +M +G++E +R+ E E
Sbjct: 495 NLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELE 543
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 111/239 (46%), Gaps = 46/239 (19%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM----AE 103
NS ++ K R D ARKVFD+M ERD+ W+++INGY+ G+ ++ +F QM E
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293
Query: 104 RDTRLWTTMLNGYIECGMIKEARKLFD-GPDA--EKSVSTWSTMVNGYVKINQIEEAERL 160
D ++ G + +I R + G A + +T+++ Y K ++ A+ +
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 353
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE----PE----------------- 199
F EM +R VS+ M+ GY + G +A+ LF M E P+
Sbjct: 354 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLL 413
Query: 200 ---RNVVSW-------------NTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+ V W N ++ +CG +++A+ F++M R +D+ SW TI+
Sbjct: 414 DEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEM--RVKDIISWNTII 470
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 7/183 (3%)
Query: 43 EMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA 102
E + CN+ + K G D A+ VF +M +R + + +MI GY + G+ EA KLF++M
Sbjct: 330 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 389
Query: 103 ER----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIE 155
E D T +LN ++ E +++ + D + + +++ Y K ++
Sbjct: 390 EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQ 449
Query: 156 EAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRC 215
EAE +F EM + +SWN ++GGY +N +AL LF + E +R T+ L C
Sbjct: 450 EAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPAC 509
Query: 216 GRI 218
+
Sbjct: 510 ASL 512
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 17/213 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
N+ + K G A VF +M +D+ W+T+I GY K EA LF+ + E
Sbjct: 436 NALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRF 495
Query: 105 --DTRLWTTMLNGYIECGMIKEARKLF-----DGPDAEKSVSTWSTMVNGYVKINQIEEA 157
D R +L + R++ +G +++ V+ +++V+ Y K + A
Sbjct: 496 SPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVA--NSLVDMYAKCGALLLA 553
Query: 158 ERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRC 215
LF ++ + VSW +M+ GYG +G ++A+ LF +M + E + +S+ +++ A
Sbjct: 554 HMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHS 613
Query: 216 GRIEDAQWHFNQMQER---ERDVSSWTTIVDCL 245
G +++ FN M+ E V + IVD L
Sbjct: 614 GLVDEGWRFFNIMRHECKIEPTVEHYACIVDML 646
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 95/230 (41%), Gaps = 48/230 (20%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM----AERDTRLWTTML 113
G A +VFD++ W+ ++N K G + LF +M E D+ ++ +
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS 202
Query: 114 NGYIECGMIKEARKL----FDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKD 169
+ + +L E++ S +++V Y+K +++ A ++F EM ER
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERN-SVGNSLVAFYLKNQRVDSARKVFDEMTERDV 261
Query: 170 VSWNIMMGGYGQNGQIEKALDLF------------------------RRMPEPERNVVS- 204
+SWN ++ GY NG EK L +F R+ R V S
Sbjct: 262 ISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSI 321
Query: 205 ------------WNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
NT++ +CG ++ A+ F +M +R V S+T+++
Sbjct: 322 GVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS--VVSYTSMI 369
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 11/152 (7%)
Query: 85 YIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTW 141
Y CG +KEA ++FD++ W ++N + G + LF E T+
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 142 STMVNGYVKINQIEEAERLF-----YEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP 196
S + + + + E+L ER V N ++ Y +N +++ A +F M
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVG-NSLVAFYLKNQRVDSARKVFDEM- 256
Query: 197 EPERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
ER+V+SWN+II V G E F QM
Sbjct: 257 -TERDVISWNSIINGYVSNGLAEKGLSVFVQM 287
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 109/244 (44%), Gaps = 49/244 (20%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS I+ G A +FD++PE D W+++I GY+K G + A LF +MAE++
Sbjct: 154 NSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAI 213
Query: 108 LWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWS------------------ 142
WTTM++GY++ M KEA +LF PD + S
Sbjct: 214 SWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYL 273
Query: 143 -------------TMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKAL 189
+++ Y K ++EEA +F + ++ +W ++ GY +G +A+
Sbjct: 274 NKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAI 333
Query: 190 DLFRRMPE--PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERD------VSSWTTI 241
F M + + NV+++ ++ A G +E+ + F M ERD + + I
Sbjct: 334 SKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSM---ERDYNLKPTIEHYGCI 390
Query: 242 VDCL 245
VD L
Sbjct: 391 VDLL 394
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 62 HARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM----AERDTRLWTTMLNGYI 117
+A+ VFD D LW+ MI G+ + + L+ +M A + + ++L
Sbjct: 67 YAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACS 126
Query: 118 ECGMIKEARKL---FDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNI 174
+E ++ E V ++++N Y + A LF +PE DVSWN
Sbjct: 127 NLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNS 186
Query: 175 MMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE 232
++ GY + G+++ AL LFR+M E+N +SW T+I V+ ++A F++MQ +
Sbjct: 187 VIKGYVKAGKMDIALTLFRKM--AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSD 242
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 25/207 (12%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
SLNT +C G+ A+ +FD+M ++ LW+ MI+GY K G +EA +
Sbjct: 261 ISLNTMYAKC----------GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDM 310
Query: 98 FDQMAERDTR----LWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVK 150
F +M +D R T+ ++ + G +++AR +++ D V S +++ + K
Sbjct: 311 FHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAK 370
Query: 151 INQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWN--TI 208
+E A +F +R V W+ M+ GYG +G+ +A+ L+R M ER V N T
Sbjct: 371 CGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM---ERGGVHPNDVTF 427
Query: 209 IKALVRC---GRIEDAQWHFNQMQERE 232
+ L+ C G + + W FN+M + +
Sbjct: 428 LGLLMACNHSGMVREGWWFFNRMADHK 454
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMP--ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERD 105
N I+ K R AR VF+ +P ER + W +++ Y + G EA ++F QM + D
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 106 TR----LWTTMLNGYIECGMIKEARKLFDG---------PDAEKSVSTWSTMVNGYVKIN 152
+ ++LN + +K+ R + PD S++T Y K
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM------YAKCG 271
Query: 153 QIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIK 210
Q+ A+ LF +M + WN M+ GY +NG +A+D+F M + + +S + I
Sbjct: 272 QVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAIS 331
Query: 211 ALVRCGRIEDAQ--WHFNQMQERERDVSSWTTIVD 243
A + G +E A+ + + + DV + ++D
Sbjct: 332 ACAQVGSLEQARSMYEYVGRSDYRDDVFISSALID 366
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 13/149 (8%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM----AERDTRLWTTML 113
G AR+VFD +P + W+ +I GY + ++A ++ M D+ + +L
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 114 NG-----YIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLF--YEMPE 166
+++ G A+ G DA+ V + ++ Y K ++ A +F +PE
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDAD--VFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184
Query: 167 RKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
R VSW ++ Y QNG+ +AL++F +M
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSQM 213
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 11/208 (5%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
+ IS K G D AR+VF+QM ++D W MI Y + G EA KLF +M +
Sbjct: 272 SKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVS 331
Query: 105 -DTRLWTTMLNGYIECGMIKEARKLFDGPDA---EKSVSTWSTMVNGYVKINQIEEAERL 160
D +T+L+ G ++ +++ + ++ + +V+ Y K ++EEA R+
Sbjct: 332 PDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRV 391
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIED 220
F MP + + +WN M+ Y G ++AL LF RM P + +++ ++ A V G +
Sbjct: 392 FEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVPPSD-ITFIGVLSACVHAGLVHQ 450
Query: 221 AQWHFNQMQER---ERDVSSWTTIVDCL 245
+F++M + +T I+D L
Sbjct: 451 GCRYFHEMSSMFGLVPKIEHYTNIIDLL 478
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 94/180 (52%), Gaps = 12/180 (6%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
+S I K G+ +ARK+FD++ ERD W++MI+GY + G K+A LF +M E
Sbjct: 171 HSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFE 230
Query: 105 -DTRLWTTMLNGYIECGMIKEARKLFDGPDAEK-SVSTW--STMVNGYVKINQIEEAERL 160
D R +ML G ++ R L + +K +ST+ S +++ Y K ++ A R+
Sbjct: 231 PDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRV 290
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVS--WNTIIKALVRCGRI 218
F +M ++ V+W M+ Y QNG+ +A LF M E+ VS T+ L CG +
Sbjct: 291 FNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEM---EKTGVSPDAGTLSTVLSACGSV 347
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 78/187 (41%), Gaps = 32/187 (17%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF 98
+L+T + C S + + HA ++ Q ++ + +++ Y KCG ++EA ++F
Sbjct: 336 TLSTVLSACGSVGALELGKQIETHASELSLQ---HNIYVATGLVDMYGKCGRVEEALRVF 392
Query: 99 DQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAE 158
+ M ++ W M+ Y G KEA LFD S T+ +++ V + +
Sbjct: 393 EAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVPPSDITFIGVLSACVHAGLVHQGC 452
Query: 159 RLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRI 218
R F+EM +F +P+ E + II L R G +
Sbjct: 453 RYFHEMS------------------------SMFGLVPKIEH----YTNIIDLLSRAGML 484
Query: 219 EDAQWHF 225
++A W F
Sbjct: 485 DEA-WEF 490
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 81/186 (43%), Gaps = 12/186 (6%)
Query: 35 ASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEA 94
AS SL + + K GR + A +VF+ MP ++ W+ MI Y G KEA
Sbjct: 360 ASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEA 419
Query: 95 RKLFDQMAERDTRL-WTTMLNGYIECGMIKEARKLFDGPDA----EKSVSTWSTMVNGYV 149
LFD+M+ + + + +L+ + G++ + + F + + ++ +++
Sbjct: 420 LLLFDRMSVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLS 479
Query: 150 KINQIEEAERLFYEMPERKD-VSWNIMMGGYGQNGQI---EKALDLFRRMPEPERN---V 202
+ ++EA P + D + ++G + + EKA+ + M E + V
Sbjct: 480 RAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYV 539
Query: 203 VSWNTI 208
+S N +
Sbjct: 540 ISSNVL 545
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 109/210 (51%), Gaps = 12/210 (5%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE 93
+ S F L+T ++ + ++ K G + AR+VFD+MPE+ + W+++++G+ + G+ E
Sbjct: 134 VVSGFGLDTYVQA--ALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADE 191
Query: 94 ARKLFDQMAER----DTRLWTTMLNGYIECGMIKEA---RKLFDGPDAEKSVSTWSTMVN 146
A ++F QM E D+ + ++L+ + G + + + +V + ++N
Sbjct: 192 AIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALIN 251
Query: 147 GYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE---PERNVV 203
Y + + +A +F +M E +W M+ YG +G ++A++LF +M + P N V
Sbjct: 252 LYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNV 311
Query: 204 SWNTIIKALVRCGRIEDAQWHFNQMQERER 233
++ ++ A G +E+ + + +M + R
Sbjct: 312 TFVAVLSACAHAGLVEEGRSVYKRMTKSYR 341
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 118/255 (46%), Gaps = 50/255 (19%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE 93
L+ F+LNT + R S I+ + D A ++FD+ P+RD+ ++ +I+G +K I
Sbjct: 149 LSDLFTLNT-LIRVYSLIAPI------DSALQLFDENPQRDVVTYNVLIDGLVKAREIVR 201
Query: 94 ARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWST--- 143
AR+LFD M RD W ++++GY + +EA KLFD PD VST S
Sbjct: 202 ARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQ 261
Query: 144 ----------------------------MVNGYVKINQIEEAERLFYEMPERKDVSWNIM 175
+V+ Y K I+ A +F ++ +WN M
Sbjct: 262 SGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAM 321
Query: 176 MGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ---E 230
+ G +G E +D FR+M + + V++ +++ G +++A+ F+QM+ +
Sbjct: 322 ITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYD 381
Query: 231 RERDVSSWTTIVDCL 245
R++ + + D L
Sbjct: 382 VNREMKHYGCMADLL 396
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 27/183 (14%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCG----MIKEARKLFDQMAERDTRLWTT 111
K G D A ++F+ ++ + W+ MI G G + RK+ + D + +
Sbjct: 296 KCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFIS 355
Query: 112 MLNGYIECGMIKEARKLFDG----PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPE- 166
+L G G++ EAR LFD D + + + M + + IEEA + +MP+
Sbjct: 356 VLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKD 415
Query: 167 ----RKDVSWNIMMGGYGQNGQIE---------KALD-----LFRRMPEPERNVVSWNTI 208
K ++W+ ++GG +G IE KAL +++ M E N W +
Sbjct: 416 GGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEV 475
Query: 209 IKA 211
+K
Sbjct: 476 VKV 478
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 103/226 (45%), Gaps = 40/226 (17%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ ++ G D A ++F M RD+ W +++ GY++ G +K AR FDQM RD
Sbjct: 275 NALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRI 334
Query: 108 LWTTMLNGYIECGMIKEARKLF-------------------------------------- 129
WT M++GY+ G E+ ++F
Sbjct: 335 SWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYI 394
Query: 130 DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKAL 189
D + V + +++ Y K E+A+++F++M +R +W M+ G NGQ ++A+
Sbjct: 395 DKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAI 454
Query: 190 DLFRRMPE--PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERER 233
+F +M + + + +++ ++ A G ++ A+ F +M+ R
Sbjct: 455 KVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHR 500
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 118/313 (37%), Gaps = 95/313 (30%)
Query: 22 PLIHGYPFLRTRL----------------ASTFSLNTEMKRCNSFISRLCKEGRTDHARK 65
P H +PFL L F L + + N+ + G D AR
Sbjct: 132 PDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARG 191
Query: 66 VFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM------------------------ 101
VFD+ + D+ W+ MI+GY + +E+ +L +M
Sbjct: 192 VFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKD 251
Query: 102 ---------------AERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVN 146
E RL ++N Y CG + A ++F A + V +W+++V
Sbjct: 252 KDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKA-RDVISWTSIVK 310
Query: 147 GYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP-------- 198
GYV+ ++ A F +MP R +SW IM+ GY + G ++L++FR M
Sbjct: 311 GYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFT 370
Query: 199 -----------------------------ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
+ +VV N +I +CG E AQ F+ M
Sbjct: 371 MVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMD 430
Query: 230 ERERDVSSWTTIV 242
+R++ +WT +V
Sbjct: 431 QRDK--FTWTAMV 441
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 111/266 (41%), Gaps = 86/266 (32%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTML 113
G +A K+F ++PE D+ +W+ MI G+ K E +L+ M + D+ + +L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 114 NG------------------------------------YIECGMIKEARKLFDGPDAEKS 137
NG Y CG++ AR +FD ++
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFD-RRCKED 200
Query: 138 VSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS-------------------------- 171
V +W+ M++GY ++ + EE+ L EM ER VS
Sbjct: 201 VFSWNLMISGYNRMKEYEESIELLVEM-ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVH 259
Query: 172 --------------WNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGR 217
N ++ Y G+++ A+ +FR M R+V+SW +I+K V G
Sbjct: 260 EYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSM--KARDVISWTSIVKGYVERGN 317
Query: 218 IEDAQWHFNQMQERERDVSSWTTIVD 243
++ A+ +F+QM R+R SWT ++D
Sbjct: 318 LKLARTYFDQMPVRDR--ISWTIMID 341
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 9/140 (6%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
N+ I K G ++ A+KVF M +RD W M+ G G +EA K+F QM +
Sbjct: 407 NALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQ 466
Query: 105 -DTRLWTTMLNGYIECGMIKEARKLF----DGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
D + +L+ GM+ +ARK F E S+ + MV+ + ++EA
Sbjct: 467 PDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYE 526
Query: 160 LFYEMPERKD-VSWNIMMGG 178
+ +MP + + W ++G
Sbjct: 527 ILRKMPMNPNSIVWGALLGA 546
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 8/203 (3%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE 93
+A S+ + S K R + AR+VFDQ +D++ W + ++GY G+ +E
Sbjct: 288 IAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTRE 347
Query: 94 ARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF-----DGPDAEKSVSTWSTMV-NG 147
AR+LFD M ER+ W ML GY+ EA + + + W V +G
Sbjct: 348 ARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSG 407
Query: 148 YVKINQIEEAERLFYEMPERKDV-SWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWN 206
+ ++A Y +V N ++ YG+ G ++ A FR+M E R+ VSWN
Sbjct: 408 ISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSEL-RDEVSWN 466
Query: 207 TIIKALVRCGRIEDAQWHFNQMQ 229
++ + R GR E A F MQ
Sbjct: 467 ALLTGVARVGRSEQALSFFEGMQ 489
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 106/240 (44%), Gaps = 47/240 (19%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR-LWDTMINGYIKCG--MIKEARKLFDQMAER 104
N + R + G D A +F +M E ++R L T+ + + C + E K+ +A +
Sbjct: 232 NVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVK 291
Query: 105 -----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
DT + T++ + Y++C ++ AR++FD + K + +W++ ++GY EA
Sbjct: 292 LSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRS-KDLKSWTSAMSGYAMSGLTREARE 350
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--------------------- 198
LF MPER VSWN M+GGY + ++ALD M +
Sbjct: 351 LFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISD 410
Query: 199 ----------------ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+ NV+ N ++ +CG ++ A F QM E RD SW ++
Sbjct: 411 VQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSEL-RDEVSWNALL 469
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 109/248 (43%), Gaps = 46/248 (18%)
Query: 37 TFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARK 96
TFS + N I K G D AR++F++MPERD W+ +I + G+ E +
Sbjct: 89 TFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFR 148
Query: 97 LFDQMAERDTRLWTTMLNGYIE-CGMIKEARKLFDGPDA------EKSVSTWSTMVNGYV 149
+F +M R T G ++ CG+I + R L A +V +++V+ Y
Sbjct: 149 MFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYG 208
Query: 150 KINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE----PERNVVS- 204
K + +A R+F E+ DVSWN+++ Y + G ++A+ +F +M E P + VS
Sbjct: 209 KCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSS 268
Query: 205 --------------------------------WNTIIKALVRCGRIEDAQWHFNQMQERE 232
++ V+C R+E A+ F+ Q R
Sbjct: 269 VMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFD--QTRS 326
Query: 233 RDVSSWTT 240
+D+ SWT+
Sbjct: 327 KDLKSWTS 334
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 85/209 (40%), Gaps = 45/209 (21%)
Query: 79 DTMINGYIKCGMIKEARKLFDQMAE-RDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKS 137
+ +++ Y KCG ++ A F QM+E RD W +L G G ++A F+G E
Sbjct: 434 NALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAK 493
Query: 138 VSTWS-------------------------------------TMVNGYVKINQIEEAERL 160
S ++ MV+ Y K + A +
Sbjct: 494 PSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEV 553
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP----EPERNVVSWNTIIKALVRCG 216
F E R + WN ++ G +NG+ ++ +LF + +P+ V++ I++A +R G
Sbjct: 554 FKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDH--VTFLGILQACIREG 611
Query: 217 RIEDAQWHFNQMQERERDVSSWTTIVDCL 245
+E +F+ M + +S DC+
Sbjct: 612 HVELGFQYFSSMSTKYH-ISPQVEHYDCM 639
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 40/220 (18%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
CNS ++ K A VF + D ++ M++GY++ + +A KLFD M ER
Sbjct: 79 CNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSC 138
Query: 107 RLWTTMLNGYIECGMIKEARKLFD------------------------------------ 130
+TT++ GY + EA +LF
Sbjct: 139 VSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSL 198
Query: 131 --GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKA 188
E V + +++ Y +++A +LF EMPER V+WN+M+ GY + G IE+A
Sbjct: 199 AIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQA 258
Query: 189 LDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
+LF ++ E+++VSW T+I +R ++++A ++ +M
Sbjct: 259 EELFDQI--TEKDIVSWGTMIDGCLRKNQLDEALVYYTEM 296
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 112/247 (45%), Gaps = 48/247 (19%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF 98
+L + + C S C GR H R V + + + ++++N Y KC ++ +A +F
Sbjct: 43 ALVSALGSCASSNDVTC--GRQIHCR-VLKSGLDSNGYICNSVLNMYAKCRLLADAESVF 99
Query: 99 DQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAE 158
A+ D+ + M++GY+ + +A KLFD E+S +++T++ GY + NQ EA
Sbjct: 100 RDHAKLDSASFNIMVDGYVRSRRLWDALKLFD-VMPERSCVSYTTLIKGYAQNNQWSEAM 158
Query: 159 RLFYEMPE----RKDVSWNIMMGGYGQNGQI----------------------------- 185
LF EM +V+ ++ G I
Sbjct: 159 ELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMY 218
Query: 186 ------EKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWT 239
+ A LF M PERN+V+WN ++ + G IE A+ F+Q+ E+D+ SW
Sbjct: 219 CLCLCLKDARKLFDEM--PERNLVTWNVMLNGYSKAGLIEQAEELFDQIT--EKDIVSWG 274
Query: 240 TIVD-CL 245
T++D CL
Sbjct: 275 TMIDGCL 281
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 114/253 (45%), Gaps = 37/253 (14%)
Query: 27 YPFLRTRLASTFSLNTEMKRC---------------NSFISRLCKEGRTDHARKVFDQMP 71
Y FL+ + ++++ ++K N+ I+ K G + AR+VFDQ
Sbjct: 339 YDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTH 398
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAER-----DTRLWTTMLNGYIECGMIKEAR 126
++D+ W+ MI+GY + + A LF +M D ++ + G ++E +
Sbjct: 399 DKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGK 458
Query: 127 KLFDGPDAEK---SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS------WNIMMG 177
+ D + + + + +++ Y K IE A +F+ + K++S WN ++
Sbjct: 459 RAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFH---QTKNISSSTISPWNAIIC 515
Query: 178 GYGQNGQIEKALDLFRRMPE-PER-NVVSWNTIIKALVRCGRIEDAQWHFNQMQER---E 232
G +G + ALDL+ + P + N +++ ++ A G +E + +F M+ E
Sbjct: 516 GSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIE 575
Query: 233 RDVSSWTTIVDCL 245
D+ + +VD L
Sbjct: 576 PDIKHYGCMVDLL 588
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 121/252 (48%), Gaps = 28/252 (11%)
Query: 22 PLIHGYPFL--------RTRLASTF-------SLNTEMKRCNSFISRLCKEGRTDHARKV 66
P H YPFL RL T + + NS + G A KV
Sbjct: 119 PDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKV 178
Query: 67 FDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIECGMI 122
FD+MPE+D+ W+++ING+ + G +EA L+ +M + D ++L+ + G +
Sbjct: 179 FDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGAL 238
Query: 123 KEARKL---FDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGY 179
+++ +++ + + +++ Y + ++EEA+ LF EM ++ VSW ++ G
Sbjct: 239 TLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGL 298
Query: 180 GQNGQIEKALDLFRRMPEPERNV---VSWNTIIKALVRCGRIEDAQWHFNQMQER---ER 233
NG ++A++LF+ M E + +++ I+ A CG +++ +F +M+E E
Sbjct: 299 AVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEP 358
Query: 234 DVSSWTTIVDCL 245
+ + +VD L
Sbjct: 359 RIEHFGCMVDLL 370
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 61 DHARKVFDQMPER-DMRLWDTMINGYIKCGMIKEARKLFDQM-----AERDTRLWTTMLN 114
+A KVF ++ + ++ +W+T+I GY + G A L+ +M E DT + ++
Sbjct: 70 SYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIK 129
Query: 115 GYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS 171
++ + + +++++ Y + A ++F +MPE+ V+
Sbjct: 130 AVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVA 189
Query: 172 WNIMMGGYGQNGQIEKALDLFRRMP----EPE---------------------------- 199
WN ++ G+ +NG+ E+AL L+ M +P+
Sbjct: 190 WNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI 249
Query: 200 -----RNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
RN+ S N ++ RCGR+E+A+ F++M +++ SWT+++
Sbjct: 250 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMV--DKNSVSWTSLI 295
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 97/201 (48%), Gaps = 14/201 (6%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPE----RDMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
S +S K G ++V M + R++ + +++ Y +CG ++EA+ LFD+M ++
Sbjct: 227 SLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK 286
Query: 105 DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSV----STWSTMVNGYVKINQIEEAERL 160
++ WT+++ G G KEA +LF ++ + + T+ ++ ++E
Sbjct: 287 NSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEY 346
Query: 161 FYEMPERKDVS-----WNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRC 215
F M E + + M+ + GQ++KA + + MP + NVV W T++ A
Sbjct: 347 FRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPM-QPNVVIWRTLLGACTVH 405
Query: 216 GRIEDAQWHFNQMQERERDVS 236
G + A++ Q+ + E + S
Sbjct: 406 GDSDLAEFARIQILQLEPNHS 426
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 71/159 (44%), Gaps = 10/159 (6%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
L + N + + GR + A+ +FD+M +++ W ++I G G KEA +LF
Sbjct: 253 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK 312
Query: 100 QMAERDTRL-----WTTMLNGYIECGMIKEA----RKLFDGPDAEKSVSTWSTMVNGYVK 150
M + L + +L CGM+KE R++ + E + + MV+ +
Sbjct: 313 YMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLAR 372
Query: 151 INQIEEAERLFYEMPERKDVS-WNIMMGGYGQNGQIEKA 188
Q+++A MP + +V W ++G +G + A
Sbjct: 373 AGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 108/203 (53%), Gaps = 17/203 (8%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
S ++ LC GR A + M +R D+ ++ +I+ ++K G +A +L+++M
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276
Query: 105 ----DTRLWTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKINQIEEA 157
+ +T+++NG+ G + EAR++F + V +++++NG+ K ++++A
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDA 336
Query: 158 ERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWNTIIKA 211
++FYEM ++ +++ ++ G+GQ G+ A ++F M N+ ++N ++
Sbjct: 337 MKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHC 396
Query: 212 LVRCGRIEDAQWHFNQMQERERD 234
L G+++ A F MQ+RE D
Sbjct: 397 LCYNGKVKKALMIFEDMQKREMD 419
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 123/219 (56%), Gaps = 22/219 (10%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
S I+ C EG D AR++F M + D+ + ++ING+ KC + +A K+F +M+++
Sbjct: 287 SLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK 346
Query: 105 ----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEA 157
+T +TT++ G+ + G A+++F ++ T++ +++ ++++A
Sbjct: 347 GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKA 406
Query: 158 ERLFYEMPERK------DV-SWNIMMGGYGQNGQIEKALDLFRRMPEPERN--VVSWNTI 208
+F +M +R+ ++ ++N+++ G NG++EKAL +F M + E + ++++ I
Sbjct: 407 LMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTII 466
Query: 209 IKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
I+ + + G++++A F + + + +V ++TT++ L
Sbjct: 467 IQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGL 505
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 105/220 (47%), Gaps = 19/220 (8%)
Query: 43 EMKRCNSFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLF 98
++ CN ++ C+ + A +M E D+ + ++ING+ ++EA +
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 99 DQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPD---AEKSVSTWSTMVNGYVKI 151
+QM E D ++TT+++ + G + A LFD + V ++++VNG
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 152 NQIEEAERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMP--EPERNVVSW 205
+ +A+ L M +RK +++N ++ + + G+ A +L+ M N+ ++
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 206 NTIIKALVRCGRIEDAQWHFNQMQERE--RDVSSWTTIVD 243
++I G +++A+ F M+ + DV ++T++++
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLIN 325
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 122/280 (43%), Gaps = 73/280 (26%)
Query: 27 YPFLRTRLASTFSLN---------------TEMKRCNSFISRLCKEGRTDHARKVFDQMP 71
YPF+ +A SL +++ CNS IS K G A KVF++MP
Sbjct: 133 YPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP 192
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERD---------------TRLWTTMLNGY 116
ERD+ W++MI+GY+ G + LF +M + + +++ +
Sbjct: 193 ERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKE 252
Query: 117 IECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMM 176
I C ++ + D V +++++ Y K ++ AER+F M +R V+WN+M+
Sbjct: 253 IHCHAVRSRIETGD-------VMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMI 305
Query: 177 GGYGQNGQIEKALDLFRRMPE---------------PERNVVSWNTIIKALVR------- 214
G Y +NG++ A F++M E P ++ TI +R
Sbjct: 306 GCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHM 365
Query: 215 ------------CGRIEDAQWHFNQMQERERDVSSWTTIV 242
CG+++ A+ F++M E++V SW +I+
Sbjct: 366 VLETALIDMYGECGQLKSAEVIFDRMA--EKNVISWNSII 403
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 22/200 (11%)
Query: 61 DHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM----AERDTRLWTTMLNGY 116
+ A ++FD+M + D LW+ MI G+ CG+ EA + + +M + DT + ++
Sbjct: 81 EDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSV 140
Query: 117 IECGMIKEARKLFDGPDAEKSVS---TWSTMVNGYVKINQIEEAERLFYEMPERKDVSWN 173
++E +K+ VS +++++ Y+K+ +AE++F EMPER VSWN
Sbjct: 141 AGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWN 200
Query: 174 IMMGGYGQNGQIEKALDLFRRMP----EPERNVVSWNTIIKALVRCGRI------EDAQW 223
M+ GY G +L LF+ M +P+R + + AL C + ++
Sbjct: 201 SMISGYLALGDGFSSLMLFKEMLKCGFKPDR-----FSTMSALGACSHVYSPKMGKEIHC 255
Query: 224 HFNQMQERERDVSSWTTIVD 243
H + + DV T+I+D
Sbjct: 256 HAVRSRIETGDVMVMTSILD 275
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 24/186 (12%)
Query: 57 EGRTDHA---RKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTML 113
EGRT H R+ F +P M L +I+ Y +CG +K A +FD+MAE++ W +++
Sbjct: 348 EGRTIHGYAMRRGF--LPH--MVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSII 403
Query: 114 NGYIECGMIKEARKLFDG-------PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPE 166
Y++ G A +LF PD+ +T ++++ Y + + E + + +
Sbjct: 404 AAYVQNGKNYSALELFQELWDSSLVPDS----TTIASILPAYAESLSLSEGREIHAYIVK 459
Query: 167 RKDVSWNIMMGG----YGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQ 222
+ S I++ Y G +E A F + ++VVSWN+II A G +
Sbjct: 460 SRYWSNTIILNSLVHMYAMCGDLEDARKCFNHI--LLKDVVSWNSIIMAYAVHGFGRISV 517
Query: 223 WHFNQM 228
W F++M
Sbjct: 518 WLFSEM 523
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 116/230 (50%), Gaps = 33/230 (14%)
Query: 21 HPLIHGYPFLR--------TRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPE 72
+ LI+GY + RL S ++ + S I CK+G + A VF+ + E
Sbjct: 265 NSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKE 324
Query: 73 R----DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTT----MLNGYIECGMIKE 124
+ D ++ +++GY + G I++A ++ D M E R TT ++NGY + G + E
Sbjct: 325 KKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVE 384
Query: 125 ARKLFD-------GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV----SWN 173
A ++F PD T++T+V+GY + ++EA +L +M +++ V ++N
Sbjct: 385 AEQIFSRMNDWSLKPDHH----TYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYN 440
Query: 174 IMMGGYGQNGQIEKALDLFRRMPEPERNV--VSWNTIIKALVRCGRIEDA 221
I++ GY + G L L++ M + N +S +T+++AL + G +A
Sbjct: 441 ILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEA 490
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 116/217 (53%), Gaps = 24/217 (11%)
Query: 37 TFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRL------WDTMINGYIKCGM 90
+F ++ ++ C+ ++ C+ G D A VF + E + L ++++INGY G
Sbjct: 218 SFEVSPDVFTCSIVVNAYCRSGNVDKAM-VFAKETESSLGLELNVVTYNSLINGYAMIGD 276
Query: 91 IKEARKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS---TWST 143
++ ++ M+ER + +T+++ GY + G+++EA +F+ +K V+ +
Sbjct: 277 VEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGV 336
Query: 144 MVNGYVKINQIEEAERLFYEMPE---RKDVS-WNIMMGGYGQNGQIEKALDLFRRMPE-- 197
+++GY + QI +A R+ M E R + + N ++ GY ++GQ+ +A +F RM +
Sbjct: 337 LMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWS 396
Query: 198 --PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE 232
P+ + ++NT++ R G +++A +QM ++E
Sbjct: 397 LKPDHH--TYNTLVDGYCRAGYVDEALKLCDQMCQKE 431
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 56 KEGRTDHARKVFDQMPE----RDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL--- 108
++G A V+DQM D+ ++N Y + G + +A +F + E L
Sbjct: 202 RKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAM-VFAKETESSLGLELN 260
Query: 109 ---WTTMLNGYIECGMIK---EARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFY 162
+ +++NGY G ++ +L ++V T+++++ GY K +EEAE +F
Sbjct: 261 VVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFE 320
Query: 163 EMPERKDVS----WNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWNTIIKALVRCG 216
+ E+K V+ + ++M GY + GQI A+ + M E N N++I + G
Sbjct: 321 LLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSG 380
Query: 217 RIEDAQWHFNQMQE--RERDVSSWTTIVD 243
++ +A+ F++M + + D ++ T+VD
Sbjct: 381 QLVEAEQIFSRMNDWSLKPDHHTYNTLVD 409
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 96/207 (46%), Gaps = 29/207 (14%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPE----RDMRLWDTMINGYIKCGMIKE 93
+ T CNS I+ CK G+ A ++F +M + D ++T+++GY + G + E
Sbjct: 360 IGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDE 419
Query: 94 ARKLFDQMAERD----TRLWTTMLNGYIECGMIKEARKLFD-----GPDAEKSVSTWSTM 144
A KL DQM +++ + +L GY G + L+ G +A++ + ST+
Sbjct: 420 ALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADE--ISCSTL 477
Query: 145 VNGYVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKA------LDLFRR 194
+ K+ EA +L+ + R ++ N+M+ G + ++ +A +++FR
Sbjct: 478 LEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRC 537
Query: 195 MPEPERNVVSWNTIIKALVRCGRIEDA 221
P V ++ + + G +++A
Sbjct: 538 KPA----VQTYQALSHGYYKVGNLKEA 560
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 71/133 (53%), Gaps = 12/133 (9%)
Query: 77 LWDTMINGYIKCGMIKEARKLFDQMAERDTRL-----WTTMLNGYIECGMIKEARKLFDG 131
+++ I G K G +++ARKLF + D + +T +++G G I +A L D
Sbjct: 721 VYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDE 780
Query: 132 PDAEK---SVSTWSTMVNGYVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQ 184
+ ++ T++ ++ G K+ ++ A+RL +++P++ +++N ++ G ++G
Sbjct: 781 MALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGN 840
Query: 185 IEKALDLFRRMPE 197
+ +A+ L +M E
Sbjct: 841 VAEAMRLKEKMIE 853
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 82/171 (47%), Gaps = 16/171 (9%)
Query: 77 LWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKE-----ARKLFD- 130
++D ++ Y + G++K A +FD M R+ + + + ++++ A ++D
Sbjct: 157 VFDMILKVYAEKGLVKNALHVFDNMGNYG-RIPSLLSCNSLLSNLVRKGENFVALHVYDQ 215
Query: 131 --GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMP-----ERKDVSWNIMMGGYGQNG 183
+ V T S +VN Y + +++A E E V++N ++ GY G
Sbjct: 216 MISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIG 275
Query: 184 QIEKALDLFRRMPE--PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE 232
+E + R M E RNVV++ ++IK + G +E+A+ F ++E++
Sbjct: 276 DVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKK 326
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 117/245 (47%), Gaps = 45/245 (18%)
Query: 41 NTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQ 100
NT +K+C F +L +GR HA + + D+ + +T++N Y KCG ++EARK+F++
Sbjct: 64 NTLLKKCTVF--KLLIQGRIVHAH-ILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEK 120
Query: 101 MAERDTRLWTTMLNGYIECGMIKEARKLFD-------------------GPDAEK----- 136
M +RD WTT+++GY + +A F+ AE+
Sbjct: 121 MPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCG 180
Query: 137 --------------SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQN 182
+V S +++ Y + +++A+ +F + R DVSWN ++ G+ +
Sbjct: 181 HQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARR 240
Query: 183 GQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQW-HFNQMQERERDVS-SW 238
EKAL+LF+ M + S+ ++ A G +E +W H ++ E+ V+ +
Sbjct: 241 SGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG 300
Query: 239 TTIVD 243
T++D
Sbjct: 301 NTLLD 305
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 116/278 (41%), Gaps = 84/278 (30%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM------ 101
N+ ++ K G + ARKVF++MP+RD W T+I+GY + +A F+QM
Sbjct: 99 NTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYS 158
Query: 102 --------------AER-------------------DTRLWTTMLNGYIECGMIKEARKL 128
AER + + + +L+ Y G++ +A+ +
Sbjct: 159 PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLV 218
Query: 129 FDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM------------------------ 164
FD ++ VS W+ ++ G+ + + E+A LF M
Sbjct: 219 FDALESRNDVS-WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGF 277
Query: 165 -------------PERKDVSW--NIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTII 209
K V++ N ++ Y ++G I A +F R+ + R+VVSWN+++
Sbjct: 278 LEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAK--RDVVSWNSLL 335
Query: 210 KALVRCGRIEDAQWHFNQMQE---RERDVSSWTTIVDC 244
A + G ++A W F +M+ R ++S + + C
Sbjct: 336 TAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTAC 373
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 74 DMRLWDTMINGYIKCGMIKEAR----KLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF 129
D R ++T++ ++ + R + + D + T+LN Y +CG ++EARK+F
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 130 DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM------PERKDVSWNIMMGGYGQNG 183
+ ++ TW+T+++GY + ++ +A F +M P +S I + G
Sbjct: 119 EKM-PQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRG 177
Query: 184 QIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
L F + NV + ++ R G ++DAQ F+ ++ R DV SW ++
Sbjct: 178 CCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRN-DV-SWNALI 234
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 73/146 (50%), Gaps = 20/146 (13%)
Query: 79 DTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEA-------RKLFDG 131
+T+++ Y K G I +ARK+FD++A+RD W ++L Y + G KEA R++
Sbjct: 301 NTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIR 360
Query: 132 PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV---SWN--IMMGGYGQNGQIE 186
P+ +S + + + ++E +YE+ ++ + +W+ ++ G+ G +
Sbjct: 361 PNEISFLSVLTACSHSGL----LDEGWH-YYELMKKDGIVPEAWHYVTVVDLLGRAGDLN 415
Query: 187 KALDLFRRMP-EPERNVVSWNTIIKA 211
+AL MP EP + W ++ A
Sbjct: 416 RALRFIEEMPIEPTAAI--WKALLNA 439
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 100/202 (49%), Gaps = 11/202 (5%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ ++ K G HARK+FD+MP R W+T+++ Y K G + + FDQ+ +RD+
Sbjct: 53 NNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSV 112
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQI------EEAERLF 161
WTTM+ GY G +A ++ E T T+ N + ++
Sbjct: 113 SWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFI 172
Query: 162 YEMPERKDVSW-NIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIED 220
++ R +VS N ++ Y + G A +F RM R++ SWN +I ++ G+++
Sbjct: 173 VKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRM--VVRDISSWNAMIALHMQVGQMDL 230
Query: 221 AQWHFNQMQERERDVSSWTTIV 242
A F QM ERD+ +W +++
Sbjct: 231 AMAQFEQMA--ERDIVTWNSMI 250
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 107/244 (43%), Gaps = 50/244 (20%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRL--WDTMINGYIKCGMIKEARKLFDQMAERD 105
N+ IS + G + AR++ +Q +D+++ + +++GYIK G + +A+ +F + +RD
Sbjct: 318 NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRD 377
Query: 106 TRLWTTMLNGYIECGMIKEARKLFDG-------PDAEK---------------------- 136
WT M+ GY + G EA LF P++
Sbjct: 378 VVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHG 437
Query: 137 ---------SVSTWSTMVNGYVKINQIEEAERLFYEM-PERKDVSWNIMMGGYGQNGQIE 186
SVS + ++ Y K I A R F + ER VSW M+ Q+G E
Sbjct: 438 SAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497
Query: 187 KALDLFRRM----PEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDV---SSWT 239
+AL+LF M P+ +++ + A G + + +F+ M++ ++ + S +
Sbjct: 498 EALELFETMLMEGLRPDH--ITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYA 555
Query: 240 TIVD 243
+VD
Sbjct: 556 CMVD 559
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 100/213 (46%), Gaps = 10/213 (4%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
L + NS ++ K G A+ VFD+M RD+ W+ MI +++ G + A
Sbjct: 175 LGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQ 234
Query: 98 FDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS----TWSTMVNGYVKINQ 153
F+QMAERD W +M++G+ + G A +F + +S T +++++ + +
Sbjct: 235 FEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEK 294
Query: 154 IEEAERLFYEMP----ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTII 209
+ +++ + + + N ++ Y + G +E A L + + + + ++
Sbjct: 295 LCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALL 354
Query: 210 KALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
++ G + A+ F + ++RDV +WT ++
Sbjct: 355 DGYIKLGDMNQAKNIFVSL--KDRDVVAWTAMI 385
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 40/172 (23%)
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
L ++N Y + G ARKLFD + S W+T+++ Y K ++ F ++P+R
Sbjct: 51 LMNNLMNVYSKTGYALHARKLFDEMPLRTAFS-WNTVLSAYSKRGDMDSTCEFFDQLPQR 109
Query: 168 KDVSWNIMMGGYGQNGQIEKAL----DLFRRMPEPER----------------------- 200
VSW M+ GY GQ KA+ D+ + EP +
Sbjct: 110 DSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVH 169
Query: 201 ----------NVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
NV N+++ +CG A++ F++M RD+SSW ++
Sbjct: 170 SFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMV--VRDISSWNAMI 219
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 89/190 (46%), Gaps = 21/190 (11%)
Query: 48 NSFISRLCKEGRTDHARKVFDQM-PERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
N+ I+ K G A + FD + ERD W +MI + G +EA +LF+ M
Sbjct: 452 NALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGL 511
Query: 107 R----LWTTMLNGYIECGMIKEARKLFDG-PDAEK---SVSTWSTMVNGYVKINQIEEAE 158
R + + + G++ + R+ FD D +K ++S ++ MV+ + + ++EA+
Sbjct: 512 RPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQ 571
Query: 159 RLFYEMPERKD-VSWNIMMGGYGQNGQIEKALDLFR------RMPEPERNVVSWNTIIKA 211
+MP D V+W ++ ++ K +DL + + EPE N +++ +
Sbjct: 572 EFIEKMPIEPDVVTWGSLLSAC----RVHKNIDLGKVAAERLLLLEPE-NSGAYSALANL 626
Query: 212 LVRCGRIEDA 221
CG+ E+A
Sbjct: 627 YSACGKWEEA 636
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 137 SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP 196
SV + ++N Y K A +LF EMP R SWN ++ Y + G ++ + F ++
Sbjct: 48 SVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQL- 106
Query: 197 EPERNVVSWNTIIKALVRCGRIEDA 221
P+R+ VSW T+I G+ A
Sbjct: 107 -PQRDSVSWTTMIVGYKNIGQYHKA 130
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 116/267 (43%), Gaps = 57/267 (21%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
IHG+ L F + E+ NS + K GR + A KVF ++ +R + W+ MI
Sbjct: 129 IHGFC-----LKIGFEMMVEVG--NSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIA 181
Query: 84 GYIKCGMIKEARKLFDQMAERDTR------LWTTMLNGYIECGMIKEARKLF-----DGP 132
G++ G +A F M E + + T++L GMI +++ G
Sbjct: 182 GFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGF 241
Query: 133 DAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLF 192
S + ++V+ YVK + A + F ++ E+ +SW+ ++ GY Q G+ +A+ LF
Sbjct: 242 HCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLF 301
Query: 193 RRMPEPERNVVSW-------------------------------------NTIIKALVRC 215
+R+ E + S+ N+++ ++C
Sbjct: 302 KRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKC 361
Query: 216 GRIEDAQWHFNQMQERERDVSSWTTIV 242
G +++A+ F +MQ +DV SWT ++
Sbjct: 362 GLVDEAEKCFAEMQ--LKDVISWTVVI 386
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 119/237 (50%), Gaps = 23/237 (9%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
IHG+ + S F + S + K G ARK FDQ+ E+ M W ++I
Sbjct: 232 IHGF-----LVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLIL 286
Query: 84 GYIKCGMIKEARKLFDQMAERDTRL----WTTMLNGYIECGMIKEARKL----FDGPDAE 135
GY + G EA LF ++ E ++++ ++++ + + ++++ +++ P
Sbjct: 287 GYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGL 346
Query: 136 KSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
++ S +++V+ Y+K ++EAE+ F EM + +SW +++ GYG++G +K++ +F M
Sbjct: 347 ET-SVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEM 405
Query: 196 ----PEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERER---DVSSWTTIVDCL 245
EP+ V + ++ A G I++ + F+++ E V + +VD L
Sbjct: 406 LRHNIEPDE--VCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLL 460
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 87/185 (47%), Gaps = 17/185 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N I CK A KVFD MPER++ W +++G++ G +K + LF +M +
Sbjct: 45 NYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIY 104
Query: 108 ----LWTTMLNGYIECGMIKEARKLFD------GPDAEKSVSTWSTMVNGYVKINQIEEA 157
++T L CG++ K E V +++V+ Y K +I EA
Sbjct: 105 PNEFTFSTNLKA---CGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEA 161
Query: 158 ERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP---ER-NVVSWNTIIKALV 213
E++F + +R +SWN M+ G+ G KALD F M E ER + + +++KA
Sbjct: 162 EKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACS 221
Query: 214 RCGRI 218
G I
Sbjct: 222 STGMI 226
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 22/196 (11%)
Query: 51 ISRLC-KEGRTDHARKVFDQMPERDMRL----WDTMINGYIKCGMIKEARKLFDQMAERD 105
I R+C ++G +D +V + + L + +I+ Y KC A K+FD M ER+
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 106 TRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS---TWSTMVNGYVKINQIEEAERL-- 160
W+ +++G++ G +K + LF + T+ST + +N +E+ ++
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 161 ------FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVR 214
F M E N ++ Y + G+I +A +FRR+ + R+++SWN +I V
Sbjct: 132 FCLKIGFEMMVE----VGNSLVDMYSKCGRINEAEKVFRRIVD--RSLISWNAMIAGFVH 185
Query: 215 CGRIEDAQWHFNQMQE 230
G A F MQE
Sbjct: 186 AGYGSKALDTFGMMQE 201
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 101/234 (43%), Gaps = 52/234 (22%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
IH Y RT+L S N + L K GR D AR++FD+MPERD W+TMI
Sbjct: 20 IHSYAD-RTKLHS-----------NLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIV 67
Query: 84 GYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF-----DGPDAEK-- 136
Y + +A KLF ++T W +++GY + G EA LF DG +
Sbjct: 68 AYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYT 127
Query: 137 --SVSTWST-------------------------MVNG----YVKINQIEEAERLFYEMP 165
SV T +VNG Y + +I EAE LF M
Sbjct: 128 LGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETME 187
Query: 166 -ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRI 218
E+ +V+W M+ GY QNG KA++ FR + E N + T L C +
Sbjct: 188 GEKNNVTWTSMLTGYSQNGFAFKAIECFRDL-RREGNQSNQYTFPSVLTACASV 240
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 19/209 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM----AE 103
N+ + K G D A KVF+ M E+D+ W ++ G G EA KLF M
Sbjct: 368 NALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGIT 427
Query: 104 RDTRLWTTMLNGYIECGMIKEARKL---FDGPDAEKSVSTWSTMVNGYVKINQIEEAERL 160
D + ++L+ E +++ +++ + S+S +++V Y K +E+A +
Sbjct: 428 PDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVI 487
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM-------PEPERNVVSWNTIIKALV 213
F M R ++W ++ GY +NG +E A F M P PE + +I
Sbjct: 488 FNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEH----YACMIDLFG 543
Query: 214 RCGRIEDAQWHFNQMQERERDVSSWTTIV 242
R G + +QM E E D + W I+
Sbjct: 544 RSGDFVKVEQLLHQM-EVEPDATVWKAIL 571
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 101/233 (43%), Gaps = 49/233 (21%)
Query: 55 CKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLN 114
C+E + AR + + M D+ W++MI G ++ G+I EA +F +M ERD ++ +
Sbjct: 275 CRE--MESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIP 332
Query: 115 GYIEC-GMIKEARKLFDGPDAEKSVSTWST-------MVNGYVKINQIEEAERLFYEMPE 166
+ C + + K+ + ++T +V+ Y K ++ A ++F M E
Sbjct: 333 SILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIE 392
Query: 167 RKDVSWNIMMGGYGQNGQIEKALDLFRRM----PEPERNVVSW----------------- 205
+ +SW ++ G NG ++AL LF M P++ V +
Sbjct: 393 KDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQV 452
Query: 206 ----------------NTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
N+++ +CG +EDA FN M+ RD+ +WT ++
Sbjct: 453 HGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSME--IRDLITWTCLI 503
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 35 ASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEA 94
AS S + E+ L + G+ H + P + + ++++ Y KCG +++A
Sbjct: 434 ASVLSASAELT--------LLEFGQQVHGNYIKSGFPS-SLSVNNSLVTMYTKCGSLEDA 484
Query: 95 RKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVST----WSTMVNGYVK 150
+F+ M RD WT ++ GY + G++++A++ FD ++ ++ M++ + +
Sbjct: 485 NVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGR 544
Query: 151 INQIEEAERLFYEMPERKDVS-WNIMMGGYGQNGQIEKALDLFRRMPEPE-RNVVSWNTI 208
+ E+L ++M D + W ++ ++G IE + + E E N V + +
Sbjct: 545 SGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQL 604
Query: 209 IKALVRCGRIEDA 221
GR ++A
Sbjct: 605 SNMYSAAGRQDEA 617
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 82/187 (43%), Gaps = 17/187 (9%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
+HG ++++ S+ S+N NS ++ K G + A +F+ M RD+ W +I
Sbjct: 452 VHG-NYIKSGFPSSLSVN------NSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIV 504
Query: 84 GYIKCGMIKEARKLFDQM-----AERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSV 138
GY K G++++A++ FD M + M++ + G + +L + E
Sbjct: 505 GYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDA 564
Query: 139 STWSTMVNGYVKINQIEEAERL---FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
+ W ++ K IE ER E+ V + + Y G+ ++A ++ R M
Sbjct: 565 TVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLM 624
Query: 196 PEPERNV 202
RN+
Sbjct: 625 --KSRNI 629
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 150 KINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTII 209
K +++EA ++F +MPER + +WN M+ Y + ++ A LFR P +N +SWN +I
Sbjct: 40 KSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFR--SNPVKNTISWNALI 97
Query: 210 KALVRCGRIEDAQWHFNQMQ 229
+ G +A F +MQ
Sbjct: 98 SGYCKSGSKVEAFNLFWEMQ 117
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 114/218 (52%), Gaps = 15/218 (6%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEAR 95
+N ++ N+ IS KEG+ A K+ D+M R D +++MI G+ K +A+
Sbjct: 362 INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK 421
Query: 96 KLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSV---STWSTMVNGYVKIN 152
+FD MA D + T+++ Y + E +L V +T++T+++G+ +++
Sbjct: 422 HMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVD 481
Query: 153 QIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFR--RMPEPERNVVSWN 206
+ A+ LF EM ++ NI++ G+ +N ++E+AL+LF +M + + + V++N
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541
Query: 207 TIIKALVRCGRIEDAQWHFNQM--QERERDVSSWTTIV 242
II + + ++++A F + E DV ++ ++
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 108/214 (50%), Gaps = 23/214 (10%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
NS I CK R D A+ +FD M D+ ++T+I+ Y + + E +L +++ R
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464
Query: 105 -DTRLWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTMVNGYVKINQIEE 156
+T + T+++G+ E + A+ LF PD T + ++ G+ + ++EE
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT----ITCNILLYGFCENEKLEE 520
Query: 157 AERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMP--EPERNVVSWNTIIK 210
A LF + K V++NI++ G + ++++A DLF +P E +V ++N +I
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Query: 211 ALVRCGRIEDAQWHFNQMQE--RERDVSSWTTIV 242
I DA F++M++ E D S++ T++
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 21/198 (10%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
++ I RLCK+G A+ +F +M E+ ++ ++ MI+G+ G +A++L M E
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDG-------PDAEKSVSTWSTMVNGYVKIN 152
R D + +++ ++ G + EA KL D PD T+++M+ G+ K N
Sbjct: 360 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT----VTYNSMIYGFCKHN 415
Query: 153 QIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIK 210
+ ++A+ +F M V++N ++ Y + ++++ + L R + N ++NT+I
Sbjct: 416 RFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIH 475
Query: 211 ALVRCGRIEDAQWHFNQM 228
+ AQ F +M
Sbjct: 476 GFCEVDNLNAAQDLFQEM 493
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 89/210 (42%), Gaps = 31/210 (14%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ + LC E R A +F M E G++ EA LFDQM E
Sbjct: 180 NTLLHGLCLEDRISEALALFGYMVE----------TGFL------EAVALFDQMVEIGLT 223
Query: 108 ----LWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERL 160
+ T++NG G + EA L + G V T+ T+VNG K+ + A L
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 161 FYEMPE---RKDVS-WNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVR 214
+M E + DV ++ ++ ++G A LF M E NV ++N +I
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 215 CGRIEDAQWHFNQMQERE--RDVSSWTTIV 242
GR DAQ M ERE DV ++ ++
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALI 373
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 101/218 (46%), Gaps = 44/218 (20%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
+T+ R N + L + G+ ARKV+D+MP ++ +TMI+G++K G + AR LFD
Sbjct: 44 FDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFD 103
Query: 100 QMAERDTRLWTTMLNGYIECGMIKEARKLFD----------------------------- 130
M +R WT ++ Y EA KLF
Sbjct: 104 AMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQ 163
Query: 131 -------------GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMG 177
G D ++ + ++ Y ++ +++ A LF E+PE+ V++N ++
Sbjct: 164 NAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLIT 223
Query: 178 GYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALV 213
GY ++G +++ LF +M + + + +++ ++KA+V
Sbjct: 224 GYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVV 261
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 41/212 (19%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYI 117
GR H + + + + + +++++ Y KC M +EA +F + +R T WT +++GY+
Sbjct: 370 GRQLHCQALL-ATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYV 428
Query: 118 ECGMIKEARKLFD---GPDAEKSVSTWST------------------------------- 143
+ G+ KLF G + ST++T
Sbjct: 429 QKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVF 488
Query: 144 ----MVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP- 198
+V+ Y K I++A ++F EMP+R VSWN ++ + NG E A+ F +M E
Sbjct: 489 SGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESG 548
Query: 199 -ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
+ + VS ++ A CG +E +F M
Sbjct: 549 LQPDSVSILGVLTACSHCGFVEQGTEYFQAMS 580
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 99/253 (39%), Gaps = 46/253 (18%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE 93
L+ T + + N + K R R +FD+MPE D ++ +I+ Y + +
Sbjct: 275 LSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEA 334
Query: 94 ARKLFDQMA----ERDTRLWTTMLNGYIECGMIKEARKLFDGP---DAEKSVSTWSTMVN 146
+ F +M +R + TML+ ++ R+L A+ + +++V+
Sbjct: 335 SLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVD 394
Query: 147 GYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE------- 199
Y K EEAE +F +P+R VSW ++ GY Q G L LF +M
Sbjct: 395 MYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQST 454
Query: 200 ------------------------------RNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
NV S + ++ +CG I+DA F +M
Sbjct: 455 FATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP 514
Query: 230 ERERDVSSWTTIV 242
+R+ SW ++
Sbjct: 515 --DRNAVSWNALI 525
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 7/165 (4%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
F N + N + C+ R D A +F+++PE+D ++T+I GY K G+ E+ L
Sbjct: 178 FDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHL 237
Query: 98 FDQMAERDTRLWTTMLNGYIEC-------GMIKEARKLFDGPDAEKSVSTWSTMVNGYVK 150
F +M + + +G ++ + ++ L + S + +++ Y K
Sbjct: 238 FLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSK 297
Query: 151 INQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
+++ E LF EMPE VS+N+++ Y Q Q E +L FR M
Sbjct: 298 HDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREM 342
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 12/220 (5%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
F N E++ C + I+ K G+ +A++VFD +++ L T+++ Y + +EA L
Sbjct: 266 FGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNL 325
Query: 98 FDQMAERDT----RLWTTMLNGYIECGMIKEA---RKLFDGPDAEKSVSTWSTMVNGYVK 150
F +M ++ + +LN E ++K+ L V + +VN Y K
Sbjct: 326 FSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAK 385
Query: 151 INQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTI 208
IE+A + F M R V+WN M+ G +G +AL+ F RM N +++ +
Sbjct: 386 SGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGV 445
Query: 209 IKALVRCGRIEDAQWHFNQMQER---ERDVSSWTTIVDCL 245
++A G +E +FNQ+ ++ + D+ +T IV L
Sbjct: 446 LQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLL 485
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 10/166 (6%)
Query: 54 LCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTML 113
L K+G H V + + + ++N Y K G I++ARK F M RD W TM+
Sbjct: 353 LLKQGDLLHGL-VLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMI 411
Query: 114 NGYIECGMIKEARKLFDGPDAEKSVS---TWSTMVNGYVKINQIEEAERLFYEMPERKDV 170
+G G+ +EA + FD + T+ ++ I +E+ F ++ ++ DV
Sbjct: 412 SGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDV 471
Query: 171 SWNI-----MMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKA 211
+I ++G + G + A D R P E +VV+W T++ A
Sbjct: 472 QPDIQHYTCIVGLLSKAGMFKDAEDFMRTAP-IEWDVVAWRTLLNA 516
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 13/170 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM-----A 102
NS I+ K T ARK+FD MPER++ W M+ GY G E KLF M +
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES 132
Query: 103 ERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTW----STMVNGYVKINQIEEAE 158
+ + T + G I+E ++ F G + + + +T+V Y + EA
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEGKQ-FHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAI 191
Query: 159 RLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTI 208
R+ ++P ++ + GY + G ++ LD+ R+ + WN +
Sbjct: 192 RVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANED---FVWNNL 238
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER--DMRLWDTMINGYIKCGMIKEARKL 97
LN +K C + S + G + HA + R D +++IN Y+KC ARKL
Sbjct: 34 LNELLKVCAN--SSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKL 91
Query: 98 FDQMAERDTRLWTTMLNGYIECGMIKEARKLF 129
FD M ER+ W M+ GY G E KLF
Sbjct: 92 FDLMPERNVVSWCAMMKGYQNSGFDFEVLKLF 123
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 142 STMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM---PEP 198
++++N YVK + A +LF MPER VSW MM GY +G + L LF+ M E
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES 132
Query: 199 ERNVVSWNTIIKALVRCGRIEDA-QWH 224
N + K+ GRIE+ Q+H
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEGKQFH 159
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 107/200 (53%), Gaps = 17/200 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
+S I LC +G+ D K+ +M R D+ + +I+ ++K G + EA++L+++M
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 343
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
R DT + ++++G+ + + EA ++FD E + T+S ++N Y K ++++
Sbjct: 344 RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDD 403
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWNTIIK 210
RLF E+ + +++N ++ G+ Q+G++ A +LF+ M +VV++ ++
Sbjct: 404 GMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLD 463
Query: 211 ALVRCGRIEDAQWHFNQMQE 230
L G + A F +MQ+
Sbjct: 464 GLCDNGELNKALEIFEKMQK 483
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 23/217 (10%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
++ ++ C EGR A + D+M E D+ T+ING G + EA L D+M E
Sbjct: 144 STLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVE 203
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKINQIEE 156
D + +LN + G A LF + + + SV +S +++ K ++
Sbjct: 204 YGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDD 263
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERN----VVSWNTI 208
A LF EM + V+++ ++GG +G+ + + R M RN VV+++ +
Sbjct: 264 ALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM--IGRNIIPDVVTFSAL 321
Query: 209 IKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVD 243
I V+ G++ +A+ +N+M R D ++ +++D
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID 358
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 99/198 (50%), Gaps = 17/198 (8%)
Query: 51 ISRLCKEGRTDHARKVFDQMPERDMRL----WDTMINGYIKCGMIKEARKLFDQM----A 102
++RLCK G + A +F +M ER+++ + +I+ K G +A LF++M
Sbjct: 217 LNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGI 276
Query: 103 ERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAER 159
+ D +++++ G G + K+ G + V T+S +++ +VK ++ EA+
Sbjct: 277 KADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKE 336
Query: 160 LFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALV 213
L+ EM R +++N ++ G+ + + +A +F M E ++V+++ +I +
Sbjct: 337 LYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYC 396
Query: 214 RCGRIEDAQWHFNQMQER 231
+ R++D F ++ +
Sbjct: 397 KAKRVDDGMRLFREISSK 414
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 92/179 (51%), Gaps = 17/179 (9%)
Query: 50 FISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAER- 104
I+ CK R D ++F ++ + + ++T++ G+ + G + A++LF +M R
Sbjct: 391 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 450
Query: 105 ---DTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNGYVKINQIEEAE 158
+ +L+G + G + +A ++F+ + + ++ +++G +++++A
Sbjct: 451 VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAW 510
Query: 159 RLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKA 211
LF + ++ V++N+M+GG + G + +A LFR+M E + ++N +I+A
Sbjct: 511 SLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 36/182 (19%)
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG 131
E D + T++NG+ G + EA L D+M E R
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR------------------------ 172
Query: 132 PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEK 187
PD + T ST++NG ++ EA L M E +V++ ++ ++G
Sbjct: 173 PD----LVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 228
Query: 188 ALDLFRRMPE--PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVD 243
ALDLFR+M E + +VV ++ +I +L + G +DA FN+M+ + + DV ++++++
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 244 CL 245
L
Sbjct: 289 GL 290
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 112/214 (52%), Gaps = 19/214 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ I C GR D K+ M +R ++ + +I+ ++K G ++EA +L +M +
Sbjct: 302 NTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ 361
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
R +T + ++++G+ + ++EA ++ D + + T++ ++NGY K N+I++
Sbjct: 362 RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDD 421
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWNTIIK 210
LF EM R V++N ++ G+ Q+G++E A LF+ M ++VS+ ++
Sbjct: 422 GLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLD 481
Query: 211 ALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIV 242
L G +E A F ++++ E D+ + I+
Sbjct: 482 GLCDNGELEKALEIFGKIEKSKMELDIGIYMIII 515
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 116/215 (53%), Gaps = 19/215 (8%)
Query: 50 FISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFDQMAER- 104
I LCK+G D+A +F++M + D+ ++T+I G+ G + KL M +R
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 105 ---DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAE 158
+ ++ +++ +++ G ++EA +L + T++++++G+ K N++EEA
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 159 RLFYEMPERK---DV-SWNIMMGGYGQNGQIEKALDLFRRMP--EPERNVVSWNTIIKAL 212
++ M + D+ ++NI++ GY + +I+ L+LFR M N V++NT+++
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448
Query: 213 VRCGRIEDAQWHFNQMQERER--DVSSWTTIVDCL 245
+ G++E A+ F +M R D+ S+ ++D L
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL 483
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 92/181 (50%), Gaps = 17/181 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N I+ CK R D ++F +M R + ++T++ G+ + G ++ A+KLF +M
Sbjct: 407 NILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVS 466
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNGYVKINQIEE 156
R D + +L+G + G +++A ++F + K + + +++G +++++
Sbjct: 467 RRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDD 526
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIK 210
A LF +P + ++NIM+ + + KA LFR+M E + +++N +I+
Sbjct: 527 AWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIR 586
Query: 211 A 211
A
Sbjct: 587 A 587
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ ++ LC E R A ++ D+M E + +T++NG G + +A L D+M E
Sbjct: 162 NTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVE 221
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKINQIEE 156
+ + +LN + G A +L + + + +S +++G K ++
Sbjct: 222 TGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDN 281
Query: 157 AERLFYEMP----ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIK 210
A LF EM + +++N ++GG+ G+ + L R M + + NVV+++ +I
Sbjct: 282 AFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLID 341
Query: 211 ALVRCGRIEDAQWHFNQMQER 231
+ V+ G++ +A +M +R
Sbjct: 342 SFVKEGKLREADQLLKEMMQR 362
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 89/187 (47%), Gaps = 15/187 (8%)
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR----LWTTMLNGYIECGMIKEARK 127
E D +++T++NG + EA +L D+M E + T++NG G + +A
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVV 214
Query: 128 LFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK----DVSWNIMMGGYG 180
L D + + T+ ++N K Q A L +M ER V ++I++ G
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 181 QNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE--RDVS 236
++G ++ A +LF M + +++++NT+I GR +D M +R+ +V
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 334
Query: 237 SWTTIVD 243
+++ ++D
Sbjct: 335 TFSVLID 341
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 110/211 (52%), Gaps = 13/211 (6%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
NS + G A KVFD+MPE+D+ W+++ING+ + G +EA L+ +M +
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 105 -DTRLWTTMLNGYIECGMIKEARKL---FDGPDAEKSVSTWSTMVNGYVKINQIEEAERL 160
D ++L+ + G + +++ +++ + + +++ Y + ++EEA+ L
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNV---VSWNTIIKALVRCGR 217
F EM ++ VSW ++ G NG ++A++LF+ M E + +++ I+ A CG
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 218 IEDAQWHFNQMQER---ERDVSSWTTIVDCL 245
+++ +F +M+E E + + +VD L
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 237
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPE----RDMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
S +S K G ++V M + R++ + +++ Y +CG ++EA+ LFD+M ++
Sbjct: 94 SLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK 153
Query: 105 DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSV----STWSTMVNGYVKINQIEEAERL 160
++ WT+++ G G KEA +LF ++ + + T+ ++ ++E
Sbjct: 154 NSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEY 213
Query: 161 FYEMPERKDVS-----WNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRC 215
F M E + + M+ + GQ++KA + + MP + NVV W T++ A
Sbjct: 214 FRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP-MQPNVVIWRTLLGACTVH 272
Query: 216 GRIEDAQWHFNQMQERE 232
G + A++ Q+ + E
Sbjct: 273 GDSDLAEFARIQILQLE 289
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF 98
L + N + + GR + A+ +FD+M +++ W ++I G G KEA +LF
Sbjct: 119 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 178
Query: 99 DQMAERDTRL-----WTTMLNGYIECGMIKEA----RKLFDGPDAEKSVSTWSTMVNGYV 149
M + L + +L CGM+KE R++ + E + + MV+
Sbjct: 179 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 238
Query: 150 KINQIEEAERLFYEMPERKDVS-WNIMMGGYGQNGQIEKA 188
+ Q+++A MP + +V W ++G +G + A
Sbjct: 239 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 278
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 114/218 (52%), Gaps = 15/218 (6%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEAR 95
+N ++ N+ IS KEG+ A K+ D+M R D +++MI G+ K +A+
Sbjct: 362 INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK 421
Query: 96 KLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSV---STWSTMVNGYVKIN 152
+FD MA D + T+++ Y + E +L V +T++T+++G+ +++
Sbjct: 422 HMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVD 481
Query: 153 QIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFR--RMPEPERNVVSWN 206
+ A+ LF EM ++ NI++ G+ +N ++E+AL+LF +M + + + V++N
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541
Query: 207 TIIKALVRCGRIEDAQWHFNQM--QERERDVSSWTTIV 242
II + + ++++A F + E DV ++ ++
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 108/214 (50%), Gaps = 23/214 (10%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
NS I CK R D A+ +FD M D+ ++T+I+ Y + + E +L +++ R
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464
Query: 105 -DTRLWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTMVNGYVKINQIEE 156
+T + T+++G+ E + A+ LF PD T + ++ G+ + ++EE
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT----ITCNILLYGFCENEKLEE 520
Query: 157 AERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMP--EPERNVVSWNTIIK 210
A LF + K V++NI++ G + ++++A DLF +P E +V ++N +I
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Query: 211 ALVRCGRIEDAQWHFNQMQE--RERDVSSWTTIV 242
I DA F++M++ E D S++ T++
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 21/198 (10%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
++ I RLCK+G A+ +F +M E+ ++ ++ MI+G+ G +A++L M E
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDG-------PDAEKSVSTWSTMVNGYVKIN 152
R D + +++ ++ G + EA KL D PD T+++M+ G+ K N
Sbjct: 360 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT----VTYNSMIYGFCKHN 415
Query: 153 QIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIK 210
+ ++A+ +F M V++N ++ Y + ++++ + L R + N ++NT+I
Sbjct: 416 RFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIH 475
Query: 211 ALVRCGRIEDAQWHFNQM 228
+ AQ F +M
Sbjct: 476 GFCEVDNLNAAQDLFQEM 493
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 89/210 (42%), Gaps = 31/210 (14%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ + LC E R A +F M E G++ EA LFDQM E
Sbjct: 180 NTLLHGLCLEDRISEALALFGYMVE----------TGFL------EAVALFDQMVEIGLT 223
Query: 108 ----LWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERL 160
+ T++NG G + EA L + G V T+ T+VNG K+ + A L
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 161 FYEMPE---RKDVS-WNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVR 214
+M E + DV ++ ++ ++G A LF M E NV ++N +I
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 215 CGRIEDAQWHFNQMQERE--RDVSSWTTIV 242
GR DAQ M ERE DV ++ ++
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALI 373
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 85/162 (52%), Gaps = 10/162 (6%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYI--ECG 120
A KVFD+M ER++ W TM++GY G +A +L+ +M + + + + CG
Sbjct: 59 AHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACG 118
Query: 121 MIKEAR------KLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNI 174
++ + + + + V +++V+ YVK ++ EA F E+ SWN
Sbjct: 119 LVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNT 178
Query: 175 MMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCG 216
++ GY + G +++A+ LF RMP+P NVVSWN +I V G
Sbjct: 179 LISGYCKAGLMDEAVTLFHRMPQP--NVVSWNCLISGFVDKG 218
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA----ERDTRLWTTML 113
G A K+F ++P +D+ + +I G +K G A LF ++ + D + + +L
Sbjct: 391 GNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNIL 450
Query: 114 ---NGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV 170
+ G K+ L E T + +V+ YVK +I+ LF M ER V
Sbjct: 451 KVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVV 510
Query: 171 SWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
SW ++ G+GQNG++E+A F +M E N V++ ++ A G +E+A+ M
Sbjct: 511 SWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETM 570
Query: 229 QER---ERDVSSWTTIVDCL 245
+ E + + +VD L
Sbjct: 571 KSEYGLEPYLEHYYCVVDLL 590
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 135 EKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRR 194
++V + +++ YV + +A ++F EM ER V+W M+ GY +G+ KA++L+RR
Sbjct: 37 SQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRR 96
Query: 195 MPEPER---NVVSWNTIIKALVRCGRIEDAQ 222
M + E N ++ ++KA CG + D Q
Sbjct: 97 MLDSEEEAANEFMYSAVLKA---CGLVGDIQ 124
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 87/205 (42%), Gaps = 19/205 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS + K GR A F ++ W+T+I+GY K G++ EA LF +M + +
Sbjct: 146 NSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVV 205
Query: 108 LWTTMLNGYIECG-------MIKEARK--LFDG---PDAEKSVSTWSTMVNGYVKINQIE 155
W +++G+++ G +++ R+ + DG P K+ S + G Q+
Sbjct: 206 SWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMG----KQLH 261
Query: 156 EAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP-EPERNVVSWNTIIKALVR 214
+ E + + ++ Y G + A D+F + +V WN+++ +
Sbjct: 262 CC--VVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLI 319
Query: 215 CGRIEDAQWHFNQMQERERDVSSWT 239
E A W Q+ + + S+T
Sbjct: 320 NEENEAALWLLLQIYQSDLCFDSYT 344
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR- 107
+ + K G+ + A KVF + ++D+ W M+ GY + G + A K+F ++ + +
Sbjct: 433 ALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKP 492
Query: 108 ---LWTTMLNGYIECGMIKEARKLFDG----PDAEKSVSTWSTMVNGYVKINQIEEAERL 160
++++LN K F G + S+ S ++ Y K IE AE +
Sbjct: 493 NEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEV 552
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNV--VSWNTIIKALVRCGRI 218
F E+ VSWN M+ GY Q+GQ KALD+F+ M + + + V++ + A G +
Sbjct: 553 FKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLV 612
Query: 219 EDAQWHFNQM 228
E+ + +F+ M
Sbjct: 613 EEGEKYFDIM 622
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 11/167 (6%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
F ++ S + K RKVFD+M ER++ W T+I+GY + M E L
Sbjct: 122 FGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTL 181
Query: 98 FDQMAERDTR----LWTTMLNGYIECGMIKEARKLF-----DGPDAEKSVSTWSTMVNGY 148
F +M T+ + L E G+ ++ +G D K++ ++++N Y
Sbjct: 182 FMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLD--KTIPVSNSLINLY 239
Query: 149 VKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
+K + +A LF + + V+WN M+ GY NG +AL +F M
Sbjct: 240 LKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM 286
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 39/192 (20%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
HG+ +++RL S+ +++ + ++ K+G + A +VF + E+D+ W++MI+
Sbjct: 517 FHGFA-IKSRLDSSLCVSS------ALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMIS 569
Query: 84 GYIKCGMIKEARKLFDQMAERDTRL-WTTMLNGYIEC---GMIKEARKLFDGPDAEKSVS 139
GY + G +A +F +M +R ++ T + + C G+++E K FD
Sbjct: 570 GYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFD--------- 620
Query: 140 TWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE 199
MV KI +E ++ Y + GQ+EKA+ + MP P
Sbjct: 621 ---IMVRD-CKIAPTKEHNSCMVDL--------------YSRAGQLEKAMKVIENMPNPA 662
Query: 200 RNVVSWNTIIKA 211
+ + W TI+ A
Sbjct: 663 GSTI-WRTILAA 673
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 105/251 (41%), Gaps = 57/251 (22%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
L+ + NS I+ K G AR +FD+ + + W++MI+GY G+ EA +F
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 284
Query: 100 QMAERDTRLWTTMLNGYIE-CGMIKEAR-------------KLFDGPDAEKSVSTWSTMV 145
M RL + I+ C +KE R LFD +++ T ++
Sbjct: 285 SMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFD-----QNIRT--ALM 337
Query: 146 NGYVKINQIEEAERLFYEMPERKD-VSWNIMMGGYGQNGQIEKALDLFRRMPEP------ 198
Y K + +A RLF E+ + VSW M+ G+ QN E+A+DLF M
Sbjct: 338 VAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNE 397
Query: 199 ---------------------------ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER 231
ER+ ++ A V+ G++E+A F+ +
Sbjct: 398 FTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGID-- 455
Query: 232 ERDVSSWTTIV 242
++D+ +W+ ++
Sbjct: 456 DKDIVAWSAML 466
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
Query: 78 WDTMINGYIKCGMIKEARKLFDQMAERDTR----LWTTMLNGYIECGMIKEARKLFDGPD 133
W MI+G+++ +EA LF +M + R ++ +L + E +
Sbjct: 365 WTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA-LPVISPSEVHAQVVKTN 423
Query: 134 AEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFR 193
E+S + + +++ YVK+ ++EEA ++F + ++ V+W+ M+ GY Q G+ E A+ +F
Sbjct: 424 YERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFG 483
Query: 194 RMPE 197
+ +
Sbjct: 484 ELTK 487
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 78/149 (52%), Gaps = 17/149 (11%)
Query: 59 RTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM----AERDTRLWTTMLN 114
R +A +FD+ P RD + +++ G+ + G +EA++LF + E D +++++L
Sbjct: 42 RLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLK 101
Query: 115 GYIECGMIKE--ARKL------FDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPE 166
+ + E R+L F D VS +++V+ Y+K + ++ ++F EM E
Sbjct: 102 --VSATLCDELFGRQLHCQCIKFGFLD---DVSVGTSLVDTYMKGSNFKDGRKVFDEMKE 156
Query: 167 RKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
R V+W ++ GY +N ++ L LF RM
Sbjct: 157 RNVVTWTTLISGYARNSMNDEVLTLFMRM 185
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 57/220 (25%)
Query: 61 DHARKVFDQMPERDMRLWDTMINGY----------------------------------- 85
D+A K+F+QMP+R+ W+T+I G+
Sbjct: 76 DYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVL 135
Query: 86 ---IKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKS- 137
K G I+E +++ + D + + ++ Y+ CG +K+AR LF EK
Sbjct: 136 KACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDM 195
Query: 138 ------------VSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQI 185
+ W+ M++GY+++ + A LF +M +R VSWN M+ GY NG
Sbjct: 196 VVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFF 255
Query: 186 EKALDLFRRMPEPE--RNVVSWNTIIKALVRCGRIEDAQW 223
+ A+++FR M + + N V+ +++ A+ R G +E +W
Sbjct: 256 KDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEW 295
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 12/178 (6%)
Query: 77 LWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF---DGPD 133
LW+ MI+GY++ G K AR LFD+M +R W TM++GY G K+A ++F D
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD 269
Query: 134 AEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKAL 189
+ T +++ ++ +E E L + DV + ++ Y + G IEKA+
Sbjct: 270 IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAI 329
Query: 190 DLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE---RERDVSSWTTIVDC 244
+F R+P NV++W+ +I G+ DA F +M++ R DV+ + C
Sbjct: 330 HVFERLPR--ENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTAC 385
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 95/192 (49%), Gaps = 13/192 (6%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N I + G AR +FD+M +R + W+TMI+GY G K+A ++F +M + D R
Sbjct: 212 NVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIR 271
Query: 108 L-WTTMLN--------GYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAE 158
+ T+++ G +E G G + + S +++ Y K IE+A
Sbjct: 272 PNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG--SALIDMYSKCGIIEKAI 329
Query: 159 RLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCG 216
+F +P ++W+ M+ G+ +GQ A+D F +M + + V++ ++ A G
Sbjct: 330 HVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGG 389
Query: 217 RIEDAQWHFNQM 228
+E+ + +F+QM
Sbjct: 390 LVEEGRRYFSQM 401
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 11/194 (5%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER-DMRLWDTMINGYIKCGMIKEARKL---FDQMAE 103
N+ I+ K G D K+F +M ER D W++MI+GYI ++ +A L Q +
Sbjct: 556 NALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQ 615
Query: 104 R-DTRLWTTMLNGYIECGMIK---EARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
R D+ ++ T+L+ + ++ E E V S +V+ Y K +++ A R
Sbjct: 616 RLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALR 675
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP---EPERNVVSWNTIIKALVRCG 216
F MP R SWN M+ GY ++GQ E+AL LF M + + V++ ++ A G
Sbjct: 676 FFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAG 735
Query: 217 RIEDAQWHFNQMQE 230
+E+ HF M +
Sbjct: 736 LLEEGFKHFESMSD 749
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF- 98
L T++ + +S K G +ARKVF+QM R+ + ++ G ++ +EA KLF
Sbjct: 239 LLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFM 298
Query: 99 --DQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVST----------WSTMVN 146
+ M + + +L+ + E + +E L G + V T + +VN
Sbjct: 299 DMNSMIDVSPESYVILLSSFPEYSLAEEV-GLKKGREVHGHVITTGLVDFMVGIGNGLVN 357
Query: 147 GYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWN 206
Y K I +A R+FY M ++ VSWN M+ G QNG +A++ ++ M + S+
Sbjct: 358 MYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSF- 416
Query: 207 TIIKALVRCGRIE 219
T+I +L C ++
Sbjct: 417 TLISSLSSCASLK 429
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 84/170 (49%), Gaps = 11/170 (6%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
K+GR H + + + + + + ++N Y KCG I +AR++F M ++D+ W +M+ G
Sbjct: 330 KKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITG 389
Query: 116 YIECGMIKEARKLFDG-------PDAEKSVSTWSTMVN-GYVKINQIEEAERLFYEMPER 167
+ G EA + + P + +S+ S+ + + K+ Q E L +
Sbjct: 390 LDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLN 449
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGR 217
VS N +M Y + G + + +F MPE ++ VSWN+II AL R R
Sbjct: 450 VSVS-NALMTLYAETGYLNECRKIFSSMPEHDQ--VSWNSIIGALARSER 496
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 94/242 (38%), Gaps = 50/242 (20%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N ++ K G AR+VF M ++D W++MI G + G EA + + M D
Sbjct: 353 NGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL 412
Query: 108 LWT-TMLNGYIECGMIKEAR--------KLFDGPDAEKSVSTWSTMVNGYVKINQIEEAE 158
+ T+++ C +K A+ L G D SVS + ++ Y + + E
Sbjct: 413 PGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVS--NALMTLYAETGYLNECR 470
Query: 159 RLFYEMPERKDVSWNIMMGGYGQN------------------------------------ 182
++F MPE VSWN ++G ++
Sbjct: 471 KIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSL 530
Query: 183 --GQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTT 240
G++ K + + N +I +CG ++ + F++M ER RD +W +
Sbjct: 531 SFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAER-RDNVTWNS 589
Query: 241 IV 242
++
Sbjct: 590 MI 591
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 11/177 (6%)
Query: 29 FLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKC 88
F +RL L+ ++ CN+ I+ + G + ARKVFD+MP R+ W +++GY +
Sbjct: 22 FFHSRLYKN-RLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRN 80
Query: 89 GMIKEARKLFDQMAER----DTRLWTTMLNGYIECGMI-----KEARKLFDGPDAEKSVS 139
G KEA M + + + ++L E G + ++ L
Sbjct: 81 GEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAV 140
Query: 140 TWSTMVNGYVK-INQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
+ +++ Y K I + A F ++ + VSWN ++ Y Q G A +F M
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM 197
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 13/182 (7%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYI 117
R H+R ++ ++D+ L + +IN Y++ G ARK+FD+M R+ W +++GY
Sbjct: 20 ARFFHSR-LYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYS 78
Query: 118 ECGMIKEARKLFDGPDAEKSVSTWSTMVN--------GYVKINQIEEAERLFYEMPERKD 169
G KEA E S V+ G V I + L +++ D
Sbjct: 79 RNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVD 138
Query: 170 -VSWNIMMGGYGQN-GQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQ 227
V N+++ Y + G + AL F + +N VSWN+II + G A F+
Sbjct: 139 AVVSNVLISMYWKCIGSVGYALCAFGDIEV--KNSVSWNSIISVYSQAGDQRSAFRIFSS 196
Query: 228 MQ 229
MQ
Sbjct: 197 MQ 198
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 100/238 (42%), Gaps = 43/238 (18%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL 108
IS + G D KVF+ +P D M+ +CG + ARKLF+ M ERD
Sbjct: 148 GLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIA 207
Query: 109 WTTMLNGYIECGMIKEARKLFDGPDAEK-------------------------------- 136
W M++GY + G +EA +F E
Sbjct: 208 WNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIE 267
Query: 137 ------SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALD 190
+V +T+V+ Y K +E+A +F+ M E+ +W+ + G NG EK L+
Sbjct: 268 RNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLE 327
Query: 191 LFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER---ERDVSSWTTIVD 243
LF M + N V++ ++++ G +++ Q HF+ M+ E + + +VD
Sbjct: 328 LFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVD 385
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 27/236 (11%)
Query: 27 YPFLRTRLAS-------TFSLNTEMKRCNSFISRLCKEGRTDHA---RKVFDQMPERDMR 76
+ F R L+S +++N ++ C R+ + G H R+ FD P
Sbjct: 91 FDFYRRILSSGNDLKPDNYTVNFLVQACTGL--RMRETGLQVHGMTIRRGFDNDPH---- 144
Query: 77 LWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEK 136
+ +I+ Y + G + K+F+ + D T M+ CG + ARKLF+G E+
Sbjct: 145 VQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGM-PER 203
Query: 137 SVSTWSTMVNGYVKINQIEEAERLFYEMP-ERKDVSWNIMMGGYGQNGQIEKALDLFR-R 194
W+ M++GY ++ + EA +F+ M E V+ M+ Q+ ALD R
Sbjct: 204 DPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQL-GALDQGRWA 262
Query: 195 MPEPERNVVS-----WNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
ERN + T++ +CG +E A F M+ E++V +W++ ++ L
Sbjct: 263 HSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGME--EKNVYTWSSALNGL 316
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 108/229 (47%), Gaps = 27/229 (11%)
Query: 13 MHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPE 72
+HAH + T L Y LRTRL + +C+ + ARKV D+MPE
Sbjct: 74 VHAHMIKTRYLPATY--LRTRLLIFYG------KCDCL----------EDARKVLDEMPE 115
Query: 73 RDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR----LWTTMLNGYIEC---GMIKEA 125
+++ W MI+ Y + G EA +F +M D + + T+L I G+ K+
Sbjct: 116 KNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQI 175
Query: 126 RKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQI 185
L + + + S++++ Y K QI+EA +F +PER VS ++ GY Q G
Sbjct: 176 HGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLD 235
Query: 186 EKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE 232
E+AL++F R+ N V++ +++ AL ++ + + RE
Sbjct: 236 EEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRE 284
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 10/208 (4%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
+S + K G+ AR++F+ +PERD+ +I GY + G+ +EA ++F ++
Sbjct: 192 SSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMS 251
Query: 108 -------LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERL 160
T L+G K+A + +++++ Y K + A RL
Sbjct: 252 PNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRL 311
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRC--GRI 218
F MPER +SWN M+ GY ++G + L+LFR M + +R T++ L C GR+
Sbjct: 312 FDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRM 371
Query: 219 EDAQWH-FNQMQERERDVSSWTTIVDCL 245
ED + F+ M E T C+
Sbjct: 372 EDTGLNIFDGMVAGEYGTKPGTEHYGCI 399
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 80/171 (46%), Gaps = 15/171 (8%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLW----DTMINGYIKCGMIKEARKLFDQMAER 104
S ++ L DH ++ + R++ + +++I+ Y KCG + AR+LFD M ER
Sbjct: 259 SLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPER 318
Query: 105 DTRLWTTMLNGYIECGMIKEARKLFD--------GPDAEKSVSTWSTMVNGYVKINQIEE 156
W ML GY + G+ +E +LF PDA ++ S +G ++ +
Sbjct: 319 TAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNI 378
Query: 157 AERLFYEMPERKDVS--WNIMMGGYGQNGQIEKALDLFRRMP-EPERNVVS 204
+ + K + + ++ G+ G+I++A + +RMP +P V+
Sbjct: 379 FDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLG 429
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 10/130 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
NS I K G +AR++FD MPER W+ M+ GY K G+ +E +LF M +
Sbjct: 293 NSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRV 352
Query: 105 --DTRLWTTMLNGYIECGMIKEARKLFDGPDA-----EKSVSTWSTMVNGYVKINQIEEA 157
D +L+G M +FDG A + + +V+ + +I+EA
Sbjct: 353 KPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEA 412
Query: 158 ERLFYEMPER 167
MP +
Sbjct: 413 FEFIKRMPSK 422
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 119/214 (55%), Gaps = 19/214 (8%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
+ I K G+ A+++++ M + D+ + ++ING G++ EAR++F M
Sbjct: 263 ALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERN 322
Query: 105 ----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS---TWSTMVNGYVKINQIEEA 157
+ ++TT+++G+ + +++ K+F + V+ T++ ++ GY + + + A
Sbjct: 323 GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVA 382
Query: 158 ERLFYEMPERK---DV-SWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIKA 211
+ +F +M R+ D+ ++N+++ G NG++EKAL +F M + E N+V++ II+
Sbjct: 383 QEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQG 442
Query: 212 LVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVD 243
+ + G++EDA F + + + +V ++TT++
Sbjct: 443 MCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMIS 476
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 120/216 (55%), Gaps = 23/216 (10%)
Query: 48 NSFISRLCKEGR-TDHARKVFDQMPER---DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ ++ LC+ GR D A + D M R ++ + +I+ ++K G + EA++L++ M +
Sbjct: 227 NALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLF-----DGPDAEKSVSTWSTMVNGYVKINQI 154
D + +++NG G++ EAR++F +G + + ++T+++G+ K ++
Sbjct: 287 MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI--YTTLIHGFCKSKRV 344
Query: 155 EEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWNTI 208
E+ ++FYEM ++ +++ +++ GY G+ + A ++F +M ++ ++N +
Sbjct: 345 EDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVL 404
Query: 209 IKALVRCGRIEDAQWHFNQMQERERDVS--SWTTIV 242
+ L G++E A F M++RE D++ ++T I+
Sbjct: 405 LDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIII 440
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 106/199 (53%), Gaps = 17/199 (8%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAER 104
S I+ LC G D AR++F M ++ T+I+G+ K +++ K+F +M+++
Sbjct: 298 SLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK 357
Query: 105 ----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKS---VSTWSTMVNGYVKINQIEEA 157
+T +T ++ GY G A+++F+ + ++ + T++ +++G ++E+A
Sbjct: 358 GVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKA 417
Query: 158 ERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKA 211
+F M +R+ V++ I++ G + G++E A DLF + + NV+++ T+I
Sbjct: 418 LMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISG 477
Query: 212 LVRCGRIEDAQWHFNQMQE 230
R G I +A F +M+E
Sbjct: 478 FCRRGLIHEADSLFKKMKE 496
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 23/217 (10%)
Query: 50 FISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE----ARKLFDQMA--- 102
+S + K R D +F+QM + N + C + A +M
Sbjct: 89 LLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLG 148
Query: 103 -ERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAE 158
E D +T++LNGY I++A LFD G + +V T++T++ K + A
Sbjct: 149 FEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAV 208
Query: 159 RLFYEMPERKD----VSWNIMMGGYGQNGQIEKAL----DLFRRMPEPERNVVSWNTIIK 210
LF +M V++N ++ G + G+ A D+ +R EP NV+++ +I
Sbjct: 209 ELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEP--NVITFTALID 266
Query: 211 ALVRCGRIEDAQWHFNQMQERER--DVSSWTTIVDCL 245
A V+ G++ +A+ +N M + DV ++ ++++ L
Sbjct: 267 AFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 109/214 (50%), Gaps = 20/214 (9%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER-DMRLWDTMINGYIKCGMIK 92
L N ++ S + G D+AR+VFD+ PE+ ++ LW MI+ Y +
Sbjct: 90 LVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSV 149
Query: 93 EARKLFDQM----AERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEK-----SVSTWST 143
EA +LF +M E D + T L+ + G ++ +++ K ++ ++
Sbjct: 150 EAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNS 209
Query: 144 MVNGYVKINQIEEAERLFYEMPERKDV-SWNIMMGGYGQNGQIEKALDLFRRMP---EPE 199
++N YVK + E+A +LF E RKDV ++ M+ GY NGQ +++L+LF++M + +
Sbjct: 210 LLNMYVKSGETEKARKLFDE-SMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQ 268
Query: 200 RNVVSWN--TIIKALVRC---GRIEDAQWHFNQM 228
V++ N T I L+ C G +E+ + HF M
Sbjct: 269 DTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSM 302
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 85/171 (49%), Gaps = 15/171 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS ++ K G T+ ARK+FD+ +D+ + +MI GY G +E+ +LF +M D
Sbjct: 208 NSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQS 267
Query: 108 LWT-------TMLNGYIEC---GMIKEARKLFDGPDAEKSV----STWSTMVNGYVKINQ 153
T T + + C G+++E ++ F + ++ + + MV+ + +
Sbjct: 268 QDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGH 327
Query: 154 IEEAERLFYEMPERKD-VSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVV 203
+++A +MP + + V W ++G +G +E ++ RR+ E +R+ V
Sbjct: 328 LKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHV 378
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 89/175 (50%), Gaps = 15/175 (8%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG-- 131
D+ L ++++N Y+K G ++ARKLFD+ +D +T+M+ GY G +E+ +LF
Sbjct: 203 DLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMK 262
Query: 132 --PDAEKSVSTWS--TMVNGYVKINQ---IEEAERLFYEMP-----ERKDVSWNIMMGGY 179
++ +V T + T + + + +EE +R F M + ++ + M+ +
Sbjct: 263 TIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLF 322
Query: 180 GQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERD 234
++G ++ A + +MP + N V W T++ A G +E + ++ E +RD
Sbjct: 323 CRSGHLKDAHEFINQMP-IKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRD 376
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 12/225 (5%)
Query: 33 RLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIK 92
+L+ L+ + NS IS CK D A +F ++ R + W+ MI G+ + G
Sbjct: 361 KLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPI 420
Query: 93 EARKLFDQMAER----DTRLWTTMLNGYIECGMIKEAR---KLFDGPDAEKSVSTWSTMV 145
+A F QM R DT + +++ E + A+ + +K+V + +V
Sbjct: 421 DALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALV 480
Query: 146 NGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVV 203
+ Y K I A +F M ER +WN M+ GYG +G + AL+LF M + + N V
Sbjct: 481 DMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGV 540
Query: 204 SWNTIIKALVRCGRIEDAQWHFNQMQER---ERDVSSWTTIVDCL 245
++ ++I A G +E F M+E E + + +VD L
Sbjct: 541 TFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLL 585
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 121/264 (45%), Gaps = 53/264 (20%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
IHGY +R+ S +++T + + K G + AR++FD M ER++ W++MI+
Sbjct: 258 IHGYA-MRSGFDSLVNIST------ALVDMYAKCGSLETARQLFDGMLERNVVSWNSMID 310
Query: 84 GYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYI----ECGMIKEAR---KLFDGPDAEK 136
Y++ KEA +F +M + + + G + + G ++ R KL ++
Sbjct: 311 AYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDR 370
Query: 137 SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM- 195
+VS +++++ Y K +++ A +F ++ R VSWN M+ G+ QNG+ AL+ F +M
Sbjct: 371 NVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMR 430
Query: 196 -----PEP-------------------------------ERNVVSWNTIIKALVRCGRIE 219
P+ ++NV ++ +CG I
Sbjct: 431 SRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIM 490
Query: 220 DAQWHFNQMQERERDVSSWTTIVD 243
A+ F+ M ER V++W ++D
Sbjct: 491 IARLIFDMMSERH--VTTWNAMID 512
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 99/239 (41%), Gaps = 48/239 (20%)
Query: 50 FISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLW 109
+S C+ G D A +VF+ + + L+ TM+ G+ K + +A + F +M D
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPV 134
Query: 110 TTMLNGYIE-CG------MIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFY 162
++ CG + KE L + + + N Y K Q+ EA ++F
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFD 194
Query: 163 EMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKAL---------- 212
MPER VSWN ++ GY QNG AL++ + M E E S+ TI+ L
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCE-ENLKPSFITIVSVLPAVSALRLIS 253
Query: 213 ----------------------------VRCGRIEDAQWHFNQMQERERDVSSWTTIVD 243
+CG +E A+ F+ M ER+V SW +++D
Sbjct: 254 VGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM--LERNVVSWNSMID 310
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 49 SFISRLCKEGRTDHAR----KVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
S I+ + + T HA+ V ++++ + +++ Y KCG I AR +FD M+ER
Sbjct: 443 SVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSER 502
Query: 105 DTRLWTTMLNGYIECGMIKEARKLFD----GPDAEKSVSTWSTMVNGYVKINQIEEAERL 160
W M++GY G K A +LF+ G V T+ ++++ +E +
Sbjct: 503 HVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGV-TFLSVISACSHSGLVEAGLKC 561
Query: 161 FYEMPERKDVS-----WNIMMGGYGQNGQIEKALDLFRRMP-EPERNV 202
FY M E + + M+ G+ G++ +A D +MP +P NV
Sbjct: 562 FYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNV 609
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 41/254 (16%)
Query: 17 KLNTHPLIH--------GYPFLRTRLAS-----TFSLNTEMKRCNSFISRLCKEGRTDHA 63
K + PL+H GY L +L F NT + NS + + A
Sbjct: 52 KPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLS--NSLMRFYKTSDSLEDA 109
Query: 64 RKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT---------------RL 108
KVFD+MP+ D+ W+++++GY++ G +E LF ++ D RL
Sbjct: 110 HKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARL 169
Query: 109 WTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK 168
+ L I ++K + + +V + +++ Y K +++A +F M E+
Sbjct: 170 HLSPLGACIHSKLVKLGLE-------KGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKD 222
Query: 169 DVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
VSWN ++ +NG++E L F +MP P+ V++N +I A V+ G +A + M
Sbjct: 223 TVSWNAIVASCSRNGKLELGLWFFHQMPNPD--TVTYNELIDAFVKSGDFNNAFQVLSDM 280
Query: 229 QERERDVSSWTTIV 242
+ SSW TI+
Sbjct: 281 P--NPNSSSWNTIL 292
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 86/217 (39%), Gaps = 52/217 (23%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ ++ + G+ + F QMP D ++ +I+ ++K G A ++ M ++
Sbjct: 227 NAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSS 286
Query: 108 LWTTMLNGYIECGMIKEARKLFD------------------------------------- 130
W T+L GY+ EA + F
Sbjct: 287 SWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACA 346
Query: 131 ---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEK 187
G D+ V+ S +++ Y K ++ AE +F+ MP + + WN M+ GY +NG +
Sbjct: 347 HKLGLDSRVVVA--SALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIE 404
Query: 188 ALDLFRRMPE-----PERNVVSWNTIIKALVRCGRIE 219
A+ LF ++ + P+R T + L C E
Sbjct: 405 AIKLFNQLKQERFLKPDR-----FTFLNLLAVCSHCE 436
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 93/184 (50%), Gaps = 9/184 (4%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ ++ G+ + AR VFD M RD+ W+TMI+GY + G + +A +FD M
Sbjct: 156 NALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVD 215
Query: 108 L-WTTMLNGYIECGMIKE------ARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERL 160
L T+++ CG +K+ KL + + + +VN Y+K +++EA +
Sbjct: 216 LDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFV 275
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP-EPER-NVVSWNTIIKALVRCGRI 218
F M R ++W M+ GY ++G +E AL+L R M E R N V+ +++ ++
Sbjct: 276 FDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKV 335
Query: 219 EDAQ 222
D +
Sbjct: 336 NDGK 339
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 101/245 (41%), Gaps = 52/245 (21%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ ++ K GR D AR VFD+M RD+ W MINGY + G ++ A +L M R
Sbjct: 257 NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVR 316
Query: 108 LWTTMLNGYIE-CGMIKEARKLFDGP---------DAEKSVSTWSTMVNGYVKINQIEEA 157
+ + CG +A K+ DG + +++++ Y K +++
Sbjct: 317 PNAVTIASLVSVCG---DALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLC 373
Query: 158 ERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIKALV-- 213
R+F + W+ ++ G QN + AL LF+RM + E N+ + N+++ A
Sbjct: 374 FRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAAL 433
Query: 214 ---------------------------------RCGRIEDAQWHFNQMQE--RERDVSSW 238
+CG +E A FN +QE + +DV W
Sbjct: 434 ADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLW 493
Query: 239 TTIVD 243
++
Sbjct: 494 GALIS 498
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 108/246 (43%), Gaps = 60/246 (24%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL 108
S LC G +ARK+F++MP+ + ++ +I Y++ G+ +A +F +M +
Sbjct: 56 SVTYALC--GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVK- 112
Query: 109 WTTMLNGY--------------IECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQI 154
+ +GY ++ G++ R L +K V + ++ Y+ ++
Sbjct: 113 --CVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQ--NALLAMYMNFGKV 168
Query: 155 EEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP------------------ 196
E A +F M R +SWN M+ GY +NG + AL +F M
Sbjct: 169 EMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVC 228
Query: 197 ------EPERNVVSW-------------NTIIKALVRCGRIEDAQWHFNQMQERERDVSS 237
E RNV N ++ ++CGR+++A++ F++M+ RDV +
Sbjct: 229 GHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME--RRDVIT 286
Query: 238 WTTIVD 243
WT +++
Sbjct: 287 WTCMIN 292
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 109/260 (41%), Gaps = 23/260 (8%)
Query: 2 AKKLPPLSFILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTD 61
A + L + A K+N +HG+ +R ++ S + T S IS K R D
Sbjct: 319 AVTIASLVSVCGDALKVNDGKCLHGWA-VRQQVYSDIIIET------SLISMYAKCKRVD 371
Query: 62 HARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR----LWTTMLNGYI 117
+VF + W +I G ++ ++ +A LF +M D ++L Y
Sbjct: 372 LCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYA 431
Query: 118 ECGMIKEARKL---FDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER---KDVS 171
+++A + S+ + +V+ Y K +E A ++F + E+ KDV
Sbjct: 432 ALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVV 491
Query: 172 -WNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
W ++ GYG +G AL +F M N +++ + + A G +E+ F M
Sbjct: 492 LWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFM 551
Query: 229 QERERDVS---SWTTIVDCL 245
E + ++ +T IVD L
Sbjct: 552 LEHYKTLARSNHYTCIVDLL 571
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 106/236 (44%), Gaps = 47/236 (19%)
Query: 55 CKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLN 114
CKE + A++ FD M ++DMR W+TM+ G+++ G ++ A+ +FDQM +RD W ++L
Sbjct: 282 CKE--SGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLF 339
Query: 115 GYIECGM-IKEARKLF----------------------DGPDAEKSVSTW---------- 141
GY + G + R+LF + E S W
Sbjct: 340 GYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQL 399
Query: 142 -------STMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRR 194
S +++ Y K IE A +F E+ W M+ G +G ++AL LF R
Sbjct: 400 KGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGR 459
Query: 195 MPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER---ERDVSSWTTIVDCL 245
M E N V+ ++ A G +E+ FN M+++ + + + ++VD L
Sbjct: 460 MQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLL 515
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 50/223 (22%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAE---- 103
NS + + G A KVF +MP D+ ++ MI GY K G EA KL+ +M
Sbjct: 170 NSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIE 229
Query: 104 ----------------RDTRL------W---------------TTMLNGYIECGMIKEAR 126
D RL W +L+ Y +C A+
Sbjct: 230 PDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAK 289
Query: 127 KLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIE 186
+ FD +K + +W+TMV G+V++ +E A+ +F +MP+R VSWN ++ GY + G +
Sbjct: 290 RAFDAMK-KKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQ 348
Query: 187 KAL-DLFRRMP-----EPERNVVSWNTIIKALVRCGRIEDAQW 223
+ + +LF M +P+R V+ ++I G + +W
Sbjct: 349 RTVRELFYEMTIVEKVKPDR--VTMVSLISGAANNGELSHGRW 389
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 108/253 (42%), Gaps = 57/253 (22%)
Query: 43 EMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGM-IKEARKLFDQM 101
+M+ N+ + + G + A+ VFDQMP+RD+ W++++ GY K G + R+LF +M
Sbjct: 299 DMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEM 358
Query: 102 A----------------------------------------ERDTRLWTTMLNGYIECGM 121
+ D L + +++ Y +CG+
Sbjct: 359 TIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGI 418
Query: 122 IKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER----KDVSWNIMMG 177
I+ A +F EK V+ W++M+ G ++A +LF M E +V+ ++
Sbjct: 419 IERAFMVFK-TATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLT 477
Query: 178 GYGQNGQIEKALDLFRRM-------PEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
+G +E+ L +F M PE E + +++ L R GR+E+A+ +
Sbjct: 478 ACSHSGLVEEGLHVFNHMKDKFGFDPETEH----YGSLVDLLCRAGRVEEAKDIVQKKMP 533
Query: 231 RERDVSSWTTIVD 243
S W +I+
Sbjct: 534 MRPSQSMWGSILS 546
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 92/183 (50%), Gaps = 17/183 (9%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPD 133
++ L + +++ Y KC A++ FD M ++D R W TM+ G++ G ++ A+ +FD
Sbjct: 268 NLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFD-QM 326
Query: 134 AEKSVSTWSTMVNGYVKINQIEEAER-LFYEM-------PERKDVSWNIMMGGYGQNGQI 185
++ + +W++++ GY K + R LFYEM P+R V+ ++ G NG++
Sbjct: 327 PKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDR--VTMVSLISGAANNGEL 384
Query: 186 EKA---LDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
L R+ +S + +I +CG IE A F E+DV+ WT+++
Sbjct: 385 SHGRWVHGLVIRLQLKGDAFLS-SALIDMYCKCGIIERAFMVFK--TATEKDVALWTSMI 441
Query: 243 DCL 245
L
Sbjct: 442 TGL 444
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 88/160 (55%), Gaps = 9/160 (5%)
Query: 61 DHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG----- 115
D R+VF+ MP +D+ ++T+I GY + GM ++A ++ +M D + + L+
Sbjct: 193 DSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIF 252
Query: 116 --YIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWN 173
Y++ KE + V S++V+ Y K +IE++ER+F + R +SWN
Sbjct: 253 SEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWN 312
Query: 174 IMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIKA 211
++ GY QNG+ +AL LFR+M + + V+++++I A
Sbjct: 313 SLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPA 352
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 104/234 (44%), Gaps = 19/234 (8%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
IHGY + +++++ +S + K R + + +VF ++ RD W++++
Sbjct: 264 IHGYVIRK-------GIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVA 316
Query: 84 GYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYI-ECGMI------KEARKLFDGPDAEK 136
GY++ G EA +LF QM + + I C + K+
Sbjct: 317 GYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGS 376
Query: 137 SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP 196
++ S +V+ Y K I+ A ++F M +VSW ++ G+ +G +A+ LF M
Sbjct: 377 NIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK 436
Query: 197 EP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE---RERDVSSWTTIVDCL 245
+ N V++ ++ A G +++A +FN M + +++ + + D L
Sbjct: 437 RQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLL 490
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
S I CKE D A ++ D M + ++R ++ +INGY K I + +LF +M+ R
Sbjct: 373 SLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLR 432
Query: 105 ----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNGYVKINQIEEA 157
DT + T++ G+ E G + A++LF + K ++ T+ +++G + E+A
Sbjct: 433 GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKA 492
Query: 158 ERLFYEMPERK---DVS-WNIMMGGYGQNGQIEKALDLFRRMP--EPERNVVSWNTIIKA 211
+F ++ + K D+ +NI++ G +++ A DLF +P + V ++N +I
Sbjct: 493 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGG 552
Query: 212 LVRCGRIEDAQWHFNQMQERERDVSSWT 239
L + G + +A+ F +M+E WT
Sbjct: 553 LCKKGPLSEAELLFRKMEEDGHAPDGWT 580
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 113/223 (50%), Gaps = 19/223 (8%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEA 94
+ T + N I C GR D K+ M +R ++ + +I+ ++K G ++EA
Sbjct: 293 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 352
Query: 95 RKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNG 147
+L +M R DT +T++++G+ + + +A ++ D + ++ T++ ++NG
Sbjct: 353 EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILING 412
Query: 148 YVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER--N 201
Y K N+I++ LF +M R V++N ++ G+ + G++ A +LF+ M + N
Sbjct: 413 YCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPN 472
Query: 202 VVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIV 242
+V++ ++ L G E A F ++++ E D+ + I+
Sbjct: 473 IVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIII 515
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
++ I+ LC EGR A ++ D+M E D+ +T++NG G EA L D+M E
Sbjct: 162 STLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVE 221
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKINQIEE 156
+ + +LN + G A +L + + + +S +++G K ++
Sbjct: 222 YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDN 281
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIK 210
A LF EM + +++NI++GG+ G+ + L R M + + NVV+++ +I
Sbjct: 282 AFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLID 341
Query: 211 ALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVD 243
+ V+ G++ +A+ +M R D ++T+++D
Sbjct: 342 SFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID 376
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 15/181 (8%)
Query: 78 WDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGP- 132
+ T+ING G + EA +L D+M E D T++NG G EA L D
Sbjct: 161 FSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV 220
Query: 133 --DAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK----DVSWNIMMGGYGQNGQIE 186
+ + T+ ++N K Q A L +M ER V ++I++ G ++G ++
Sbjct: 221 EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD 280
Query: 187 KALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE--RDVSSWTTIV 242
A +LF M N++++N +I GR +D M +R+ +V +++ ++
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340
Query: 243 D 243
D
Sbjct: 341 D 341
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 25/206 (12%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL-WTTMLNGY 116
G+ HARK+FD MP RD L+ M GY++ G +F +M L M++
Sbjct: 183 GKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLL 242
Query: 117 IECGMIKEARKLFDGPDAEKSVSTW-------------STMVNGYVKINQIEEAERLFYE 163
+ CG + + KSV W + + + YVK + ++ A +F
Sbjct: 243 MACGQLGALKH-------GKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVN 295
Query: 164 MPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDA 221
M R +SW+ ++ GYG +G + + LF M + E N V++ ++ A G +E +
Sbjct: 296 MSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKS 355
Query: 222 QWHFNQMQERE--RDVSSWTTIVDCL 245
+F MQE ++ + ++ DC+
Sbjct: 356 WLYFRLMQEYNIVPELKHYASVADCM 381
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 15/165 (9%)
Query: 65 KVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM-----AERDTRLWTTMLNGYIEC 119
VF MP R++ W+ +I + + G ++ LF +M D +L C
Sbjct: 88 SVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRA---C 144
Query: 120 GMIKEARK------LFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWN 173
+EA+ L S+ S +V YV + ++ A +LF +MP R V +
Sbjct: 145 SASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYT 204
Query: 174 IMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRI 218
M GGY Q G+ L +FR M + S ++ L+ CG++
Sbjct: 205 AMFGGYVQQGEAMLGLAMFREMGYSGFALDS-VVMVSLLMACGQL 248
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 104/240 (43%), Gaps = 45/240 (18%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM------ 101
N I+ K + ARKVFD+M ERD+ W++MI+GY + G ++ +K++ M
Sbjct: 171 NGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDF 230
Query: 102 ----------------------------------AERDTRLWTTMLNGYIECGMIKEARK 127
+ D L ++ Y +CG + AR
Sbjct: 231 KPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARA 290
Query: 128 LFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEK 187
LFD +EK T+ +++GY+ ++EA LF EM +WN M+ G QN E+
Sbjct: 291 LFD-EMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEE 349
Query: 188 ALDLFRRMPE--PERNVVSWNTIIKALVRCGRIEDAQ--WHFNQMQERERDVSSWTTIVD 243
++ FR M N V+ ++++ +L ++ + F + ++ T+I+D
Sbjct: 350 VINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIID 409
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 94/185 (50%), Gaps = 9/185 (4%)
Query: 64 RKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIK 123
+K+ + + D+ L + +I Y KCG + AR LFD+M+E+D+ + +++GY+ G++K
Sbjct: 258 KKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVK 317
Query: 124 EARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM------PERKDVSWNIMMG 177
EA LF ++ +STW+ M++G ++ N EE F EM P +S +
Sbjct: 318 EAMALFSEMES-IGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSL 376
Query: 178 GYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSS 237
Y N + K + F + N+ +II + G + AQ F+ ++R + +
Sbjct: 377 TYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNC--KDRSLIA 434
Query: 238 WTTIV 242
WT I+
Sbjct: 435 WTAII 439
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 107/251 (42%), Gaps = 47/251 (18%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
+ ++ CN+ I K G D+AR +FD+M E+D + +I+GY+ G++KEA LF
Sbjct: 265 IQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFS 324
Query: 100 QMAERDTRLWTTMLNGY----------------IECG-------------MIKEARKLFD 130
+M W M++G I CG + + L
Sbjct: 325 EMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKG 384
Query: 131 GPD---------AEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQ 181
G + A+ ++ +++++ Y K+ + A+R+F +R ++W ++ Y
Sbjct: 385 GKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAV 444
Query: 182 NGQIEKALDLFRRM----PEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER---ERD 234
+G + A LF +M +P+ V+ ++ A G + AQ F+ M + E
Sbjct: 445 HGDSDSACSLFDQMQCLGTKPDD--VTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPG 502
Query: 235 VSSWTTIVDCL 245
V + +V L
Sbjct: 503 VEHYACMVSVL 513
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 41/196 (20%)
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG 131
+ D+ + + MI Y KC I+ ARK+FD+M+ERD W +M++GY + G ++ +K++
Sbjct: 164 DSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKA 223
Query: 132 --------PDAEKSVSTW-------------------------------STMVNGYVKIN 152
P+ +S + + ++ Y K
Sbjct: 224 MLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCG 283
Query: 153 QIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKAL 212
++ A LF EM E+ V++ ++ GY +G +++A+ LF M + +WN +I L
Sbjct: 284 SLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESI--GLSTWNAMISGL 341
Query: 213 VRCGRIEDAQWHFNQM 228
++ E+ F +M
Sbjct: 342 MQNNHHEEVINSFREM 357
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 88/221 (39%), Gaps = 22/221 (9%)
Query: 16 HKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDM 75
H+L H L L R+ FS+ + + IS ++ R A VFD++ R+
Sbjct: 35 HRLPLHVLQ-----LHARIV-VFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNA 88
Query: 76 RLWDTMINGYIKCGMIKEARKLF----------DQMAERDTRLWTTMLNGYIEC------ 119
++ ++ Y M +A LF A D+ + +L C
Sbjct: 89 FSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLG 148
Query: 120 GMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGY 179
+ ++ + V + M+ Y K + IE A ++F EM ER VSWN M+ GY
Sbjct: 149 SLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGY 208
Query: 180 GQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIED 220
Q+G E +++ M + T+I CG+ D
Sbjct: 209 SQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSD 249
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 105/250 (42%), Gaps = 64/250 (25%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF-------DQ 100
S + CK G + KVF MPER+ W TM++GY G ++EA K+F ++
Sbjct: 157 TSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEE 216
Query: 101 MAERD-------TRLWTTMLNGY---IECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVK 150
++ D + L T+ G I C IK F V+ + +V Y K
Sbjct: 217 GSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGF--------VALSNALVTMYSK 268
Query: 151 INQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP------------ 198
+ EA ++F +R ++W+ M+ GY QNG+ +A+ LF RM
Sbjct: 269 CESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGV 328
Query: 199 -------------------------ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERER 233
ER++ + ++ + G + DA+ F+ +Q ER
Sbjct: 329 LNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQ--ER 386
Query: 234 DVSSWTTIVD 243
DV+ WT+++
Sbjct: 387 DVALWTSLIS 396
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 43/217 (19%)
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF-- 129
ER + +++ Y K G + +ARK FD + ERD LWT++++GY++ +EA L+
Sbjct: 354 ERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRR 413
Query: 130 --------DGP---DAEKSVSTWSTM-----VNG--------------------YVKINQ 153
+ P K+ S+ +T+ V+G Y K
Sbjct: 414 MKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGS 473
Query: 154 IEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKA 211
+E+ +F P + VSWN M+ G NGQ ++AL+LF M E + V++ II A
Sbjct: 474 LEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISA 533
Query: 212 LVRCGRIEDAQWHFNQMQER---ERDVSSWTTIVDCL 245
G +E ++FN M ++ + V + +VD L
Sbjct: 534 CSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLL 570
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 41 NTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQ 100
+T ++ N ++ K G+ A +F+ + +D+ W+++I GY + G I + +
Sbjct: 46 STCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQL 105
Query: 101 MAERDTRLWTTMLNGYIECGMIK------------EARKLFDGPDAEKSVSTWSTMVNGY 148
R+ R + N Y G+ K +A L + + +++V Y
Sbjct: 106 F--REMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMY 163
Query: 149 VKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLF 192
K +E+ ++F MPER +W+ M+ GY G++E+A+ +F
Sbjct: 164 CKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVF 207
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 99/259 (38%), Gaps = 81/259 (31%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM------ 101
N+ ++ K + A K+FD +R+ W M+ GY + G EA KLF +M
Sbjct: 260 NALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIK 319
Query: 102 ---------------------------------AERDTRLWTTMLNGYIECGMIKEARKL 128
ER T +++ Y + G + +ARK
Sbjct: 320 PSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKG 379
Query: 129 FDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER--------------------- 167
FD E+ V+ W+++++GYV+ + EEA L+ M
Sbjct: 380 FDCLQ-ERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLAT 438
Query: 168 ----KDVSWNIMMGGYG--------------QNGQIEKALDLFRRMPEPERNVVSWNTII 209
K V + + G+G + G +E +FRR P ++VVSWN +I
Sbjct: 439 LELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRR--TPNKDVVSWNAMI 496
Query: 210 KALVRCGRIEDAQWHFNQM 228
L G+ ++A F +M
Sbjct: 497 SGLSHNGQGDEALELFEEM 515
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 80/151 (52%), Gaps = 11/151 (7%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTT 111
K+G D+AR VFD +PE+ W TMI+G +K G + +LF Q+ E D + +T
Sbjct: 195 KDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILST 254
Query: 112 MLNG-----YIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPE 166
+L+ ++E G A L G E S + +++ YVK ++ A +LF MP
Sbjct: 255 VLSACSILPFLEGGKQIHAHILRYG--LEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPN 312
Query: 167 RKDVSWNIMMGGYGQNGQIEKALDLFRRMPE 197
+ +SW ++ GY QN ++A++LF M +
Sbjct: 313 KNIISWTTLLSGYKQNALHKEAMELFTSMSK 343
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 107/244 (43%), Gaps = 51/244 (20%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM------ 101
N I+ + G +ARKVF++MPER++ W TM++ G+ +E+ +F +
Sbjct: 83 NILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKD 142
Query: 102 ------------------------------------AERDTRLWTTMLNGYIECGMIKEA 125
+RD + T +++ Y++ G I A
Sbjct: 143 SPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYA 202
Query: 126 RKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQI 185
R +FD EKS TW+TM++G VK+ + + +LFY++ E V ++ I
Sbjct: 203 RLVFDAL-PEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSI 261
Query: 186 EKALDLFRRMPEP------ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWT 239
L+ +++ E + N +I + V+CGR+ A FN M +++ SWT
Sbjct: 262 LPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP--NKNIISWT 319
Query: 240 TIVD 243
T++
Sbjct: 320 TLLS 323
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 44/199 (22%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
+ L+T + C+ I + G+ HA + E D L + +I+ Y+KCG + A KL
Sbjct: 250 YILSTVLSACS--ILPFLEGGKQIHAH-ILRYGLEMDASLMNVLIDSYVKCGRVIAAHKL 306
Query: 98 FDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG-------PDAEKSVSTWS-------- 142
F+ M ++ WTT+L+GY + + KEA +LF PD S +
Sbjct: 307 FNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHAL 366
Query: 143 -----------------------TMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGY 179
++++ Y K + + +A ++F V +N M+ GY
Sbjct: 367 GFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGY 426
Query: 180 GQNG---QIEKALDLFRRM 195
+ G ++ +AL++FR M
Sbjct: 427 SRLGTQWELHEALNIFRDM 445
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 99/275 (36%), Gaps = 56/275 (20%)
Query: 16 HKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDM 75
H L +H Y +L + NS I K ARKVFD D+
Sbjct: 364 HALGFGTQVHAYTI-------KANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADV 416
Query: 76 RLWDTMINGYIKCGM---IKEARKLFDQMAERDTR----LWTTMLNG---YIECGMIKEA 125
L++ MI GY + G + EA +F M R R + ++L G+ K+
Sbjct: 417 VLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQI 476
Query: 126 RKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQI 185
L + S +++ Y ++++ +F EM + V WN M GY Q +
Sbjct: 477 HGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSEN 536
Query: 186 EKALDLF------RRMPEP-------------------------------ERNVVSWNTI 208
E+AL+LF R P+ E N N +
Sbjct: 537 EEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNAL 596
Query: 209 IKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVD 243
+ +CG EDA F+ RDV W +++
Sbjct: 597 LDMYAKCGSPEDAHKAFDSAA--SRDVVCWNSVIS 629
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 82/195 (42%), Gaps = 40/195 (20%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF---- 129
D+ +I+ Y C +K++R +FD+M +D +W +M GY++ +EA LF
Sbjct: 488 DIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQ 547
Query: 130 ---DGPD---------AEKSVSTW----------------------STMVNGYVKINQIE 155
+ PD A ++++ + +++ Y K E
Sbjct: 548 LSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPE 607
Query: 156 EAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALV 213
+A + F R V WN ++ Y +G+ +KAL + +M E N +++ ++ A
Sbjct: 608 DAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACS 667
Query: 214 RCGRIEDAQWHFNQM 228
G +ED F M
Sbjct: 668 HAGLVEDGLKQFELM 682
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 82/174 (47%), Gaps = 15/174 (8%)
Query: 79 DTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAE 135
+ +++ Y KCG ++A K FD A RD W ++++ Y G K+A ++ + E
Sbjct: 594 NALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIE 653
Query: 136 KSVSTWSTMVNGYVKINQIEEAERLFYEM------PERKDVSWNIMMGGYGQNGQIEKAL 189
+ T+ +++ +E+ + F M PE + + M+ G+ G++ KA
Sbjct: 654 PNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEH--YVCMVSLLGRAGRLNKAR 711
Query: 190 DLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ--ERERDVSSWTTI 241
+L +MP +V W +++ + G +E A+ H +M +D S+T +
Sbjct: 712 ELIEKMPTKPAAIV-WRSLLSGCAKAGNVELAE-HAAEMAILSDPKDSGSFTML 763
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 70/153 (45%), Gaps = 16/153 (10%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM----AE 103
N+ + K G + A K FD RD+ W+++I+ Y G K+A ++ ++M E
Sbjct: 594 NALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIE 653
Query: 104 RDTRLWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTMVNGYVKINQIEE 156
+ + +L+ G++++ K F+ P+ E V MV+ + ++ +
Sbjct: 654 PNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYV----CMVSLLGRAGRLNK 709
Query: 157 AERLFYEMPER-KDVSWNIMMGGYGQNGQIEKA 188
A L +MP + + W ++ G + G +E A
Sbjct: 710 ARELIEKMPTKPAAIVWRSLLSGCAKAGNVELA 742
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 121/228 (53%), Gaps = 31/228 (13%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEAR 95
+N + NS I KEG+ A K+FD+M +R ++ ++++ING+ + EA+
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 365
Query: 96 KLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS---------TWS 142
++F M + D + T++NG+ +A+K+ DG + + +S T++
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFC------KAKKVVDGMELFRDMSRRGLVGNTVTYT 419
Query: 143 TMVNGYVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP 198
T+++G+ + + + A+ +F +M +++N ++ G +NG++EKA+ +F + +
Sbjct: 420 TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS 479
Query: 199 --ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIV 242
E ++ ++N + + + + G++ED F + + + DV ++ T++
Sbjct: 480 KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMI 527
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 118/225 (52%), Gaps = 23/225 (10%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERD----MRLWDTMINGYIKCGMIKEA 94
S++ + NS I+ C R D A+++F M +D + ++T+ING+ K + +
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDG 399
Query: 95 RKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLF-----DGPDAEKSVSTWSTMV 145
+LF M+ R +T +TT+++G+ + A+ +F DG ++ T++T++
Sbjct: 400 MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG--VHPNIMTYNTLL 457
Query: 146 NGYVKINQIEEAERLFYEMPERK---DV-SWNIMMGGYGQNGQIEKALDLF--RRMPEPE 199
+G K ++E+A +F + + K D+ ++NIM G + G++E DLF + +
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK 517
Query: 200 RNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE--RDVSSWTTIV 242
+V+++NT+I + G E+A F +M+E D ++ T++
Sbjct: 518 PDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 97/210 (46%), Gaps = 40/210 (19%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N I+ LC+ + A + +M + + ++++NG+ I EA L DQM E
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163
Query: 104 RDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEA----ER 159
GY PD T++T+V+G + N+ EA ER
Sbjct: 164 M----------GY--------------QPDT----VTFTTLVHGLFQHNKASEAVALVER 195
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGR 217
+ + + V++ ++ G + G+ + AL+L +M + E +VV ++T+I +L +
Sbjct: 196 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRH 255
Query: 218 IEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
++DA F +M + DV ++++++ CL
Sbjct: 256 VDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 100/233 (42%), Gaps = 43/233 (18%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
K G +A+K+FD+MP+RD MIN Y +CG IKEA +LF + +DT WT M++G
Sbjct: 170 KSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDG 229
Query: 116 YIECGMIKEARKLF--------------------------------------DGPDAEKS 137
+ + +A +LF + E S
Sbjct: 230 LVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELS 289
Query: 138 VSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE 197
+ ++N Y + I EA R+F M ++ +S+N M+ G +G +A++ FR M
Sbjct: 290 NFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVN 349
Query: 198 P--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ---ERERDVSSWTTIVDCL 245
N V+ ++ A G ++ FN M+ E + + IVD L
Sbjct: 350 RGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLL 402
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 111/232 (47%), Gaps = 23/232 (9%)
Query: 21 HPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDT 80
H +IH + L + + + +K C+ ++C+E + F +++ +
Sbjct: 116 HRMIH-----NSVLPDNYVITSVLKACDL---KVCREIHAQVLKLGFGSSRSVGLKMMEI 167
Query: 81 MINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVST 140
Y K G + A+K+FD+M +RD T M+N Y ECG IKEA +LF + +V
Sbjct: 168 ----YGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTV-C 222
Query: 141 WSTMVNGYVKINQIEEAERLFYEMPERKDVSWN-----IMMGGYGQNGQIEKA--LDLFR 193
W+ M++G V+ ++ +A LF EM + ++VS N ++ G +E + F
Sbjct: 223 WTAMIDGLVRNKEMNKALELFREM-QMENVSANEFTAVCVLSACSDLGALELGRWVHSFV 281
Query: 194 RMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
E + N +I RCG I +A+ F M R++DV S+ T++ L
Sbjct: 282 ENQRMELSNFVGNALINMYSRCGDINEARRVFRVM--RDKDVISYNTMISGL 331
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 53 RLCKE-GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTT 111
R+C D+A VF + ++ L+ MI+G++ G + L+ +M
Sbjct: 69 RVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNY 128
Query: 112 MLNGYIECGMIKEARKLFD-----GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPE 166
++ ++ +K R++ G + +SV M+ Y K ++ A+++F EMP+
Sbjct: 129 VITSVLKACDLKVCREIHAQVLKLGFGSSRSVGL--KMMEIYGKSGELVNAKKMFDEMPD 186
Query: 167 RKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFN 226
R V+ +M+ Y + G I++AL+LF+ + ++ V W +I LVR + A F
Sbjct: 187 RDHVAATVMINCYSECGFIKEALELFQDV--KIKDTVCWTAMIDGLVRNKEMNKALELFR 244
Query: 227 QMQERERDVSSWTTI 241
+MQ + +T +
Sbjct: 245 EMQMENVSANEFTAV 259
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 104/207 (50%), Gaps = 18/207 (8%)
Query: 23 LIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMI 82
LIHG + + F N ++K + I K+G HARK+FD++ +RD+ W MI
Sbjct: 33 LIHG-----NSITNGFCSNLQLK--DMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMI 85
Query: 83 NGYIKCGMIKEARKLFDQMAERDTRL----WTTMLNGYIECGMIKEARKL---FDGPDAE 135
+ + +CG +A LF +M D + + ++L + G +KE ++ + +
Sbjct: 86 SRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCA 145
Query: 136 KSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
++ S +++ Y + ++EEA F M ER VSWN M+ GY N + + LF+ M
Sbjct: 146 GNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLM 205
Query: 196 PEPER--NVVSWNTIIKA--LVRCGRI 218
+ + ++ ++++A +V+C I
Sbjct: 206 LTEGKKPDCFTFGSLLRASIVVKCLEI 232
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 53/222 (23%)
Query: 73 RDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIE---C---------G 120
R L +++N Y+KCG + A KL + +RD T ++ G+ + C
Sbjct: 247 RSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKD 306
Query: 121 MIKEARKL----------------------------FDGPDAEKSVSTWSTMVNGYVKIN 152
MI+ K+ V+ +++++ Y K
Sbjct: 307 MIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSG 366
Query: 153 QIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER---NVVSWNTII 209
+IE+A F EM E+ SW ++ GYG++G EKA+DL+ RM E ER N V++ +++
Sbjct: 367 EIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRM-EHERIKPNDVTFLSLL 425
Query: 210 KALVRCGRIE------DAQWHFNQMQERERDVSSWTTIVDCL 245
A G+ E D + + ++ RE +S I+D L
Sbjct: 426 SACSHTGQTELGWKIYDTMINKHGIEAREEHLS---CIIDML 464
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 78/148 (52%), Gaps = 15/148 (10%)
Query: 105 DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM 164
+ +L +++ Y++ G +K ARKLFD +++ V +W+ M++ + + +A LF EM
Sbjct: 46 NLQLKDMLIDLYLKQGDVKHARKLFD-RISKRDVVSWTAMISRFSRCGYHPDALLLFKEM 104
Query: 165 PERKDVSWNIMMGGYGQNGQIEKALDLFRR----MPEPERNVVSWNTIIKALV-----RC 215
R+DV N YG + K L + E+ + N I+++ + RC
Sbjct: 105 -HREDVKANQFT--YGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARC 161
Query: 216 GRIEDAQWHFNQMQERERDVSSWTTIVD 243
G++E+A+ F+ M +ERD+ SW ++D
Sbjct: 162 GKMEEARLQFDSM--KERDLVSWNAMID 187
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 94/180 (52%), Gaps = 27/180 (15%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER-----DTRLWTTMLNGYI 117
AR+VFD+MPE D+ W +++ + K + +EA LF M D + T+L
Sbjct: 217 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTA-- 274
Query: 118 ECGMIKEARKLFDGPDAE---------KSVSTWSTMVNGYVKINQIEEAERLFYEMPERK 168
CG + R+L G + +V S++++ Y K + EA ++F M ++
Sbjct: 275 -CGNL---RRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKN 330
Query: 169 DVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKAL-----VRCGRIEDAQW 223
VSW+ ++GGY QNG+ EKA+++FR M E+++ + T++KA VR G+ Q+
Sbjct: 331 SVSWSALLGGYCQNGEHEKAIEIFREM--EEKDLYCFGTVLKACAGLAAVRLGKEIHGQY 388
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 93/188 (49%), Gaps = 5/188 (2%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
+S + K G AR+VF+ M +++ W ++ GY + G ++A ++F +M E+D
Sbjct: 304 SSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLY 363
Query: 108 LWTTMLN---GYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM 164
+ T+L G + KE + +V S +++ Y K I+ A R++ +M
Sbjct: 364 CFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKM 423
Query: 165 PERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQ 222
R ++WN M+ QNG+ E+A+ F M + + + +S+ I+ A G +++ +
Sbjct: 424 SIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGR 483
Query: 223 WHFNQMQE 230
+F M +
Sbjct: 484 NYFVLMAK 491
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 84/205 (40%), Gaps = 10/205 (4%)
Query: 22 PLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEG-RTDHARKVFDQMPERDMRLWDT 80
IHG F + S L T+ NS +S K G R+VFD +D W +
Sbjct: 76 SFIHGIQFHAHVVKS--GLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTS 133
Query: 81 MINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIE-CGMIKEAR--KLFDGPDAEKS 137
M++GY+ +A ++F +M L+ ++ C + E R + F G
Sbjct: 134 MMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHG 193
Query: 138 VS----TWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFR 193
ST+ Y + +A R+F EMPE + W ++ + +N E+AL LF
Sbjct: 194 FEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFY 253
Query: 194 RMPEPERNVVSWNTIIKALVRCGRI 218
M + V +T L CG +
Sbjct: 254 AMHRGKGLVPDGSTFGTVLTACGNL 278
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 93 EARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSV----STWSTMVNGY 148
+AR++FD+M E D WT +L+ + + + +EA LF K + ST+ T++
Sbjct: 216 DARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTAC 275
Query: 149 VKINQIEEAERLFYEMPERKDVSWNI-----MMGGYGQNGQIEKALDLFRRMPEPERNVV 203
+ ++++ + + ++ + N+ ++ YG+ G + +A +F M + +N V
Sbjct: 276 GNLRRLKQGKEIHGKLIT-NGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSK--KNSV 332
Query: 204 SWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
SW+ ++ + G E A F +M+ E+D+ + T++
Sbjct: 333 SWSALLGGYCQNGEHEKAIEIFREME--EKDLYCFGTVL 369
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 113/213 (53%), Gaps = 25/213 (11%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERD----MRLWDTMINGYIKCGMIKEA 94
S++ ++ +S I+ C R D A+ +F+ M +D + ++T+I G+ K ++E
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 95 RKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLF-----DG--PDAEKSVSTWST 143
+LF +M++R +T + T++ G + G A+K+F DG PD + T+S
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD----IITYSI 470
Query: 144 MVNGYVKINQIEEAERLFYEMPERK---DV-SWNIMMGGYGQNGQIEKALDLF--RRMPE 197
+++G K ++E+A +F + + K D+ ++NIM+ G + G++E DLF +
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 198 PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
+ NV+ + T+I R G E+A F +M+E
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 115/237 (48%), Gaps = 27/237 (11%)
Query: 21 HPLIHGYPFLRTRLASTFSLNTEM--KRC-------NSFISRLCKEGRTDHARKVFDQMP 71
+ LIHG FL + + +L M + C + ++ LCK G D A + +M
Sbjct: 189 NTLIHGL-FLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 247
Query: 72 ----ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIEC----GMIK 123
E D+ ++ T+I+ + +A LF +M + R N I C G
Sbjct: 248 KGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 307
Query: 124 EARKLFDGPDAEK---SVSTWSTMVNGYVKINQIEEAERLFYEMPERK---DV-SWNIMM 176
+A +L K +V T+S +++ +VK ++ EAE+L+ EM +R D+ +++ ++
Sbjct: 308 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Query: 177 GGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIKALVRCGRIEDAQWHFNQMQER 231
G+ + ++++A +F M + NVV++NT+IK + R+E+ F +M +R
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR 424
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 19/215 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFDQM-- 101
N I+ C+ + A V +M E D+ +++NGY I EA L DQM
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 102 --AERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
+ +T + T+++G EA L D + + T+ T+VNG K I+
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 157 AERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIK 210
A L +M + K V + ++ + AL+LF M NVV++N++I+
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 211 ALVRCGRIEDAQWHFNQMQERE--RDVSSWTTIVD 243
L GR DA + M ER+ +V +++ ++D
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 333
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 123/307 (40%), Gaps = 93/307 (30%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER---------- 73
IHGY LR L S S+ CNS I + G+ + +RKVF+ M +R
Sbjct: 111 IHGY-VLRLGLESNVSM------CNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILS 163
Query: 74 -------------------------DMRLWDTMINGYIKCGMIKEA-------------- 94
D+ W+++++GY G+ K+A
Sbjct: 164 SYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKP 223
Query: 95 -----RKLFDQMAE--------------------RDTRLWTTMLNGYIECGMIKEARKLF 129
L +AE D + TT+++ YI+ G + AR +F
Sbjct: 224 STSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVF 283
Query: 130 DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQI 185
D DA K++ W+++V+G +++AE L M + ++WN + GY G+
Sbjct: 284 DMMDA-KNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKP 342
Query: 186 EKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER-----ERDVSSW 238
EKALD+ +M E NVVSW I + G +A F +MQE +S+
Sbjct: 343 EKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTL 402
Query: 239 TTIVDCL 245
I+ CL
Sbjct: 403 LKILGCL 409
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 94/198 (47%), Gaps = 19/198 (9%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYI 117
G T H + + D R+ + Y +C + A KLFD+M +RD W ++ +
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 118 ECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYE----------MPER 167
G ++A +LF + + STM VK+ Q+ + F E +
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTM----VKLLQVCSNKEGFAEGRQIHGYVLRLGLE 121
Query: 168 KDVSW-NIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFN 226
+VS N ++ Y +NG++E + +F M +RN+ SWN+I+ + + G ++DA +
Sbjct: 122 SNVSMCNSLIVMYSRNGKLELSRKVFNSM--KDRNLSSWNSILSSYTKLGYVDDAIGLLD 179
Query: 227 QMQ--ERERDVSSWTTIV 242
+M+ + D+ +W +++
Sbjct: 180 EMEICGLKPDIVTWNSLL 197
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
NS S G+ + A V +M E+ ++ W + +G K G + A K+F +M E
Sbjct: 330 NSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQE 389
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSV----STWSTMVNGYVKINQIE 155
+ +T+L + C + + K G K++ + +V+ Y K ++
Sbjct: 390 EGVGPNAATMSTLLK-ILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQ 448
Query: 156 EAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALV 213
A +F+ + + SWN M+ GY G+ E+ + F M E E + +++ +++
Sbjct: 449 SAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCK 508
Query: 214 RCGRIEDAQWHFNQMQER 231
G +++ +F+ M+ R
Sbjct: 509 NSGLVQEGWKYFDLMRSR 526
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 112/217 (51%), Gaps = 19/217 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ ++ LCK G HA ++ D M + D+ ++++I+G K G +KEA ++ DQM
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMIT 358
Query: 104 RD----TRLWTTMLNGYIECGMIKEARKL---FDGPDAEKSVSTWSTMVNGYVKINQIEE 156
RD T + T+++ + ++EA +L V T+++++ G
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV 418
Query: 157 AERLFYEM----PERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIK 210
A LF EM E + ++N+++ G++++AL++ ++M R+V+++NT+I
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478
Query: 211 ALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
+ + +A+ F++M+ R+ ++ T++D L
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGL 515
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 100/201 (49%), Gaps = 21/201 (10%)
Query: 48 NSFISRLCKEGRTDHARKVFDQM----PERDMRLWDTMINGYIKCGMIKEARKLFDQM-- 101
NS I LC A ++F++M E D ++ +I+ G + EA + QM
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463
Query: 102 --AERDTRLWTTMLNGYIECGMIKEARKLFDGPDA---EKSVSTWSTMVNGYVKINQIEE 156
R + T+++G+ + +EA ++FD + ++ T++T+++G K ++E+
Sbjct: 464 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 157 AERLFYEM------PERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTI 208
A +L +M P++ ++N ++ + + G I+KA D+ + M E ++V++ T+
Sbjct: 524 AAQLMDQMIMEGQKPDK--YTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTL 581
Query: 209 IKALVRCGRIEDAQWHFNQMQ 229
I L + GR+E A +Q
Sbjct: 582 ISGLCKAGRVEVASKLLRSIQ 602
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 103/209 (49%), Gaps = 28/209 (13%)
Query: 36 STFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMI 91
S + + ++ N I LC+ + A + + MP D + + T++ GYI+ G +
Sbjct: 181 SVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDL 240
Query: 92 KEARKLFDQMAERDTRLWT-----TMLNGYIECGMIKEARKLF------DG--PDAEKSV 138
A ++ +QM E W+ +++G+ + G +++A DG PD
Sbjct: 241 DGALRIREQMVEFGCS-WSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQ---- 295
Query: 139 STWSTMVNGYVKINQIEEAERLFYEMPER---KDV-SWNIMMGGYGQNGQIEKALDLFRR 194
T++T+VNG K ++ A + M + DV ++N ++ G + G++++A+++ +
Sbjct: 296 YTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQ 355
Query: 195 MP--EPERNVVSWNTIIKALVRCGRIEDA 221
M + N V++NT+I L + ++E+A
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEA 384
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ I K D ARKVFD+MPERD+ W +I Y + G ++ A +LF+ + +D
Sbjct: 188 NTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMV 247
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKS-VSTWSTMVNGYVKI-----------NQIE 155
WT M+ G+ + +EA + FD EKS + V GY+ ++
Sbjct: 248 AWTAMVTGFAQNAKPQEALEYFD--RMEKSGIRADEVTVAGYISACAQLGASKYADRAVQ 305
Query: 156 EAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRC 215
A++ Y P V + ++ Y + G +E+A+++F M +NV +++++I L
Sbjct: 306 IAQKSGYS-PSDHVVIGSALIDMYSKCGNVEEAVNVFMSM--NNKNVFTYSSMILGLATH 362
Query: 216 GRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
GR ++A F+ M + + T V L
Sbjct: 363 GRAQEALHLFHYMVTQTEIKPNTVTFVGAL 392
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 115/239 (48%), Gaps = 21/239 (8%)
Query: 18 LNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEG--RTDHARKVFDQMPERDM 75
LN IHG+ LR L + + T++ R L K G +AR+V + + R+
Sbjct: 62 LNQIKQIHGH-VLRKGLDQSCYILTKLIR------TLTKLGVPMDPYARRVIEPVQFRNP 114
Query: 76 RLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIE-CGMIKE---ARKLFDG 131
LW +I GY G EA ++ M + + + + ++ CG +K+ R+
Sbjct: 115 FLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQ 174
Query: 132 PDAEKS---VSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKA 188
+ V +TM++ YVK I+ A ++F EMPER +SW ++ Y + G +E A
Sbjct: 175 TFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECA 234
Query: 189 LDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE---RERDVSSWTTIVDC 244
+LF + P +++V+W ++ + + ++A +F++M++ R +V+ I C
Sbjct: 235 AELFESL--PTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISAC 291
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 109/219 (49%), Gaps = 23/219 (10%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ + K R A KV ++M + ++++I+ Y + GM+ EA +L +QMAE
Sbjct: 318 NALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE 377
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
+ T+ +TT+L+G+ G ++ A +F+ + ++ T++ + Y + E
Sbjct: 378 KGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTE 437
Query: 157 AERLFYEMP----ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE----PERNVVSWNTI 208
++F E+ V+WN ++ +GQNG + +F+ M PER ++NT+
Sbjct: 438 MMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE--TFNTL 495
Query: 209 IKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
I A RCG E A + +M + D+S++ T++ L
Sbjct: 496 ISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAAL 534
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 108/220 (49%), Gaps = 20/220 (9%)
Query: 26 GYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTM 81
Y R L FS++T N ++ C RT A +V +M ER ++ ++TM
Sbjct: 180 AYELFRA-LRGRFSVDTVTY--NVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTM 236
Query: 82 INGYIKCGMIKEARKLFDQMAERDTRL----WTTMLNGYIECGMIKEARKLFDGPDAE-- 135
+ G+ + G I+ A + F +M +RD + +TT+++G+ G IK AR +FD E
Sbjct: 237 LKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGV 296
Query: 136 -KSVSTWSTMVNGYVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALD 190
SV+T++ M+ K + +E A +F EM R ++N+++ G G+ + +
Sbjct: 297 LPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEE 356
Query: 191 LFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
L +RM E N ++N +I+ C +E A F +M
Sbjct: 357 LMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 396
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 21/162 (12%)
Query: 91 IKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAE---KSVSTWSTMVNG 147
I + K F +AER Y G +A KLF + +++++T+++
Sbjct: 122 IGPSPKTFAIVAER-----------YASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDV 170
Query: 148 YVKINQIEEAERLFYEMPER---KDVSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNV 202
K ++E+A LF + R V++N+++ G+ + KAL++ + M E N+
Sbjct: 171 LCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNL 230
Query: 203 VSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIV 242
++NT++K R G+I A F +M++R E DV ++TT+V
Sbjct: 231 TTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVV 272
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 105/200 (52%), Gaps = 17/200 (8%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEA 94
S+N ++ + I K+G D A++++ +M + + ++++ING G + +A
Sbjct: 241 SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDA 300
Query: 95 RKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDAE---KSVSTWSTMVNG 147
+K FD MA + + + T+++G+ + M+ E KLF E + T++T+++G
Sbjct: 301 KKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHG 360
Query: 148 YVKINQIEEAERLFYEMPERKD----VSWNIMMGGYGQNGQIEKALDLFRRMPEPER--N 201
Y ++ ++ A +F M R+ ++ I++ G NG+IE AL F M E E+
Sbjct: 361 YCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIG 420
Query: 202 VVSWNTIIKALVRCGRIEDA 221
+V++N +I L + ++E A
Sbjct: 421 IVAYNIMIHGLCKADKVEKA 440
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 29/206 (14%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMA- 102
NS I+ LC GR A+K FD M + ++ ++T+I+G+ K M+ E KLF +M+
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 103 ---ERDTRLWTTMLNGYIECGMIKEARKLF-------DGPDAEKSVSTWSTMVNGYVKIN 152
D + T+++GY + G ++ A +F PD + T +++G
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD----IITHCILLHGLCVNG 400
Query: 153 QIEEAERLFYEMPERKD----VSWNIMMGGYGQNGQIEKALDLFRRMP----EPERNVVS 204
+IE A F +M E + V++NIM+ G + ++EKA +LF R+P +P+ +
Sbjct: 401 EIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDAR--T 458
Query: 205 WNTIIKALVRCGRIEDAQWHFNQMQE 230
+ +I L + G +A +M+E
Sbjct: 459 YTIMILGLCKNGPRREADELIRRMKE 484
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 122/277 (44%), Gaps = 66/277 (23%)
Query: 23 LIHGYPFLRTRLASTFSLNTEMKRC---------NSFISRLCKEGRTDHARKVFDQMPER 73
L+HG+ L R+ FSL M + N+ I LCK G + A ++ ++M ++
Sbjct: 147 LLHGFC-LVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKK 205
Query: 74 ----DMRLWDTMING-----------------------------------YIKCGMIKEA 94
D+ ++T++ G ++K G + EA
Sbjct: 206 GLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEA 265
Query: 95 RKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNG 147
++L+ +M + + + +++NG G + +A+K FD +V T++T+++G
Sbjct: 266 QELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISG 325
Query: 148 YVKINQIEEAERLFYEMP----ERKDVSWNIMMGGYGQNGQIEKALDLF----RRMPEPE 199
+ K ++E +LF M ++N ++ GY Q G++ ALD+F R P+
Sbjct: 326 FCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385
Query: 200 RNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVS 236
+++ ++ L G IE A F+ M+E E+ +
Sbjct: 386 --IITHCILLHGLCVNGEIESALVKFDDMRESEKYIG 420
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 91/177 (51%), Gaps = 12/177 (6%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMI 122
AR++FD+M ER++ W M++GY + G I A LF+ M ERD W +L + G+
Sbjct: 181 ARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLF 240
Query: 123 KEARKLF----DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGG 178
EA LF + P + T +++ + ++ A+ + + R+D+S ++ +
Sbjct: 241 LEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGI-HAFAYRRDLSSDVFVSN 299
Query: 179 -----YGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
YG+ G +E+A +F+ ++++ +WN++I GR E+A F +M +
Sbjct: 300 SLVDLYGKCGNLEEASSVFKM--ASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMK 354
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Query: 110 TTMLNGYIE-CGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK 168
T +L+ Y I AR+LFD +E++V +W+ M++GY + I A LF +MPER
Sbjct: 165 TALLHSYASSVSHITLARQLFD-EMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERD 223
Query: 169 DVSWNIMMGGYGQNGQIEKALDLFRRM---PEPERNVVSWNTIIKALVRCGRIEDAQ--W 223
SWN ++ QNG +A+ LFRRM P N V+ ++ A + G ++ A+
Sbjct: 224 VPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIH 283
Query: 224 HFNQMQERERDVSSWTTIVD 243
F ++ DV ++VD
Sbjct: 284 AFAYRRDLSSDVFVSNSLVD 303
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 109/254 (42%), Gaps = 21/254 (8%)
Query: 13 MHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCN-----SFISRLCKEGRTDHARKVF 67
H + + L+H Y + + L EM N + +S + G +A +F
Sbjct: 157 FHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALF 216
Query: 68 DQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT-----RLWTTMLNGYIECGMI 122
+ MPERD+ W+ ++ + G+ EA LF +M + +L+ + G +
Sbjct: 217 EDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTL 276
Query: 123 KEARKLFDGP---DAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGY 179
+ A+ + D V +++V+ Y K +EEA +F ++ +WN M+ +
Sbjct: 277 QLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCF 336
Query: 180 GQNGQIEKALDLFRRMPEPERN-----VVSWNTIIKALVRCGRIEDAQWHFNQMQER--- 231
+G+ E+A+ +F M + N +++ ++ A G + + +F+ M R
Sbjct: 337 ALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGI 396
Query: 232 ERDVSSWTTIVDCL 245
E + + ++D L
Sbjct: 397 EPRIEHYGCLIDLL 410
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 105/214 (49%), Gaps = 19/214 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAE 103
+S I+ LCK GR A + +M + + + +I+ Y K G + + ++ M +
Sbjct: 87 SSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQ 146
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
+ +++++ G + EA K+ D +V T+ST+ NG+ K +++++
Sbjct: 147 MSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDD 206
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIK 210
+L +MP+R VS N ++ GY Q G+I+ AL +F M N+ S+N ++
Sbjct: 207 GIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLA 266
Query: 211 ALVRCGRIEDAQWHFNQMQE--RERDVSSWTTIV 242
L G +E A F MQ+ + D+ ++T ++
Sbjct: 267 GLFANGEVEKALSRFEHMQKTRNDLDIITYTIMI 300
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 95/207 (45%), Gaps = 40/207 (19%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
+S I LC R D A K+ D M + ++ + T+ NG+ K + + KL D M +
Sbjct: 157 SSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQ 216
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
R +T T++ GY + G I A +F GY+ N +
Sbjct: 217 RGVAANTVSCNTLIKGYFQAGKIDLALGVF-----------------GYMTSNGL----- 254
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGR 217
+P + S+NI++ G NG++EKAL F M + + +++++ +I + +
Sbjct: 255 ----IPNIR--SYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACM 308
Query: 218 IEDAQWHFNQMQER--ERDVSSWTTIV 242
+++A F +++ + E D ++T ++
Sbjct: 309 VKEAYDLFYKLKFKRVEPDFKAYTIMI 335
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 93/187 (49%), Gaps = 15/187 (8%)
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQM----AERDTRLWTTMLNGYIECGMIK---E 124
E D+ +++NG+ IK+A + QM +RD + T +++ + ++ E
Sbjct: 10 EPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALE 69
Query: 125 ARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK----DVSWNIMMGGYG 180
K +V T+S+++ G K ++ +AER +EM +K ++++ ++ Y
Sbjct: 70 VLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYA 129
Query: 181 QNGQIEKALDLFRRMPE--PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVS 236
+ G++ K +++ M + + NV +++++I L R+++A + M + +V
Sbjct: 130 KRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVV 189
Query: 237 SWTTIVD 243
+++T+ +
Sbjct: 190 TYSTLAN 196
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIE 118
ARKVFD++P+ D+ WD ++NGY++CG+ E ++F +M R D TT L +
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQ 230
Query: 119 CGMIKEARKLFDGPD----AEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNI 174
G + + + + + E V + +V+ Y K IE A +F ++ R SW
Sbjct: 231 VGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAA 290
Query: 175 MMGGYGQNGQIEKA---LDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER 231
++GGY G +KA LD R + + V ++ A G +E+ + M+ R
Sbjct: 291 LIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEAR 350
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM----AERDTRLWTTMLNGYIE 118
ARKVFD++P+ D+ WD ++NGY++CG+ E ++F +M E D TT L +
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQ 230
Query: 119 CGMIKEARKLFDGPD----AEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNI 174
G + + + + + E V + +V+ Y K IE A +F ++ R SW
Sbjct: 231 VGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAA 290
Query: 175 MMGGYGQNGQIEKALDLFRRMPEPER---NVVSWNTIIKALVRCGRIEDAQWHFNQMQER 231
++GGY G +KA+ R+ + + V ++ A G +E+ + M+ R
Sbjct: 291 LIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEAR 350
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 104/199 (52%), Gaps = 18/199 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N +S LCK GR A+ +F +M +R D ++ T+I+G+I+ G EARK+F E
Sbjct: 454 NMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVE 513
Query: 104 RDTRL----WTTMLNGYIECGMIKEARKLFDGPDAEKSVS---TWSTMVNGYVKINQIEE 156
+ ++ M+ G+ GM+ EA + + E V T+ST+++GYVK +
Sbjct: 514 KGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMAT 573
Query: 157 AERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMP--EPERNVVSWNTIIK 210
A ++F M + K V++ ++ G+ G + A + F+ M + NVV++ T+I+
Sbjct: 574 AIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIR 633
Query: 211 ALVR-CGRIEDAQWHFNQM 228
+L + +E A +++ M
Sbjct: 634 SLAKESSTLEKAVYYWELM 652
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 29/258 (11%)
Query: 16 HKLNTHPLIHGYPFLRTR-LASTFSLNTEMKRCNS-------FISRLCKEGRTDHAR--- 64
+ L+ PLI Y + +AS L + C I L G D A
Sbjct: 379 NNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMK 438
Query: 65 -KVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIEC 119
K+ D+ D +++ +++G K G A+ LF +M +R D ++ T+++G+I
Sbjct: 439 VKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRS 498
Query: 120 GMIKEARKLFDGPDAEKSVST----WSTMVNGYVKINQIEEAERLFYEMPERKDV----S 171
G EARK+F EK V + M+ G+ + ++EA M E V +
Sbjct: 499 GDFDEARKVF-SLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFT 557
Query: 172 WNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
++ ++ GY + + A+ +FR M + + NVV++ ++I G + A+ F +MQ
Sbjct: 558 YSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQ 617
Query: 230 ERER--DVSSWTTIVDCL 245
R+ +V ++TT++ L
Sbjct: 618 LRDLVPNVVTYTTLIRSL 635
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 105/219 (47%), Gaps = 27/219 (12%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDM----RLWDTMINGYIKCGMIKEARKLFDQMAE 103
N I+RLCKEG+ + A D+ ++ + + +I Y K A KL QMAE
Sbjct: 349 NILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAE 408
Query: 104 R----DTRLWTTMLNGYIECGMIKEA----RKLFD---GPDAEKSVSTWSTMVNGYVKIN 152
R D + +++G + G + +A KL D PDA + ++ +++G K
Sbjct: 409 RGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDA----AIYNMLMSGLCKTG 464
Query: 153 QIEEAERLFYEMPERKDVS----WNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWN 206
+ A+ LF EM +R + + ++ G+ ++G ++A +F E + +VV N
Sbjct: 465 RFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHN 524
Query: 207 TIIKALVRCGRIEDAQWHFNQMQERER--DVSSWTTIVD 243
+IK R G +++A N+M E D +++TI+D
Sbjct: 525 AMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIID 563
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFD--- 99
CNS +S L K R ARKV+D+M +R D ++ G G ++ RKL +
Sbjct: 173 CNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRW 232
Query: 100 -QMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAE---KSVSTWSTMVNGYVKINQIE 155
+ + + T++ GY + G I+ A +F + ++ T+ TM+NG+ K
Sbjct: 233 GKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFV 292
Query: 156 EAERLFYEMPER--KDVSW---NIMMGGYGQNGQIEKALDL-FRRMPEPERNVVSWNTII 209
++RL E+ ER + W NI+ Y +++ A + + + + +V ++N +I
Sbjct: 293 ASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILI 352
Query: 210 KALVRCGRIEDAQWHFNQMQER 231
L + G+ E A ++ ++
Sbjct: 353 NRLCKEGKKEVAVGFLDEASKK 374
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 81/171 (47%), Gaps = 19/171 (11%)
Query: 61 DHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGY 116
D+ +++D +P D+ +++++ +K + +ARK++D+M +R D ++ G
Sbjct: 158 DYVVELYDSVP--DVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGM 215
Query: 117 IECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYE------MPER 167
G ++ RKL + G ++ ++T++ GY K+ IE A +F E MP
Sbjct: 216 CNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTL 275
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSW--NTIIKALVRCG 216
+ ++ M+ G+ + G + L + E V W N II A R G
Sbjct: 276 E--TFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHG 324
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 114/265 (43%), Gaps = 50/265 (18%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
+HG+ + F + TE N+ I K A KVFD+M ERD+ W+++++
Sbjct: 131 VHGH---LCKFGPRFHVVTE----NALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLS 183
Query: 84 GYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG-------PD--- 133
GY + G +K+A+ LF M ++ WT M++GY G EA F PD
Sbjct: 184 GYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEIS 243
Query: 134 -----------------------AE-----KSVSTWSTMVNGYVKINQIEEAERLFYEMP 165
AE K + ++ Y K I +A +LF +M
Sbjct: 244 LISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQME 303
Query: 166 ERKDVSWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIKALVRCGRIEDAQW 223
+ +SW+ M+ GY +G A++ F M + + N +++ ++ A G ++
Sbjct: 304 GKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLR 363
Query: 224 HFNQMQER---ERDVSSWTTIVDCL 245
+F+ M++ E + + ++D L
Sbjct: 364 YFDMMRQDYQIEPKIEHYGCLIDVL 388
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 105/223 (47%), Gaps = 27/223 (12%)
Query: 17 KLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMR 76
K+N +IHG S+F + + C+ K D+A ++F+Q+ ++
Sbjct: 28 KINASIIIHGLS------QSSFMVTKMVDFCD-------KIEDMDYATRLFNQVSNPNVF 74
Query: 77 LWDTMINGY----IKCGMIKEARKLFDQMAERDTRL-WTTMLNGYIECGMIKEARKLFD- 130
L++++I Y + C +I+ ++L + E R + M G +++
Sbjct: 75 LYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGH 134
Query: 131 ----GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIE 186
GP V T + +++ Y+K + + +A ++F EM ER +SWN ++ GY + GQ++
Sbjct: 135 LCKFGPRFH--VVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMK 192
Query: 187 KALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
KA LF M ++ +VSW +I G +A F +MQ
Sbjct: 193 KAKGLFHLM--LDKTIVSWTAMISGYTGIGCYVEAMDFFREMQ 233
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 85/175 (48%), Gaps = 12/175 (6%)
Query: 79 DTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEK-- 136
+ +I Y KCG+I +A +LF QM +D W+TM++GY G A + F+ K
Sbjct: 280 NALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVK 339
Query: 137 -SVSTWSTMVNGYVKINQIEEAERLFYEM-----PERKDVSWNIMMGGYGQNGQIEKALD 190
+ T+ +++ + +E R F M E K + ++ + G++E+A++
Sbjct: 340 PNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVE 399
Query: 191 LFRRMP-EPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE-RDVSSWTTIVD 243
+ + MP +P+ + W +++ + G ++ A + + E E D+ ++ + +
Sbjct: 400 ITKTMPMKPDSKI--WGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLAN 452
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 68/162 (41%), Gaps = 9/162 (5%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
CN+ I K G A ++F QM +D+ W TMI+GY G A + F++M
Sbjct: 279 CNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKV 338
Query: 107 R----LWTTMLNGYIECGMIKEARKLFD----GPDAEKSVSTWSTMVNGYVKINQIEEAE 158
+ + +L+ GM +E + FD E + + +++ + ++E A
Sbjct: 339 KPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAV 398
Query: 159 RLFYEMPERKDVS-WNIMMGGYGQNGQIEKALDLFRRMPEPE 199
+ MP + D W ++ G ++ AL + E E
Sbjct: 399 EITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELE 440
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 20/209 (9%)
Query: 26 GYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTM 81
G L+ L+ F LN+ + C+ +S LCK GR D A +F+QM D+ + +
Sbjct: 346 GLVLLKDMLSRGFELNSIIP-CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIV 404
Query: 82 INGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEK- 136
I+G K G A L+D+M ++ ++R +L G + GM+ EAR L D +
Sbjct: 405 IHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE 464
Query: 137 --SVSTWSTMVNGYVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKA-- 188
+ ++ +++GY K IEEA LF + E ++N ++ GY + I +A
Sbjct: 465 TLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARK 524
Query: 189 -LDLFRRMPEPERNVVSWNTIIKALVRCG 216
LD+ ++ +VVS+ T++ A CG
Sbjct: 525 ILDVI-KLYGLAPSVVSYTTLMDAYANCG 552
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 97/204 (47%), Gaps = 11/204 (5%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF 98
N ++ S +S GR + A K+FD++P+R + W + +GY G +EA LF
Sbjct: 141 GFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLF 200
Query: 99 DQMAER----DTRLWTTMLNGYIECGMIKEAR---KLFDGPDAEKSVSTWSTMVNGYVKI 151
+M E D+ +L+ + G + K + + +K+ +T+VN Y K
Sbjct: 201 KKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKC 260
Query: 152 NQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKA 211
++E+A +F M E+ V+W+ M+ GY N ++ ++LF +M + + +I+
Sbjct: 261 GKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQF-SIVGF 319
Query: 212 LVRC---GRIEDAQWHFNQMQERE 232
L C G ++ +W + + E
Sbjct: 320 LSSCASLGALDLGEWGISLIDRHE 343
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 104/222 (46%), Gaps = 26/222 (11%)
Query: 37 TFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARK 96
TF +N +KR F +T ++ +F ++ L++++ING++ + E
Sbjct: 45 TFLVNLLLKRTLFF-------RQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLD 97
Query: 97 LFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---------SVSTWSTMVNG 147
LF + + L ++ +RKL G D V+ +++++
Sbjct: 98 LFLSIRKHGLYLHGFTFPLVLKACTRASSRKL--GIDLHSLVVKCGFNHDVAAMTSLLSI 155
Query: 148 YVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE----PERNVV 203
Y ++ +A +LF E+P+R V+W + GY +G+ +A+DLF++M E P+ +
Sbjct: 156 YSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFI 215
Query: 204 SWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSW--TTIVD 243
++ A V G ++ +W M+E E +S+ TT+V+
Sbjct: 216 V--QVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVN 255
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 22/220 (10%)
Query: 43 EMKRCNSFI-----SRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
EM++ NSF+ + K G+ + AR VFD M E+D+ W TMI GY KE +L
Sbjct: 242 EMQK-NSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIEL 300
Query: 98 FDQMAERDTRLWTTMLNGYI-ECGMIKE------ARKLFDGPDAEKSVSTWSTMVNGYVK 150
F QM + + + + G++ C + L D + ++ + +++ Y K
Sbjct: 301 FLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAK 360
Query: 151 INQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE----PERNVVSWN 206
+ +F EM E+ V N + G +NG ++ + +F + + P+ + ++
Sbjct: 361 CGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGS--TFL 418
Query: 207 TIIKALVRCGRIEDAQWHFNQMQ---ERERDVSSWTTIVD 243
++ V G I+D FN + +R V + +VD
Sbjct: 419 GLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVD 458
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 70/146 (47%), Gaps = 9/146 (6%)
Query: 42 TEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM 101
T + N+ I K G +VF +M E+D+ + + I+G K G +K + +F Q
Sbjct: 346 TNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQT 405
Query: 102 AER----DTRLWTTMLNGYIECGMIKEARKLFDGPDA----EKSVSTWSTMVNGYVKINQ 153
+ D + +L G + G+I++ + F+ +++V + MV+ + +
Sbjct: 406 EKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGM 465
Query: 154 IEEAERLFYEMPERKD-VSWNIMMGG 178
+++A RL +MP R + + W ++ G
Sbjct: 466 LDDAYRLICDMPMRPNAIVWGALLSG 491
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 104/241 (43%), Gaps = 22/241 (9%)
Query: 21 HPLIHGY---PFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRL 77
H + G P+ ++++ L T S I K G AR +FD MPER +
Sbjct: 231 HGFLQGLGFDPYFQSKVGFNVILAT------SLIDMYAKCGDLRTARYLFDGMPERTLVS 284
Query: 78 WDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAE-- 135
W+++I GY + G +EA +F M + I MI+ +L A
Sbjct: 285 WNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVS 344
Query: 136 -----KSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALD 190
K + +VN Y K E A++ F ++ ++ ++W +++ G +G +AL
Sbjct: 345 KTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALS 404
Query: 191 LFRRMPEPERNVVSWNTIIKALVRC---GRIEDAQWHFNQMQE---RERDVSSWTTIVDC 244
+F+RM E T + L C G +E+ Q +F +M++ E V + +VD
Sbjct: 405 IFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDI 464
Query: 245 L 245
L
Sbjct: 465 L 465
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 100/207 (48%), Gaps = 28/207 (13%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
+HG+ + + F +N + C + C G ++ +VF+ +P+ ++ W ++I+
Sbjct: 129 VHGFV-----VKTGFEVNMYVSTCLLHMYMCC--GEVNYGLRVFEDIPQWNVVAWGSLIS 181
Query: 84 GYIKCGMIKEARKLFDQMAERDTRL-WTTMLNGYIECGMIKE--ARKLFDG--------P 132
G++ +A + F +M + T M++ + CG K+ K F G P
Sbjct: 182 GFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDP 241
Query: 133 DAEKSVS----TWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKA 188
+ V +++++ Y K + A LF MPER VSWN ++ GY QNG E+A
Sbjct: 242 YFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEA 301
Query: 189 LDLFRRMPE----PERNVVSWNTIIKA 211
L +F M + P++ V++ ++I+A
Sbjct: 302 LCMFLDMLDLGIAPDK--VTFLSVIRA 326
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 10/161 (6%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER---- 104
+ ++ K G + A+K F+ + ++D W +I G G EA +F +M E+
Sbjct: 357 ALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNAT 416
Query: 105 -DTRLWTTMLNGYIECGMIKEARKLF----DGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
D + +L G+++E ++ F D E +V + MV+ + + EEAER
Sbjct: 417 PDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAER 476
Query: 160 LFYEMPERKDVS-WNIMMGGYGQNGQIEKALDLFRRMPEPE 199
L MP + +V+ W ++ G + +E + + EPE
Sbjct: 477 LVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPE 517
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 101/244 (41%), Gaps = 25/244 (10%)
Query: 1 MAKKLPPLSFILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEG-R 59
M K P+ L + L +HG + + + L+ + C + C E
Sbjct: 2 MKKHYKPILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTT-----CPETMN 56
Query: 60 TDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNG 115
+AR VF+ + + +W++MI GY +A + +M + D + +L
Sbjct: 57 LSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKA 116
Query: 116 Y-----IECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV 170
I+ G + G + VST +++ Y+ ++ R+F ++P+ V
Sbjct: 117 CSGLRDIQFGSCVHGFVVKTGFEVNMYVST--CLLHMYMCCGEVNYGLRVFEDIPQWNVV 174
Query: 171 SWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWN--TIIKALVRCGRIED---AQWHF 225
+W ++ G+ N + A++ FR M + N V N ++ LV CGR +D +W
Sbjct: 175 AWGSLISGFVNNNRFSDAIEAFREM---QSNGVKANETIMVDLLVACGRCKDIVTGKWFH 231
Query: 226 NQMQ 229
+Q
Sbjct: 232 GFLQ 235
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 109/210 (51%), Gaps = 13/210 (6%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEA-----RKLFDQMA 102
+S + K G +ARK+FD+MP+R++ W M+ GY + G +EA LF+ +A
Sbjct: 155 SSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLA 214
Query: 103 ERDTRLWTTMLNGYIECGMIKEARK---LFDGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
D ++++++ +++ R+ L + S S++V+ Y K E A +
Sbjct: 215 VNDYS-FSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQ 273
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGR 217
+F E+P + WN M+ Y Q+ +K ++LF+RM + N +++ ++ A G
Sbjct: 274 VFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGL 333
Query: 218 IEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
+++ +++F+QM+E E + ++VD L
Sbjct: 334 VDEGRYYFDQMKESRIEPTDKHYASLVDML 363
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 131 GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALD 190
G DA+ V S++V+ Y K +I A ++F EMP+R V+W+ MM GY Q G+ E+AL
Sbjct: 146 GYDAD--VFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALW 203
Query: 191 LFR 193
LF+
Sbjct: 204 LFK 206
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 20/209 (9%)
Query: 26 GYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTM 81
G L+ L+ F LN+ + C+ +S LCK GR D A +F+QM D+ + +
Sbjct: 346 GLVLLKDMLSRGFELNSIIP-CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIV 404
Query: 82 INGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEK- 136
I+G K G A L+D+M ++ ++R +L G + GM+ EAR L D +
Sbjct: 405 IHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE 464
Query: 137 --SVSTWSTMVNGYVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKA-- 188
+ ++ +++GY K IEEA LF + E ++N ++ GY + I +A
Sbjct: 465 TLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARK 524
Query: 189 -LDLFRRMPEPERNVVSWNTIIKALVRCG 216
LD+ ++ +VVS+ T++ A CG
Sbjct: 525 ILDVI-KLYGLAPSVVSYTTLMDAYANCG 552
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 107/246 (43%), Gaps = 54/246 (21%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL 108
+ + K G+ + AR VF+ M + ++ +MI+GY+ G +++A ++F+ +D +
Sbjct: 180 ALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVV 239
Query: 109 WTTMLNGYIECGMIKEARKLFD------GPDAEKSVSTWSTMVNG--------------- 147
+ M+ G+ G + A++ D ++ST+++++
Sbjct: 240 YNAMVEGFSRSG--ETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHA 297
Query: 148 --------------------YVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEK 187
Y K I +A R+F +M E+ SW M+ GYG+NG E+
Sbjct: 298 QIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEE 357
Query: 188 ALDLFRRMPE--PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVS------SWT 239
AL+LF RM E E N V++ + A G ++ F MQ RD S +
Sbjct: 358 ALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQ---RDYSMKPKMEHYA 414
Query: 240 TIVDCL 245
IVD +
Sbjct: 415 CIVDLM 420
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 108/222 (48%), Gaps = 20/222 (9%)
Query: 35 ASTFSLNTEMKRCNSFIS------RLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKC 88
A ++L+ +K NS S LC R HAR + + E D L +++ Y+K
Sbjct: 133 ADGYTLSMVLKASNSRGSTMILPRSLC---RLVHARIIKCDV-ELDDVLITALVDTYVKS 188
Query: 89 GMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGY 148
G ++ AR +F+ M + + T+M++GY+ G +++A ++F+ K + ++ MV G+
Sbjct: 189 GKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKV-KDIVVYNAMVEGF 247
Query: 149 VKINQIEEAERLFYEMPERKDVSWNI-----MMGGYGQNGQIEKALDLFRRMPEPE--RN 201
+ + + Y +R NI ++G E + ++ + +
Sbjct: 248 SRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTH 307
Query: 202 VVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVD 243
+ ++++ +CG I DA+ F+QMQ E++V SWT+++D
Sbjct: 308 IKMGSSLLDMYAKCGGINDARRVFDQMQ--EKNVFSWTSMID 347
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 85/171 (49%), Gaps = 15/171 (8%)
Query: 75 MRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDA 134
+++ ++++ Y KCG I +AR++FDQM E++ WT+M++GY + G +EA +LF
Sbjct: 308 IKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKE 367
Query: 135 EKSVSTWSTMVNGYVKINQ---IEEAERLFYEMPERKDVSWNIMMGGY-------GQNGQ 184
+ + T + + +++ +F M ++D S M Y G+ G
Sbjct: 368 FRIEPNYVTFLGALSACSHSGLVDKGYEIFESM--QRDYSMKPKMEHYACIVDLMGRAGD 425
Query: 185 IEKALDLFRRMPE-PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERD 234
+ KA + R MPE P+ ++ W ++ + G +E A +++ + D
Sbjct: 426 LNKAFEFARAMPERPDSDI--WAALLSSCNLHGNVELASIAASELFKLNAD 474
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 42 TEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM 101
T +K +S + K G + AR+VFDQM E+++ W +MI+GY K G +EA +LF +M
Sbjct: 306 THIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRM 365
Query: 102 AE-RDTRLWTTMLNGYIEC---GMIKEARKLFDGPDAEKSVST----WSTMVNGYVKINQ 153
E R + T L C G++ + ++F+ + S+ ++ +V+ +
Sbjct: 366 KEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGD 425
Query: 154 IEEAERLFYEMPERKDVS-WNIMMGGYGQNGQIEKA 188
+ +A MPER D W ++ +G +E A
Sbjct: 426 LNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELA 461
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 94/202 (46%), Gaps = 21/202 (10%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
K G+ HA + + D+ + ++ ++KCG + AR++FD++ + + M++G
Sbjct: 51 KAGKKIHA-DIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISG 109
Query: 116 YIECGMIKE-----ARKLFDGPDAE---------KSVSTWSTMVNGYVKINQIEEAERLF 161
Y++ G++KE R + G A+ S S STM+ + R+
Sbjct: 110 YLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVH--ARII 167
Query: 162 YEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDA 221
E DV ++ Y ++G++E A +F M + NVV ++I + G +EDA
Sbjct: 168 KCDVELDDVLITALVDTYVKSGKLESARTVFETM--KDENVVCCTSMISGYMNQGFVEDA 225
Query: 222 QWHFNQMQERERDVSSWTTIVD 243
+ FN + +D+ + +V+
Sbjct: 226 EEIFN--TTKVKDIVVYNAMVE 245
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 113/216 (52%), Gaps = 19/216 (8%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
+ I KEG AR ++ +M R ++ ++++ING+ G + +A+ +FD M +
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318
Query: 105 ----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS---TWSTMVNGYVKINQIEEA 157
D + T++ G+ + +++ KLF + V T++T+++GY + ++ A
Sbjct: 319 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVA 378
Query: 158 ERLFYEMPE----RKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNV--VSWNTIIKA 211
+++F M + V++NI++ NG+IEKAL + + + E +V +++N II+
Sbjct: 379 QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 438
Query: 212 LVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
L R ++++A F + + + D ++ T++ L
Sbjct: 439 LCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 474
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 113/244 (46%), Gaps = 52/244 (21%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMING------------------- 84
N+ I+ LCK ++A +VF M ++ +R ++T+I+G
Sbjct: 188 NTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVK 247
Query: 85 ----------------YIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIECGMIKE 124
++K G + EAR L+ +M R + + +++NG+ G + +
Sbjct: 248 RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 307
Query: 125 ARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV----SWNIMMG 177
A+ +FD V T++T++ G+ K ++E+ +LF EM + V ++N ++
Sbjct: 308 AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIH 367
Query: 178 GYGQNGQIEKALDLFRRMPE--PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDV 235
GY Q G++ A +F RM + ++V++N ++ L G+IE A +Q+ E DV
Sbjct: 368 GYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDV 427
Query: 236 SSWT 239
T
Sbjct: 428 DIIT 431
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 84/167 (50%), Gaps = 19/167 (11%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ I+ CK R + K+F +M + D ++T+I+GY + G + A+K+F++M +
Sbjct: 328 NTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD 387
Query: 104 ----RDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKS-----VSTWSTMVNGYVKINQI 154
D + +L+ G I++A + + D +KS + T++ ++ G + +++
Sbjct: 388 CGVSPDIVTYNILLDCLCNNGKIEKALVMVE--DLQKSEMDVDIITYNIIIQGLCRTDKL 445
Query: 155 EEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPE 197
+EA LF + + +++ M+ G + G +A L RRM E
Sbjct: 446 KEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKE 492
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 89/187 (47%), Gaps = 15/187 (8%)
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR----LWTTMLNGYIECGMIKEARK 127
D+ + +I+ + +C + A L +M + R ++LNG+ + +EA
Sbjct: 111 SHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVS 170
Query: 128 LFDGPDA---EKSVSTWSTMVNGYVKINQIEEAERLFYEMPE---RKD-VSWNIMMGGYG 180
L D D +V ++T++NG K + A +FY M + R D V++N ++ G
Sbjct: 171 LVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLS 230
Query: 181 QNGQIEKALDLFRRMP--EPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERER--DVS 236
+G+ A L R M + + NV+ + +I V+ G + +A+ + +M R +V
Sbjct: 231 NSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVF 290
Query: 237 SWTTIVD 243
++ ++++
Sbjct: 291 TYNSLIN 297
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERD----MRLWDTMINGYIKCGMIKEARKLFDQMAER 104
S I C G D + +FD++ ER ++T+I G+ K G +KEA ++F+ M ER
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311
Query: 105 DTR----LWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEA 157
R +T +++G G KEA +L + D E + T++ ++N K + +A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371
Query: 158 ERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPE----PERNVVSWNTII 209
+ M +R+ ++++NI++GG G +++A L M + + +V+S+N +I
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431
Query: 210 KALVRCGRIEDAQWHFNQMQER 231
L + R+ A ++ + E+
Sbjct: 432 HGLCKENRLHQALDIYDLLVEK 453
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 103/198 (52%), Gaps = 17/198 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ I LCKE R A ++D + E+ D + ++N +K G + +A +L+ Q+++
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487
Query: 104 ----RDTRLWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIEE 156
R++ +T M++G+ + GM+ A+ L + + SV ++ +++ K +++
Sbjct: 488 SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQ 547
Query: 157 AERLFYEMPERKD----VSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIK 210
A RLF EM + VS+NIM+ G + G I+ A L M ++ +++ +I
Sbjct: 548 AWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
Query: 211 ALVRCGRIEDAQWHFNQM 228
++ G +++A F++M
Sbjct: 608 RFLKLGYLDEAISFFDKM 625
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 9/183 (4%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
K G +A ++FD +P+++ W+ + G K G + A LFD+M ERD W TM++G
Sbjct: 51 KSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISG 110
Query: 116 YIECGMIKEARKLF------DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKD 169
+ CG + ++F + E + S +++V QI + +
Sbjct: 111 LVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQI-HGNAICSGVSRYNL 169
Query: 170 VSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
V WN +M Y + G + AL +F M +R+VVSWN +I + G E A F M+
Sbjct: 170 VVWNSVMDMYRRLGVFDYALSVFLTM--EDRDVVSWNCLILSCSDSGNKEVALDQFWLMR 227
Query: 230 ERE 232
E E
Sbjct: 228 EME 230
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 7/158 (4%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAE---R 104
N + L K G ++A +FD+MPERD+ W+TMI+G + CG + ++F M R
Sbjct: 74 NVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIR 133
Query: 105 DTRLWTTMLNGYIEC---GMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLF 161
T ++L + C G + G + ++ W+++++ Y ++ + A +F
Sbjct: 134 PTEFTFSILASLVTCVRHGEQIHGNAICSGV-SRYNLVVWNSVMDMYRRLGVFDYALSVF 192
Query: 162 YEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE 199
M +R VSWN ++ +G E ALD F M E E
Sbjct: 193 LTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREME 230
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 148 YVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNT 207
Y K + A +LF ++P++ ++WN+ + G +NG + ALDLF M PER+VVSWNT
Sbjct: 49 YFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEM--PERDVVSWNT 106
Query: 208 IIKALVRCGRIEDAQWHFNQMQERE 232
+I LV CG E F MQ E
Sbjct: 107 MISGLVSCGFHEYGIRVFFDMQRWE 131
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 103/251 (41%), Gaps = 52/251 (20%)
Query: 42 TEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMR--LWDTMINGYIKCGMIKEARKLFD 99
TE + IS CK G ARKVF++ P+ ++ +I+GY + +A +F
Sbjct: 86 TEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFR 145
Query: 100 QMAERDTRLWTTMLNGYIECGMIKE----ARKLF-----DGPDAEKSVSTWSTMVNGYVK 150
+M E + + + G + + E R L G D+E V+ ++ + Y+K
Sbjct: 146 RMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSE--VAVLNSFITMYMK 203
Query: 151 INQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM------PEP------ 198
+E RLF EMP + ++WN ++ GY QNG L+L+ +M P+P
Sbjct: 204 CGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSV 263
Query: 199 -------------------------ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERER 233
NV N I RCG + A+ F+ M +
Sbjct: 264 LSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP--VK 321
Query: 234 DVSSWTTIVDC 244
+ SWT ++ C
Sbjct: 322 SLVSWTAMIGC 332
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 7/163 (4%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
L++E+ NSFI+ K G + R++FD+MP + + W+ +I+GY + G+ + +L++
Sbjct: 187 LDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYE 246
Query: 100 QMAER----DTRLWTTMLNGYIECGMIK---EARKLFDGPDAEKSVSTWSTMVNGYVKIN 152
QM D ++L+ G K E KL + +V + ++ Y +
Sbjct: 247 QMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCG 306
Query: 153 QIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
+ +A +F MP + VSW M+G YG +G E L LF M
Sbjct: 307 NLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDM 349
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 83/195 (42%), Gaps = 10/195 (5%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ IS + G AR VFD MP + + W MI Y GM + LFD M +R R
Sbjct: 296 NASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIR 355
Query: 108 ----LWTTMLNGYIECGMIKEARKLFDGPDAEKSVST----WSTMVNGYVKINQIEEAER 159
++ +L+ G+ + +LF E + +S +V+ + +++EA
Sbjct: 356 PDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAME 415
Query: 160 LFYEMPERKD-VSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRI 218
MP D W ++G + ++ A F ++ E E N + + ++ + +
Sbjct: 416 FIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKN 475
Query: 219 EDAQWHFNQMQERER 233
++ W M RER
Sbjct: 476 QEGIWRIRVMM-RER 489
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 105/222 (47%), Gaps = 24/222 (10%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER-----DMRLWDTMINGYIKCGMIKEARKLFDQM- 101
NS +S L K GRT A +FD+M D ++T+ING+ K M+ EA ++F M
Sbjct: 177 NSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDME 236
Query: 102 ---AERDTRLWTTMLNGYIECGMIKEARKLFDG-----PDAEKSVSTWSTMVNGYVKINQ 153
D + T+++G G +K A + G D +V +++T+V GY +
Sbjct: 237 LYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQE 296
Query: 154 IEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLF----RRMPEPERNVVSW 205
I+EA +F++M R V++N ++ G + + ++ D+ + ++
Sbjct: 297 IDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTF 356
Query: 206 NTIIKALVRCGRIEDAQWHFNQM--QERERDVSSWTTIVDCL 245
N +IKA G ++ A F +M + D +S++ ++ L
Sbjct: 357 NILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTL 398
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 96/190 (50%), Gaps = 22/190 (11%)
Query: 76 RLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDG 131
R ++++I Y G+ +E+ KLF M + + ++L+ ++ G A LFD
Sbjct: 139 RYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDE 198
Query: 132 PDAEKSVS----TWSTMVNGYVKINQIEEAERLFYEM------PERKDVSWNIMMGGYGQ 181
V+ T++T++NG+ K + ++EA R+F +M P+ V++N ++ G +
Sbjct: 199 MRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDV--VTYNTIIDGLCR 256
Query: 182 NGQIEKALD----LFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDV 235
G+++ A + + ++ + NVVS+ T+++ I++A F+ M R + +
Sbjct: 257 AGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNA 316
Query: 236 SSWTTIVDCL 245
++ T++ L
Sbjct: 317 VTYNTLIKGL 326
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 37 TFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIK 92
T+ + + N+ I+ CK D A ++F M D+ ++T+I+G + G +K
Sbjct: 202 TYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVK 261
Query: 93 EARKLFDQMAERDTRL------WTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWST 143
A + M ++ T + +TT++ GY I EA +F + + T++T
Sbjct: 262 IAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNT 321
Query: 144 MVNGYVKINQIEEAERLF------YEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP- 196
++ G + ++ +E + + + ++NI++ + G ++ A+ +F+ M
Sbjct: 322 LIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLN 381
Query: 197 -EPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE 232
+ + S++ +I+ L + A+ FN++ E+E
Sbjct: 382 MKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKE 418
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 89/178 (50%), Gaps = 11/178 (6%)
Query: 61 DHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL--WTTMLNGYIE 118
D+ARK+F+ +R++ +W T+I+G+ KC EA LF QM R++ L T+ +
Sbjct: 263 DNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQML-RESILPNQCTLAAILVS 321
Query: 119 CGMIKEAR--KLFDG----PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSW 172
C + R K G E +++ ++ Y + I+ A +F MPER +SW
Sbjct: 322 CSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISW 381
Query: 173 NIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIKALVRCGRIEDAQWHFNQM 228
+ M+ +G NG E+ALD F +M N V++ +++ A G +++ F M
Sbjct: 382 SSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESM 439
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 113/268 (42%), Gaps = 58/268 (21%)
Query: 23 LIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMI 82
LIHG LA L+ + S + + G + A+KVFD++P R+ LW ++
Sbjct: 130 LIHG-------LAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLM 182
Query: 83 NGYIKCGMIKEARKLFDQMAERDTRL---WTTMLNGYIECGMIKEAR--KLFDGPDAEKS 137
GY+K E +LF M RDT L T++ CG + + K G +S
Sbjct: 183 KGYLKYSKDPEVFRLFCLM--RDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRS 240
Query: 138 VSTWS-----TMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLF 192
S ++++ YVK ++ A +LF +R V W ++ G+ + + +A DLF
Sbjct: 241 FIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLF 300
Query: 193 RRMPEP-------------------------------------ERNVVSWNTIIKALVRC 215
R+M E + V++ + I RC
Sbjct: 301 RQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARC 360
Query: 216 GRIEDAQWHFNQMQERERDVSSWTTIVD 243
G I+ A+ F+ M ER+V SW+++++
Sbjct: 361 GNIQMARTVFDMMP--ERNVISWSSMIN 386
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 22/193 (11%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCN--SFISRLCKEGRTDHARKVFDQMPERDMRLWDTM 81
+HGY +R + EM N SFI + G AR VFD MPER++ W +M
Sbjct: 334 VHGY-MIRNGI--------EMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSM 384
Query: 82 INGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKS 137
IN + G+ +EA F +M + ++ + ++L+ G +KE K F+ +
Sbjct: 385 INAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYG 444
Query: 138 V----STWSTMVNGYVKINQIEEAERLFYEMPERKDVS-WNIMMGGYGQNGQIEKALDLF 192
V ++ MV+ + +I EA+ MP + S W ++ + +++ A ++
Sbjct: 445 VVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIA 504
Query: 193 RRMP--EPERNVV 203
++ EPE++ V
Sbjct: 505 EKLLSMEPEKSSV 517
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 101/220 (45%), Gaps = 29/220 (13%)
Query: 12 LMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMP 71
L H +++ +IHG+ L S+ + N++I + R D A F+++P
Sbjct: 20 LNHTQQVHAKVIIHGFED-EVVLGSSLT--------NAYI----QSNRLDFATSSFNRIP 66
Query: 72 --ERDMRLWDTMINGYIKCGMI--KEARKLFDQMAERDTRLWTTMLN---------GYIE 118
+R+ W+T+++GY K + L+++M + + L G +E
Sbjct: 67 CWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLE 126
Query: 119 CGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGG 178
G++ + +G D + V+ ++V Y ++ +E A+++F E+P R V W ++M G
Sbjct: 127 NGILIHGLAMKNGLDKDDYVA--PSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKG 184
Query: 179 YGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRI 218
Y + + + LF M + + + T+I + CG +
Sbjct: 185 YLKYSKDPEVFRLFCLMRDTGLALDAL-TLICLVKACGNV 223
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 102/191 (53%), Gaps = 22/191 (11%)
Query: 51 ISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAER-- 104
I LCKEG+ + VF+ M + ++ ++ +I+GY K G +++A +L +M +
Sbjct: 334 IGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGF 393
Query: 105 --DTRLWTTMLNGYIECGMIKEARKLF-----DGPDAEKSVSTWSTMVNGYVKINQIEEA 157
D ++ ++NG + G ++EA F DG +S++++G K +++EA
Sbjct: 394 KPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMF--YSSLIDGLGKAGRVDEA 451
Query: 158 ERLFYEMPE----RKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE---RNVVSWNTIIK 210
ERLF EM E R +N ++ + ++ ++++A+ LF+RM E E + V ++ ++
Sbjct: 452 ERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLS 511
Query: 211 ALVRCGRIEDA 221
+ + R E+A
Sbjct: 512 GMFKEHRNEEA 522
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 114/238 (47%), Gaps = 54/238 (22%)
Query: 60 TDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARK------------------- 96
D A +VF+ M + D+ ++TMI GY K G ++A +
Sbjct: 238 VDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMT 297
Query: 97 ----------------LFDQMAERDTRL----WTTMLNGYIECGMIKEARKLFDG---PD 133
L+ +M E+ ++ ++ ++ G + G + E +F+
Sbjct: 298 MIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKG 357
Query: 134 AEKSVSTWSTMVNGYVKINQIEEAERLFYEMPE---RKD-VSWNIMMGGYGQNGQIEKAL 189
++ +V+ ++ +++GY K +E+A RL + M + + D V++++++ G +NG++E+AL
Sbjct: 358 SKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEAL 417
Query: 190 DLFR--RMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVD 243
D F R N + ++++I L + GR+++A+ F +M E+ RD + ++D
Sbjct: 418 DYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALID 475
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 124/248 (50%), Gaps = 29/248 (11%)
Query: 23 LIHGYPFLRTRLASTFSLNTEM--KRC-------NSFISRLCKEGRTDHARKVFDQMP-- 71
LIHG FL + + +L +M + C + ++ LCK G D A + ++M
Sbjct: 194 LIHGL-FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAA 252
Query: 72 --ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIEC----GMIKEA 125
+ ++ +++T+I+ K ++ A LF +M + R N I C G +A
Sbjct: 253 RIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDA 312
Query: 126 RKLFDGPDAEK---SVSTWSTMVNGYVKINQIEEAERLFYEMPERK----DVSWNIMMGG 178
+L +K +V T++ +++ + K ++ EAE+L EM +R +++N+++ G
Sbjct: 313 SRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLING 372
Query: 179 YGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIKALVRCGRIEDAQWHFNQMQERER--D 234
+ + ++++A +F+ M + N+ ++NT+I +C R+ED F +M +R +
Sbjct: 373 FCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGN 432
Query: 235 VSSWTTIV 242
++TTI+
Sbjct: 433 TVTYTTII 440
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 105/198 (53%), Gaps = 16/198 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERD----MRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N I+ C R D A+++F M +D ++ ++T+ING+ KC +++ +LF +M++
Sbjct: 367 NLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ 426
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNGYVKINQIEE 156
R +T +TT++ G+ + G A+ +F + + + T+S +++G +++
Sbjct: 427 RGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDT 486
Query: 157 AERLFYEMP----ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKAL 212
A +F + E +N M+ G + G++ +A DLF + + +VV++NT+I L
Sbjct: 487 ALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL-SIKPDVVTYNTMISGL 545
Query: 213 VRCGRIEDAQWHFNQMQE 230
+++A F +M+E
Sbjct: 546 CSKRLLQEADDLFRKMKE 563
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 19/226 (8%)
Query: 37 TFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIK 92
T ++ ++ + FI+ C+ + A V +M E D+ +++NGY I
Sbjct: 111 TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 93 EARKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGP---DAEKSVSTWSTMV 145
+A L DQM E DT +TT+++G EA L D + + T+ T+V
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 146 NGYVKINQIEEAERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPEP--E 199
NG K I+ A L +M + V +N ++ + +E A+DLF M
Sbjct: 231 NGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIR 290
Query: 200 RNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE--RDVSSWTTIVD 243
NVV++N++I L GR DA + M E++ +V ++ ++D
Sbjct: 291 PNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALID 336
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 103/198 (52%), Gaps = 15/198 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAE 103
NS IS + G+ + A ++F+++ ++ W+++I+G+ + G + EA K F++M
Sbjct: 302 NSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLS 361
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
+ T++L+ + +K +++ AE+ + +++++ Y+K
Sbjct: 362 VVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSW 421
Query: 157 AERLF--YEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKAL 212
A R+F +E + V WN+M+ GYG++G+ E A+++F + E E ++ ++ ++ A
Sbjct: 422 ARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSAC 481
Query: 213 VRCGRIEDAQWHFNQMQE 230
CG +E F MQE
Sbjct: 482 SHCGNVEKGSQIFRLMQE 499
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 86/190 (45%), Gaps = 24/190 (12%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
+ +S K + A KV D+MPER + + ++G ++ G ++A ++F D R
Sbjct: 70 TALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFG-----DAR 124
Query: 108 LWTTMLN-----------GYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEE 156
+ + +N G IE GM + G + E V T ++V+ Y + +
Sbjct: 125 VSGSGMNSVTVASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGT--SLVSMYSRCGEWVL 182
Query: 157 AERLFYEMPERKDVSWNIMMGGYGQNGQ---IEKALDLFRRMPEPERNVVSWNTIIKALV 213
A R+F ++P + V++N + G +NG + +L R+ E N V T + A+
Sbjct: 183 AARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDV---TFVNAIT 239
Query: 214 RCGRIEDAQW 223
C + + Q+
Sbjct: 240 ACASLLNLQY 249
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 95/206 (46%), Gaps = 11/206 (5%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE 93
LA E+ S +S + G A ++F+++P + + ++ I+G ++ G++
Sbjct: 154 LAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNL 213
Query: 94 ARKLFDQMAERDTRLW--TTMLNGYIECGMI------KEARKLFDGPDAEKSVSTWSTMV 145
+F+ M + + T +N C + ++ L + + + ++
Sbjct: 214 VPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALI 273
Query: 146 NGYVKINQIEEAERLFYEMPERKD-VSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNV 202
+ Y K + A +F E+ + ++ +SWN ++ G NGQ E A++LF ++ + +
Sbjct: 274 DMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDS 333
Query: 203 VSWNTIIKALVRCGRIEDAQWHFNQM 228
+WN++I + G++ +A F +M
Sbjct: 334 ATWNSLISGFSQLGKVIEAFKFFERM 359
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 99/246 (40%), Gaps = 50/246 (20%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWD--TMINGYIKCGMI---KEARKLFDQMA 102
N+FIS L + G + VF+ M + + T +N C + + R+L +
Sbjct: 199 NAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVM 258
Query: 103 ERD----TRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAE 158
+++ T + T +++ Y +C K A +F +++ +W+++++G + Q E A
Sbjct: 259 KKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAV 318
Query: 159 RLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRM------------------- 195
LF ++ +WN ++ G+ Q G++ +A F RM
Sbjct: 319 ELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSAC 378
Query: 196 ------------------PEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSS 237
ER++ ++I ++CG A+ F++ + + +D
Sbjct: 379 SDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVF 438
Query: 238 WTTIVD 243
W ++
Sbjct: 439 WNVMIS 444
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 101/195 (51%), Gaps = 18/195 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N + KEG+ A +++ +M R ++ ++T+++GY + EA + D M
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS---TWSTMVNGYVKINQIEE 156
D +T+++ GY + + K+F V+ T+S +V G+ + +I+
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL 421
Query: 157 AERLFYEMPERK---DV-SWNIMMGGYGQNGQIEKALDLFRRMPEPERN--VVSWNTIIK 210
AE LF EM DV ++ I++ G NG++EKAL++F + + + + +V + TII+
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 211 ALVRCGRIEDAQWHF 225
+ + G++EDA W+
Sbjct: 482 GMCKGGKVEDA-WNL 495
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 100/215 (46%), Gaps = 19/215 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N I+ C+ +T A V ++ E D ++T+I G G + EA L D+M E
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKINQIEE 156
D + +++NG G A L + + + V T+ST+++ + I+
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIK 210
A LF EM + V++N ++ G + G+ L + M E NV+++N ++
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 211 ALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVD 243
V+ G++++A + +M R ++ ++ T++D
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 341
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 106/215 (49%), Gaps = 10/215 (4%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
L+ + C + + K G A K+FD+MP RD+ W+ +I G + EA +L+
Sbjct: 140 LSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYK 199
Query: 100 QM-AERDTRLWTTMLNGYIEC---GMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIE 155
+M E R T++ C G +KE +F G + + + + ++ Y K ++
Sbjct: 200 RMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVS-NAAIDMYSKCGFVD 258
Query: 156 EAERLFYEMPERKD-VSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKAL 212
+A ++F + +K V+WN M+ G+ +G+ +AL++F ++ + + + VS+ + A
Sbjct: 259 KAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTAC 318
Query: 213 VRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
G +E FN M + ER++ + +VD L
Sbjct: 319 RHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLL 353
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 105/200 (52%), Gaps = 17/200 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
S I CKE + D A + D M + ++R ++ +INGY K +I + +LF +M+
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNGYVKINQIEE 156
R DT + T++ G+ E G ++ A++LF + + + ++ +++G + E+
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475
Query: 157 AERLFYEMPERK---DVS-WNIMMGGYGQNGQIEKALDLFRRMP--EPERNVVSWNTIIK 210
A +F ++ + K D+ +NI++ G +++ A DLF +P + +V ++N +I
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIG 535
Query: 211 ALVRCGRIEDAQWHFNQMQE 230
L + G + +A F +M+E
Sbjct: 536 GLCKKGSLSEADLLFRKMEE 555
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 111/246 (45%), Gaps = 54/246 (21%)
Query: 54 LCKEGRTDHARKVFDQMPERDMRL----WDTMINGYIKCGMIKEARKLFDQMA----ERD 105
+CK G+T A ++ +M ER ++L + +I+G K G + A LF++M + D
Sbjct: 222 MCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 281
Query: 106 TRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNGYVKINQIEEAERLFY 162
++TT++ G+ G + KL K V +S +++ +VK ++ EAE L
Sbjct: 282 IIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHK 341
Query: 163 EMPERK----------------------------DV-----------SWNIMMGGYGQNG 183
EM +R D+ ++NI++ GY +
Sbjct: 342 EMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKAN 401
Query: 184 QIEKALDLFRRMP--EPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERER--DVSSWT 239
I+ L+LFR+M + V++NT+I+ G++E A+ F +M R D+ S+
Sbjct: 402 LIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYK 461
Query: 240 TIVDCL 245
++D L
Sbjct: 462 ILLDGL 467
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 87/189 (46%), Gaps = 15/189 (7%)
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR----LWTTMLNGYIECGMIKEARK 127
E D + T+ING G + EA +L D+M E + ++NG G + +A
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 128 LFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK----DVSWNIMMGGYG 180
L D + + T+ ++ K Q A L +M ERK V ++I++ G
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 181 QNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE--RDVS 236
++G ++ A +LF M + +++ + T+I+ GR +D M +R+ DV
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 237 SWTTIVDCL 245
+++ ++DC
Sbjct: 319 AFSALIDCF 327
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 124/251 (49%), Gaps = 29/251 (11%)
Query: 23 LIHGYPFLRTRLASTFSLNTEM--KRC-------NSFISRLCKEGRTDHARKVFDQMP-- 71
LIHG FL + + +L M + C ++ LCK G TD A + ++M
Sbjct: 196 LIHGL-FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAA 254
Query: 72 --ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIEC----GMIKEA 125
E D+ +++T+I+ K + +A LF +M + R + I C G +A
Sbjct: 255 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 314
Query: 126 RKLFDGPDAEK---SVSTWSTMVNGYVKINQIEEAERLFYEMPERK---DV-SWNIMMGG 178
+L +K ++ T++ +++ +VK + EAE+L+ +M +R D+ ++N ++ G
Sbjct: 315 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNG 374
Query: 179 YGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE--RD 234
+ + +++KA +F M + +VV++NT+IK + R+ED F +M R D
Sbjct: 375 FCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 434
Query: 235 VSSWTTIVDCL 245
++TT++ L
Sbjct: 435 TVTYTTLIQGL 445
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 118/252 (46%), Gaps = 54/252 (21%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
+S IS LC GR A ++ M E+ ++ ++ +I+ ++K G EA KL+D M +
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
R D + +++NG+ + +A+++F+ D V T++T++ G+ K ++E+
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418
Query: 157 AERLFYEMPERKDV---------------------------------------SWNIMMG 177
LF EM R V +++I++
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478
Query: 178 GYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIKALVRCGRIEDAQWHFNQMQER--ER 233
G NG++EKAL++F M + E ++ + T+I+ + + G+++D F + + +
Sbjct: 479 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 538
Query: 234 DVSSWTTIVDCL 245
+V ++ T++ L
Sbjct: 539 NVVTYNTMISGL 550
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 111/218 (50%), Gaps = 21/218 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ I LCK D A +F +M + +R + ++I+ G +A +L M E
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDGP---DAEKSVSTWSTMVNGYVKINQIEE 156
+ + + +++ +++ G EA KL+D + + T++++VNG+ +++++
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 157 AERLFYEMPERKD-----VSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTII 209
A+++F E KD V++N ++ G+ ++ ++E +LFR M + V++ T+I
Sbjct: 384 AKQMF-EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 210 KALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
+ L G ++AQ F QM D+ +++ ++D L
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 111/214 (51%), Gaps = 27/214 (12%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERD----MRLWDTMINGYIKCGMIKEA 94
S++ ++ NS ++ C R D A+++F+ M +D + ++T+I G+ K +++
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 95 RKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLF-----DG--PDAEKSVSTWST 143
+LF +M+ R DT +TT++ G G A+K+F DG PD + T+S
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD----IMTYSI 475
Query: 144 MVNGYVKINQIEEAERLFYEMPERKDVSWNI-----MMGGYGQNGQIEKALDLF--RRMP 196
+++G ++E+A +F M ++ ++ +I M+ G + G+++ DLF +
Sbjct: 476 LLDGLCNNGKLEKALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 534
Query: 197 EPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
+ NVV++NT+I L +++A +M+E
Sbjct: 535 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N I+ C+ + A + +M E + +++NGY I +A L DQM E
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
DT +TT+++G EA L D + ++ T+ +VNG K +
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243
Query: 157 AERLFYEMP----ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIK 210
A L +M E V +N ++ + ++ AL+LF+ M NVV+++++I
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 211 ALVRCGRIEDAQWHFNQMQERE 232
L GR DA + M E++
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKK 325
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 81/162 (50%), Gaps = 15/162 (9%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
+ I L +G D+A+KVF QM D+ + +++G G +++A ++FD M +
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 499
Query: 105 DTRL----WTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIEEA 157
+ +L +TTM+ G + G + + LF + +V T++TM++G ++EA
Sbjct: 500 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 559
Query: 158 ERLFYEMPERKDV----SWNIMMGGYGQNGQIEKALDLFRRM 195
L +M E + ++N ++ + ++G + +L R M
Sbjct: 560 YALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 112/218 (51%), Gaps = 21/218 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQM-- 101
N+ + +CK G+ D A ++ QMP + ++ + T+I+G+ K G EA LF +M
Sbjct: 378 NTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY 437
Query: 102 --AERDTRLWTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKINQIEE 156
D + T+L+ Y + G +EA + +K V T++ ++ GY K + +E
Sbjct: 438 LGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDE 497
Query: 157 AERLFYEMPERKDV-----SWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTII 209
+++F EM +R+ V +++ ++ GY + G ++A+++FR +VV ++ +I
Sbjct: 498 VKKVFTEM-KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI 556
Query: 210 KALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
AL + G + A ++M + +V ++ +I+D
Sbjct: 557 DALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 116/227 (51%), Gaps = 22/227 (9%)
Query: 38 FSLNTEMKRCNSFISRLCKEG-RTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIK 92
+ L + N+ I K G K FD+M + D +++++ + G+ +
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 93 EARKLFDQMA----ERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMV 145
AR LFD+M E+D + T+L+ + G + A ++ ++ +V ++ST++
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 146 NGYVKINQIEEAERLFYEM----PERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--E 199
+G+ K + +EA LF EM VS+N ++ Y + G+ E+ALD+ R M +
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 200 RNVVSWNTIIKALVRCGRIEDAQWHFNQMQERER---DVSSWTTIVD 243
++VV++N ++ + G+ ++ + F +M+ RE ++ +++T++D
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMK-REHVLPNLLTYSTLID 522
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 78/158 (49%), Gaps = 15/158 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ +S K GR++ A + +M ++D+ ++ ++ GY K G E +K+F +M
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKL---FDGPDAEKSVSTWSTMVNGYVKINQIEE 156
+ ++T+++GY + G+ KEA ++ F V +S +++ K +
Sbjct: 508 EHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGS 567
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALD 190
A L EM + V++N ++ +G++ ++++ D
Sbjct: 568 AVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE 93
L TF+ + +K C S + RL G + H ++V D + +++N Y K G++
Sbjct: 43 LPDTFTFPSLLKACAS-LQRL-SFGLSIH-QQVLVNGFSSDFYISSSLVNLYAKFGLLAH 99
Query: 94 ARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD---------GP------------ 132
ARK+F++M ERD WT M+ Y G++ EA L + GP
Sbjct: 100 ARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLE 159
Query: 133 --------------DAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGG 178
+ ++ ++M+N Y K + + +A+ LF +M +R VSWN M+ G
Sbjct: 160 ITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISG 219
Query: 179 YGQNGQIEKALDLFRRM 195
Y G + + L L RM
Sbjct: 220 YASVGNMSEILKLLYRM 236
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 50/255 (19%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE 93
A + + ++ NS ++ CK A+ +FDQM +RDM W+TMI+GY G + E
Sbjct: 169 FAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSE 228
Query: 94 ARKLFDQM------AERDTRLWTTMLNGY---IECGMIKEARKLFDGPDAEKSVSTWSTM 144
KL +M ++ T + ++G +E G + + + G D + + T +
Sbjct: 229 ILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKT--AL 286
Query: 145 VNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVS 204
+ Y+K + E + R+ +P + V W +M+ G + G+ EKAL +F M + ++ S
Sbjct: 287 ITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSS 346
Query: 205 -------------------------------------WNTIIKALVRCGRIEDAQWHFNQ 227
N++I +CG ++ + F +
Sbjct: 347 EAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFER 406
Query: 228 MQERERDVSSWTTIV 242
M ERD+ SW I+
Sbjct: 407 MN--ERDLVSWNAII 419
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 84/187 (44%), Gaps = 15/187 (8%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
+ +M + I+ K G+ + + +V + +P +D+ W MI+G ++ G ++A +F
Sbjct: 276 FDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFS 335
Query: 100 QMAERDTRLWTTMLNGYI-ECGMIKEARKLFD-GPDAEKSV---------STWSTMVNGY 148
+M + + L + + + C + FD G V ++++ Y
Sbjct: 336 EMLQSGSDLSSEAIASVVASCAQLGS----FDLGASVHGYVLRHGYTLDTPALNSLITMY 391
Query: 149 VKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTI 208
K ++++ +F M ER VSWN ++ GY QN + KAL LF M V T+
Sbjct: 392 AKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTV 451
Query: 209 IKALVRC 215
+ L C
Sbjct: 452 VSLLQAC 458
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 82/163 (50%), Gaps = 16/163 (9%)
Query: 47 CNSFI-SRLCKE----GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF--- 98
CN F+ S L K G+ D K+FD++ ++D +W+ M+NGY KCG + K F
Sbjct: 171 CNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVM 230
Query: 99 --DQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKIN 152
DQ++ D L I+ G+ + G D E S+ +++++ Y K
Sbjct: 231 RMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK--NSLLSMYSKCG 288
Query: 153 QIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
+ ++A +LF M V+WN M+ GY Q+G +E++L F M
Sbjct: 289 RFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEM 331
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 100/247 (40%), Gaps = 62/247 (25%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
NS +S K GR D A K+F M D W+ MI+GY++ G+++E+ F +M
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL 337
Query: 105 -DTRLWTTMLNGY-----------IECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKIN 152
D ++++L I C +++ + L + S +++ Y K
Sbjct: 338 PDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISL--------DIFLTSALIDAYFKCR 389
Query: 153 QIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFR-----RMPEPERNVVSWNT 207
+ A+ +F + V + M+ GY NG +L++FR ++ E +VS
Sbjct: 390 GVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILP 449
Query: 208 IIKALV--------------------------------RCGRIEDAQWHFNQMQERERDV 235
+I L+ +CGR+ A F ++ +RD+
Sbjct: 450 VIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS--KRDI 507
Query: 236 SSWTTIV 242
SW +++
Sbjct: 508 VSWNSMI 514
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 93/213 (43%), Gaps = 13/213 (6%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF 98
S++ + C + S G+ H + + D+ T+I+ Y KCG +K A +F
Sbjct: 544 SISAALSACANLPSE--SFGKAIHGFMIKHSLAS-DVYSESTLIDMYAKCGNLKAAMNVF 600
Query: 99 DQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS----TWSTMVNGYVKINQI 154
M E++ W +++ G +K++ LF + + T+ +++ + +
Sbjct: 601 KTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDV 660
Query: 155 EEAERLFYEMPERKDVS-----WNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTII 209
+E R F M E + + ++ +G+ G++ +A + + MP P V W T++
Sbjct: 661 DEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGV-WGTLL 719
Query: 210 KALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
A +E A+ +++ + + S + ++
Sbjct: 720 GACRLHKNVELAEVASSKLMDLDPSNSGYYVLI 752
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 106/237 (44%), Gaps = 25/237 (10%)
Query: 29 FLRTRLASTFSLNTEMKRCNSFISRLC----KEGRTDHARKVFDQMPERDMRLWDTMING 84
F R R+ + + + R ++L + G+ ARKVFD+MP+RD+ MI
Sbjct: 32 FCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGA 91
Query: 85 YIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGP------------ 132
+ G +E+ F +M + +L + +I ++K +R L D
Sbjct: 92 CARNGYYQESLDFFREMYKDGLKL-----DAFIVPSLLKASRNLLDREFGKMIHCLVLKF 146
Query: 133 DAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLF 192
E S++++ Y K ++ A ++F ++ E+ V +N M+ GY N Q ++AL+L
Sbjct: 147 SYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLV 206
Query: 193 RRMP--EPERNVVSWNTIIKALVRCGRIEDAQWHFNQM--QERERDVSSWTTIVDCL 245
+ M + +V++WN +I E M + DV SWT+I+ L
Sbjct: 207 KDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGL 263
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 19/137 (13%)
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIE-------CGMIKE 124
E D + ++I+ Y K G + ARK+F + E+D ++ M++GY ++K+
Sbjct: 149 ESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKD 208
Query: 125 ARKLFDGPDAEKSVSTWSTMVNGYV------KINQIEEAERLFYEMPERKDVSWNIMMGG 178
+ L PD V TW+ +++G+ K+++I E L P+ VSW ++ G
Sbjct: 209 MKLLGIKPD----VITWNALISGFSHMRNEEKVSEILELMCLDGYKPDV--VSWTSIISG 262
Query: 179 YGQNGQIEKALDLFRRM 195
N Q EKA D F++M
Sbjct: 263 LVHNFQNEKAFDAFKQM 279
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 100/242 (41%), Gaps = 48/242 (19%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE 93
L FS ++ +S I K G +ARKVF + E+D+ +++ MI+GY E
Sbjct: 142 LVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADE 201
Query: 94 ARKLFDQM----AERDTRLWTTMLNGYIEC---GMIKEARKLFDGPDAEKSVSTWSTMVN 146
A L M + D W +++G+ + E +L + V +W+++++
Sbjct: 202 ALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIIS 261
Query: 147 GYVKINQIEEAERLFYEM------PERKDV--------------------SWNIMMG--- 177
G V Q E+A F +M P + ++++ G
Sbjct: 262 GLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLED 321
Query: 178 ----------GYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQ 227
YG+ G I +A+ LFR+ P++ V++N++I G + A F+Q
Sbjct: 322 HGFVRSALLDMYGKCGFISEAMILFRK--TPKKTTVTFNSMIFCYANHGLADKAVELFDQ 379
Query: 228 MQ 229
M+
Sbjct: 380 ME 381
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 28/237 (11%)
Query: 20 THPLIHGYPFLRTRLASTFSLN-TEMKRC--------------NSFISRLCKEGRTDHAR 64
+ P H +PF+ A F + + C N I G D AR
Sbjct: 147 SSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLAR 206
Query: 65 KVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA---ERDTRLWTTMLN-----GY 116
KVFD+MPER + W++MI+ ++ G A +LF +M E D ++L+ G
Sbjct: 207 KVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGS 266
Query: 117 IECGMIKEARKLFD-GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIM 175
+ G A L D V ++++ Y K + AE++F M +R SWN M
Sbjct: 267 LSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAM 326
Query: 176 MGGYGQNGQIEKALDLFRRMPEPERNVVSWN-TIIKALVRC---GRIEDAQWHFNQM 228
+ G+ +G+ E+A++ F RM + NV + T + L+ C G + + +F+ M
Sbjct: 327 ILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMM 383
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 11/147 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS I CK G A +VF M +RD+ W+ MI G+ G +EA FD+M ++
Sbjct: 293 NSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKREN 352
Query: 108 L---WTTMLNGYIEC---GMIKEARKLFD----GPDAEKSVSTWSTMVNGYVKINQIEEA 157
+ T + I C G + + R+ FD E ++ + +V+ + I EA
Sbjct: 353 VRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEA 412
Query: 158 ERLFYEMPERKD-VSWNIMMGGYGQNG 183
+ MP + D V W ++ + G
Sbjct: 413 IDMVMSMPMKPDAVIWRSLLDACCKKG 439
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 66/239 (27%)
Query: 60 TDHARKVFDQMPERDMRLWDTMINGYIK-CGMIKEARKLFDQMAER-----DTRLWTTML 113
++A +VFD + +W+T+I +EA L+ +M ER D + +L
Sbjct: 99 VNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVL 158
Query: 114 NG-----------YIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFY 162
+ C ++K F G V + +++ Y ++ A ++F
Sbjct: 159 KACAYIFGFSEGKQVHCQIVKHG---FGG-----DVYVNNGLIHLYGSCGCLDLARKVFD 210
Query: 163 EMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP---EPE-------------------- 199
EMPER VSWN M+ + G+ + AL LFR M EP+
Sbjct: 211 EMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLG 270
Query: 200 ----------------RNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+V+ N++I+ +CG + A+ F MQ +RD++SW ++
Sbjct: 271 TWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQ--KRDLASWNAMI 327
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 109/218 (50%), Gaps = 20/218 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ I LCK D A +F++M + D+ ++ +I+ G +A +L M E
Sbjct: 254 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE 313
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEK----SVSTWSTMVNGYVKINQIE 155
+ D + +++ +++ G + EA KL+D K V ++T++ G+ K ++E
Sbjct: 314 KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVE 373
Query: 156 EAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTII 209
E +F EM +R V++ ++ G+ Q + A +F++M +++++N ++
Sbjct: 374 EGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILL 433
Query: 210 KALVRCGRIEDAQWHFNQMQERER--DVSSWTTIVDCL 245
L G +E A F MQ+R+ D+ ++TT+++ L
Sbjct: 434 DGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEAL 471
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 109/214 (50%), Gaps = 26/214 (12%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER-----DMRLWDTMINGYIKCGMIKE 93
++N ++ N+ I KEG+ A K++D+M + D+ ++T+I G+ K ++E
Sbjct: 315 NINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEE 374
Query: 94 ARKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLF-----DG--PDAEKSVSTWS 142
++F +M++R +T +TT+++G+ + A+ +F DG PD + T++
Sbjct: 375 GMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPD----IMTYN 430
Query: 143 TMVNGYVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLF--RRMP 196
+++G +E A +F M +R V++ M+ + G++E DLF +
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 197 EPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
+ NVV++ T++ R G E+A F +M+E
Sbjct: 491 GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKE 524
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 40/208 (19%)
Query: 50 FISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAERD 105
FI+ C+ + A + +M + + ++++NG+ I EA L DQM E
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM- 174
Query: 106 TRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEA----ERLF 161
GY PD T++T+V+G + N+ EA ER+
Sbjct: 175 ---------GY--------------QPDT----VTFTTLVHGLFQHNKASEAVALVERMV 207
Query: 162 YEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIE 219
+ + V++ ++ G + G+ + AL+L +M + E +VV +NTII L + ++
Sbjct: 208 VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMD 267
Query: 220 DAQWHFNQMQER--ERDVSSWTTIVDCL 245
DA FN+M+ + + DV ++ ++ CL
Sbjct: 268 DAFDLFNKMETKGIKPDVFTYNPLISCL 295
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 109/242 (45%), Gaps = 51/242 (21%)
Query: 23 LIHGYPFLRTRLASTFSLNTEM--KRC-------NSFISRLCKEGRTDHARKVFDQMP-- 71
L+HG F + + +L M K C + I+ LCK G D A + ++M
Sbjct: 186 LVHGL-FQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG 244
Query: 72 --ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF 129
E D+ +++T+I+G K + +A LF++M + +
Sbjct: 245 KIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK---------------------- 282
Query: 130 DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKD----VSWNIMMGGYGQNGQI 185
PD V T++ +++ + +A RL +M E+ V +N ++ + + G++
Sbjct: 283 --PD----VFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKL 336
Query: 186 EKALDLFRRMPEPER---NVVSWNTIIKALVRCGRIEDAQWHFNQMQERE--RDVSSWTT 240
+A L+ M + + +VV++NT+IK + R+E+ F +M +R + ++TT
Sbjct: 337 VEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTT 396
Query: 241 IV 242
++
Sbjct: 397 LI 398
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 15/130 (11%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRL----WDTMINGYIKCGMIKEARKLFDQMAE 103
N + LC G + A VF+ M +RDM+L + TMI K G +++ LF ++
Sbjct: 430 NILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSL 489
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKLF-----DGPDAEKSVSTWSTMVNGYVKINQI 154
+ + +TTM++G+ G+ +EA LF DGP + T++T++ ++
Sbjct: 490 KGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGP--LPNSGTYNTLIRARLRDGDE 547
Query: 155 EEAERLFYEM 164
+ L EM
Sbjct: 548 AASAELIKEM 557
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYI 117
G+ H V +M + +M + + +++ Y KCGM+ EA +F M+ +D W M+ GY
Sbjct: 248 GKQLHCFAVTSEMIQ-NMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYS 306
Query: 118 ECGMIKEARKLFDGPDAEK---SVSTWSTMVNGYVKINQIEEAERLFYEMPER----KDV 170
+ G ++A +LF+ EK V TWS ++GY + EA + +M +V
Sbjct: 307 QIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEV 366
Query: 171 SWNIMMGGYGQNG-----------QIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIE 219
+ ++ G G I+ +DL R+ + N+V N +I +C +++
Sbjct: 367 TLISVLSGCASVGALMHGKEIHCYAIKYPIDL-RKNGHGDENMV-INQLIDMYAKCKKVD 424
Query: 220 DAQWHFNQMQERERDVSSWTTIV 242
A+ F+ + +ERDV +WT ++
Sbjct: 425 TARAMFDSLSPKERDVVTWTVMI 447
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 110/274 (40%), Gaps = 71/274 (25%)
Query: 1 MAKKLPPLSFILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKR----CNSFISRLCK 56
+ LPP + L TH L + F++ +EM + N + K
Sbjct: 232 LVNVLPPCA-------SLGTHSL--------GKQLHCFAVTSEMIQNMFVGNCLVDMYAK 276
Query: 57 EGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTM 112
G D A VF M +D+ W+ M+ GY + G ++A +LF++M E D W+
Sbjct: 277 CGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAA 336
Query: 113 LNGYIECGMIKEA----RKLFDG---PDAEKSVSTWS----------------------- 142
++GY + G+ EA R++ P+ +S S
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPI 396
Query: 143 ---------------TMVNGYVKINQIEEAERLFYEMP--ERKDVSWNIMMGGYGQNGQI 185
+++ Y K +++ A +F + ER V+W +M+GGY Q+G
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDA 456
Query: 186 EKALDLFRRMPEPE-RNVVSWNTIIKALVRCGRI 218
KAL+L M E + + + TI ALV C +
Sbjct: 457 NKALELLSEMFEEDCQTRPNAFTISCALVACASL 490
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 106/260 (40%), Gaps = 59/260 (22%)
Query: 10 FILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQ 69
F LMH+ L+ P + +PF+ K C S C G + HA +
Sbjct: 115 FGLMHS--LSWTPDNYTFPFV-------------FKACGEISSVRC--GESAHALSLVTG 157
Query: 70 MPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF 129
++ + + ++ Y +C + +ARK+FD+M+ D W +++ Y + G K A ++F
Sbjct: 158 FIS-NVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMF 216
Query: 130 DGPDAE-----------------KSVSTWS----------------------TMVNGYVK 150
E S+ T S +V+ Y K
Sbjct: 217 SRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAK 276
Query: 151 INQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTI 208
++EA +F M + VSWN M+ GY Q G+ E A+ LF +M E + +VV+W+
Sbjct: 277 CGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAA 336
Query: 209 IKALVRCGRIEDAQWHFNQM 228
I + G +A QM
Sbjct: 337 ISGYAQRGLGYEALGVCRQM 356
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 42/216 (19%)
Query: 36 STFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEAR 95
+ F+++ + C S + + G+ HA + +Q + + + +I+ Y KCG I +AR
Sbjct: 476 NAFTISCALVACASLAAL--RIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDAR 533
Query: 96 KLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIE 155
+FD M ++ WT+++ GY G +EA +FD
Sbjct: 534 LVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFD------------------------- 568
Query: 156 EAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM-------PEPERNVVSWNTI 208
E R+ +++ V+ +++ +G I++ ++ F RM P PE + +
Sbjct: 569 EMRRIGFKL---DGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEH----YACL 621
Query: 209 IKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVDC 244
+ L R GR+ A +M V W + C
Sbjct: 622 VDLLGRAGRLNAALRLIEEMPMEPPPV-VWVAFLSC 656
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 101/201 (50%), Gaps = 17/201 (8%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERD----MRLWDTMINGYIKCGMIKEARKLFDQMAER 104
S + CK+G KVF M RD + + +M++ + + G + +A F+ + E
Sbjct: 345 SLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404
Query: 105 ----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEA 157
D ++T ++ GY GMI A L + V T++T+++G K + EA
Sbjct: 405 GLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 464
Query: 158 ERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKA 211
++LF EM ER + I++ G+ + G ++ A++LF++M E +VV++NT++
Sbjct: 465 DKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDG 524
Query: 212 LVRCGRIEDAQWHFNQMQERE 232
+ G I+ A+ + M +E
Sbjct: 525 FGKVGDIDTAKEIWADMVSKE 545
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 102/212 (48%), Gaps = 17/212 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ IS +G + A ++ + MP + ++T+ING K G + A+++F +M
Sbjct: 274 NTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR 333
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
D+ + ++L + G + E K+F D + +S+M++ + + +++
Sbjct: 334 SGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDK 393
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIK 210
A F + E +V + I++ GY + G I A++L M + +VV++NTI+
Sbjct: 394 ALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILH 453
Query: 211 ALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
L + + +A FN+M ER S+T +
Sbjct: 454 GLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 108/222 (48%), Gaps = 29/222 (13%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N ++ LCK+G+ + Q+ E+ D+ ++T+I+ Y G+++EA +L + M
Sbjct: 239 NIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPG 298
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTMVNGYVKIN 152
+ + T++NG + G + A+++F PD+ +T+ +++ K
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS----TTYRSLLMEACKKG 354
Query: 153 QIEEAERLFYEMPERKD----VSWNIMMGGYGQNGQIEKALDLFRRMPEP---ERNVVSW 205
+ E E++F +M R V ++ MM + ++G ++KAL F + E NV+ +
Sbjct: 355 DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI-Y 413
Query: 206 NTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
+I+ R G I A N+M ++ DV ++ TI+ L
Sbjct: 414 TILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGL 455
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 79/163 (48%), Gaps = 17/163 (10%)
Query: 50 FISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAER- 104
++ LC +G A +V+D+M ++++ + ++MI GY + G + ++M
Sbjct: 556 LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Query: 105 ---DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKS-----VSTWSTMVNGYVKINQIEE 156
D + T++ G++ + +A L + E+ V T++++++G+ + NQ++E
Sbjct: 616 FVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKE 675
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRM 195
AE + +M ER ++ M+ G+ + +A + M
Sbjct: 676 AEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEM 718
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 67/136 (49%), Gaps = 17/136 (12%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMA 102
CNS I C+ G ++M D ++T+I G+++ + +A L +M
Sbjct: 588 CNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKME 647
Query: 103 ER------DTRLWTTMLNGYIECGMIKEA----RKLFD-GPDAEKSVSTWSTMVNGYVKI 151
E D + ++L+G+ +KEA RK+ + G + ++S T++ M+NG+V
Sbjct: 648 EEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRS--TYTCMINGFVSQ 705
Query: 152 NQIEEAERLFYEMPER 167
+ + EA R+ EM +R
Sbjct: 706 DNLTEAFRIHDEMLQR 721
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 44/239 (18%)
Query: 17 KLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMR 76
KLN I G F L + F LN + N +++ CKEG A+KVFD++ +R ++
Sbjct: 217 KLNPTGTIWG--FYMEILDAGFPLNVYV--FNILMNKFCKEGNISDAQKVFDEITKRSLQ 272
Query: 77 ----LWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGP 132
++T+INGY K G + E +L QM + TR P
Sbjct: 273 PTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTR------------------------P 308
Query: 133 DAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKA 188
D V T+S ++N K N+++ A LF EM +R DV + ++ G+ +NG+I+
Sbjct: 309 D----VFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLM 364
Query: 189 LDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVD 243
+ +++M + ++V +NT++ + G + A+ + M R D ++TT++D
Sbjct: 365 KESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLID 423
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 96/185 (51%), Gaps = 11/185 (5%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM-AERDT 106
NS + G + +A KVF +MP RD+ W +I G+ + G+ KEA F +M E +
Sbjct: 145 NSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVEPNL 204
Query: 107 RLWTTML--NGYIEC-GMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYE 163
+ +L +G + C + K L + S+ T + +++ YVK Q+ +A R+F E
Sbjct: 205 ATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGE 264
Query: 164 MPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP-----EPERNVVSWNTIIKALVRCGRI 218
+ ++ VSWN M+ G + ++A+DLF M +P+ ++++ +++ A G +
Sbjct: 265 LEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILT--SVLSACASLGAV 322
Query: 219 EDAQW 223
+ +W
Sbjct: 323 DHGRW 327
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 109/237 (45%), Gaps = 18/237 (7%)
Query: 11 ILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQM 70
+L+ + ++ L G L + AS SL T N+ I K + A +VF ++
Sbjct: 210 VLVSSGRVGCLSLGKGIHGLILKRASLISLETG----NALIDMYVKCEQLSDAMRVFGEL 265
Query: 71 PERDMRLWDTMINGYIKCGMIKEARKLFDQMAER-----DTRLWTTMLNGYIECGMIKEA 125
++D W++MI+G + C KEA LF M D + T++L+ G +
Sbjct: 266 EKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHG 325
Query: 126 R-----KLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYG 180
R L G + + T +V+ Y K IE A +F + + +WN ++GG
Sbjct: 326 RWVHEYILTAGIKWDTHIGT--AIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLA 383
Query: 181 QNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDV 235
+G ++L F M + + N+V++ + A G +++ + +F++M+ RE ++
Sbjct: 384 IHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNL 440
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 105/215 (48%), Gaps = 19/215 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
S I LC+ + A + F +M + D ++ T+I+G+ K G I+ A K F +M
Sbjct: 320 GSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS 379
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
RD +T +++G+ + G + EA KLF E T++ ++NGY K +++
Sbjct: 380 RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKD 439
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIK 210
A R+ M + V++ ++ G + G ++ A +L M + N+ ++N+I+
Sbjct: 440 AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499
Query: 211 ALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVD 243
L + G IE+A + + D ++TT++D
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 104/214 (48%), Gaps = 21/214 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQM----PERDMRLWDTMINGYIKCGMIKEARKLFDQM-- 101
+ I LCKEG D A ++ +M + ++ +++++NG K G I+EA KL +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 102 --AERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
DT +TT+++ Y + G + +A+++ G + ++ T++ ++NG+ +E+
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPE----PERNVVSWNTI 208
E+L M + ++N ++ Y ++ A +++ M P+ ++ +
Sbjct: 580 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK--TYENL 637
Query: 209 IKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+K + +++A + F +M+ + VS T V
Sbjct: 638 VKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 98/199 (49%), Gaps = 17/199 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
NS ++ LCK G + A K+ + D + T+++ Y K G + +A+++ +M
Sbjct: 495 NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 554
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
+ + + ++NG+ GM+++ KL + + +T++++V Y N ++
Sbjct: 555 KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKA 614
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIK 210
A ++ +M R ++ ++ G+ + +++A LF+ M +V +++ +IK
Sbjct: 615 ATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIK 674
Query: 211 ALVRCGRIEDAQWHFNQMQ 229
++ + +A+ F+QM+
Sbjct: 675 GFLKRKKFLEAREVFDQMR 693
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 105/215 (48%), Gaps = 19/215 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
S I LC+ + A + F +M + D ++ T+I+G+ K G I+ A K F +M
Sbjct: 320 GSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS 379
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
RD +T +++G+ + G + EA KLF E T++ ++NGY K +++
Sbjct: 380 RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKD 439
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIK 210
A R+ M + V++ ++ G + G ++ A +L M + N+ ++N+I+
Sbjct: 440 AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499
Query: 211 ALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVD 243
L + G IE+A + + D ++TT++D
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 104/214 (48%), Gaps = 21/214 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQM----PERDMRLWDTMINGYIKCGMIKEARKLFDQM-- 101
+ I LCKEG D A ++ +M + ++ +++++NG K G I+EA KL +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 102 --AERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
DT +TT+++ Y + G + +A+++ G + ++ T++ ++NG+ +E+
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPE----PERNVVSWNTI 208
E+L M + ++N ++ Y ++ A +++ M P+ ++ +
Sbjct: 580 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK--TYENL 637
Query: 209 IKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+K + +++A + F +M+ + VS T V
Sbjct: 638 VKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 98/199 (49%), Gaps = 17/199 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
NS ++ LCK G + A K+ + D + T+++ Y K G + +A+++ +M
Sbjct: 495 NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 554
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
+ + + ++NG+ GM+++ KL + + +T++++V Y N ++
Sbjct: 555 KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKA 614
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIK 210
A ++ +M R ++ ++ G+ + +++A LF+ M +V +++ +IK
Sbjct: 615 ATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIK 674
Query: 211 ALVRCGRIEDAQWHFNQMQ 229
++ + +A+ F+QM+
Sbjct: 675 GFLKRKKFLEAREVFDQMR 693
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 23/242 (9%)
Query: 23 LIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTD---HARKVFDQMPERDMRLWD 79
LI G F + + F N+ + + I K G D + KVF ++ D+ +W+
Sbjct: 256 LIGGRQFHGKLIKAGFHQNSHVG--SGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWN 313
Query: 80 TMINGY-IKCGMIKEARKLFDQMAERDTR----------LWTTMLNGYIECGMIKEARKL 128
TMI+GY + + +EA K F QM R + L+ +C I
Sbjct: 314 TMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIK 373
Query: 129 FDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKA 188
P SV+ + +++ Y K +++A +F MPE VS+N M+ GY Q+G +A
Sbjct: 374 SHIPSNRISVN--NALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEA 431
Query: 189 LDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER---ERDVSSWTTIVD 243
L L++RM + N +++ ++ A CG++++ Q +FN M+E E + ++ ++D
Sbjct: 432 LLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMID 491
Query: 244 CL 245
L
Sbjct: 492 LL 493
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 17/176 (9%)
Query: 28 PFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIK 87
F T + FS N + K+ + AR++FD++P+ D ++T+I+GY
Sbjct: 65 AFYSTEEPNVFSYNV-------IVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYAD 117
Query: 88 CGMIKEARKLFDQMAERDTRLWTTMLNGYIE--CGMIKEARKLF-----DGPDAEKSVST 140
A LF +M + + L+G I C + ++L G D+ SV+
Sbjct: 118 ARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVN- 176
Query: 141 WSTMVNGYVKINQIEEAERLFYEMPE-RKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
+ V Y K + EA +FY M E R +VSWN M+ YGQ+ + KAL L++ M
Sbjct: 177 -NAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEM 231
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 23/168 (13%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
IHG ++ S+N N+ IS K G AR VFD+MPE + ++ MI
Sbjct: 367 IHGLAIKSHIPSNRISVN------NALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIK 420
Query: 84 GYIKCGMIKEARKLFDQMAERDTR----LWTTMLNGYIECGMIKEARKLFDG-------- 131
GY + G EA L+ +M + + +L+ CG + E ++ F+
Sbjct: 421 GYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIE 480
Query: 132 PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER-KDVSWNIMMGG 178
P+AE +S M++ + ++EEAER MP + V+W ++G
Sbjct: 481 PEAEH----YSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGA 524
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 13/130 (10%)
Query: 66 VFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEA 125
+ + ERD+ ++ Y+K + T L +N Y +CG + A
Sbjct: 15 LLKSVAERDLFTGKSLHALYVK------------SIVASSTYLSNHFVNLYSKCGRLSYA 62
Query: 126 RKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQI 185
R F + E +V +++ +V Y K ++I A +LF E+P+ VS+N ++ GY +
Sbjct: 63 RAAFYSTE-EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARET 121
Query: 186 EKALDLFRRM 195
A+ LF+RM
Sbjct: 122 FAAMVLFKRM 131
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 17/198 (8%)
Query: 50 FISRLCKEGRTDHARKVFDQMPERDMRL----WDTMINGYIKCGMIKEARKLFDQMA--- 102
I C+ G+ D A +M + ++L ++++ING+ K G I A +M
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467
Query: 103 -ERDTRLWTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKINQIEEAE 158
E +T+++ GY G I +A +L+ G S+ T++T+++G + I +A
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527
Query: 159 RLFYEMPE----RKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIKAL 212
+LF EM E V++N+M+ GY + G + KA + + M E + S+ +I L
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587
Query: 213 VRCGRIEDAQWHFNQMQE 230
G+ +A+ + + +
Sbjct: 588 CLTGQASEAKVFVDGLHK 605
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 48 NSFISRLCKEGRTDHA----RKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
+S + L K G+ + A ++V D ++ +++ +I+ K EA LFD+M +
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGK 395
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
R ++ +++ + G + A + SV +++++NG+ K I
Sbjct: 396 IGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISA 455
Query: 157 AERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIK 210
AE EM +K V++ +MGGY G+I KAL L+ M ++ ++ T++
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS 515
Query: 211 ALVRCGRIEDAQWHFNQMQE 230
L R G I DA FN+M E
Sbjct: 516 GLFRAGLIRDAVKLFNEMAE 535
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 111/253 (43%), Gaps = 35/253 (13%)
Query: 22 PLIHGYPFL-RTRLASTFSLNTEMKRC-------NSFISRLCKEGRTDHARKVFDQMPER 73
PLIHG + A F C + C+EG+ + A V +M +R
Sbjct: 582 PLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQR 641
Query: 74 ----DMRLWDTMINGYIKCGMIKEARKLF--------DQMAERDTRLWTTMLNGYIECGM 121
D+ + +I+G +K + RKLF D+ + D ++T+M++ + G
Sbjct: 642 GVDLDLVCYGVLIDGSLK----HKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGD 697
Query: 122 IKEARKLFDGPDAEKSVS---TWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGG 178
KEA ++D E V T++ ++NG K + EAE L +M V + G
Sbjct: 698 FKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGC 757
Query: 179 YGQ---NGQI--EKALDLFRRMPEPE-RNVVSWNTIIKALVRCGRIEDAQWHFNQM--QE 230
+ G++ +KA++L + + N ++N +I+ R GRIE+A +M
Sbjct: 758 FLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDG 817
Query: 231 RERDVSSWTTIVD 243
D ++TT+++
Sbjct: 818 VSPDCITYTTMIN 830
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 100/201 (49%), Gaps = 22/201 (10%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
S + C +G+ + A +++ +M + + + T+++G + G+I++A KLF++MAE
Sbjct: 476 TSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE 535
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKLFDGPDAEKSVS----TWSTMVNGYVKINQIE 155
+ + + M+ GY E G + +A + F EK + ++ +++G Q
Sbjct: 536 WNVKPNRVTYNVMIEGYCEEGDMSKAFE-FLKEMTEKGIVPDTYSYRPLIHGLCLTGQAS 594
Query: 156 EA----ERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWNTII 209
EA + L E ++ + ++ G+ + G++E+AL + + M + + ++V + +I
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654
Query: 210 KALVRCGRIEDAQWHFNQMQE 230
+ + +D + F ++E
Sbjct: 655 DGSL---KHKDRKLFFGLLKE 672
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 117/227 (51%), Gaps = 27/227 (11%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERD----MRLWDTMINGYIKCGMIKEA 94
S++ ++ +S I+ C R D A+ +F+ M +D + ++T+I G+ K + E
Sbjct: 356 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415
Query: 95 RKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLF-----DG--PDAEKSVSTWST 143
+LF +M++R +T +TT+++G+ + A+ +F DG PD + T+S
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPD----IMTYSI 471
Query: 144 MVNGYVKINQIEEAERLFYEMPERK---DV-SWNIMMGGYGQNGQIEKALDLF--RRMPE 197
+++G ++E A +F + K D+ ++NIM+ G + G++E DLF +
Sbjct: 472 LLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 531
Query: 198 PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE--RDVSSWTTIV 242
+ NVV++ T++ R G E+A F +M+E D ++ T++
Sbjct: 532 VKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 120/250 (48%), Gaps = 29/250 (11%)
Query: 21 HPLIHGYPFLRTRLASTFSLNTEM--KRCNS-------FISRLCKEGRTDHARKVFDQMP 71
+ LIHG F R + +L M K C ++ LCK G D A + +M
Sbjct: 190 NTLIHGL-FRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME 248
Query: 72 ----ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIEC----GMIK 123
E + +++T+I+ + +A LF +M + R N I C G
Sbjct: 249 QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 308
Query: 124 EARKLFDGPDAEK---SVSTWSTMVNGYVKINQIEEAERLFYEMPERK---DV-SWNIMM 176
+A +L K +V T+S +++ +VK ++ EAE+L+ EM +R D+ +++ ++
Sbjct: 309 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368
Query: 177 GGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE-- 232
G+ + ++++A +F M + NVV++NT+IK + R+++ F +M +R
Sbjct: 369 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428
Query: 233 RDVSSWTTIV 242
+ ++TT++
Sbjct: 429 GNTVTYTTLI 438
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 90/186 (48%), Gaps = 17/186 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ I CK R D ++F +M +R + + T+I+G+ + A+ +F QM
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIEE 156
D ++ +L+G G ++ A +F+ E + T++ M+ G K ++E+
Sbjct: 460 DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWNTIIK 210
LF + + V++ MM G+ + G E+A LFR M E P + ++NT+I+
Sbjct: 520 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIR 579
Query: 211 ALVRCG 216
A +R G
Sbjct: 580 AHLRDG 585
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 19/213 (8%)
Query: 50 FISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFDQMAER- 104
I+ C+ + A V +M E D+ ++++NG+ I +A L QM E
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 105 ---DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAE 158
D+ + T+++G EA L D + + T+ +VNG K I+ A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 159 RLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKAL 212
L +M + K V +N ++ + AL+LF M NVV++N++I+ L
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 213 VRCGRIEDAQWHFNQMQERE--RDVSSWTTIVD 243
GR DA + M ER+ +V +++ ++D
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALID 334
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 94/196 (47%), Gaps = 10/196 (5%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
N+ ++ K G HA +VFD+MP RD W +++ + + + +F +
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 101
Query: 105 --DTRLWTTMLNGYIECGMIKEARKL---FDGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
D +++ ++ G I R++ F + S++V+ Y K + A+
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKA 161
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIE 219
+F + + +SW M+ GY ++G+ E+AL+LFR + P +N+ SW +I V+ G+
Sbjct: 162 VFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRIL--PVKNLYSWTALISGFVQSGKGL 219
Query: 220 DAQWHFNQMQERERDV 235
+A F +M+ D+
Sbjct: 220 EAFSVFTEMRRERVDI 235
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 94/224 (41%), Gaps = 41/224 (18%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
+S + K G + A+ VFD + ++ W M++GY K G +EA +LF + ++
Sbjct: 144 SSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLY 203
Query: 108 LWTTMLNGYIECGMIKEARKLFD-------------------GPDAEKSVSTWSTMVNG- 147
WT +++G+++ G EA +F G A + S V+G
Sbjct: 204 SWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGL 263
Query: 148 -------------------YVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKA 188
Y K + + A+ +F M R VSW ++ G Q+GQ EKA
Sbjct: 264 VIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKA 323
Query: 189 LDLFRRMPE--PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
L L+ M + N V++ +I A G +E + F M +
Sbjct: 324 LALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTK 367
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 107/274 (39%), Gaps = 85/274 (31%)
Query: 50 FISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAERD 105
S K G + A VF++M + R + T+IN YI+ G +K+AR LF +M+ D
Sbjct: 232 LFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPD 291
Query: 106 TRLWTTMLNGY----------------------------------------IECGMIKEA 125
W M++G+ ++ G++ A
Sbjct: 292 VVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHA 351
Query: 126 RKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQI 185
+ G ++ S++V+ Y K ++E A ++F + E+ DV WN M+ GY NG+
Sbjct: 352 EAIKLG--LASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGES 409
Query: 186 EKALDLFRRMPEP-------------------------------------ERNVVSWNTI 208
K ++LF M +N+ N +
Sbjct: 410 HKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNAL 469
Query: 209 IKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+ +CG +EDA+ F +M +RD +W TI+
Sbjct: 470 VDMYAKCGALEDARQIFERMC--DRDNVTWNTII 501
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 83/156 (53%), Gaps = 15/156 (9%)
Query: 51 ISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
+S +E + R++ M ER+ +++ Y KC I +AR++F+ + + +T
Sbjct: 167 LSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNT 226
Query: 107 RLWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTMVNGYVKINQIEEAER 159
WT + +GY++ G+ +EA +F+ PD V T++N Y+++ ++++A
Sbjct: 227 VCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFV----TVINTYIRLGKLKDARL 282
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
LF EM V+WN+M+ G+G+ G A++ F M
Sbjct: 283 LFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNM 318
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 89/179 (49%), Gaps = 41/179 (22%)
Query: 73 RDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIE-------------- 118
+++ + + +++ Y KCG +++AR++F++M +RD W T++ Y++
Sbjct: 461 KNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM 520
Query: 119 --CGMIKEA-------------RKLFDGPDA---------EKSVSTWSTMVNGYVKINQI 154
CG++ + L+ G ++ + T S++++ Y K I
Sbjct: 521 NLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGII 580
Query: 155 EEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNV--VSWNTIIKA 211
++A ++F +PE VS N ++ GY QN +E+A+ LF+ M N +++ TI++A
Sbjct: 581 KDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEA 638
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 65/242 (26%)
Query: 63 ARKVFDQMPER----------------------DMRLWDTMINGYIKCGMIKEARKLFDQ 100
+RKVFD+MP+R + RL + +++ Y KC + A K FD
Sbjct: 61 SRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDF 120
Query: 101 MAERDTRLWTTMLNGYIECG----MIKEARKLFDG---PDA------------------- 134
+ E+D W +ML+ Y G +++ LF+ P+
Sbjct: 121 L-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFG 179
Query: 135 ------------EKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQN 182
E++ +V+ Y K ++I +A R+F + + V W + GY +
Sbjct: 180 RQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKA 239
Query: 183 GQIEKALDLFRRM-PEPER-NVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTT 240
G E+A+ +F RM E R + +++ T+I +R G+++DA+ F +M DV +W
Sbjct: 240 GLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS--SPDVVAWNV 297
Query: 241 IV 242
++
Sbjct: 298 MI 299
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 81/168 (48%), Gaps = 7/168 (4%)
Query: 35 ASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEA 94
A L + + +S +S K + + A KVF+ + E++ W+ MI GY G +
Sbjct: 353 AIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKV 412
Query: 95 RKLFDQMAER----DTRLWTTMLN---GYIECGMIKEARKLFDGPDAEKSVSTWSTMVNG 147
+LF M D +T++L+ + M + + K++ + +V+
Sbjct: 413 MELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDM 472
Query: 148 YVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
Y K +E+A ++F M +R +V+WN ++G Y Q+ +A DLF+RM
Sbjct: 473 YAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM 520
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 11/194 (5%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
+ + K R AR+VF+ + + + W + +GY+K G+ +EA +F++M + R
Sbjct: 199 GALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHR 258
Query: 108 ----LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYE 163
+ T++N YI G +K+AR LF G + V W+ M++G+ K A F+
Sbjct: 259 PDHLAFVTVINTYIRLGKLKDARLLF-GEMSSPDVVAWNVMISGHGKRGCETVAIEYFFN 317
Query: 164 MPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP------ERNVVSWNTIIKALVRCGR 217
M + S +G I LDL + N+ ++++ +C +
Sbjct: 318 MRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEK 377
Query: 218 IEDAQWHFNQMQER 231
+E A F ++E+
Sbjct: 378 MEAAAKVFEALEEK 391
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 109/276 (39%), Gaps = 55/276 (19%)
Query: 14 HAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER 73
H H L +H L+ L+ ++ +S I K G ARKVF +PE
Sbjct: 541 HVHGLYQGKQVHC-------LSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEW 593
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKL---FD 130
+ + +I GY + ++EA LF +M R +E E+ L F
Sbjct: 594 SVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFH 652
Query: 131 GPDAEKSVSTWS-----TMVNGYVKINQIEEAERLFYEMPERKD-VSWNIMMGGYGQNGQ 184
G ++ S+ +++ Y+ + EA LF E+ K V W MM G+ QNG
Sbjct: 653 GQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGF 712
Query: 185 IEKALDLFRRM------PEPERNV-------------------------------VSWNT 207
E+AL ++ M P+ V ++ NT
Sbjct: 713 YEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNT 772
Query: 208 IIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVD 243
+I +CG ++ + F++M+ R +V SW ++++
Sbjct: 773 LIDMYAKCGDMKGSSQVFDEMRRRS-NVVSWNSLIN 807
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 15/179 (8%)
Query: 63 ARKVFDQMPE-RDMRLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYI 117
A +F ++ + + LW M++G+ + G +EA K + +M D + T+L
Sbjct: 684 ACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCS 743
Query: 118 ECGMIKEARKLFD-----GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV-S 171
++E R + D ++ S +T+++ Y K ++ + ++F EM R +V S
Sbjct: 744 VLSSLREGRAIHSLIFHLAHDLDELTS--NTLIDMYAKCGDMKGSSQVFDEMRRRSNVVS 801
Query: 172 WNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
WN ++ GY +NG E AL +F M + + +++ ++ A G++ D + F M
Sbjct: 802 WNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMM 860
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 80/149 (53%), Gaps = 11/149 (7%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF-DGP 132
++ + ++++ Y KC ++ A K+F+ + E++ W M+ GY G + +LF D
Sbjct: 361 NIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMK 420
Query: 133 DAEKSVS--TWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGG-----YGQNGQI 185
+ ++ T++++++ + +E + F+ + +K ++ N+ +G Y + G +
Sbjct: 421 SSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGAL 479
Query: 186 EKALDLFRRMPEPERNVVSWNTIIKALVR 214
E A +F RM + R+ V+WNTII + V+
Sbjct: 480 EDARQIFERMCD--RDNVTWNTIIGSYVQ 506
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 81/163 (49%), Gaps = 17/163 (10%)
Query: 80 TMINGYIKCGMIKEARKLFDQMAE-RDTRLWTTMLNGYIECGMIKEARKLF-----DG-- 131
+++ Y+ + EA LF +++ + LWT M++G+ + G +EA K + DG
Sbjct: 670 SLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVL 729
Query: 132 PDAEKSVSTWSTMVNGYVKINQIEEAERL----FYEMPERKDVSWNIMMGGYGQNGQIEK 187
PD +T+ T++ ++ + E + F+ + +++ N ++ Y + G ++
Sbjct: 730 PDQ----ATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKG 785
Query: 188 ALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
+ +F M NVVSWN++I + G EDA F+ M++
Sbjct: 786 SSQVFDEMRR-RSNVVSWNSLINGYAKNGYAEDALKIFDSMRQ 827
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 104/237 (43%), Gaps = 48/237 (20%)
Query: 52 SRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIK-CGMIKEARKLFDQMAERDTRLWT 110
++ +G D RKVFD+M + + W +I GY+K C + EA LF +M +
Sbjct: 313 AKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPN 372
Query: 111 --TMLNGYIECGMIKEAR--KLFDGPDAEKSVSTWSTMVNG----YVKINQIEEAERLFY 162
T + + CG + + R K G ++ +++ S++ N +VK +++E+A+R F
Sbjct: 373 HFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFE 432
Query: 163 EMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSW----------------- 205
+ E+ VS+N + G +N E+A L + E E V ++
Sbjct: 433 SLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRK 492
Query: 206 --------------------NTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
N +I +CG I+ A FN M+ R+V SWT+++
Sbjct: 493 GEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME--NRNVISWTSMI 547
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 91/219 (41%), Gaps = 13/219 (5%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
L+ CN+ IS K G D A +VF+ M R++ W +MI G+ K G +
Sbjct: 503 LGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLET 562
Query: 98 FDQMAERDTR----LWTTMLNGYIECGMIKEA----RKLFDGPDAEKSVSTWSTMVNGYV 149
F+QM E + + +L+ G++ E +++ + + ++ MV+
Sbjct: 563 FNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLC 622
Query: 150 KINQIEEAERLFYEMPERKDV-SWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTI 208
+ + +A MP + DV W +G + E R++ E + N +
Sbjct: 623 RAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQ 682
Query: 209 IKALVRC-GRIEDAQWHFNQMQER---ERDVSSWTTIVD 243
+ + C G+ E++ +M+ER + SW + D
Sbjct: 683 LSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGD 721
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRL----WDTMINGYIKCGMIKEARKLFDQMAE 103
N+F+ C+ + A K+ ++ ER++ + + ++++G G I++ ++ Q+ +
Sbjct: 443 NTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVK 502
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVK----INQIE 155
+ + +++ Y +CG I A ++F+ + ++V +W++M+ G+ K I +E
Sbjct: 503 LGLSCNQPVCNALISMYSKCGSIDTASRVFNFME-NRNVISWTSMITGFAKHGFAIRVLE 561
Query: 156 EAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER---NVVSWNTIIKAL 212
++ E + +V++ ++ G + + F M E + + + ++ L
Sbjct: 562 TFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLL 621
Query: 213 VRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
R G + DA N M + DV W T +
Sbjct: 622 CRAGLLTDAFEFINTM-PFQADVLVWRTFL 650
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 108/263 (41%), Gaps = 71/263 (26%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
F L+++ NS IS G D A ++FD ++D+ W MI+G+++ G EA
Sbjct: 132 FGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVY 191
Query: 98 FDQMAE--------------------RDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKS 137
F +M + D R ++ Y+E G +K
Sbjct: 192 FVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVK------------CD 239
Query: 138 VSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE 197
V S++V+ Y K + ++A+++F EMP R V+W ++ GY Q+ +K + +F M +
Sbjct: 240 VFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLK 299
Query: 198 P-------------------------------------ERNVVSWNTIIKALVRCGRIED 220
E N + T+I V+CG +E+
Sbjct: 300 SDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEE 359
Query: 221 AQWHFNQMQERERDVSSWTTIVD 243
A F ++ E++V +WT +++
Sbjct: 360 AILVFERLH--EKNVYTWTAMIN 380
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 21/183 (11%)
Query: 45 KRCNSFISRLCKEGRTDHARKVFDQMPERDMRL----WDTMINGYIKCGMIKEARKLFDQ 100
K +S +S G R+V M + + + T+I+ Y+KCG ++EA +F++
Sbjct: 307 KTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFER 366
Query: 101 MAERDTRLWTTMLNGYIECGMIKEARKLF-------DGPDAEKSVSTWSTMVNGYVKINQ 153
+ E++ WT M+NG+ G ++A LF P+ ++ S +G
Sbjct: 367 LHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHG----GL 422
Query: 154 IEEAERLFYEMPER-----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTI 208
+EE RLF M R K + M+ +G+ G +E+A L RMP NVV W +
Sbjct: 423 VEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVV-WGAL 481
Query: 209 IKA 211
+
Sbjct: 482 FGS 484
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 96/229 (41%), Gaps = 43/229 (18%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYI 117
GR+ H + + D+ + ++++ Y KC +A+K+FD+M R+ WT ++ GY+
Sbjct: 223 GRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYV 282
Query: 118 ECGMIKEARKLF------DGPDAEKSVST------------------------------- 140
+ + +F D EK++S+
Sbjct: 283 QSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTT 342
Query: 141 -WSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM--PE 197
+T+++ YVK +EEA +F + E+ +W M+ G+ +G A DLF M
Sbjct: 343 AGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSH 402
Query: 198 PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER---ERDVSSWTTIVD 243
N V++ ++ A G +E+ + F M+ R E + +VD
Sbjct: 403 VSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVD 451
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 118/284 (41%), Gaps = 64/284 (22%)
Query: 7 PLSFILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKV 66
PL F+ H H L+ P TR L+ ++RC + ++ +AR++
Sbjct: 11 PLHFL----HLKQIHCLLLTSPIFYTR--RDLFLSRLLRRCCTAATQF------RYARRL 58
Query: 67 FDQMPERDMRLWDTMI-----------------------NGYIKC-----GMIKEARKLF 98
Q+ ++LWD++I NG I ++K KL
Sbjct: 59 LCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLR 118
Query: 99 DQMA------------ERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVN 146
D + D + ++++GY G+ A +LFDG + +K V TW+ M++
Sbjct: 119 DSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAE-DKDVVTWTAMID 177
Query: 147 GYVKINQIEEAERLFYEMPERKDVSWNIM--MGGYGQNGQIE------KALDLFRRMPEP 198
G+V+ EA F EM ++ V+ N M + G++E L+
Sbjct: 178 GFVRNGSASEAMVYFVEM-KKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRV 236
Query: 199 ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+ +V ++++ +C +DAQ F++M R+V +WT ++
Sbjct: 237 KCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP--SRNVVTWTALI 278
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 108/219 (49%), Gaps = 27/219 (12%)
Query: 50 FISRLCKEGRTDHARKVFDQMPERDM----RLWDTMINGYIKCGMIKEARKLFDQMAER- 104
I CK R + A + ++M E+ + ++IN K + A +LF ++ E
Sbjct: 415 LIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENF 474
Query: 105 ---DTRLWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTMVNGYVKINQI 154
+R++ M+ + +CG + EA LF+ GPD V ++ +++G VK I
Sbjct: 475 GNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPD----VYAYNALMSGMVKAGMI 530
Query: 155 EEAERLFYEMPE---RKDV-SWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTI 208
EA L +M E R D+ S NI++ G+ + G +A+++F + + + V++NT+
Sbjct: 531 NEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTL 590
Query: 209 IKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
+ G E+A +M+++ E D ++++I+D +
Sbjct: 591 LGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 19/211 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER-----DMRLWDTMINGYIKCGMIKEARKLFDQMA 102
NS I L +EG+ + +V+ +M D + +I+ Y K G A +LFD+M
Sbjct: 201 NSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMK 260
Query: 103 ER----DTRLWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIE 155
+ +++TT+L Y + G +++A LF+ +V T++ ++ G K +++
Sbjct: 261 DNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVD 320
Query: 156 EAERLFYEMPE---RKDVSW-NIMMGGYGQNGQIEKALDLFRRMP--EPERNVVSWNTII 209
EA + +M DV + N +M G+ G++E+ ++F M VVS+NT+I
Sbjct: 321 EAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVI 380
Query: 210 KALVRC-GRIEDAQWHFNQMQERERDVSSWT 239
KAL + + F++M+ S +T
Sbjct: 381 KALFESKAHVSEVSSWFDKMKADSVSPSEFT 411
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 108/247 (43%), Gaps = 31/247 (12%)
Query: 26 GYPFLRTRLASTFSLNTEMKRCN---------SFISRLCKEGRTDHARKVFDQMPER--- 73
G F ++ L EMKR I L K GR D A + M
Sbjct: 276 GIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLT 335
Query: 74 -DMRLWDTMINGYIKCGMIKEARKLFDQMA----ERDTRLWTTMLNGYIEC-GMIKEARK 127
D+ + ++N K G ++E +F +M + T++ E + E
Sbjct: 336 PDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSS 395
Query: 128 LFDGPDAEKSVS----TWSTMVNGYVKINQIEEAERLFYEMPERK----DVSWNIMMGGY 179
FD A+ SVS T+S +++GY K N++E+A L EM E+ ++ ++
Sbjct: 396 WFDKMKAD-SVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINAL 454
Query: 180 GQNGQIEKALDLFRRMPEPERNVVS--WNTIIKALVRCGRIEDAQWHFNQMQERER--DV 235
G+ + E A +LF+ + E NV S + +IK +CG++ +A FN+M+ + DV
Sbjct: 455 GKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDV 514
Query: 236 SSWTTIV 242
++ ++
Sbjct: 515 YAYNALM 521
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 22/181 (12%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
K G A KVF+ + R++ W +MI GY+K + +E LF++M E + + N
Sbjct: 188 KCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENN-----VLGNE 242
Query: 116 YIECGMIKEARKL--------FDGPDAEKSVSTWSTMVNG----YVKINQIEEAERLFYE 163
Y +I KL F G + + S +V YVK I A R+F E
Sbjct: 243 YTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNE 302
Query: 164 MPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP--EPERNVVSWNTIIKALVRCGRIEDA 221
V W M+ GY NG + +AL LF++M E + N V TI L CG IE+
Sbjct: 303 HSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCV---TIASVLSGCGLIENL 359
Query: 222 Q 222
+
Sbjct: 360 E 360
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 103/212 (48%), Gaps = 14/212 (6%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM-AERDT 106
N+ + K + A+ VF+ E+D+ W+++I+G+ + G I EA LF +M +E T
Sbjct: 381 NALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVT 440
Query: 107 RLWTTMLNGYIEC--------GMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAE 158
T+ + + C G A + G A SV + +++ Y K + A
Sbjct: 441 PNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSAR 500
Query: 159 RLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIKALVRCG 216
+F + E+ ++W+ M+GGYG+ G +L+LF M + ++ N ++ +I+ A G
Sbjct: 501 LIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTG 560
Query: 217 RIEDAQWHFNQMQERERDVSS---WTTIVDCL 245
+ + + +F+ M + S +T +VD L
Sbjct: 561 MVNEGKKYFSSMYKDYNFTPSTKHYTCMVDML 592
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 18/190 (9%)
Query: 43 EMKRC--NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQ 100
E+ C S + K G +AR+VF++ D+ +W MI GY G + EA LF +
Sbjct: 274 ELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQK 333
Query: 101 MAERDTR----LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWST-----MVNGYVKI 151
M + + ++L+G CG+I+ V W T +V+ Y K
Sbjct: 334 MKGVEIKPNCVTIASVLSG---CGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKC 390
Query: 152 NQIEEAERLFYEMPERKD-VSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTI 208
Q +A+ +F EM KD V+WN ++ G+ QNG I +AL LF RM N V+ ++
Sbjct: 391 YQNRDAKYVF-EMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASL 449
Query: 209 IKALVRCGRI 218
A G +
Sbjct: 450 FSACASLGSL 459
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 14/198 (7%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR----LWTTML 113
G T AR VFDQ+PE D LW M+ Y E KL+D + + R +++ L
Sbjct: 90 GYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKAL 149
Query: 114 NGYIECGMIKEARK----LFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKD 169
E + +K L P + V T +++ Y K +I+ A ++F ++ R
Sbjct: 150 KACTELQDLDNGKKIHCQLVKVPSFDNVVLT--GLLDMYAKCGEIKSAHKVFNDITLRNV 207
Query: 170 VSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIKALVRCGRIEDAQWHFNQ 227
V W M+ GY +N E+ L LF RM E N ++ T+I A + + +W
Sbjct: 208 VCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGC 267
Query: 228 MQERERDVSSW--TTIVD 243
+ + ++SS T+++D
Sbjct: 268 LVKSGIELSSCLVTSLLD 285
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 100/218 (45%), Gaps = 15/218 (6%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
+H Y LAS+ + + + K G AR +FD + E++ W MI
Sbjct: 465 LHAYSVKLGFLASS-----SVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIG 519
Query: 84 GYIKCGMIKEARKLFDQMAERDTR----LWTTMLNGYIECGMIKEARKLFDG--PDAEKS 137
GY K G + +LF++M ++ + +T++L+ GM+ E +K F D +
Sbjct: 520 GYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFT 579
Query: 138 VST--WSTMVNGYVKINQIEEAERLFYEMPERKDV-SWNIMMGGYGQNGQIEKALDLFRR 194
ST ++ MV+ + ++E+A + +MP + DV + + G G + + + + ++
Sbjct: 580 PSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKK 639
Query: 195 MPEPERNVVSWNTIIKALVRC-GRIEDAQWHFNQMQER 231
M + + S+ ++ L GR A+ N M++R
Sbjct: 640 MLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQR 677
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 87/168 (51%), Gaps = 15/168 (8%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF---- 129
D+ + + +++ YIK G + A LFD+M +RD+ W TM++GY CG +++A LF
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93
Query: 130 -DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGG-----YGQNG 183
G D + ++S ++ G + + + E++ + + + N+ +G Y +
Sbjct: 94 RSGSDVDG--YSFSRLLKGIASVKRFDLGEQV-HGLVIKGGYECNVYVGSSLVDMYAKCE 150
Query: 184 QIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER 231
++E A + F+ + EP N VSWN +I V+ I+ A W M+ +
Sbjct: 151 RVEDAFEAFKEISEP--NSVSWNALIAGFVQVRDIKTAFWLLGLMEMK 196
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 102/240 (42%), Gaps = 46/240 (19%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM----AE 103
N + K G +A +FD+MP+RD W+TMI+GY CG +++A LF M ++
Sbjct: 39 NRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSD 98
Query: 104 RDTRLWTTMLNGYIEC---GMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERL 160
D ++ +L G + ++ L E +V S++V+ Y K ++E+A
Sbjct: 99 VDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEA 158
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKAL--------------------DLFRRMPEP-- 198
F E+ E VSWN ++ G+ Q I+ A L + +P
Sbjct: 159 FKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMF 218
Query: 199 ----------------ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+ + N +I + CG + DA+ F+ + +D+ SW +++
Sbjct: 219 CNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLG-GSKDLISWNSMI 277
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 105/257 (40%), Gaps = 58/257 (22%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMP-ERDMRLWDTMINGYIKCGMIKEARK 96
L E+ CN+ IS G A++VFD + +D+ W++MI G+ K + + A +
Sbjct: 232 LGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFE 291
Query: 97 LFDQM----AERDTRLWTTMLNGYIECGMIKEARKLFDGP--------DAEKSVSTWSTM 144
LF QM E D +T +L+ C E ++F E+ S + +
Sbjct: 292 LFIQMQRHWVETDIYTYTGLLSA---CS--GEEHQIFGKSLHGMVIKKGLEQVTSATNAL 346
Query: 145 VNGYVKI--NQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNV 202
++ Y++ +E+A LF + + +SWN ++ G+ Q G E A+ F + E V
Sbjct: 347 ISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKV 406
Query: 203 ---------------------------------VSWNTIIKALV----RCGRIEDAQWHF 225
VS +I +L+ +CG IE A+ F
Sbjct: 407 DDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCF 466
Query: 226 NQMQERERDVSSWTTIV 242
Q+ + V +W ++
Sbjct: 467 QQISSKHSTV-AWNAMI 482
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 88/182 (48%), Gaps = 10/182 (5%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL----WTTML 113
G + A +F+ + +D+ W+++I G+ + G+ ++A K F + + ++ ++ +L
Sbjct: 356 GTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALL 415
Query: 114 NGYIECGMIKEARKLFDGPDAEKSVS---TWSTMVNGYVKINQIEEAERLFYEMPERKD- 169
+ ++ +++ VS S+++ Y K IE A + F ++ +
Sbjct: 416 RSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHST 475
Query: 170 VSWNIMMGGYGQNGQIEKALDLFRRMPEPERNV--VSWNTIIKALVRCGRIEDAQWHFNQ 227
V+WN M+ GY Q+G + +LDLF +M + V++ I+ A G I++ N
Sbjct: 476 VAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNL 535
Query: 228 MQ 229
M+
Sbjct: 536 ME 537
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 86/202 (42%), Gaps = 44/202 (21%)
Query: 80 TMINGYIKCGMIKEAR-KLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSV 138
T+++ + C ++K+ K+ + + + M++ Y +CG + +A+++FDG K +
Sbjct: 211 TLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDL 270
Query: 139 STWSTMVNGYVKINQIEEAERLFYEMP--------------------------------- 165
+W++M+ G+ K E A LF +M
Sbjct: 271 ISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGM 330
Query: 166 ------ERKDVSWNIMMGGYGQ--NGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGR 217
E+ + N ++ Y Q G +E AL LF + ++++SWN+II + G
Sbjct: 331 VIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESL--KSKDLISWNSIITGFAQKGL 388
Query: 218 IEDAQWHFNQMQERERDVSSWT 239
EDA F+ ++ E V +
Sbjct: 389 SEDAVKFFSYLRSSEIKVDDYA 410
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 102/239 (42%), Gaps = 75/239 (31%)
Query: 80 TMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD--GPDAEK- 136
++++ Y KCG+I EAR++F+ + +RD LW +++ Y+ GMI EA L G D +
Sbjct: 182 SLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRF 241
Query: 137 ---------------------------------SVSTWSTMVNGYVKINQIEEAERLFYE 163
+ + ++N Y K N + +A F
Sbjct: 242 RGDYFTFSSLLSACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFES 301
Query: 164 MPERKDVSWNIMMGGYGQNGQIEKALDLFRRM----PEPER----NVVS--------W-- 205
M R VSWN M+ G+ QNG+ +A+ LF +M +P+ +V+S W
Sbjct: 302 MVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEI 361
Query: 206 -------------------NTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
N++I + R G + +A F+ + RE D+ SWT+++ L
Sbjct: 362 KQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSI--REPDLVSWTSVIGAL 418
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 93/183 (50%), Gaps = 10/183 (5%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
++G+ HA +F + D+ + ++N Y K + +AR+ F+ M R+ W M+ G
Sbjct: 258 EQGKQIHA-ILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVG 316
Query: 116 YIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSW 172
+ + G +EA +LF + + T++++++ K + I E +++ + ++ +
Sbjct: 317 FAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADF 376
Query: 173 ----NIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
N ++ Y +NG + +AL F + EP+ +VSW ++I AL G E++ F M
Sbjct: 377 LSVANSLISSYSRNGNLSEALLCFHSIREPD--LVSWTSVIGALASHGFAEESLQMFESM 434
Query: 229 QER 231
++
Sbjct: 435 LQK 437
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 99/208 (47%), Gaps = 11/208 (5%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM----AER 104
+ ++ K AR+ F+ M R++ W+ MI G+ + G +EA +LF QM +
Sbjct: 281 ALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQP 340
Query: 105 DTRLWTTMLNGYIECGM---IKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLF 161
D + ++L+ + IK+ + + + +S +++++ Y + + EA F
Sbjct: 341 DELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCF 400
Query: 162 YEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP-ERNVVSWNTIIKALVRCGRIED 220
+ + E VSW ++G +G E++L +F M + + + +++ ++ A G +++
Sbjct: 401 HSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQPDKITFLEVLSACSHGGLVQE 460
Query: 221 AQWHFNQMQER---ERDVSSWTTIVDCL 245
F +M E E + +T ++D L
Sbjct: 461 GLRCFKRMTEFYKIEAEDEHYTCLIDLL 488
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 28/182 (15%)
Query: 61 DHARKVFDQMPERDMRLWDTMINGYIK----------CGMIKEARKLFDQMAERDTRLW- 109
D A K+FD+MP R++ W+ +I+G I+ G +R LF ++
Sbjct: 88 DDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMG 147
Query: 110 --------TTMLNGY-IECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERL 160
T M G + C M+K+ E S +++V+ Y K I EA R+
Sbjct: 148 LIRLCTDSTNMKAGIQLHCLMVKQG--------LESSCFPSTSLVHFYGKCGLIVEARRV 199
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIED 220
F + +R V WN ++ Y NG I++A L + M + +L+ RIE
Sbjct: 200 FEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQ 259
Query: 221 AQ 222
+
Sbjct: 260 GK 261
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 104/199 (52%), Gaps = 19/199 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ I RLCK+G HA+ +F +M ++ D+ + MI+ + + G +A +L M E
Sbjct: 80 NAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIE 139
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSV----STWSTMVNGYVKINQIE 155
R D ++ ++N ++ G + EA +++ G + + T+++M++G+ K +++
Sbjct: 140 RQINPDVVTFSALINALVKEGKVSEAEEIY-GDMLRRGIFPTTITYNSMIDGFCKQDRLN 198
Query: 156 EAERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTII 209
+A+R+ M + V+++ ++ GY + +++ +++F M N V++ T+I
Sbjct: 199 DAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 258
Query: 210 KALVRCGRIEDAQWHFNQM 228
+ G ++ AQ N M
Sbjct: 259 HGFCQVGDLDAAQDLLNVM 277
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 104/216 (48%), Gaps = 27/216 (12%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL 108
+ ++ LC EGR A + D+M E + + T+ING K G + A L +M E +
Sbjct: 15 TLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKA 74
Query: 109 WTTMLNGYIE--C--GMIKEARKLFDG-------PDAEKSVSTWSTMVNGYVKINQIEEA 157
+ N I+ C G A+ LF PD V T+S M++ + + + +A
Sbjct: 75 HVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPD----VITYSGMIDSFCRSGRWTDA 130
Query: 158 ERLFYEMPERK----DVSWNIMMGGYGQNGQIEKA----LDLFRRMPEPERNVVSWNTII 209
E+L +M ER+ V+++ ++ + G++ +A D+ RR P +++N++I
Sbjct: 131 EQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFP--TTITYNSMI 188
Query: 210 KALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVD 243
+ R+ DA+ + M + DV +++T+++
Sbjct: 189 DGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLIN 224
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 84/167 (50%), Gaps = 9/167 (5%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF---D 130
D+ + T++NG G + +A L D+M E + + T++NG + G + A L +
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKME 68
Query: 131 GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIE 186
+ V ++ +++ K A+ LF EM ++ ++++ M+ + ++G+
Sbjct: 69 ETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWT 128
Query: 187 KALDLFRRMPEPERN--VVSWNTIIKALVRCGRIEDAQWHFNQMQER 231
A L R M E + N VV+++ +I ALV+ G++ +A+ + M R
Sbjct: 129 DAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 108/203 (53%), Gaps = 16/203 (7%)
Query: 57 EGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM----AERDTRLWTTM 112
G ++A KVF++MPER++ W MI+G+ + + KL+ +M ++ + +T +
Sbjct: 168 SGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTAL 227
Query: 113 LNGYIECGMIKEARK-----LFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
L+ G + + R L G + +S +++++ Y K +++A R+F + +
Sbjct: 228 LSACTGSGALGQGRSVHCQTLHMGLKSYLHIS--NSLISMYCKCGDLKDAFRIFDQFSNK 285
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFR-RMPEP--ERNVVSWNTIIKALVRCGRIEDAQWH 224
VSWN M+ GY Q+G +A++LF MP+ + + +++ ++ + G +++ +
Sbjct: 286 DVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKF 345
Query: 225 FNQMQER--ERDVSSWTTIVDCL 245
FN M E + +++ ++ +VD L
Sbjct: 346 FNLMAEHGLKPELNHYSCLVDLL 368
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 73/146 (50%), Gaps = 9/146 (6%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
L + + NS IS CK G A ++FDQ +D+ W++MI GY + G+ +A +LF+
Sbjct: 252 LKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFE 311
Query: 100 QMAER-----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKI 151
M + D + +L+ G++KE RK F+ + ++ +S +V+ +
Sbjct: 312 LMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRF 371
Query: 152 NQIEEAERLFYEMPERKD-VSWNIMM 176
++EA L MP + + V W ++
Sbjct: 372 GLLQEALELIENMPMKPNSVIWGSLL 397
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 85/165 (51%), Gaps = 18/165 (10%)
Query: 57 EGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGY 116
+GR+ H + + + + + +++I+ Y KCG +K+A ++FDQ + +D W +M+ GY
Sbjct: 239 QGRSVHCQTLHMGLKSY-LHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGY 297
Query: 117 IECGMIKEARKLFD--------GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER- 167
+ G+ +A +LF+ PDA T+ +++ ++E + F M E
Sbjct: 298 AQHGLAMQAIELFELMMPKSGTKPDA----ITYLGVLSSCRHAGLVKEGRKFFNLMAEHG 353
Query: 168 ---KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTII 209
+ ++ ++ G+ G +++AL+L MP +V+ W +++
Sbjct: 354 LKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVI-WGSLL 397
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 117/252 (46%), Gaps = 54/252 (21%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
+S IS LC GR A ++ M E+ ++ ++ +I+ ++K G EA KL D M +
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
R D + +++NG+ + +A+++F+ D + T++T++ G+ K ++E+
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343
Query: 157 AERLFYEMPERKDV---------------------------------------SWNIMMG 177
LF EM R V +++I++
Sbjct: 344 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 403
Query: 178 GYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIKALVRCGRIEDAQWHFNQMQER--ER 233
G NG++EKAL++F M + E ++ + T+I+ + + G+++D F + + +
Sbjct: 404 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 463
Query: 234 DVSSWTTIVDCL 245
+V ++ T++ L
Sbjct: 464 NVVTYNTMISGL 475
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 117/228 (51%), Gaps = 29/228 (12%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERD----MRLWDTMINGYIKCGMIKEA 94
S++ ++ NS I+ C R D A+++F+ M +D + ++T+I G+ K +++
Sbjct: 285 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 344
Query: 95 RKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLF-----DG--PDAEKSVSTWST 143
+LF +M+ R DT +TT++ G G A+K+F DG PD + T+S
Sbjct: 345 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD----IMTYSI 400
Query: 144 MVNGYVKINQIEEAERLFYEMPERKDVSWNI-----MMGGYGQNGQIEKALDLF--RRMP 196
+++G ++E+A +F M ++ ++ +I M+ G + G+++ DLF +
Sbjct: 401 LLDGLCNNGKLEKALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 459
Query: 197 EPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE--RDVSSWTTIV 242
+ NVV++NT+I L +++A +M+E D ++ T++
Sbjct: 460 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 121/251 (48%), Gaps = 29/251 (11%)
Query: 23 LIHGYPFLRTRLASTFSLNTEM--KRC-------NSFISRLCKEGRTDHARKVFDQMP-- 71
LIHG FL + + +L M + C ++ LCK G D A + ++M
Sbjct: 121 LIHGL-FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Query: 72 --ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIEC----GMIKEA 125
E D+ +++T+I+ K + +A LF +M + R + I C G +A
Sbjct: 180 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 239
Query: 126 RKLFDGPDAEK---SVSTWSTMVNGYVKINQIEEAERLFYEMPERK---DV-SWNIMMGG 178
+L +K ++ T++ +++ +VK + EAE+L +M +R D+ ++N ++ G
Sbjct: 240 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 299
Query: 179 YGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIKALVRCGRIEDAQWHFNQMQERER--D 234
+ + +++KA +F M + ++ ++NT+IK + R+ED F +M R D
Sbjct: 300 FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 359
Query: 235 VSSWTTIVDCL 245
++TT++ L
Sbjct: 360 TVTYTTLIQGL 370
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 109/218 (50%), Gaps = 21/218 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ I LCK D A +F +M + +R + ++I+ G +A +L M E
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDGP---DAEKSVSTWSTMVNGYVKINQIEE 156
+ + + +++ +++ G EA KL D + + T+++++NG+ +++++
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308
Query: 157 AERLFYEMPERKDV-----SWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTII 209
A+++F E KD ++N ++ G+ ++ ++E +LFR M + V++ T+I
Sbjct: 309 AKQMF-EFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 210 KALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
+ L G ++AQ F QM D+ +++ ++D L
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 104/221 (47%), Gaps = 27/221 (12%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFDQMA- 102
N +S + K + D + ++M ++ ++ +IN + + I A L +M
Sbjct: 14 NKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 73
Query: 103 ---ERDTRLWTTMLNGYIECGMIKEARKLFDG-------PDAEKSVSTWSTMVNGYVKIN 152
E +++LNGY I +A L D PD T++T+++G N
Sbjct: 74 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT----ITFTTLIHGLFLHN 129
Query: 153 QIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWN 206
+ EA L M +R V++ +++ G + G I+ A +L +M + E +VV +N
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 207 TIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
TII +L + ++DA F +M+ + +V ++++++ CL
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 230
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 81/162 (50%), Gaps = 15/162 (9%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
+ I L +G D+A+KVF QM D+ + +++G G +++A ++FD M +
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 424
Query: 105 DTRL----WTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIEEA 157
+ +L +TTM+ G + G + + LF + +V T++TM++G ++EA
Sbjct: 425 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 484
Query: 158 ERLFYEMPERKDV----SWNIMMGGYGQNGQIEKALDLFRRM 195
L +M E + ++N ++ + ++G + +L R M
Sbjct: 485 YALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 104/220 (47%), Gaps = 14/220 (6%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF- 98
+T++ CN I K + + +F +M ++ W +++ Y++ ++A L+
Sbjct: 240 FDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYL 299
Query: 99 ---DQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPD---AEKSVSTWSTMVNGYVKIN 152
+ E + +++L+ ++ R + E+++ S +V+ Y K
Sbjct: 300 RSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCG 359
Query: 153 QIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE----PERNVVSWNTI 208
IE++E+ F EMPE+ V+ N ++GGY GQ++ AL LF M P N +++ ++
Sbjct: 360 CIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSL 419
Query: 209 IKALVRCGRIEDAQWHFNQMQER---ERDVSSWTTIVDCL 245
+ A R G +E+ F+ M+ E ++ IVD L
Sbjct: 420 LSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDML 459
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 49/231 (21%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERD- 105
C++F CK D ARK+FD++PER++ W+ I+ + G +EA + F + D
Sbjct: 147 CSAF-DMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDG 205
Query: 106 ---TRLWTTMLNG-----YIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEA 157
+ + LN ++ GM L G D + VS + +++ Y K QI +
Sbjct: 206 HPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTD--VSVCNGLIDFYGKCKQIRSS 263
Query: 158 ERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP------------------- 198
E +F EM + VSW ++ Y QN + EKA L+ R +
Sbjct: 264 EIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGM 323
Query: 199 ------------------ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER 231
ER + + ++ +CG IED++ F++M E+
Sbjct: 324 AGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK 374
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 85/182 (46%), Gaps = 17/182 (9%)
Query: 29 FLRTRL----ASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMING 84
+LR+R S F +++ + C + GR+ HA V ER + + +++
Sbjct: 298 YLRSRKDIVETSDFMISSVLSACAGMAG--LELGRSIHAHAV-KACVERTIFVGSALVDM 354
Query: 85 YIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD-----GPDAEKSVS 139
Y KCG I+++ + FD+M E++ +++ GY G + A LF+ G +
Sbjct: 355 YGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYM 414
Query: 140 TWSTMVNGYVKINQIEEAERLFYEMPERKDVS-----WNIMMGGYGQNGQIEKALDLFRR 194
T+ ++++ + +E ++F M + ++ ++ G+ G +E+A + ++
Sbjct: 415 TFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKK 474
Query: 195 MP 196
MP
Sbjct: 475 MP 476
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 107/254 (42%), Gaps = 45/254 (17%)
Query: 37 TFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARK 96
F ++ + I G ARK+FD+M +D+ +W+ ++ GY K G + EAR
Sbjct: 144 VFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARS 203
Query: 97 LFDQMA--ERDTRLWTTMLNGYIECGMIKEARKLF------------------------- 129
L + M R+ WT +++GY + G EA ++F
Sbjct: 204 LLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADL 263
Query: 130 -------------DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMM 176
D ++VS + +++ Y K I +A +F + ER V+W ++
Sbjct: 264 GSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTII 323
Query: 177 GGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER--- 231
G +G +AL +F RM + N V++ I+ A G ++ + FN M+ +
Sbjct: 324 AGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGI 383
Query: 232 ERDVSSWTTIVDCL 245
++ + ++D L
Sbjct: 384 HPNIEHYGCMIDLL 397
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 18/221 (8%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCN----SFISRLCKEGRTDHARKVFDQMPERDMRLWD 79
IHG + + + + T + R N FI G +A VF P + L +
Sbjct: 23 IHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHN 82
Query: 80 TMINGY-------IKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD-- 130
TMI I RKL+ A+ DT + +L + + R++
Sbjct: 83 TMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQV 142
Query: 131 ---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEK 187
G D+ SV + ++ Y + +A ++F EM + WN ++ GYG+ G++++
Sbjct: 143 VVFGFDS--SVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDE 200
Query: 188 ALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
A L MP RN VSW +I + GR +A F +M
Sbjct: 201 ARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRM 241
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 105/218 (48%), Gaps = 12/218 (5%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF 98
SL+ + NS I K G A ++F + + ++ W+ MI Y+ C ++A LF
Sbjct: 463 SLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALF 521
Query: 99 DQMAERDTR----LWTTMLNGYIECGMIKEAR---KLFDGPDAEKSVSTWSTMVNGYVKI 151
D+M + + T+L + G ++ + + + E ++S + +++ Y K
Sbjct: 522 DRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKC 581
Query: 152 NQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVV--SWNTII 209
+E++ LF ++ V WN+M+ GYG +G +E A+ LF +M E + ++ ++
Sbjct: 582 GHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALL 641
Query: 210 KALVRCGRIEDAQWHFNQMQERER--DVSSWTTIVDCL 245
A G +E + F +M + + ++ ++ +VD L
Sbjct: 642 SACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLL 679
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR- 107
+ I K G + +R++FD ++D W+ MI+GY G ++ A LFDQM E D +
Sbjct: 573 ALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKP 632
Query: 108 ---LWTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKINQIEEAERLF 161
+ +L+ G++++ +KLF D + ++ +S +V+ + +EEAE
Sbjct: 633 TGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTV 692
Query: 162 YEMPERKD-VSWNIMMGGYGQNGQIEKALDLFRR 194
MP D V W ++ +G+ E + + R
Sbjct: 693 MSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAER 726
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER-DMRLWDTMINGY--IKCGM--IK 92
FSL++ + CNS +S CK A K+F ++ E + W+TM+ GY +KC + I+
Sbjct: 362 FSLDSTV--CNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIE 419
Query: 93 EARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKL---FDGPDAEKSVSTWSTMVNGYV 149
RK+ + E D+ T++++ G + + L + ++S +++++ Y
Sbjct: 420 LFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYG 479
Query: 150 KINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNT 207
K+ + A R+F E + ++WN M+ Y Q EKA+ LF RM + + ++ T
Sbjct: 480 KMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVT 538
Query: 208 IIKALVRCGRIEDAQWHFNQMQERERDV 235
++ A V G +E Q + E E ++
Sbjct: 539 LLMACVNTGSLERGQMIHRYITETEHEM 566
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 18/172 (10%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEAR----KLFDQMAER 104
SF+ K G A VFD+MP+RD+ W +I+G+++ G + K+ ++
Sbjct: 166 SFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDV 225
Query: 105 DTRLWTTMLNGYIEC---GMIKEARKLF-----DGPDAEKSVSTWSTMVNGYVKINQIEE 156
D T+ G+ C G +KE R L +G + K V S+M + Y K E
Sbjct: 226 DKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQ--SSMFSFYSKSGNPSE 283
Query: 157 AERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP----EPERNVVS 204
A F E+ + SW ++ ++G +E++ D+F M P+ V+S
Sbjct: 284 AYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVIS 335
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 23/208 (11%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
+HG+ ++ LAS+ + + M SF S K G A F ++ + DM W ++I
Sbjct: 252 LHGFA-VKNGLASSKFVQSSMF---SFYS---KSGNPSEAYLSFRELGDEDMFSWTSIIA 304
Query: 84 GYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIECG--MIKEARKLFDGPDAEKS 137
+ G ++E+ +F +M + D + + ++N E G M+ K F G
Sbjct: 305 SLARSGDMEESFDMFWEMQNKGMHPDGVVISCLIN---ELGKMMLVPQGKAFHGFVIRHC 361
Query: 138 VSTWSTMVNG----YVKINQIEEAERLFYEMPERKDV-SWNIMMGGYGQNGQIEKALDLF 192
S ST+ N Y K + AE+LF + E + +WN M+ GYG+ K ++LF
Sbjct: 362 FSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELF 421
Query: 193 RRMPE--PERNVVSWNTIIKALVRCGRI 218
R++ E + S ++I + G +
Sbjct: 422 RKIQNLGIEIDSASATSVISSCSHIGAV 449
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 97/196 (49%), Gaps = 14/196 (7%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMA 102
C + I C+ G+T A K+ + + D+ ++ MI+GY K G I A + D+M+
Sbjct: 140 CTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS 199
Query: 103 -ERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAE 158
D + T+L + G +K+A ++ D D V T++ ++ + + + A
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 159 RLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKAL 212
+L EM +R V++N+++ G + G++++A+ MP + NV++ N I++++
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 213 VRCGRIEDAQWHFNQM 228
GR DA+ M
Sbjct: 320 CSTGRWMDAEKLLADM 335
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 119/264 (45%), Gaps = 58/264 (21%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERD----MRLWDTMINGYIKCGMIKE 93
S++ ++ N+ + LC G+ A +V D+M +RD + + +I + +
Sbjct: 198 MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257
Query: 94 ARKLFDQMAER----DTRLWTTMLNGYIECGMIKEARK-LFDGP---------------- 132
A KL D+M +R D + ++NG + G + EA K L D P
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 133 ---------DAEK------------SVSTWSTMVNGYVKINQIEEAERLFYEMPER---- 167
DAEK SV T++ ++N + + A + +MP+
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPE----PERNVVSWNTIIKALVRCGRIEDAQW 223
+S+N ++ G+ + ++++A++ RM P+ +V++NT++ AL + G++EDA
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD--IVTYNTMLTALCKDGKVEDAVE 435
Query: 224 HFNQMQERERD--VSSWTTIVDCL 245
NQ+ + + ++ T++D L
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGL 459
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 92/194 (47%), Gaps = 44/194 (22%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERD----MRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ ++ LCK+G+ + A ++ +Q+ + + ++T+I+G K G +A KL D+M
Sbjct: 418 NTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 477
Query: 104 RDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYE 163
+D + PD T+S++V G + +++EA + F+E
Sbjct: 478 KDLK------------------------PDT----ITYSSLVGGLSREGKVDEAIKFFHE 509
Query: 164 MPER-----KDVSWNIMMGGYGQNGQIEKALD----LFRRMPEPERNVVSWNTIIKALVR 214
ER V++N +M G ++ Q ++A+D + R +P N S+ +I+ L
Sbjct: 510 F-ERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKP--NETSYTILIEGLAY 566
Query: 215 CGRIEDAQWHFNQM 228
G ++A N++
Sbjct: 567 EGMAKEALELLNEL 580
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 65/109 (59%), Gaps = 9/109 (8%)
Query: 142 STMVNGYVKINQIEEAERLFYEMPERKD-----VSWNIMMGGYGQNGQIEKALDLFRRMP 196
+T++ G+ ++ + +A ++ E+ E +++N+M+ GY + G+I AL + RM
Sbjct: 141 TTLIRGFCRLGKTRKAAKIL-EILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM- 198
Query: 197 EPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE--RDVSSWTTIVD 243
+VV++NTI+++L G+++ A ++M +R+ DV ++T +++
Sbjct: 199 SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIE 247
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 109/214 (50%), Gaps = 21/214 (9%)
Query: 49 SFISRLCKEGRTDHARKVFDQM----PERDMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
+ I LCK G+ + A +F+++ E D L+ T+I+G + G + A + M +R
Sbjct: 317 AIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQR 376
Query: 105 DTR----LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIE---EA 157
+ + T++NG G + EA ++ G + V T+ST+++ Y+K+ I+ E
Sbjct: 377 GIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGD--VITYSTLLDSYIKVQNIDAVLEI 434
Query: 158 ERLFYEMPERKD-VSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIKALVR 214
R F E D V NI++ + G +A L+R MPE + + ++ T+IK +
Sbjct: 435 RRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCK 494
Query: 215 CGRIEDAQWHFNQMQERERDVSS---WTTIVDCL 245
G+IE+A FN++ R+ VS+ + I+D L
Sbjct: 495 TGQIEEALEMFNEL--RKSSVSAAVCYNRIIDAL 526
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 125/274 (45%), Gaps = 41/274 (14%)
Query: 10 FILMHAHKLNTHP-------LIHGYPF-----------LRTRLASTFSLNTEMKRCNSFI 51
FI +H K + P LIHG+ LR L + + + + C S I
Sbjct: 83 FINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFC-SLI 141
Query: 52 SRLCKEGRTDHARKVFDQMPERDMR------LWDTMINGYIKCGMIKEARKLFDQMAERD 105
R ++G D+A +V + M +++ + +I+G+ K G + A F+ +
Sbjct: 142 YRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSG 201
Query: 106 TRL-----WTTMLNGYIECGMIKEARKL---FDGPDAEKSVSTWSTMVNGYVKINQIEEA 157
+ +TT+++ + G + E R L + E +S ++GY K + +A
Sbjct: 202 VLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDA 261
Query: 158 ERLFYEMPE----RKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKA 211
EM E R VS++I++ G + G +E+AL L +M + E N++++ II+
Sbjct: 262 LMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRG 321
Query: 212 LVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVD 243
L + G++E+A FN++ E D + T++D
Sbjct: 322 LCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLID 355
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 25/181 (13%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAE 103
NS I+ LC++G A ++FD + + + +I+ K G+ +A KL D M
Sbjct: 694 NSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVS 753
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTMVNGYVKIN 152
+ + ++ ++++GY + G ++A ++ PDA T S+M+ GY K
Sbjct: 754 KGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDA----FTVSSMIKGYCKKG 809
Query: 153 QIEEAERLFYEMPERKDVSWN-----IMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNT 207
+EEA +F E + K++S + ++ G+ G++E+A L R M E V N
Sbjct: 810 DMEEALSVFTEFKD-KNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINR 868
Query: 208 I 208
+
Sbjct: 869 V 869
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 51 ISRLCKEGRTDHARKVFDQMPERDMRL----WDTMINGYIKCGMIKEARKLFDQMAE--- 103
I+ LCKEG A + R + L ++++ING + G + EA +LFD +
Sbjct: 662 INGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGL 721
Query: 104 -RDTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNGYVKINQIEEAER 159
+ +++ + G+ +A KL D ++ ++ ++++V+GY K+ Q E+A R
Sbjct: 722 VPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMR 781
Query: 160 LFYE------MPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKA 211
+ P+ VS M+ GY + G +E+AL +F + + + +IK
Sbjct: 782 VVSRKMMGRVTPDAFTVSS--MIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKG 839
Query: 212 LVRCGRIEDAQWHFNQMQERERDV 235
GR+E+A+ +M E V
Sbjct: 840 FCTKGRMEEARGLLREMLVSESVV 863
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 11/155 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEA----RKLFDQMAE 103
N+ I+ LC GR A +V + D+ + T+++ YIK I R+ +
Sbjct: 386 NTVINGLCMAGRVSEADEV-SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIP 444
Query: 104 RDTRLWTTMLNGYIECGMIKEARKLFDGP---DAEKSVSTWSTMVNGYVKINQIEEAERL 160
D + +L ++ G EA L+ D +T++TM+ GY K QIEEA +
Sbjct: 445 MDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEM 504
Query: 161 FYEMPERK---DVSWNIMMGGYGQNGQIEKALDLF 192
F E+ + V +N ++ + G ++ A ++
Sbjct: 505 FNELRKSSVSAAVCYNRIIDALCKKGMLDTATEVL 539
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 108/211 (51%), Gaps = 27/211 (12%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER---- 104
S SRL + G T D+ +++MIN Y K + +EAR L +M E
Sbjct: 246 SIFSRLKRSGITP------------DLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLP 293
Query: 105 DTRLWTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKINQIEEAERLF 161
+T ++T+L+ Y+E EA +F + ++T + M++ Y +++ ++EA+RLF
Sbjct: 294 NTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLF 353
Query: 162 YEM----PERKDVSWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIKALVRC 215
+ + E VS+N ++ YG+ +A+ LFR M + E+NVV++NT+IK +
Sbjct: 354 WSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKT 413
Query: 216 GRIEDAQWHFNQMQER--ERDVSSWTTIVDC 244
E A +MQ R E + +++TI+
Sbjct: 414 MEHEKATNLVQEMQSRGIEPNAITYSTIISI 444
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 48 NSFISRLCKEGRTDHARKVFDQM----PERDMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
++ IS K G+ D A +F ++ E D L+ TMI Y + G++ A++L ++
Sbjct: 439 STIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKL 498
Query: 104 RDTRLWTTMLNGYIECGMIKEA----RKLFDGPDAEKSVSTWSTMVN------GYVKINQ 153
D T + + G +EA R+ F+ + K +S + M+N YV + +
Sbjct: 499 PDNIPRETAITILAKAGRTEEATWVFRQAFESGEV-KDISVFGCMINLYSRNQRYVNVIE 557
Query: 154 IEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE 197
+ E R P+ ++ +++ YG+ + EKA ++R M E
Sbjct: 558 VFEKMRTAGYFPDSNVIA--MVLNAYGKQREFEKADTVYREMQE 599
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 41/222 (18%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ + K G+ D RKVFD+MP R + W TM+ G + + A +F+QM R+
Sbjct: 158 NTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVV 217
Query: 108 LWTTMLNGYIECGMIKEARKLFD-------GPD--------------AEKSVSTW----- 141
WT M+ Y++ EA +LF P+ S+ W
Sbjct: 218 SWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYA 277
Query: 142 ------------STMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKAL 189
+ +++ Y K +++A ++F M + +WN M+ G +G E+AL
Sbjct: 278 HKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEAL 337
Query: 190 DLF---RRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
LF E + +++ ++ A G ++D +F +M
Sbjct: 338 SLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRM 379
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 10/200 (5%)
Query: 50 FISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM-----AER 104
IS G T +A VF+Q+ W+ MI +EA LF M ++
Sbjct: 58 LISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQF 117
Query: 105 DTRLWTTMLNGYIECGMIK---EARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLF 161
D + ++ + I+ + L V +T+++ Y K + + ++F
Sbjct: 118 DKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVF 177
Query: 162 YEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDA 221
+MP R VSW M+ G N Q++ A +F +MP RNVVSW +I A V+ R ++A
Sbjct: 178 DKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPM--RNVVSWTAMITAYVKNRRPDEA 235
Query: 222 QWHFNQMQERERDVSSWTTI 241
F +MQ + + +T +
Sbjct: 236 FQLFRRMQVDDVKPNEFTIV 255
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 104/238 (43%), Gaps = 48/238 (20%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
L + N ++ K GR A +F +MP R+ W+ MI G+ + + A K+F+
Sbjct: 189 LKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFE 248
Query: 100 QMAER----DTRLWTTMLNGYIECGMIK------------------EARKLFDGPDAEKS 137
M D WT++L+ + +CG + EA +F AE
Sbjct: 249 WMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELE 308
Query: 138 VSTWSTMVNGYV--------------------KINQIEEAERLFYEMPERKDVSWNIMMG 177
+ + V+GYV K ++++AE LF ++ + SWN ++
Sbjct: 309 ALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLIT 368
Query: 178 GYGQNGQIEKALDLFRRMPE------PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
+ G++++AL LF + E + NVV+W ++IK GR +D+ +F QMQ
Sbjct: 369 SFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQ 426
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 97/224 (43%), Gaps = 43/224 (19%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAE---RDTRLWTTM 112
++ R HA+ + R L +I+ Y + G++ +AR +F+ ++ D RLW ++
Sbjct: 70 QQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSI 129
Query: 113 LNGYIECGMIKEARKLFDG--------------------------------------PDA 134
L + G+ + A +L+ G
Sbjct: 130 LKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGL 189
Query: 135 EKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRR 194
++++ + ++ Y K ++ +A LF EMP R +SWN+M+ G+ Q E A+ +F
Sbjct: 190 KENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEW 249
Query: 195 MPEPE--RNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVS 236
M E + V+W +++ +CG+ ED +F+ M+ VS
Sbjct: 250 MQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVS 293
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 97/249 (38%), Gaps = 51/249 (20%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAE---- 103
N+ I K+G+ A +F Q+ + + W+++I ++ G + EA LF ++ E
Sbjct: 333 NALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHV 392
Query: 104 ----RDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWST---------------- 143
+ WT+++ G G ++ + F K ++ T
Sbjct: 393 CNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNL 452
Query: 144 ----------------------MVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQ 181
+VN Y K + E +F + ++ +SWN ++ GYG
Sbjct: 453 GREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGM 512
Query: 182 NGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER---ERDVS 236
+G EKAL +F RM + ++ ++ A G +E + F M +R E
Sbjct: 513 HGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQE 572
Query: 237 SWTTIVDCL 245
+ IVD L
Sbjct: 573 HYACIVDLL 581
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 98/220 (44%), Gaps = 45/220 (20%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMP--ERDMRLWDTMINGYIKCGMIKEARKLFDQMAER- 104
N+ G A+K+FD++P E+D W T+++ + + G++ + KLF +M +
Sbjct: 47 NALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKR 106
Query: 105 --------------------------------------DTRLWTTMLNGYIECGMIKEAR 126
++ +++ Y +CG++ E +
Sbjct: 107 VEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVK 166
Query: 127 KLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIE 186
++F+ + EKSV +W+ +++ VK +E +F+EMPER V+W +M+ GY G
Sbjct: 167 RIFEELE-EKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTR 225
Query: 187 KALDLFRRMP---EPERNVVSWNTIIKALVRCGRIEDAQW 223
+ L+L M N V+ +++ A + G + +W
Sbjct: 226 EVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRW 265
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 107/226 (47%), Gaps = 18/226 (7%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE 93
+A + T +K CN+ + K G +++F+++ E+ + W +++ +K ++
Sbjct: 136 VAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLER 195
Query: 94 ARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF--------DGPDAEKSVSTWSTMV 145
R++F +M ER+ WT M+ GY+ G +E +L G + S S
Sbjct: 196 GREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACA 255
Query: 146 -NGYVKINQIEEAERLFYEMPERKDVSWNIMMGG------YGQNGQIEKALDLFRRMPEP 198
+G + + + L EM ++ S++ +M G Y + G I+ ++++FR M
Sbjct: 256 QSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLM--R 313
Query: 199 ERNVVSWNTIIKALVRCGRIEDAQWHFNQM-QERERDVSSWTTIVD 243
+RNVV+WN + L G+ F QM +E + D ++T ++
Sbjct: 314 KRNVVTWNALFSGLAMHGKGRMVIDMFPQMIREVKPDDLTFTAVLS 359
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 40/194 (20%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF---- 129
D RL + Y +CG + +R LF+ RD +W++M++GY E G E L
Sbjct: 286 DERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMR 345
Query: 130 -DGPDAEK-------SVSTWST--------------------------MVNGYVKINQIE 155
+G +A S T ST +++ Y K +
Sbjct: 346 KEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLS 405
Query: 156 EAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNV--VSWNTIIKALV 213
A +FYE+ E+ VSW+ M+ YG +G +AL++F+ M + V +++ I+ A
Sbjct: 406 AAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACN 465
Query: 214 RCGRIEDAQWHFNQ 227
G +E+AQ F Q
Sbjct: 466 HAGLVEEAQTIFTQ 479
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERD-- 105
NS IS K R RKVFD+M RD + ++IN + G++ EA KL +M
Sbjct: 86 NSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFI 145
Query: 106 --TRLWTTMLNGYIECGMIKEARKLFDG-----PDAEKSVSTWSTMVNGYVKINQIEEAE 158
+ L ++L G + ++F ++SV + +V+ Y+K + A
Sbjct: 146 PKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAF 205
Query: 159 RLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
+F +M + +VSW M+ G N E +DLFR M
Sbjct: 206 HVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAM 242
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 77 LWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG---PD 133
L + +I+ Y KCG + AR++F ++ E+D W++M+N Y G EA ++F G
Sbjct: 390 LGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGG 449
Query: 134 AEKSVSTWSTMVNGYVKINQIEEAERLF-----YEMP---ERKDVSWNIMMGGYGQNGQI 185
E + +++ +EEA+ +F Y MP E N++ G+ G+I
Sbjct: 450 HEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLL----GRFGKI 505
Query: 186 EKALDLFRRMP-EPERNVVSWNTIIKALVRCGRIEDA-QWHFNQMQERERD 234
+ A ++ MP +P + W++++ A GR++ A + N++ + E D
Sbjct: 506 DDAFEVTINMPMKPSARI--WSSLLSACETHGRLDVAGKIIANELMKSEPD 554
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 79/174 (45%), Gaps = 13/174 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA----E 103
N+ I K G AR+VF ++ E+D+ W +MIN Y G EA ++F M E
Sbjct: 392 NALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHE 451
Query: 104 RDTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNGYVKINQIEEAERL 160
D + +L+ G+++EA+ +F ++ ++ +N + +I++A +
Sbjct: 452 VDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEV 511
Query: 161 FYEMPERKDVS-WNIMMGGYGQNGQIEKAL-----DLFRRMPEPERNVVSWNTI 208
MP + W+ ++ +G+++ A +L + P+ N V + I
Sbjct: 512 TINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKI 565
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 99/236 (41%), Gaps = 50/236 (21%)
Query: 60 TDHARK--VFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFDQMA-ERDTRLWTTM 112
+D+AR V+ Q+ + + + +IN + KC + A LFD+ E+ T W M
Sbjct: 516 SDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIM 575
Query: 113 LNGYIECGMIKEARKLFDGPDAEK------------------------------------ 136
+NGY+ G +EA F EK
Sbjct: 576 MNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGF 635
Query: 137 --SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRR 194
+++V+ Y K IE +E+ F E+ + VSWN M+ Y +G A+ LF
Sbjct: 636 CSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLS 695
Query: 195 MPEPER--NVVSWNTIIKALVRCGRIEDAQWHFNQMQER---ERDVSSWTTIVDCL 245
M E E + VS+ +++ A G +E+ + F +M ER E +V + +VD L
Sbjct: 696 MQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLL 751
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 14/184 (7%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
+ +E++ + IS K GR A K F+++P +D ++ + GY + G +A ++
Sbjct: 432 IESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYK 491
Query: 100 QMAER----DTRLWTTMLNGYIEC-----GMIKEARKLFDGPDAEKSVSTWSTMVNGYVK 150
M D+R ML C G + + G D+E V+ ++N + K
Sbjct: 492 NMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVA--HALINMFTK 549
Query: 151 INQIEEAERLFYEMP-ERKDVSWNIMMGGYGQNGQIEKALDLFRRMP--EPERNVVSWNT 207
+ + A LF + E+ VSWNIMM GY +GQ E+A+ FR+M + + N V++
Sbjct: 550 CDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVN 609
Query: 208 IIKA 211
I++A
Sbjct: 610 IVRA 613
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
+ I C A VF+++ +D W TM+ Y G +E +LFD M D R
Sbjct: 238 SGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVR 297
Query: 108 L---------WTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAE 158
+ G + G+ + G + SV+T ++++ Y K ++E AE
Sbjct: 298 MNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVAT--SLMSMYSKCGELEIAE 355
Query: 159 RLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIK--ALVR 214
+LF + +R VSW+ M+ Y Q GQ ++A+ LFR M + N V+ ++++ A V
Sbjct: 356 QLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVA 415
Query: 215 CGRIEDAQWHFNQMQERERDVSSWTTIVD 243
R+ + + + E ++ + T ++
Sbjct: 416 ASRLGKSIHCYAIKADIESELETATAVIS 444
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 59 RTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER-----DTRLWTTML 113
R D +R +FD + + + LW++MI GY + G+ +EA F M+E D +T L
Sbjct: 48 RQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFAL 107
Query: 114 NGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV 170
K+ ++ D E V + +V Y K + A ++F +M + V
Sbjct: 108 KACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVV 167
Query: 171 SWNIMMGGYGQNGQIEKALDLFRRM 195
+WN M+ G QNG AL LF M
Sbjct: 168 TWNTMVSGLAQNGCSSAALLLFHDM 192
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 23/163 (14%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM----AE 103
S +S K G + A ++F + +RD+ W MI Y + G EA LF M +
Sbjct: 339 TSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIK 398
Query: 104 RDTRLWTTMLNG-----------YIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKIN 152
+ T++L G I C IK D E + T + +++ Y K
Sbjct: 399 PNAVTLTSVLQGCAGVAASRLGKSIHCYAIK--------ADIESELETATAVISMYAKCG 450
Query: 153 QIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
+ A + F +P + V++N + GY Q G KA D+++ M
Sbjct: 451 RFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNM 493
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 114/261 (43%), Gaps = 55/261 (21%)
Query: 35 ASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEA 94
A F +++ ++ I G+ + ARKVFD++P+R++ W +MI GY G +A
Sbjct: 102 AFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDA 161
Query: 95 RKLF-----DQMAERDTRLWTTM-LNGYIEC-------GMIKEARKLFDGPDAEKSVSTW 141
LF D+ + D +M L I G+ + ++ VS
Sbjct: 162 VSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVG 221
Query: 142 STMVNGYVKINQ--IEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP- 198
+T+++ Y K + + A ++F ++ ++ VS+N +M Y Q+G +A ++FRR+ +
Sbjct: 222 NTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNK 281
Query: 199 -------------------------------------ERNVVSWNTIIKALVRCGRIEDA 221
E +V+ +II +CGR+E A
Sbjct: 282 VVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETA 341
Query: 222 QWHFNQMQERERDVSSWTTIV 242
+ F++M + ++V SWT ++
Sbjct: 342 RKAFDRM--KNKNVRSWTAMI 360
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 101/203 (49%), Gaps = 15/203 (7%)
Query: 57 EGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLW-----TT 111
EG ARK+FDQ+ ++D ++++++ Y + GM EA ++F ++ + + +T
Sbjct: 233 EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLST 292
Query: 112 MLNGYIECGMIKEARKLFDGP---DAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK 168
+L G ++ + + D E V +++++ Y K ++E A + F M +
Sbjct: 293 VLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKN 352
Query: 169 DVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCG-RIEDAQWHF 225
SW M+ GYG +G KAL+LF M + N +++ +++ A G +E +W F
Sbjct: 353 VRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRW-F 411
Query: 226 NQMQER---ERDVSSWTTIVDCL 245
N M+ R E + + +VD L
Sbjct: 412 NAMKGRFGVEPGLEHYGCMVDLL 434
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 17/152 (11%)
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG 131
E D+ + ++I+ Y KCG ++ ARK FD+M ++ R WT M+ GY G +A +LF
Sbjct: 319 EDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPA 378
Query: 132 -------PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS-----WNIMMGGY 179
P+ VS + + + + E R F M R V + M+
Sbjct: 379 MIDSGVRPNYITFVSVLAACSHAGLHV----EGWRWFNAMKGRFGVEPGLEHYGCMVDLL 434
Query: 180 GQNGQIEKALDLFRRMPEPERNVVSWNTIIKA 211
G+ G ++KA DL +RM +++ W++++ A
Sbjct: 435 GRAGFLQKAYDLIQRMKMKPDSII-WSSLLAA 465
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 111/235 (47%), Gaps = 27/235 (11%)
Query: 37 TFSLNTEMKRCNS---------FISRLCKEGRTDHARKVFDQMPERDMR----LWDTMIN 83
F++ EM +CN + L K+GRT A+K+FD M R + + +I+
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241
Query: 84 GYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIECGMIKEA---RKLFDGPDAEK 136
G + G +ARKLF +M D+ +L+G+ + G + EA +LF+
Sbjct: 242 GLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVL 301
Query: 137 SVSTWSTMVNGYVKINQIEEAERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLF 192
+ +S++++G + + +A L+ M ++ + + I++ G + G+IE AL L
Sbjct: 302 GLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLL 361
Query: 193 RRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWT-TIVDC 244
MP + +N +IKAL G +E+ + +M E E + T TI+ C
Sbjct: 362 SSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILIC 416
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 99/219 (45%), Gaps = 23/219 (10%)
Query: 50 FISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAER- 104
I L K G+ + A K+ MP + D ++ +I G+++E R L +M+E
Sbjct: 344 LIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETE 403
Query: 105 ---DTRLWTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKINQIEEAE 158
D T ++ G+++EA ++F + SV+T++ +++G K +++EA
Sbjct: 404 SFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEAR 463
Query: 159 RLFYEMPERKDVSWNIMMGGYG--------QNGQIEKALDLFRRMPE--PERNVVSWNTI 208
L ++M + S + + G ++G I KA + ++VS+N +
Sbjct: 464 LLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVL 523
Query: 209 IKALVRCGRIEDAQWHFN--QMQERERDVSSWTTIVDCL 245
I R G I+ A N Q++ D ++ T+++ L
Sbjct: 524 INGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGL 562
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 102/216 (47%), Gaps = 21/216 (9%)
Query: 50 FISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAERD 105
IS LC+ G D ARK+F +M D + +++G+ K G + EA +L ++ E+D
Sbjct: 239 LISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELL-RLFEKD 297
Query: 106 -----TRLWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIEEA 157
R ++++++G +A +L+ + + + ++ ++ G K +IE+A
Sbjct: 298 GFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDA 357
Query: 158 ERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIKA 211
+L MP + +N ++ G +E+ L M E E + + +I +
Sbjct: 358 LKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICS 417
Query: 212 LVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
+ R G + +A+ F ++++ V+++ ++D L
Sbjct: 418 MCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGL 453
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 42/206 (20%)
Query: 39 SLNTEMKRCNSF---------ISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGY 85
SL EM SF I +C+ G A ++F ++ + + ++ +I+G
Sbjct: 394 SLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGL 453
Query: 86 IKCGMIKEAR------------KLFDQMAERDTRLWTTMLNGYIECGMIKEA-RKLFDGP 132
K G +KEAR LF +++ R + TM +E G I +A R L
Sbjct: 454 CKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTM----VESGSILKAYRDLAHFA 509
Query: 133 DAEKS--VSTWSTMVNGYVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIE 186
D S + +++ ++NG+ + I+ A +L + + V++N ++ G + G+ E
Sbjct: 510 DTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREE 569
Query: 187 KALDL------FRRMPEPERNVVSWN 206
+A L FR P R++++W+
Sbjct: 570 EAFKLFYAKDDFRHSPAVYRSLMTWS 595
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 16/181 (8%)
Query: 26 GYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGY 85
G L+S SL E+ N+F++ + G A VF +M ER++ W+ ++ GY
Sbjct: 113 GSKVYSIALSSMSSLGVELG--NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGY 170
Query: 86 IKCGMIKEARKLFDQM-----AERDTRLWTTMLNGYIECGMI------KEARKLFDGPDA 134
K G EA L+ +M + D + +L CG I KE
Sbjct: 171 AKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLR---TCGGIPDLARGKEVHVHVVRYGY 227
Query: 135 EKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRR 194
E + + ++ YVK ++ A LF MP R +SWN M+ GY +NG + L+LF
Sbjct: 228 ELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFA 287
Query: 195 M 195
M
Sbjct: 288 M 288
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 70/164 (42%), Gaps = 38/164 (23%)
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG 131
E D+ + + +I Y+KCG +K AR LFD+M RD W M++GY E GM E +LF
Sbjct: 228 ELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFA 287
Query: 132 -------PDA-------------------------------EKSVSTWSTMVNGYVKINQ 153
PD +S +++ Y+
Sbjct: 288 MRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGS 347
Query: 154 IEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE 197
EAE+LF M + VSW M+ GY N +KA+D +R M +
Sbjct: 348 WREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQ 391
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 10/179 (5%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYI 117
GR HA V D+ + +++ Y+ G +EA KLF +M +D WTTM++GY
Sbjct: 316 GRDIHAY-VITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYE 374
Query: 118 ECGMIKEA---RKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSW-- 172
+ +A ++ D + T + +++ + ++ L + + +S+
Sbjct: 375 YNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVI 434
Query: 173 --NIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
N ++ Y + I+KALD+F +P +NV+SW +II L R +A QM+
Sbjct: 435 VANNLINMYSKCKCIDKALDIFHNIPR--KNVISWTSIIAGLRLNNRCFEALIFLRQMK 491
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 99/264 (37%), Gaps = 57/264 (21%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
IH Y T ++ CNS G A K+F +M +D+ W TMI+
Sbjct: 319 IHAYVI-------TTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMIS 371
Query: 84 GYIKCGMIKEARKLFDQMAERDTR---------LWTTMLNGYIECGMIKEARKLFDGPDA 134
GY + +A + M + + L G ++ G+ E KL
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGV--ELHKLAIKARL 429
Query: 135 EKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRR 194
V + ++N Y K I++A +F+ +P + +SW ++ G N + +AL R+
Sbjct: 430 ISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQ 489
Query: 195 MP---EPE----------------------------RNVVSW-----NTIIKALVRCGRI 218
M +P R V N ++ VRCGR+
Sbjct: 490 MKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRM 549
Query: 219 EDAQWHFNQMQERERDVSSWTTIV 242
A FN +++DV+SW ++
Sbjct: 550 NTAWSQFNS---QKKDVTSWNILL 570
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 20/217 (9%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
IHG+ +RT ++ F N S I K G D A VF+Q+ R + W++M+
Sbjct: 427 IHGH-VIRTDVSDEFVQN-------SLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLC 478
Query: 84 GYIKCGMIKEARKLFDQM----AERDTRLWTTMLNGYIECGMIKEAR----KLFDGPDAE 135
G+ + G EA LFD M E + + ++ G +++ + KL
Sbjct: 479 GFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLI--ISGL 536
Query: 136 KSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
K + T + +++ Y K + AE +F M R VSW+ M+ YG +G+I A+ F +M
Sbjct: 537 KDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQM 596
Query: 196 PEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
E + N V + ++ A G +E+ +++FN M+
Sbjct: 597 VESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS 633
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 14/196 (7%)
Query: 52 SRLCKEGRTDH---ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF----DQMAER 104
S LC G+T + A KVFD MP RD+ W T+++ ++ G + +A ++F D E
Sbjct: 141 SLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEP 200
Query: 105 DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNG----YVKINQIEEAERL 160
D +++ G E G ++ AR + G K T+ N Y K + +ER+
Sbjct: 201 DAVTMISVVEGCAELGCLRIARSV-HGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERI 259
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRI 218
F ++ ++ VSW M+ Y + EKAL F M + E N+V+ +++ + G I
Sbjct: 260 FEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLI 319
Query: 219 EDAQWHFNQMQERERD 234
+ + RE D
Sbjct: 320 REGKSVHGFAVRRELD 335
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 76/160 (47%), Gaps = 14/160 (8%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA---- 102
CNS ++ K G + ++F+++ +++ W MI+ Y + ++A + F +M
Sbjct: 240 CNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGI 299
Query: 103 ERDTRLWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTMVNGYVKINQIE 155
E + ++L+ G+I+E + + P+ E S +V Y + ++
Sbjct: 300 EPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYE---SLSLALVELYAECGKLS 356
Query: 156 EAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
+ E + + +R V+WN ++ Y G + +AL LFR+M
Sbjct: 357 DCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQM 396
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 12/200 (6%)
Query: 37 TFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARK 96
F+L + + C + + L G+ H + + D + +++I+ Y K G + A
Sbjct: 405 AFTLASSISACEN--AGLVPLGKQIHGHVI--RTDVSDEFVQNSLIDMYSKSGSVDSAST 460
Query: 97 LFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQ 153
+F+Q+ R W +ML G+ + G EA LFD E + T+ ++ I
Sbjct: 461 VFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGS 520
Query: 154 IEEAERLFYEM--PERKDV-SWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIK 210
+E+ + + +++ KD+ + ++ Y + G + A +FR M S ++I
Sbjct: 521 LEKGKWVHHKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWS--SMIN 578
Query: 211 ALVRCGRIEDAQWHFNQMQE 230
A GRI A FNQM E
Sbjct: 579 AYGMHGRIGSAISTFNQMVE 598
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 78/177 (44%), Gaps = 27/177 (15%)
Query: 28 PFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIK 87
P+ T+LA ++LN ++ ARK+FD PER + LW+++I Y K
Sbjct: 40 PYFATQLARFYALNDDLIS----------------ARKLFDVFPERSVFLWNSIIRAYAK 83
Query: 88 CGMIKEARKLFDQMAERDTR----LWTTMLNGYIECGMIKEAR-----KLFDGPDAEKSV 138
LF Q+ DTR + + G+ E K R + G ++
Sbjct: 84 AHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQIC 143
Query: 139 STWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
S +V Y K I EA +LF +P+ WN+M+ GYG G +K ++LF M
Sbjct: 144 G--SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLM 198
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 13/179 (7%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM----AERDTRLWTTMLNGYIE 118
A VF+ + E D+ ++I GY +CG KEA LF ++ + D L +L E
Sbjct: 261 ACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAE 320
Query: 119 CG---MIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIM 175
KE E + S +++ Y K ++ A LF +PE+ VS+N +
Sbjct: 321 LSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSL 380
Query: 176 MGGYGQNGQIEKALDLFRRMPE----PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
+ G G +G A + F + E P+ ++++ ++ G + Q F +M+
Sbjct: 381 ILGLGLHGFASTAFEKFTEILEMGLIPDE--ITFSALLCTCCHSGLLNKGQEIFERMKS 437
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 114/280 (40%), Gaps = 72/280 (25%)
Query: 16 HKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDM 75
H + H LI Y LR L + L C G + A +VFD+M +RD
Sbjct: 110 HGVRVHHLIPPY-LLRNNLGISSKLVRLYASC----------GYAEVAHEVFDRMSKRDS 158
Query: 76 R--LWDTMINGYIKCGMIKEARKLFDQMAERDTR---------------LWTTMLNGYIE 118
W+++I+GY + G ++A L+ QMAE + + + + I
Sbjct: 159 SPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIH 218
Query: 119 CGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGG 178
++KE G D V + +V Y K I +A +F +P + VSWN M+ G
Sbjct: 219 RDLVKEGF----GYD----VYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTG 270
Query: 179 YGQNGQIEKALDLFRRMP----EPERNVVS-----------------W------------ 205
Y +G + +ALD+FR M EP++ +S W
Sbjct: 271 YLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLHGWVIRRGMEWELSV 330
Query: 206 -NTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVDC 244
N +I + G++ A + F+QM ERD SW I+
Sbjct: 331 ANALIVLYSKRGQLGQACFIFDQM--LERDTVSWNAIISA 368
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 91/192 (47%), Gaps = 15/192 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA----E 103
N+ + K G AR VFD +P +D W++M+ GY+ G++ EA +F M E
Sbjct: 234 NALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIE 293
Query: 104 RDTRLWTTMLNGYIECGMIKEARKLFD-----GPDAEKSVSTWSTMVNGYVKINQIEEAE 158
D +++L + K R+L G + E SV+ + ++ Y K Q+ +A
Sbjct: 294 PDKVAISSVLARVLS---FKHGRQLHGWVIRRGMEWELSVA--NALIVLYSKRGQLGQAC 348
Query: 159 RLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRI 218
+F +M ER VSWN ++ + +N K + R + + +++ +++ G +
Sbjct: 349 FIFDQMLERDTVSWNAIISAHSKNSNGLKYFEQMHR-ANAKPDGITFVSVLSLCANTGMV 407
Query: 219 EDAQWHFNQMQE 230
ED + F+ M +
Sbjct: 408 EDGERLFSLMSK 419
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 84/194 (43%), Gaps = 20/194 (10%)
Query: 43 EMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM- 101
E+ N+ I K G+ A +FDQM ERD W+ +I+ + K K F+QM
Sbjct: 327 ELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKN---SNGLKYFEQMH 383
Query: 102 ---AERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVST----WSTMVNGYVKINQI 154
A+ D + ++L+ GM+++ +LF E + ++ MVN Y + +
Sbjct: 384 RANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMM 443
Query: 155 EEAERLFY-EMP-ERKDVSWNIMMGGYGQNGQIE----KALDLFRRMPEPERNVVSWNTI 208
EEA + EM E W ++ +G + A LF P+ E N + +
Sbjct: 444 EEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHN---FELL 500
Query: 209 IKALVRCGRIEDAQ 222
I+ + R ED +
Sbjct: 501 IRIYSKAKRAEDVE 514
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 19/205 (9%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF 98
++++ + R SF K GR H + M E ++ + + +I Y K G + +A +F
Sbjct: 298 AISSVLARVLSF-----KHGRQLHGWVIRRGM-EWELSVANALIVLYSKRGQLGQACFIF 351
Query: 99 DQMAERDTRLWTTMLNGYIE----CGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQI 154
DQM ERDT W +++ + + ++ + PD VS S N +
Sbjct: 352 DQMLERDTVSWNAIISAHSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCAN----TGMV 407
Query: 155 EEAERLFYEMPERKDVS-----WNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTII 209
E+ ERLF M + + + M+ YG+ G +E+A + + E W ++
Sbjct: 408 EDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALL 467
Query: 210 KALVRCGRIEDAQWHFNQMQERERD 234
A G + + ++ E E D
Sbjct: 468 YACYLHGNTDIGEVAAQRLFELEPD 492
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 108/236 (45%), Gaps = 52/236 (22%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFD---- 99
NS I+ LC G+ A + D+M + ++ ++ +ING+ K M+KEA +F
Sbjct: 335 NSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKG 394
Query: 100 QMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNGYVKINQIEE 156
Q A TR++ +++ Y + G I + L + + E V T++ ++ G + IE
Sbjct: 395 QGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEA 454
Query: 157 AERLFYEMPER--------------------------------------KDVSWNIMMGG 178
A++LF ++ + + +++NI+M G
Sbjct: 455 AKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKG 514
Query: 179 YGQNGQIEKALDLFRRMPEPER---NVVSWNTIIKALVRCGRIEDAQWHFNQMQER 231
Y + G ++ A ++ +M + R NV S+N +++ + G++EDA N+M E+
Sbjct: 515 YCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 102/207 (49%), Gaps = 26/207 (12%)
Query: 48 NSFISRLCK---EGRTDHARKVFDQMPERD----MRLWDTMINGYIKCGMIKEARKLFDQ 100
N+ I CK G+ A V +M E D + ++ +I+G+ K + + K+F +
Sbjct: 262 NTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKE 321
Query: 101 MAERDTR----LWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQ 153
M ++D + + +++NG G I EA + D + ++ T++ ++NG+ K +
Sbjct: 322 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM 381
Query: 154 IEEAERLFYEMPERKDVS----WNIMMGGYGQNGQIEKALDLFRRMPEPER-----NVVS 204
++EA +F + + V +N+++ Y + G+I+ D F E ER +V +
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKID---DGFALKEEMEREGIVPDVGT 438
Query: 205 WNTIIKALVRCGRIEDAQWHFNQMQER 231
+N +I L R G IE A+ F+Q+ +
Sbjct: 439 YNCLIAGLCRNGNIEAAKKLFDQLTSK 465
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 83/165 (50%), Gaps = 21/165 (12%)
Query: 23 LIHGYPFLRTRLASTFSLNTEMKR---------CNSFISRLCKEGRTDHARKVFDQMPER 73
LI Y L ++ F+L EM+R N I+ LC+ G + A+K+FDQ+ +
Sbjct: 407 LIDAYCKL-GKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK 465
Query: 74 ---DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR----LWTTMLNGYIECGMIKEAR 126
D+ + ++ GY + G ++A L +M++ + + ++ GY + G +K A
Sbjct: 466 GLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAAT 525
Query: 127 KLFDGPDAEK----SVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
+ + E+ +V++++ ++ GY + ++E+A L EM E+
Sbjct: 526 NMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 98/190 (51%), Gaps = 24/190 (12%)
Query: 13 MHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPE 72
+HA ++T L++G R +AS C + G +ARKVFD++P+
Sbjct: 36 IHAFVISTGNLLNGSSISRDLIAS----------CG-------RIGEISYARKVFDELPQ 78
Query: 73 RDMRLWDTMINGYIKCGMIKEARKLFDQM-AER---DTRLWTTMLNGYIECGMIKEARKL 128
R + ++++MI Y + E +L+DQM AE+ D+ +T + + ++++ +
Sbjct: 79 RGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAV 138
Query: 129 FDGP---DAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQI 185
+ + V S+++N Y+K +++EAE LF +M +R + W M+ G+ Q G+
Sbjct: 139 WCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKS 198
Query: 186 EKALDLFRRM 195
KA++ +R M
Sbjct: 199 LKAVEFYREM 208
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 16/195 (8%)
Query: 35 ASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEA 94
A F ++ C+S ++ K G+ D A +F +M +RD+ W TM+ G+ + G +A
Sbjct: 142 AVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKA 201
Query: 95 RKLFDQMAE----RDTRLWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNG 147
+ + +M RD + +L + G K R + +V +++V+
Sbjct: 202 VEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDM 261
Query: 148 YVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP----EPERNVV 203
Y K+ IE A R+F M + VSW ++ G+ QNG KA + M +P+
Sbjct: 262 YAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPD---- 317
Query: 204 SWNTIIKALVRCGRI 218
T++ LV C ++
Sbjct: 318 -LVTLVGVLVACSQV 331
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 84/197 (42%), Gaps = 41/197 (20%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECG-- 120
A VFD+MP RD+ W+ MINGY K + +A F+ M RD W +ML+GY++ G
Sbjct: 102 ASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGES 161
Query: 121 ---------MIKEARKLFDG----------------------------PDAEKSVSTWST 143
M +E + FDG + V S
Sbjct: 162 LKSIEVFVDMGREGIE-FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASA 220
Query: 144 MVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVV 203
+++ Y K + E+ R+F +PE+ VSW+ ++ G QN + AL F+ M + V
Sbjct: 221 LLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAG-V 279
Query: 204 SWNTIIKALVRCGRIED 220
S + L C + +
Sbjct: 280 SQSIYASVLRSCAALSE 296
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 93/190 (48%), Gaps = 11/190 (5%)
Query: 50 FISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER----D 105
F R G + K+ ++ + W+++I+GY+ ++A+ LF +M E D
Sbjct: 543 FFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPD 602
Query: 106 TRLWTTMLN---GYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFY 162
+ T+L+ G+ K+ + + V ST+V+ Y K + ++ RL +
Sbjct: 603 KFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDS-RLMF 661
Query: 163 EMPERKD-VSWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIKALVRCGRIE 219
E R+D V+WN M+ GY +G+ E+A+ LF RM + N V++ +I++A G I+
Sbjct: 662 EKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLID 721
Query: 220 DAQWHFNQMQ 229
+F M+
Sbjct: 722 KGLEYFYMMK 731
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 25/220 (11%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE 93
LA SL+ ++ N+ I K A +VFD+M RD W+ +I + + G E
Sbjct: 407 LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYE 466
Query: 94 ARKLFDQM----AERDTRLWTTML----NGYIECGMIKEARKLFDGPDAEKSVSTWSTMV 145
LF M E D + ++L G + GM + + G + SV +++
Sbjct: 467 TLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGC--SLI 524
Query: 146 NGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSW 205
+ Y K IEEAE++ +R +VS G ++EK + +R+ E VSW
Sbjct: 525 DMYSKCGMIEEAEKIHSRFFQRANVS--------GTMEELEKMHN--KRLQEM---CVSW 571
Query: 206 NTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVD 243
N+II V + EDAQ F +M E D ++ T++D
Sbjct: 572 NSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLD 611
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 13/149 (8%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
L +++ C++ + K G +R +F++ RD W+ MI GY G +EA +LF+
Sbjct: 634 LQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFE 693
Query: 100 QMAERDTR----LWTTMLNGYIECGMIKEARKLF------DGPDAEKSVSTWSTMVNGYV 149
+M + + + ++L G+I + + F G D + + +S MV+
Sbjct: 694 RMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQ--LPHYSNMVDILG 751
Query: 150 KINQIEEAERLFYEMP-ERKDVSWNIMMG 177
K +++ A L EMP E DV W ++G
Sbjct: 752 KSGKVKRALELIREMPFEADDVIWRTLLG 780
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 115 GYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNI 174
G +E G A + G + + ++ Y A +F +MP R VSWN
Sbjct: 62 GALELGKQAHAHMIISG--FRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNK 119
Query: 175 MMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCG 216
M+ GY ++ + KA F M P R+VVSWN+++ ++ G
Sbjct: 120 MINGYSKSNDMFKANSFFNMM--PVRDVVSWNSMLSGYLQNG 159
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 37 TFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARK 96
+ LN + NS + G A +F M RD+ W T+I GY + G +E K
Sbjct: 338 SLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFK 397
Query: 97 LFDQMAERDTR----LWTTMLN-----GYIECGMIKEARKLFDGPDAEKSVSTWSTMVNG 147
F M + T+ ++L+ IE G A L G + +V S+++N
Sbjct: 398 YFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVR--SSLINM 455
Query: 148 YVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSW 205
Y K I+EA +F E VS M+ GY ++G+ ++A+DLF + + + V++
Sbjct: 456 YSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTF 515
Query: 206 NTIIKALVRCGRIEDAQWHFNQMQE 230
+++ A G+++ +FN MQE
Sbjct: 516 ISVLTACTHSGQLDLGFHYFNMMQE 540
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 95/241 (39%), Gaps = 48/241 (19%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF------DQM 101
NS + L G AR+VFD+MP D+ W ++I Y+ EA LF D
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 102 AERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAE 158
DT + + +L + I L SV S++++ Y ++ +I+++
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 159 RLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER------------------ 200
R+F EMP R V+W ++ G G+ ++ L F M E
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLR 223
Query: 201 -----NVVSWNTIIKALV--------------RCGRIEDAQWHFNQMQERERDVSSWTTI 241
+ + I++ V CG ++D F M ERDV SWT++
Sbjct: 224 QVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMS--ERDVVSWTSL 281
Query: 242 V 242
+
Sbjct: 282 I 282
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 24/220 (10%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE 93
++S + T + C + IS L K + R M + D ++ + I G ++
Sbjct: 2 ISSVRNCGTIQRFCTTSISLLQKPVEENIVRISNQVMVKFDP---NSHLRSLINAGNLRA 58
Query: 94 ARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG---------PDAEKSVSTWSTM 144
AR++FD+M D WT+++ Y+ EA LF PD S S +
Sbjct: 59 ARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPD----TSVLSVV 114
Query: 145 VNGYVKINQIEEAERLFYEMPERKDVSWNIMMGG-----YGQNGQIEKALDLFRRMPEPE 199
+ + + I E L + + + ++ +G Y + G+I+K+ +F MP
Sbjct: 115 LKACGQSSNIAYGESL-HAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPF-- 171
Query: 200 RNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWT 239
RN V+W II LV GR ++ +F++M E ++T
Sbjct: 172 RNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYT 211
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 47/215 (21%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE 93
LAS S++ M + + GR HA + + E++ + ++IN Y KCG IKE
Sbjct: 414 LASLLSVSGNMA--------VIEGGRQVHALALCFGL-EQNSTVRSSLINMYSKCGSIKE 464
Query: 94 ARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQ 153
A +F + D T M+NGY E G KEA LF EKS+ G+
Sbjct: 465 ASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLF-----EKSLKV------GF----- 508
Query: 154 IEEAERLFYEMPERKD-VSWNIMMGGYGQNGQIEKALDLFRRMPE-----PERNVVSWNT 207
R D V++ ++ +GQ++ F M E P + +
Sbjct: 509 -------------RPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKE--HYGC 553
Query: 208 IIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
++ L R GR+ DA+ N+M ++ DV WTT++
Sbjct: 554 MVDLLCRAGRLSDAEKMINEMSWKKDDV-VWTTLL 587
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE 93
L+ T++ +K C R K G+ H + + + +++ Y +CG +++
Sbjct: 206 LSDTYTFAIALKACAGL--RQVKYGKAIHTHVIVRGFVT-TLCVANSLATMYTECGEMQD 262
Query: 94 ARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF------DGPDAEKSVSTWSTMVNG 147
LF+ M+ERD WT+++ Y G +A + F P E+ T+++M +
Sbjct: 263 GLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQ---TFASMFSA 319
Query: 148 YVKINQIEEAERLFYE-----MPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNV 202
++++ E+L + + VS N MM Y G + A LF+ M R++
Sbjct: 320 CASLSRLVWGEQLHCNVLSLGLNDSLSVS-NSMMKMYSTCGNLVSASVLFQGM--RCRDI 376
Query: 203 VSWNTIIKALVRCGRIEDAQWHFNQMQE 230
+SW+TII + G E+ +F+ M++
Sbjct: 377 ISWSTIIGGYCQAGFGEEGFKYFSWMRQ 404
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 37 TFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARK 96
T L+ +K C S G + HA V + + + ++++ Y + G I ++ +
Sbjct: 108 TSVLSVVLKACGQ--SSNIAYGESLHAYAVKTSLLS-SVYVGSSLLDMYKRVGKIDKSCR 164
Query: 97 LFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS---TWSTMVNGYVKINQ 153
+F +M R+ WT ++ G + G KE F + +S T++ + + Q
Sbjct: 165 VFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQ 224
Query: 154 IEEAERLFYEMPERKDVS----WNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTII 209
++ + + + R V+ N + Y + G+++ L LF M E R+VVSW ++I
Sbjct: 225 VKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSE--RDVVSWTSLI 282
Query: 210 KALVRCGRIEDAQWHFNQMQERE 232
A R G+ A F +M+ +
Sbjct: 283 VAYKRIGQEVKAVETFIKMRNSQ 305
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 9/181 (4%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYI 117
G A KVFD+MPER+ W+ MI G G ++A ++M R WTT+++GY
Sbjct: 172 GNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYA 231
Query: 118 ECGMIKEARKLFDGPDAEKSVS----TWSTMVNGYVKINQIEEAERLFYEMPERKDVSWN 173
KEA LF A ++ T ++ + ++ + + +R V +
Sbjct: 232 RVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCD 291
Query: 174 I-----MMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
I ++ Y + G I+ A F +P +N+VSW T+I A G ++A F M
Sbjct: 292 IRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDM 351
Query: 229 Q 229
+
Sbjct: 352 E 352
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 48/204 (23%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQM--AERDTRLWTTMLNGYIECGMIKEARKLF-- 129
D+R+ +++I+ Y KCG I+ A K F ++ ++ WTTM++ + GM KEA +F
Sbjct: 291 DIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKD 350
Query: 130 ----------------------DGPDAEKSVSTWSTMVNGYVKI---------------- 151
G E+ + ++TMVN Y KI
Sbjct: 351 MERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEY-KITPDVKHYGCLVDMLRR 409
Query: 152 -NQIEEAERLFYEMP-ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTII 209
++EEAE++ E+P E K V W +++G E A + R++ E ER+ + ++
Sbjct: 410 KGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERS-HGGDYVL 468
Query: 210 KALVRC--GRIEDAQWHFNQMQER 231
+ + C GR DAQ QM R
Sbjct: 469 MSNIFCGTGRFLDAQRFRKQMDVR 492
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 110/225 (48%), Gaps = 19/225 (8%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
F L+++++ N+ IS K G+ + A +F++ +++ W+ +I+G+ G E +
Sbjct: 415 FGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLER 474
Query: 98 FDQMAERDTRLW------TTMLN-----GYIECGMIKEARKLFDGPDAEKSVSTWSTMVN 146
F + E + R+ +T+L+ + G A L G E + + ++N
Sbjct: 475 FSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIG--NALIN 532
Query: 147 GYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER---NVV 203
Y + I+ + +F +M E+ VSWN ++ Y ++G+ E A++ ++ M + + +
Sbjct: 533 MYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAA 592
Query: 204 SWNTIIKALVRCGRIEDAQWHFNQMQERE---RDVSSWTTIVDCL 245
+++ ++ A G +E+ FN M E R+V ++ +VD L
Sbjct: 593 TFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLL 637
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 95/223 (42%), Gaps = 45/223 (20%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM----AERDTRLWTTMLNGYIE 118
A KVF+ + E+D+ W+TMI+ Y + + K A ++ +M + D + ++L ++
Sbjct: 342 AHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLD 401
Query: 119 CGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGG 178
+++ + + + +++ Y K QIE+A+ LF + +SWN ++ G
Sbjct: 402 LDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISG 461
Query: 179 YGQNGQIEKALDLFRRMPEPE--------------------------------------- 199
+ NG + L+ F + E E
Sbjct: 462 FYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQF 521
Query: 200 RNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+ + N +I +CG I+++ FNQM E+DV SW +++
Sbjct: 522 KETLIGNALINMYSQCGTIQNSLEVFNQMS--EKDVVSWNSLI 562
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 11/142 (7%)
Query: 55 CKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLN 114
C R D R +R DT+ G + C I+ ++ T+L+
Sbjct: 50 CTTLRPDQYSVSLAITTARHLR--DTIFGGQVHCYAIRSGLLCHSHVS-------NTLLS 100
Query: 115 GYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS-WN 173
Y G + +K FD D E V +W+T+++ K+ IE A +F +MPER DV+ WN
Sbjct: 101 LYERLGNLASLKKKFDEID-EPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWN 159
Query: 174 IMMGGYGQNGQIEKALDLFRRM 195
M+ G ++G E +++LFR M
Sbjct: 160 AMITGCKESGYHETSVELFREM 181
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER-DT 106
N+ +S + G +K FD++ E D+ W T+++ K G I+ A ++FD+M ER D
Sbjct: 96 NTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDV 155
Query: 107 RLWTTMLNGYIECGMIKEARKLF 129
+W M+ G E G + + +LF
Sbjct: 156 AIWNAMITGCKESGYHETSVELF 178
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 112/281 (39%), Gaps = 65/281 (23%)
Query: 18 LNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRL 77
L+ L+HG L L+ ++ N I K G+ D A +FD+ ERD
Sbjct: 164 LDLGELLHG-------LVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVS 216
Query: 78 WDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLN------------GYIECGMIKEA 125
W+++I+GY++ G +E L +M L T L G+IE GM
Sbjct: 217 WNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHC 276
Query: 126 RKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQI 185
G + + V T +++ Y K ++EA +LF MP + V++N M+ G+ Q +I
Sbjct: 277 YTAKLGMEFDIVVRT--ALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEI 334
Query: 186 -----EKALDLF----RRMPEPERNVVS-------------------------------- 204
+A LF RR EP + S
Sbjct: 335 TDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEF 394
Query: 205 -WNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVDC 244
+ +I+ G ED F ++D++SWT+++DC
Sbjct: 395 IGSALIELYALMGSTEDGMQCF--ASTSKQDIASWTSMIDC 433
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 87/168 (51%), Gaps = 13/168 (7%)
Query: 55 CKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLN 114
CK AR++FD+MPER++ ++++I+GY + G ++A +LF + E + +L
Sbjct: 93 CKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYA 152
Query: 115 GY---------IECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMP 165
G ++ G + + +G + V + +++ Y K ++++A LF
Sbjct: 153 GALGFCGERCDLDLGELLHGLVVVNG--LSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 166 ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSW--NTIIKA 211
ER VSWN ++ GY + G E+ L+L +M N+ ++ +++KA
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKA 258
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMI-----KEARKLFDQMAER----DT 106
K G A K+F MP +++ ++ MI+G+++ I EA KLF M R
Sbjct: 299 KNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSP 358
Query: 107 RLWTTMLNGYIECGMIKEARK---LFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYE 163
++ +L ++ R+ L + + S ++ Y + E+ + F
Sbjct: 359 STFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFAS 418
Query: 164 MPERKDVSWNIMMGGYGQNGQIEKALDLFRRM----PEPERNVVS 204
++ SW M+ + QN Q+E A DLFR++ PE VS
Sbjct: 419 TSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVS 463
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 100/201 (49%), Gaps = 17/201 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N +++LCK+GRT A +VFD+M ER ++ ++T+I G + + EA K+ DQM
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKS 331
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKL---FDGPDAEKSVSTWSTMVNGYVKINQIEE 156
+ T+++G+ G + +A L S+ T++ +V+G+ +
Sbjct: 332 DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSG 391
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIK 210
A ++ EM ER V++ I++ + ++ +EKA+ L M E +V +++ +I
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIH 451
Query: 211 ALVRCGRIEDAQWHFNQMQER 231
G++ +A F M E+
Sbjct: 452 GFCIKGQMNEASRLFKSMVEK 472
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 81/152 (53%), Gaps = 11/152 (7%)
Query: 105 DTRLWTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKINQIEEAERLF 161
D + ++ G E G I+++ L +V ++T+++G K +IE+A+ LF
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 162 YEMPERKDV----SWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIKALVRC 215
+EM + V ++ +++ G +NG ++ +++ +M E N+ ++N ++ L +
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 216 GRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
GR +DA F++M+ER ++ ++ T++ L
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL 313
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 50 FISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAERD 105
I+ L K G +++++M E ++ ++ ++N K G K+A ++FD+M ER
Sbjct: 239 LINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG 298
Query: 106 TRL----WTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNGYVKINQIEEAE 158
+ T++ G + EA K+ D ++ ++ T++T+++G+ + ++ +A
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL 358
Query: 159 RLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPE----PERNVVSWNTIIK 210
L ++ R V++NI++ G+ + G A + + M E P + V++ +I
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSK--VTYTILID 416
Query: 211 ALVRCGRIEDAQWHFNQMQERER--DVSSWTTIV 242
R +E A M+E DV +++ ++
Sbjct: 417 TFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLI 450
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 20/171 (11%)
Query: 37 TFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIK---CGM--I 91
TF N E N+ IS K G +AR+VFD+MP+RD+ W++++ Y + C + I
Sbjct: 67 TFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENI 126
Query: 92 KEARKLFDQMAERDTRLWTT------MLNGYIECGMIKEARKLFD-----GPDAEKSVST 140
++A LF + R ++T+ ML + G + + G D ++ V+
Sbjct: 127 QQAFLLFRIL--RQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVA- 183
Query: 141 WSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDL 191
+VN Y+K +++E + LF EMP R V WN+M+ Y + G E+A+DL
Sbjct: 184 -GALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 90/204 (44%), Gaps = 27/204 (13%)
Query: 8 LSFILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVF 67
++FILM A + L G +A L+ + NS I+ CK + AR VF
Sbjct: 316 VTFILMLATAVKVDSLALGQQV--HCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373
Query: 68 DQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARK 127
D M ERD+ W+++I G + G+ EA LF Q+ + + Y ++K A
Sbjct: 374 DNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLK-----PDQYTMTSVLKAASS 428
Query: 128 LFDGPDAEKSVSTWS-------------TMVNGYVKINQIEEAERLFYEMPERKD---VS 171
L +G K V + +++ Y + ++EAE LF ER + V+
Sbjct: 429 LPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF----ERHNFDLVA 484
Query: 172 WNIMMGGYGQNGQIEKALDLFRRM 195
WN MM GY Q+ K L LF M
Sbjct: 485 WNAMMAGYTQSHDGHKTLKLFALM 508
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 102/237 (43%), Gaps = 53/237 (22%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDT--MINGYIKCGMIKEAR 95
F+L T K C + +G+ HA + D+ LW + +++ Y+KCG + A+
Sbjct: 518 FTLATVFKTCGFLFA--INQGKQVHAYAI---KSGYDLDLWVSSGILDMYVKCGDMSAAQ 572
Query: 96 KLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG-------PDAEKSVSTWS------ 142
FD + D WTTM++G IE G + A +F PD E +++T +
Sbjct: 573 FAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPD-EFTIATLAKASSCL 631
Query: 143 --------------------------TMVNGYVKINQIEEAERLFYEMPERKDVSWNIMM 176
++V+ Y K I++A LF + +WN M+
Sbjct: 632 TALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAML 691
Query: 177 GGYGQNGQIEKALDLFRRMP----EPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
G Q+G+ ++ L LF++M +P++ V++ ++ A G + +A H M
Sbjct: 692 VGLAQHGEGKETLQLFKQMKSLGIKPDK--VTFIGVLSACSHSGLVSEAYKHMRSMH 746
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 87/194 (44%), Gaps = 41/194 (21%)
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF-- 129
E D+ L + +IN Y KCG ++ AR++FD M ER W TM+ Y M EA +F
Sbjct: 93 EGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLE 152
Query: 130 ------------------------DGPDAEK----SVSTW--------STMVNGYVKINQ 153
D + +K SV T + +++ Y K
Sbjct: 153 MRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGM 212
Query: 154 IEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP--EPERNVVSWNTIIKA 211
I++A ++F M ++ V+W+ M+ GY QN E+AL L+RR E+N + +++I A
Sbjct: 213 IKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICA 272
Query: 212 LVR-CGRIEDAQWH 224
IE Q H
Sbjct: 273 CSNLAALIEGKQMH 286
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 102/260 (39%), Gaps = 79/260 (30%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
N I+ K G + AR+VFD M ER + W+TMI Y + M EA +F +M
Sbjct: 100 NVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFK 159
Query: 105 ----------------------------------DTRLW--TTMLNGYIECGMIKEARKL 128
D L+ T +L+ Y +CGMIK+A ++
Sbjct: 160 FSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQV 219
Query: 129 FDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWN--------------- 173
F+ + SV TWS+MV GYV+ EEA L Y +R + N
Sbjct: 220 FESMQDKSSV-TWSSMVAGYVQNKNYEEA-LLLYRRAQRMSLEQNQFTLSSVICACSNLA 277
Query: 174 -----------IMMGGYGQNGQI-EKALDLFRRMPE-----------PERNVVSWNTIIK 210
I G+G N + A+D++ + E+N+ WNTII
Sbjct: 278 ALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIIS 337
Query: 211 ALVRCGRIEDAQWHFNQMQE 230
+ R ++ F +MQ+
Sbjct: 338 GFAKHARPKEVMILFEKMQQ 357
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 111/254 (43%), Gaps = 48/254 (18%)
Query: 36 STFSLNTEMKRCNSFISRL-CKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEA 94
S F++++ + C L CK+ + D ++ + +++ Y KCGMIK+A
Sbjct: 161 SEFTISSVLSACGVNCDALECKKLHCLSVKTCIDL----NLYVGTALLDLYAKCGMIKDA 216
Query: 95 RKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF------------------------- 129
++F+ M ++ + W++M+ GY++ +EA L+
Sbjct: 217 VQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNL 276
Query: 130 ----DGPDAE---------KSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMM 176
+G +V S+ V+ Y K + E+ +F E+ E+ WN ++
Sbjct: 277 AALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTII 336
Query: 177 GGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER--- 231
G+ ++ + ++ + LF +M + N V++++++ G +E+ + F M+
Sbjct: 337 SGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGL 396
Query: 232 ERDVSSWTTIVDCL 245
+V ++ +VD L
Sbjct: 397 SPNVVHYSCMVDIL 410
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 93/185 (50%), Gaps = 18/185 (9%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
F+L++ + C++ + + EG+ HA + ++ + + ++ Y KCG ++E+ +
Sbjct: 264 FTLSSVICACSNLAALI--EGKQMHA-VICKSGFGSNVFVASSAVDMYAKCGSLRESYII 320
Query: 98 FDQMAERDTRLWTTMLNGYIECGMIKEARKLF-----DGPDAEKSVSTWSTMVNGYVKIN 152
F ++ E++ LW T+++G+ + KE LF DG + T+S++++
Sbjct: 321 FSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNE--VTFSSLLSVCGHTG 378
Query: 153 QIEEAERLFYEMPERKDVSWNI-----MMGGYGQNGQIEKALDLFRRMP-EPERNVVSWN 206
+EE R F M +S N+ M+ G+ G + +A +L + +P +P ++ W
Sbjct: 379 LVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASI--WG 436
Query: 207 TIIKA 211
+++ +
Sbjct: 437 SLLAS 441
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 12/195 (6%)
Query: 48 NSF-ISRLCKEGRTDHARKVFDQ--MPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
NS+ I K G ++K+F+ ERD W++MI+GY + G ++ +F +M E+
Sbjct: 456 NSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQ 515
Query: 105 DTR----LWTTMLNGYIECGMIKEARKLFDGPD---AEKSVSTWSTMVNGYVKINQIEEA 157
+ R ++L + G + ++L +++V S +V+ Y K I+ A
Sbjct: 516 NIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYA 575
Query: 158 ERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRC 215
E +F + ER V++ M+ GYGQ+G E+A+ LF M E + + +++ ++ A
Sbjct: 576 EDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYS 635
Query: 216 GRIEDAQWHFNQMQE 230
G I++ F +M+E
Sbjct: 636 GLIDEGLKIFEEMRE 650
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 26/204 (12%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF 98
S++ +K+ N F + K G D+ +D+ + + I+ Y + G I+ +R++F
Sbjct: 225 SISRSIKKANVFYGLMLKLG---------DEYV-KDLFVVSSAISMYAELGDIESSRRVF 274
Query: 99 DQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSV----STWSTMVNGYVKINQI 154
D ER+ +W TM+ Y++ + E+ +LF K + T+ + + Q+
Sbjct: 275 DSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQV 334
Query: 155 EEAERL-------FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNT 207
E + F E+P V N +M Y + G + K+ +F M ER+VVSWNT
Sbjct: 335 ELGRQFHGFVSKNFRELP---IVIVNSLMVMYSRCGSVHKSFGVFLSM--RERDVVSWNT 389
Query: 208 IIKALVRCGRIEDAQWHFNQMQER 231
+I A V+ G ++ +MQ++
Sbjct: 390 MISAFVQNGLDDEGLMLVYEMQKQ 413
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 18/211 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS + + G + VF M ERD+ W+TMI+ +++ G+ E L +M ++ +
Sbjct: 357 NSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFK 416
Query: 108 L----WTTMLNGYI-----ECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAE 158
+ T +L+ E G A + G E S +++ Y K I ++
Sbjct: 417 IDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE---GMNSYLIDMYSKSGLIRISQ 473
Query: 159 RLF--YEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIKALVR 214
+LF ER +WN M+ GY QNG EK +FR+M E N V+ +I+ A +
Sbjct: 474 KLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQ 533
Query: 215 CGRIE-DAQWH-FNQMQERERDVSSWTTIVD 243
G ++ Q H F+ Q +++V + +VD
Sbjct: 534 IGSVDLGKQLHGFSIRQYLDQNVFVASALVD 564
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 98/238 (41%), Gaps = 61/238 (25%)
Query: 61 DHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAE----------------- 103
D RKVFD M +++ W+T+I+ Y+K G EA + F M
Sbjct: 165 DVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAV 224
Query: 104 ------------------------RDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS 139
+D + ++ ++ Y E G I+ +R++FD E+++
Sbjct: 225 SISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSC-VERNIE 283
Query: 140 TWSTMVNGYVKINQIEEAERLFYEMPERKD-----VSWNIMMGGYGQNGQIEKALDL--- 191
W+TM+ YV+ + + E+ LF E K+ V++ + Q+E
Sbjct: 284 VWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGF 343
Query: 192 ----FRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
FR +P +V N+++ RCG + + F M RERDV SW T++
Sbjct: 344 VSKNFRELP-----IVIVNSLMVMYSRCGSVHKSFGVFLSM--RERDVVSWNTMISAF 394
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 39/214 (18%)
Query: 31 RTRLASTFS---LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIK 87
+TR +STFS L + S +S++C++G AR++FD +P+ LW+T+I G+I
Sbjct: 23 QTRHSSTFSPPTLTPQTPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFIC 82
Query: 88 CGMIKEARKLFDQMAER------DTRLWTTMLNGYIECGMIKEARKL---FDGPDAEKSV 138
+ EA + +M + D +++ L E +K + + S
Sbjct: 83 NNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSR 142
Query: 139 STWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP 198
++++N YV + + Y++ + K D RR
Sbjct: 143 VVHNSLMNMYVSC--LNAPDCFEYDV--------------------VRKVFDNMRR---- 176
Query: 199 ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE 232
+NVV+WNT+I V+ GR +A F M E
Sbjct: 177 -KNVVAWNTLISWYVKTGRNAEACRQFGIMMRME 209
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 115/228 (50%), Gaps = 35/228 (15%)
Query: 51 ISRLCKEGRTDHARKVFDQMPE----RDMRLWDTMINGYIKCGMIKEARKLFDQMAER-- 104
++ LC + + A +F++M D+ + M++ + K G+I++ARK F++M E
Sbjct: 490 LNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC 549
Query: 105 --DTRLWTTMLNGYIECGMIKEARKLFDGPDAE---KSVSTWSTMVNGYVKINQIEEAER 159
+ +T +++ Y++ + A +LF+ +E ++ T+S +++G+ K Q+E+A +
Sbjct: 550 TPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQ 609
Query: 160 LFYEMPERKD--------------------VSWNIMMGGYGQNGQIEKALDLFRRMPEP- 198
+F M KD V++ ++ G+ ++ ++E+A L M
Sbjct: 610 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 669
Query: 199 -ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVD 243
E N + ++ +I L + G++++AQ +M E + ++++++D
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLID 717
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
+ + CK R + ARK+ D M E + ++D +I+G K G + EA+++ +M+E
Sbjct: 643 GALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE 702
Query: 104 RD----TRLWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIEE 156
++++++ Y + A K+ +V ++ M++G K+ + +E
Sbjct: 703 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 762
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIK 210
A +L M E+ V++ M+ G+G G+IE L+L RM N V++ +I
Sbjct: 763 AYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822
Query: 211 ALVRCGRIEDAQWHFNQMQE 230
+ G ++ A +M++
Sbjct: 823 HCCKNGALDVAHNLLEEMKQ 842
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 99/205 (48%), Gaps = 33/205 (16%)
Query: 48 NSFISRLCKEGRTDHARKVFDQM------PERDMRL--------------WDTMINGYIK 87
++ I CK G+ + A ++F++M P+ DM + +++G+ K
Sbjct: 592 SALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCK 651
Query: 88 CGMIKEARKLFDQMA----ERDTRLWTTMLNGYIECGMIKEARKL---FDGPDAEKSVST 140
++EARKL D M+ E + ++ +++G + G + EA+++ ++ T
Sbjct: 652 SHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYT 711
Query: 141 WSTMVNGYVKINQIEEAERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMP 196
+S++++ Y K+ + + A ++ +M E V + M+ G + G+ ++A L + M
Sbjct: 712 YSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMME 771
Query: 197 EP--ERNVVSWNTIIKALVRCGRIE 219
E + NVV++ +I G+IE
Sbjct: 772 EKGCQPNVVTYTAMIDGFGMIGKIE 796
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/304 (19%), Positives = 128/304 (42%), Gaps = 79/304 (25%)
Query: 19 NTHPLIHGYPFLRTRLASTFSLNTEMKRC---------NSFISRLCKEGRTDHARKVFDQ 69
+T+ + Y +++ F L EMKR + CK G + ARK F++
Sbjct: 484 STYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNE 543
Query: 70 MPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIECGM 121
M E ++ + +I+ Y+K + A +LF+ M + ++ +++G+ + G
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603
Query: 122 IKEARKLF-------DGPDAE------------KSVSTWSTMVNGYVKINQIEEAERLFY 162
+++A ++F D PD + +V T+ +++G+ K +++EEA +L
Sbjct: 604 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663
Query: 163 EMP----ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE---PER--------------- 200
M E + ++ ++ G + G++++A ++ M E P
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723
Query: 201 -------------------NVVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWT 239
NVV + +I L + G+ ++A M+E+ + +V ++T
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 783
Query: 240 TIVD 243
++D
Sbjct: 784 AMID 787
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 96/219 (43%), Gaps = 46/219 (21%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQ-MAERDT 106
N ++ K G AR VFD+M ER++ W+ +I Y+K +KEAR+LF+ ERD
Sbjct: 27 NQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDL 86
Query: 107 RLWTTMLNGYIEC-GMIKEARKLFDGPDAEKSVSTW------STMVNGYVKINQIEEAER 159
+ T+L+G+ + G EA ++F ++ W +TMV K+ + E+
Sbjct: 87 ITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQ 146
Query: 160 LFYEMPERKD-------------------------------------VSWNIMMGGYGQN 182
L + + + V+ N M+ Y +
Sbjct: 147 LHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCRE 206
Query: 183 GQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDA 221
G I+KAL +F R PE + +SWNT+I + G E+A
Sbjct: 207 GDIDKALSVFWRNPEL-NDTISWNTLIAGYAQNGYEEEA 244
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 84/207 (40%), Gaps = 39/207 (18%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPE-RDMRLWDTMINGYIKCGMIKEARKLFDQMAER-- 104
N+ I+ C+EG D A VF + PE D W+T+I GY + G +EA K+ M E
Sbjct: 197 NAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGL 256
Query: 105 --DTRLWTTMLN-----GYIECGMIKEARKLFDGPDAEKSVSTW---------------- 141
D + +LN ++ G AR L +G + K VS+
Sbjct: 257 KWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAES 316
Query: 142 -------------STMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKA 188
S+M+ GY ++ EA+RLF + E+ V W M GY Q +
Sbjct: 317 AHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSV 376
Query: 189 LDLFRRMPEPERNVVSWNTIIKALVRC 215
L+L R E N ++ L C
Sbjct: 377 LELARAFIANETNTPDSLVMVSVLGAC 403
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 49/205 (23%)
Query: 48 NSFISRLCKEGRTDHARKVFDQ-MPERDMRLWDTMINGYIKC-GMIKEARKLFDQMAERD 105
N+ I+ K AR++F+ ERD+ ++T+++G+ K G EA ++F +M ++
Sbjct: 58 NAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKE 117
Query: 106 TR-LW-----------------------------------------TTMLNGYIECGMIK 123
+W +++++ Y +CG K
Sbjct: 118 KDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFK 177
Query: 124 EARKLFDGPDAEKSVSTW-STMVNGYVKINQIEEAERLFYEMPERKD-VSWNIMMGGYGQ 181
E +F+G E S + M+ Y + I++A +F+ PE D +SWN ++ GY Q
Sbjct: 178 EVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQ 237
Query: 182 NGQIEKALDLFRRMPEPERNVVSWN 206
NG E+AL + M E N + W+
Sbjct: 238 NGYEEEALKMAVSM---EENGLKWD 259
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 95/215 (44%), Gaps = 17/215 (7%)
Query: 44 MKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKC----GMIKEARKLF- 98
+ +S I +G+ A+++FD + E+++ +W M GY+ +++ AR
Sbjct: 326 LYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIA 385
Query: 99 DQMAERDTRLWTTMLN-----GYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQ 153
++ D+ + ++L Y+E G L G +K + T V+ Y K
Sbjct: 386 NETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVT--AFVDMYSKCGN 443
Query: 154 IEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKA 211
+E AER+F ER V +N M+ G +G K+ F M E + + +++ ++ A
Sbjct: 444 VEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSA 503
Query: 212 LVRCGRIEDAQWHFNQMQERER---DVSSWTTIVD 243
G + + + +F M E + +T ++D
Sbjct: 504 CRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMID 538
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 70/150 (46%), Gaps = 16/150 (10%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG-- 131
D +L ++ Y KCG ++ A ++FD ERDT ++ M+ G G ++ + F+
Sbjct: 427 DKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMT 486
Query: 132 -----PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS-----WNIMMGGYGQ 181
PD T+ +++ + E E+ F M E ++S + M+ YG+
Sbjct: 487 EGGFKPDE----ITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGK 542
Query: 182 NGQIEKALDLFRRMPEPERNVVSWNTIIKA 211
+++KA++L + + E++ V + A
Sbjct: 543 AYRLDKAIELMEGIDQVEKDAVILGAFLNA 572
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 106/199 (53%), Gaps = 19/199 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAE 103
++ I LCK D A +F +M + +R + ++I+ G +A +L M E
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE 316
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
R + ++ +++ +++ G + +A KL++ + ++ T+S+++NG+ ++++ E
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Query: 157 AERLFYEMPERKD-----VSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTII 209
A+++ E+ RKD V++N ++ G+ + +++K ++LFR M + N V++ T+I
Sbjct: 377 AKQML-ELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Query: 210 KALVRCGRIEDAQWHFNQM 228
+ ++AQ F QM
Sbjct: 436 HGFFQARDCDNAQMVFKQM 454
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 107/222 (48%), Gaps = 52/222 (23%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
+S IS LC GR A ++ M ER ++ + +I+ ++K G + +A KL+++M +
Sbjct: 292 SSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIK 351
Query: 104 R--DTRLWT--TMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
R D ++T +++NG+ + EA+++ + D +V T++T++NG+ K ++++
Sbjct: 352 RSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDK 411
Query: 157 AERLFYEMPERKDV---------------------------------------SWNIMMG 177
LF EM +R V ++NI++
Sbjct: 412 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 471
Query: 178 GYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGR 217
G +NG++ KA+ +F + E ++ ++N +I+ + + G+
Sbjct: 472 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 119/249 (47%), Gaps = 31/249 (12%)
Query: 23 LIHGYPFLRTRLASTFSLNTEM--KRC-------NSFISRLCKEGRTDHARKVFDQMP-- 71
LIHG FL + + +L M + C + ++ LCK G TD A + ++M
Sbjct: 189 LIHGL-FLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAA 247
Query: 72 --ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIEC----GMIKEA 125
E ++ ++ T+I+ K +A LF +M + R + I C G +A
Sbjct: 248 KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDA 307
Query: 126 RKLFDGPDAEK---SVSTWSTMVNGYVKINQIEEAERLFYEMPERK----DVSWNIMMGG 178
+L K ++ T+S +++ +VK ++ +AE+L+ EM +R +++ ++ G
Sbjct: 308 SRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLING 367
Query: 179 Y---GQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERER-- 233
+ + G+ ++ L+L R + NVV++NT+I + R++ F +M +R
Sbjct: 368 FCMLDRLGEAKQMLELMIR-KDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVG 426
Query: 234 DVSSWTTIV 242
+ ++TT++
Sbjct: 427 NTVTYTTLI 435
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 15/187 (8%)
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIECGMIKEARK 127
E D+ ++++NG+ I +A L DQM E DT +TT+++G EA
Sbjct: 145 EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVA 204
Query: 128 LFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMP----ERKDVSWNIMMGGYG 180
L D + + T+ +VNG K + A L +M E V ++ ++
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 264
Query: 181 QNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE--RDVS 236
+ + AL+LF M NV++++++I L GR DA + M ER+ ++
Sbjct: 265 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 324
Query: 237 SWTTIVD 243
+++ ++D
Sbjct: 325 TFSALID 331
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 19/213 (8%)
Query: 50 FISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAER- 104
I LC+ GR + A + DQM E+ R + +I G+I +A LFD+M R
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG 331
Query: 105 ---DTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNGYVKINQIEEAE 158
+ +T +++G G I+EA + ++ SV T++ ++NGY K ++ A
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAF 391
Query: 159 RLFYEMPERK---DV-SWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKAL 212
L M +R +V ++N +M G + G+ KA+ L +RM + ++VS+N +I L
Sbjct: 392 ELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGL 451
Query: 213 VRCGRIEDAQWHFNQMQ--ERERDVSSWTTIVD 243
R G + A + M + E D ++T I++
Sbjct: 452 CREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 118/239 (49%), Gaps = 26/239 (10%)
Query: 29 FLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER-----DMRLWDTMIN 83
F+ L F L++ + S + C+ A KVFD M + + + +I+
Sbjct: 217 FMSKILKIGFVLDSHIG--TSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIH 274
Query: 84 GYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDG--PDAEK- 136
G + G ++EA L DQM E+ TR +T ++ + G+I +A LFD P K
Sbjct: 275 GLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKP 334
Query: 137 SVSTWSTMVNGYVKINQIEEAERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLF 192
+V T++ +++G + +IEEA + +M + + +++N ++ GY ++G++ A +L
Sbjct: 335 NVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELL 394
Query: 193 ----RRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
+R +P NV ++N +++ L R G+ A +M + D+ S+ ++D L
Sbjct: 395 TVMEKRACKP--NVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGL 451
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 84/167 (50%), Gaps = 19/167 (11%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA--ERD 105
+ I +CK G+T A + + + + MR+ T + + M+ + K+ +++A +
Sbjct: 515 TTLIDGVCKVGKTRDALFILETLVK--MRILTTPHSLNVILDMLSKGCKVKEELAMLGKI 572
Query: 106 TRL--------WTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQI 154
+L +TT+++G I G I + ++ + +V ++ ++NG + ++
Sbjct: 573 NKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRV 632
Query: 155 EEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPE 197
EEAE+L M + V++ +M+ GY NG++++AL+ R M E
Sbjct: 633 EEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVE 679
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 19/193 (9%)
Query: 37 TFSLNTEMKRCNSFISRL--CKEGRTDH--ARKVFDQMPER-DMRLWDTMINGYIKCGMI 91
T L ++ C S I+ CK DH AR VF+ R D+ +W+++++GY K M
Sbjct: 32 TLGLRRDVVLCKSLINVYFTCK----DHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMF 87
Query: 92 KEARKLFDQMAE-----RDTRLWTTMLNGYIECG---MIKEARKLFDGPDAEKSVSTWST 143
+ ++F ++ D+ + ++ Y G + + L V S+
Sbjct: 88 HDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASS 147
Query: 144 MVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERN 201
+V Y K N E + ++F EMPER SWN ++ + Q+G+ EKAL+LF RM E N
Sbjct: 148 LVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPN 207
Query: 202 VVSWNTIIKALVR 214
VS I A R
Sbjct: 208 SVSLTVAISACSR 220
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 110/235 (46%), Gaps = 19/235 (8%)
Query: 23 LIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMI 82
IHGY +R+ + + +N S I K G + A VF + + W+ MI
Sbjct: 330 FIHGY-VIRSVVNADIYVNC------SLIDLYFKCGEANLAETVFSKTQKDVAESWNVMI 382
Query: 83 NGYIKCGMIKEARKLFDQM----AERDTRLWTTMLNGYIECGMIKEARKL---FDGPDAE 135
+ YI G +A +++DQM + D +T++L + +++ +++ E
Sbjct: 383 SSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLE 442
Query: 136 KSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
S +++ Y K +EA R+F +P++ VSW +M+ YG +GQ +AL F M
Sbjct: 443 TDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEM 502
Query: 196 PE--PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER---ERDVSSWTTIVDCL 245
+ + + V+ ++ A G I++ F+QM+ + E + ++ ++D L
Sbjct: 503 QKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDIL 557
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 92/179 (51%), Gaps = 12/179 (6%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA----E 103
+S + K +++ +VFD+MPERD+ W+T+I+ + + G ++A +LF +M E
Sbjct: 146 SSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFE 205
Query: 104 RDTRLWTTMLNG-----YIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAE 158
++ T ++ ++E G + + G + ++ V+ S +V+ Y K + +E A
Sbjct: 206 PNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVN--SALVDMYGKCDCLEVAR 263
Query: 159 RLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGR 217
+F +MP + V+WN M+ GY G + +++ RM E S T+ L+ C R
Sbjct: 264 EVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMI-IEGTRPSQTTLTSILMACSR 321
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 73 RDMRLWDTMINGYIKCGMIKEARKLFDQMAER-DTRLWTTMLNGYIECGMIKEARKLFD- 130
RD+ L ++IN Y C AR +F+ R D +W ++++GY + M + ++F
Sbjct: 37 RDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKR 96
Query: 131 -------GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNI-----MMGG 178
PD+ T+ ++ Y + + E R+ + + + ++ ++G
Sbjct: 97 LLNCSICVPDS----FTFPNVIKAYGALGR-EFLGRMIHTLVVKSGYVCDVVVASSLVGM 151
Query: 179 YGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
Y + E +L +F MPE R+V SWNT+I + G E A F +M+
Sbjct: 152 YAKFNLFENSLQVFDEMPE--RDVASWNTVISCFYQSGEAEKALELFGRME 200
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 16/152 (10%)
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD- 130
E D L +++ Y KCG KEA ++F+ + ++D WT M++ Y G +EA FD
Sbjct: 442 ETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDE 501
Query: 131 ------GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS-----WNIMMGGY 179
PD ++ S G+ + I+E + F +M + + ++ M+
Sbjct: 502 MQKFGLKPDGVTLLAVLSAC--GHAGL--IDEGLKFFSQMRSKYGIEPIIEHYSCMIDIL 557
Query: 180 GQNGQIEKALDLFRRMPEPERNVVSWNTIIKA 211
G+ G++ +A ++ ++ PE N +T+ A
Sbjct: 558 GRAGRLLEAYEIIQQTPETSDNAELLSTLFSA 589
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 85/165 (51%), Gaps = 15/165 (9%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF---D 130
D+ + +++ Y K + + + ++FD+M ERD W T+++ + + G ++A +LF +
Sbjct: 141 DVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRME 200
Query: 131 GPDAEKSVSTWSTMVNGYVKINQIEEAERLF-------YEMPERKDVSWNIMMGGYGQNG 183
E + + + ++ ++ +E + + +E+ E + + ++ YG+
Sbjct: 201 SSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVN---SALVDMYGKCD 257
Query: 184 QIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
+E A ++F++MP +++V+WN++IK V G + N+M
Sbjct: 258 CLEVAREVFQKMPR--KSLVAWNSMIKGYVAKGDSKSCVEILNRM 300
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 38/178 (21%)
Query: 81 MINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF-----DGPD-- 133
++N Y+KCG + A+++FDQMA + T ++ GY + G ++A KLF +G +
Sbjct: 225 IVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWD 284
Query: 134 -------------------------------AEKSVSTWSTMVNGYVKINQIEEAERLFY 162
E VS + +V+ Y+K + E A R F
Sbjct: 285 SFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQ 344
Query: 163 EMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIED 220
E+ E DVSW+ ++ GY Q Q E+A+ F+ + ++++ T C + D
Sbjct: 345 EIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLAD 402
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 122/282 (43%), Gaps = 57/282 (20%)
Query: 13 MHAHKLNTH-PLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRT-DHARKVFDQM 70
+H L+ H L + FL+ + S+++ +C + C+E R+ H R + D+M
Sbjct: 53 LHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQC---LFEACRELRSLSHGRLLHDRM 109
Query: 71 ----PERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEAR 126
+ L + ++ Y +C +++A KLFD+M+E + TTM++ Y E G++ +A
Sbjct: 110 RMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAV 169
Query: 127 KLFDGPDAE--------------------------------------KSVSTWSTMVNGY 148
LF G A + S + +VN Y
Sbjct: 170 GLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMY 229
Query: 149 VKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTI 208
VK + A+R+F +M +K V+ +M GY Q G+ AL LF + V W++
Sbjct: 230 VKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEG---VEWDSF 286
Query: 209 IKALV--RCGRIED----AQWHFNQMQ-ERERDVSSWTTIVD 243
+ ++V C +E+ Q H + E +VS T +VD
Sbjct: 287 VFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVD 328
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 21/146 (14%)
Query: 80 TMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS 139
+I Y KCG + +A ++F+ M D WT ++G+ G EA +LF EK VS
Sbjct: 427 ALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLF-----EKMVS 481
Query: 140 --------TWSTMVNGYVKINQIEEAERLFYEMPERKDVS-----WNIMMGGYGQNGQIE 186
T+ ++ +E+ + M + +V+ ++ M+ Y ++G ++
Sbjct: 482 CGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLD 541
Query: 187 KALDLFRRMP-EPERNVVSWNTIIKA 211
+AL + MP EP + +SW +
Sbjct: 542 EALKFMKNMPFEP--DAMSWKCFLSG 565
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 64/140 (45%), Gaps = 9/140 (6%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA----E 103
++ I+ K G D A +VF+ M D+ W I+G+ G EA +LF++M +
Sbjct: 426 SALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMK 485
Query: 104 RDTRLWTTMLNGYIECGMIKEARKLFDG----PDAEKSVSTWSTMVNGYVKINQIEEAER 159
++ + +L G++++ + D + ++ + M++ Y + ++EA +
Sbjct: 486 PNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALK 545
Query: 160 LFYEMPERKD-VSWNIMMGG 178
MP D +SW + G
Sbjct: 546 FMKNMPFEPDAMSWKCFLSG 565
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 16/217 (7%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
IHG +R+ + T + RC S G + A KVFD+MP RD+ W+ MI
Sbjct: 129 IHG-SVIRSGFLDDAIVATSLVRCYS------ANGSVEIASKVFDEMPVRDLVSWNVMIC 181
Query: 84 GYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIECGMIKEA---RKLFDGPDAEK 136
+ G+ +A ++ +M D+ +L+ + ++ E
Sbjct: 182 CFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCES 241
Query: 137 SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP 196
V + +++ Y K +E A +F M +R ++WN M+ GYG +G +A+ FR+M
Sbjct: 242 CVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMV 301
Query: 197 EP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER 231
N +++ ++ G +++ HF M +
Sbjct: 302 ASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQ 338
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 44/215 (20%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGY- 116
G D A+K+F ++P+RD+ W+++I G ++ G + A KLFD+M +++ W M++ Y
Sbjct: 167 GALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYL 226
Query: 117 ------IECGMIKE-ARKLFDGPDA------------------------------EKSVS 139
+ + +E R F G ++ SV
Sbjct: 227 GANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVV 286
Query: 140 TWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE-- 197
+ +++ Y K ++ A R+F + R V+WN+M+ + +G+ E L+LF M
Sbjct: 287 IDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGM 346
Query: 198 --PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
P+ V++ ++ R G + Q +++ M +
Sbjct: 347 LRPDE--VTFVGVLCGCARAGLVSQGQSYYSLMVD 379
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 98/206 (47%), Gaps = 12/206 (5%)
Query: 49 SFISRLC--KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
S I + C G+ H + + ++ + + +++++ Y CG + A+KLF ++ +RD
Sbjct: 126 SCIEKTCCVDSGKMCHGQAI-KHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDI 184
Query: 107 RLWTTMLNGYIECGMIKEARKLFDG-PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMP 165
W +++ G + G + A KLFD PD K++ +W+ M++ Y+ N + LF EM
Sbjct: 185 VSWNSIIAGMVRNGDVLAAHKLFDEMPD--KNIISWNIMISAYLGANNPGVSISLFREMV 242
Query: 166 ----ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERN--VVSWNTIIKALVRCGRIE 219
+ + + +++ G++ ++++ + + N VV +I +C +
Sbjct: 243 RAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVG 302
Query: 220 DAQWHFNQMQERERDVSSWTTIVDCL 245
A+ F+ + R + + + CL
Sbjct: 303 LARRIFDSLSIRNKVTWNVMILAHCL 328
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 115/285 (40%), Gaps = 71/285 (24%)
Query: 12 LMHAHKLNTHPLIHGY---PFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFD 68
L A +++ H L +G PFL T+L +S G D+ARKVFD
Sbjct: 93 LSDALRVHRHILDNGSDQDPFLATKLIGMYS----------------DLGSVDYARKVFD 136
Query: 69 QMPERDMRLWDTMINGYIKCGMIKEARKLFDQM----AERDTRLWTTMLNGYI--ECGM- 121
+ +R + +W+ + G +E L+ +M E D +T +L + EC +
Sbjct: 137 KTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVN 196
Query: 122 ----IKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMG 177
KE V +T+V+ Y + ++ A +F MP R VSW+ M+
Sbjct: 197 HLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIA 256
Query: 178 GYGQNGQIEKALDLFRRM------PEPE-----------------------------RNV 202
Y +NG+ +AL FR M P R +
Sbjct: 257 CYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGL 316
Query: 203 VSWNTIIKALV----RCGRIEDAQWHFNQMQERERDVSSWTTIVD 243
S +I ALV RCG++E Q F++M +RDV SW +++
Sbjct: 317 DSILPVISALVTMYGRCGKLEVGQRVFDRMH--DRDVVSWNSLIS 359
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 92/197 (46%), Gaps = 21/197 (10%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
+ + + G D+A VF MP R++ W MI Y K G EA + F +M R+T+
Sbjct: 221 TTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMM-RETK 279
Query: 108 LWT----TMLNGYIECGMIK--EARKLFDGPDAEKSVSTW----STMVNGYVKINQIEEA 157
+ TM++ C + E KL G + + + S +V Y + ++E
Sbjct: 280 DSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVG 339
Query: 158 ERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM------PEPERNVVSWNTIIKA 211
+R+F M +R VSWN ++ YG +G +KA+ +F M P P V++ +++ A
Sbjct: 340 QRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTP----VTFVSVLGA 395
Query: 212 LVRCGRIEDAQWHFNQM 228
G +E+ + F M
Sbjct: 396 CSHEGLVEEGKRLFETM 412
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 103/247 (41%), Gaps = 53/247 (21%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCG-------MIKEARKLFDQ 100
N I LCKEG+ A +V Q + ++ +I + CG ++ R + D
Sbjct: 50 NQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLI---LCCGHRSSLSDALRVHRHILDN 106
Query: 101 MAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNG------------- 147
+++D L T ++ Y + G + ARK+FD ++++ W+ +
Sbjct: 107 GSDQDPFLATKLIGMYSDLGSVDYARKVFD-KTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 148 YVKINQIE-EAERLFY---------------EMPERKDVSWNIMMGGYGQNGQIEKAL-D 190
Y K+N+I E++R Y + + K++ ++ GY + I L D
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVD 225
Query: 191 LFRRMP-----------EPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVS-SW 238
++ R P RNVVSW+ +I + G+ +A F +M +D S +
Sbjct: 226 MYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNS 285
Query: 239 TTIVDCL 245
T+V L
Sbjct: 286 VTMVSVL 292
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 98/222 (44%), Gaps = 14/222 (6%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
L+ ++ + I K G AR++FD +D+ W+ MI+ Y K G+++E L
Sbjct: 256 IGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWL 315
Query: 98 FDQMAERDTRLWTTMLNGYIECGMIKEA----RKLFDGPDAEK---SVSTWSTMVNGYVK 150
QM + ++ G + EA R + D + E+ + +V+ Y K
Sbjct: 316 LRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAK 375
Query: 151 INQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNV----VSWN 206
+ +E+A +F M ++ SW M+ GYG +G +A+ LF +M E V +++
Sbjct: 376 VGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFL 435
Query: 207 TIIKALVRCGRIEDAQWHFNQMQERER---DVSSWTTIVDCL 245
++ A G + + F +M E V + +VD L
Sbjct: 436 VVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLL 477
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 15/213 (7%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHA-RKVFDQMPERDMRLWDTMINGYIKCGMIKEARK 96
FS T +K C+ + EG A R F M D+R + +I+ Y CG I +ARK
Sbjct: 126 FSFITTLKSCSRELCVSIGEGLHGIALRSGF--MVFTDLR--NALIHFYCVCGKISDARK 181
Query: 97 LFDQMAER-DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQI- 154
+FD+M + D ++T++NGY++ A LF + V ST+++ I+ +
Sbjct: 182 VFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLG 241
Query: 155 -----EEAERLFYEMPERKDVSW-NIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTI 208
E A L ++ D+ ++G YG+ G I A +F ++VV+WN +
Sbjct: 242 DLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFD--CAIRKDVVTWNCM 299
Query: 209 IKALVRCGRIEDAQWHFNQMQERERDVSSWTTI 241
I + G +E+ W QM+ + +S T +
Sbjct: 300 IDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFV 332
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 15/163 (9%)
Query: 63 ARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIE 118
R V D + E D L +++ Y K G++++A ++F++M ++D + WT M++GY
Sbjct: 347 GRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGA 406
Query: 119 CGMIKEARKLFDGPDAEKSVS-----TWSTMVNGYVKINQIEEAERLFYEMPERKDVS-- 171
G+ +EA LF+ + E T+ ++N + E R F M E +
Sbjct: 407 HGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPK 466
Query: 172 ---WNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKA 211
+ ++ G+ GQ+E+A +L R +P + +W ++ A
Sbjct: 467 VEHYGCVVDLLGRAGQLEEAYELIRNLP-ITSDSTAWRALLAA 508
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 74/161 (45%), Gaps = 11/161 (6%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
+ + K G + A ++F++M ++D++ W MI+GY G+ +EA LF++M E + +
Sbjct: 367 TALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCK 426
Query: 108 L------WTTMLNGYIECGMIKEA----RKLFDGPDAEKSVSTWSTMVNGYVKINQIEEA 157
+ + +LN G++ E +++ + V + +V+ + Q+EEA
Sbjct: 427 VRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEA 486
Query: 158 ERLFYEMPERKD-VSWNIMMGGYGQNGQIEKALDLFRRMPE 197
L +P D +W ++ G + + R+ E
Sbjct: 487 YELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAE 527
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 105/249 (42%), Gaps = 24/249 (9%)
Query: 12 LMHAHKLNTHPL----IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVF 67
L+ K PL IHG R ++ +L+ S I D A V
Sbjct: 334 LLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALS-------SLIDAYTSCSLVDDAGTVL 386
Query: 68 DQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEAR- 126
D M +D+ TMI+G G EA +F M RDT T+++ C + + R
Sbjct: 387 DSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHM--RDTPNAITVISLLNACSVSADLRT 444
Query: 127 -KLFDGPDAEKS-----VSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYG 180
K G +S +S +++V+ Y K IE A R F ++ E+ +SW +++ Y
Sbjct: 445 SKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYA 504
Query: 181 QNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERER--DVS 236
NG +KAL LF M + N V++ + A G ++ F M E + +
Sbjct: 505 INGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQ 564
Query: 237 SWTTIVDCL 245
++ IVD L
Sbjct: 565 HYSCIVDML 573
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 114/277 (41%), Gaps = 74/277 (26%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDH--ARKVFDQMPERDMRLWDTM 81
IHGY +R+ S+ + LC +D ARK+FD+M ERD+ W +
Sbjct: 147 IHGY-VIRSGFCGISSVQNSI---------LCMYADSDSLSARKLFDEMSERDVISWSVV 196
Query: 82 INGYIKCGMIKEARKLFDQMA-----ERDTRLWTTMLNGYIECGMIKEA----------- 125
I Y++ KLF +M E D T++L C ++++
Sbjct: 197 IRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKA---CTVMEDIDVGRSVHGFSI 253
Query: 126 RKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQI 185
R+ FD D V +++++ Y K ++ A R+F E R VSWN ++ G+ N +
Sbjct: 254 RRGFDLAD----VFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRY 309
Query: 186 EKALDLFRRM------------------------PEP-------------ERNVVSWNTI 208
++AL++F M P P E N V+ +++
Sbjct: 310 DEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSL 369
Query: 209 IKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
I A C ++DA + M +DV S +T++ L
Sbjct: 370 IDAYTSCSLVDDAGTVLDSMT--YKDVVSCSTMISGL 404
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 107/269 (39%), Gaps = 66/269 (24%)
Query: 24 IHGYPFLRT-RLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMI 82
+HG+ R LA F CNS I K D A +VFD+ R++ W++++
Sbjct: 248 VHGFSIRRGFDLADVFV-------CNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSIL 300
Query: 83 NGYIKCGMIKEARKLFDQMAERDTRL-WTTMLNGYIECGMIKEARKLFDGPDAEKSVS-- 139
G++ EA ++F M + + T+++ C K F+ P KS+
Sbjct: 301 AGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVC-------KFFEQPLPCKSIHGV 353
Query: 140 -----------TWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKA 188
S++++ Y + +++A + M + VS + M+ G G+ ++A
Sbjct: 354 IIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEA 413
Query: 189 LDLFRRMPEPERNVV-----------------SW------------------NTIIKALV 213
+ +F M + + W +I+ A
Sbjct: 414 ISIFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYA 473
Query: 214 RCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+CG IE A+ F+Q+ E+++ SWT I+
Sbjct: 474 KCGAIEMARRTFDQIT--EKNIISWTVII 500
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 90/218 (41%), Gaps = 53/218 (24%)
Query: 43 EMKRCNSFISRLCKEGRTDHARKVFDQMPE------------------------------ 72
++ C++ IS L GR+D A +F M +
Sbjct: 393 DVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIA 452
Query: 73 -------RDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEA 125
D+ + ++++ Y KCG I+ AR+ FDQ+ E++ WT +++ Y G+ +A
Sbjct: 453 IRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKA 512
Query: 126 RKLFD-------GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKD----VSWNI 174
LFD P+A ++ S +G +++ +F M E ++
Sbjct: 513 LALFDEMKQKGYTPNAVTYLAALSACNHG----GLVKKGLMIFKSMVEEDHKPSLQHYSC 568
Query: 175 MMGGYGQNGQIEKALDLFRRMPEPERNVVS-WNTIIKA 211
++ + G+I+ A++L + +PE + S W I+
Sbjct: 569 IVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSG 606
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 16/171 (9%)
Query: 18 LNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRL 77
L T HG R+ + S+ T S + K G + AR+ FDQ+ E+++
Sbjct: 442 LRTSKWAHGIAIRRSLAINDISVGT------SIVDAYAKCGAIEMARRTFDQITEKNIIS 495
Query: 78 WDTMINGYIKCGMIKEARKLFDQMAERD-TRLWTTMLNGYIEC---GMIKEARKLFDG-- 131
W +I+ Y G+ +A LFD+M ++ T T L C G++K+ +F
Sbjct: 496 WTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMV 555
Query: 132 -PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV---SWNIMMGG 178
D + S+ +S +V+ + +I+ A L +PE +W ++ G
Sbjct: 556 EEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSG 606
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 12/214 (5%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
F++++ + C+ + + G+ HA + + + + + +++ Y C + R++
Sbjct: 303 FTISSVLPACSHL--EMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRV 360
Query: 98 FDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYV-------K 150
FD M +R LW M+ GY + KEA LF G + + ST + G V
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420
Query: 151 INQIEEAERLFYEMP-ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTII 209
++ E + +R N +M Y + G+I+ A+ +F +M +R++V+WNT+I
Sbjct: 421 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM--EDRDLVTWNTMI 478
Query: 210 KALVRCGRIEDAQWHFNQMQERERDVSSWTTIVD 243
V EDA ++MQ ER VS + V
Sbjct: 479 TGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS 512
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 109/245 (44%), Gaps = 30/245 (12%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
IHG+ R F NT M SRL G+ D A ++F +M +RD+ W+TMI
Sbjct: 427 IHGFVVKRGLDRDRFVQNTLM----DMYSRL---GKIDIAMRIFGKMEDRDLVTWNTMIT 479
Query: 84 GYIKCGMIKEARKLFDQMAERDTRLW------------TTMLNGYIECGMI------KEA 125
GY+ ++A L +M + ++ T++ C + KE
Sbjct: 480 GYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI 539
Query: 126 RKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQI 185
+ V+ S +V+ Y K ++ + ++F ++P++ ++WN+++ YG +G
Sbjct: 540 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNG 599
Query: 186 EKALDLFRRM--PEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER---ERDVSSWTT 240
++A+DL R M + N V++ ++ A G +++ F M+ E +
Sbjct: 600 QEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYAC 659
Query: 241 IVDCL 245
+VD L
Sbjct: 660 VVDLL 664
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 100/234 (42%), Gaps = 23/234 (9%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
+H Y + L S F +NT ++ K G+ ++ + RD+ W+T+++
Sbjct: 224 VHAYGLRKGELNS-FIINT-------LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLS 275
Query: 84 GYIKCGMIKEARKLFDQM----AERDTRLWTTMLNGYIECGMIKEARKLF-----DGPDA 134
+ + EA + +M E D +++L M++ ++L +G
Sbjct: 276 SLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLD 335
Query: 135 EKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRR 194
E S S +V+ Y Q+ R+F M +RK WN M+ GY QN ++AL LF
Sbjct: 336 ENSF-VGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIG 394
Query: 195 MPEPE---RNVVSWNTIIKALVRCGRI--EDAQWHFNQMQERERDVSSWTTIVD 243
M E N + ++ A VR G ++A F + +RD T++D
Sbjct: 395 MEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMD 448
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 97/210 (46%), Gaps = 11/210 (5%)
Query: 36 STFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEAR 95
++ +L T + C + +S L K G+ HA + + + D+ + +++ Y KCG ++ +R
Sbjct: 516 NSITLMTILPSCAA-LSALAK-GKEIHAYAIKNNLAT-DVAVGSALVDMYAKCGCLQMSR 572
Query: 96 KLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQ-- 153
K+FDQ+ +++ W ++ Y G +EA L + T ++ + +
Sbjct: 573 KVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSG 632
Query: 154 -IEEAERLFYEMPERKDVS-----WNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNT 207
++E R+FY M V + ++ G+ G+I++A L MP +W++
Sbjct: 633 MVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSS 692
Query: 208 IIKALVRCGRIEDAQWHFNQMQERERDVSS 237
++ A +E + + + E +V+S
Sbjct: 693 LLGASRIHNNLEIGEIAAQNLIQLEPNVAS 722
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 101/232 (43%), Gaps = 52/232 (22%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTML 113
G A KVF++MP+ D+ W MI + + G EA LF +M E + +++L
Sbjct: 296 GDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSIL 355
Query: 114 NGYI--EC-GMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV 170
NG +C G+ ++ L + + + +++ Y K +++ A +LF E+ + +V
Sbjct: 356 NGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEV 415
Query: 171 SWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSW------------------------- 205
SWN ++ GY G+ KA +FR E RN VS
Sbjct: 416 SWNTVIVGYENLGEGGKAFSMFR---EALRNQVSVTEVTFSSALGACASLASMDLGVQVH 472
Query: 206 ---------------NTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
N++I +CG I+ AQ FN+M+ DV+SW ++
Sbjct: 473 GLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME--TIDVASWNALI 522
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 85/204 (41%), Gaps = 9/204 (4%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE 93
L + ++ N+ I K + D A K+F ++ ++ W+T+I GY G +
Sbjct: 373 LVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGK 432
Query: 94 ARKLFDQMAERDTRLW-TTMLNGYIECGMIK------EARKLFDGPDAEKSVSTWSTMVN 146
A +F + + T + C + + L + K V+ +++++
Sbjct: 433 AFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLID 492
Query: 147 GYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVS 204
Y K I+ A+ +F EM SWN ++ GY +G +AL + M + + N ++
Sbjct: 493 MYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLT 552
Query: 205 WNTIIKALVRCGRIEDAQWHFNQM 228
+ ++ G I+ Q F M
Sbjct: 553 FLGVLSGCSNAGLIDQGQECFESM 576
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 67/138 (48%), Gaps = 9/138 (6%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS I K G A+ VF++M D+ W+ +I+GY G+ ++A ++ D M +RD +
Sbjct: 488 NSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCK 547
Query: 108 ----LWTTMLNGYIECGMIKEARKLFDG----PDAEKSVSTWSTMVNGYVKINQIEEAER 159
+ +L+G G+I + ++ F+ E + ++ MV + Q+++A +
Sbjct: 548 PNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMK 607
Query: 160 LFYEMPERKDVS-WNIMM 176
L +P V W M+
Sbjct: 608 LIEGIPYEPSVMIWRAML 625
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 109/213 (51%), Gaps = 21/213 (9%)
Query: 37 TFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIK 92
+F + + CN + LCK+ + A KV D++P ++ + T++ GY+ G ++
Sbjct: 184 SFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDME 243
Query: 93 EARKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMV 145
A+++ ++M +R D +T +++GY + G EA + D + E + T+ M+
Sbjct: 244 SAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMI 303
Query: 146 NGYVKINQIEEAERLFYEMPERK---DVSWNI-MMGGYGQNGQIEKALDLFRRMPE---- 197
K + EA +F EM ER D S ++ ++ ++++A L+R+M +
Sbjct: 304 RALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCM 363
Query: 198 PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
P+ ++S T+I L + GR+ +A+ F++ ++
Sbjct: 364 PDNALLS--TLIHWLCKEGRVTEARKLFDEFEK 394
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 20/189 (10%)
Query: 51 ISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEA----RKLFDQMA 102
I LCKE ++ AR +FD+M ER D L +I+ + + EA RK+
Sbjct: 303 IRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNC 362
Query: 103 ERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEK----SVSTWSTMVNGYVKINQIEEAE 158
D L +T+++ + G + EARKLFD + EK S+ T++T++ G + ++ EA
Sbjct: 363 MPDNALLSTLIHWLCKEGRVTEARKLFD--EFEKGSIPSLLTYNTLIAGMCEKGELTEAG 420
Query: 159 RLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIKAL 212
RL+ +M ERK ++N+++ G +NG +++ + + M E N ++ + + L
Sbjct: 421 RLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGL 480
Query: 213 VRCGRIEDA 221
+ G+ EDA
Sbjct: 481 QKLGKEEDA 489
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 51/233 (21%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
K GR AR +FD MP R+ W+TM++G ++ G+ E + F +M + + + ++
Sbjct: 4 KFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIAS 63
Query: 116 YI-ECG----MIKEARKLF-----DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMP 165
+ CG M +E ++ G ++ VST +++ Y + + ++F EMP
Sbjct: 64 LVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVST--AILHLYGVYGLVSCSRKVFEEMP 121
Query: 166 ERKDVSWNIMMGGYGQNGQIEKALDLFRRM------------------------------ 195
+R VSW +M GY G+ E+ +D+++ M
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 181
Query: 196 -------PEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTI 241
E + N++I L G ++ A + F+QM ERD SW +I
Sbjct: 182 IIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS--ERDTISWNSI 232
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
CN+ + GR+ A VF QMP +D+ W++++ ++ G +A L M
Sbjct: 299 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 358
Query: 107 RL----WTTMLNG-----YIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEA 157
+ +T+ L + E G I + G + + + +V+ Y KI ++ E+
Sbjct: 359 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG--NALVSMYGKIGEMSES 416
Query: 158 ERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRC 215
R+ +MP R V+WN ++GGY ++ +KAL F+ M E ++ T++ L C
Sbjct: 417 RRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTM-RVEGVSSNYITVVSVLSAC 473
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 12/185 (6%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
L +++ NS IS L G D+A +FDQM ERD W+++ Y + G I+E+ ++F
Sbjct: 191 LESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFS 250
Query: 100 QM----AERDTRLWTTMLNGYIECGMIKEARKLFD-----GPDAEKSVSTWSTMVNGYVK 150
M E ++ +T+L+ K R + G D+ V +T++ Y
Sbjct: 251 LMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS--VVCVCNTLLRMYAG 308
Query: 151 INQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIK 210
+ EA +F +MP + +SWN +M + +G+ AL L M ++ V++ T
Sbjct: 309 AGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS-VNYVTFTS 367
Query: 211 ALVRC 215
AL C
Sbjct: 368 ALAAC 372
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 85/175 (48%), Gaps = 12/175 (6%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYI 117
G +RKVF++MP+R++ W +++ GY G +E ++ M ++ I
Sbjct: 108 GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVI 167
Query: 118 E-CGMIKE---ARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV 170
CG++K+ R++ E ++ +++++ + ++ A +F +M ER +
Sbjct: 168 SSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTI 227
Query: 171 SWNIMMGGYGQNGQIEKALDLFRRMP--EPERNVVSWNTIIKALVRCGRIEDAQW 223
SWN + Y QNG IE++ +F M E N + +T++ L G ++ +W
Sbjct: 228 SWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVL---GHVDHQKW 279
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM-AERDT 106
N+ +S K G +R+V QMP RD+ W+ +I GY + +A F M E +
Sbjct: 401 NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVS 460
Query: 107 RLWTTMLNGYIEC---------GMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEA 157
+ T+++ C G A + G ++++ V ++++ Y K + +
Sbjct: 461 SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVK--NSLITMYAKCGDLSSS 518
Query: 158 ERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
+ LF + R ++WN M+ +G E+ L L +M
Sbjct: 519 QDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 556
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 108/244 (44%), Gaps = 29/244 (11%)
Query: 14 HAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKV---FDQM 70
H LN +H F A FSL +K C + + G + HA V F
Sbjct: 28 HEQALNLFLQMHS-SFALPLDAHVFSL--ALKSCAAAFRPVL--GGSVHAHSVKSNFLSN 82
Query: 71 PERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD 130
P L D Y KC + ARKLFD++ +R+ +W M++ Y CG +KEA +L++
Sbjct: 83 PFVGCALLDM----YGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYE 138
Query: 131 GPDAEKSVSTWSTMVNGYVKINQIEEAERLFY-EMPERKD----------VSWNIMMGGY 179
D + S+++ ++ G V FY +M E + VS +G +
Sbjct: 139 AMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAF 198
Query: 180 GQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWT 239
+I FR + EP + S +++A RCG I Q F+ M+ +RDV +W+
Sbjct: 199 RLIKEIHSY--AFRNLIEPHPQLKS--GLVEAYGRCGSIVYVQLVFDSME--DRDVVAWS 252
Query: 240 TIVD 243
+++
Sbjct: 253 SLIS 256
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 101/242 (41%), Gaps = 31/242 (12%)
Query: 16 HKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDM 75
H LI +P L++ L + RC S + + + VFD M +RD+
Sbjct: 205 HSYAFRNLIEPHPQLKSGLVEAYG------RCGSIV----------YVQLVFDSMEDRDV 248
Query: 76 RLWDTMINGYIKCGMIKEARKLFDQM----AERDTRLWTTMLNGYIECGMIKEARKLFDG 131
W ++I+ Y G + A K F +M D + +L G+ EA F
Sbjct: 249 VAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKR 308
Query: 132 PDAE----KSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV-SWNIMMGGYGQNGQIE 186
+ S +S +V+ ++ + EEA ++ MPE+ +W ++G G+IE
Sbjct: 309 MQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIE 368
Query: 187 KALDLFRR--MPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDV---SSWTTI 241
A R M EPE N ++ + K + GR E+A+ +M+E V SSW
Sbjct: 369 LAEIAARELLMVEPE-NPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSWCLF 427
Query: 242 VD 243
D
Sbjct: 428 KD 429
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 103/201 (51%), Gaps = 17/201 (8%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPE----RDMRLWDTMINGYIKCGMIKEARKLFDQMA 102
CN+ + L K GR A+++F + + D ++ M+ Y K G I EA KL +M
Sbjct: 471 CNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMM 530
Query: 103 ER----DTRLWTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKINQIE 155
E D + +++N + + EA K+F + +V T++T++ G K +I+
Sbjct: 531 ENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQ 590
Query: 156 EAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTII 209
EA LF M ++ +++N + +N ++ AL + +M + +V ++NTII
Sbjct: 591 EAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII 650
Query: 210 KALVRCGRIEDAQWHFNQMQE 230
LV+ G++++A F+QM++
Sbjct: 651 FGLVKNGQVKEAMCFFHQMKK 671
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 120/245 (48%), Gaps = 20/245 (8%)
Query: 21 HPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMR 76
H + G L + + ++ N I L + + A+ VF Q+ D+
Sbjct: 762 HNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVA 821
Query: 77 LWDTMINGYIKCGMIKEARKLFDQMA----ERDTRLWTTMLNGYIECGMIKEARKLF--- 129
++ +++ Y K G I E +L+ +M+ E +T +++G ++ G + +A L+
Sbjct: 822 TYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDL 881
Query: 130 -DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPE---RKDVS-WNIMMGGYGQNGQ 184
D + T+ +++G K ++ EA++LF M + R + + +NI++ G+G+ G+
Sbjct: 882 MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGE 941
Query: 185 IEKALDLFRRM-PEPER-NVVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTT 240
+ A LF+RM E R ++ +++ ++ L GR+++ +F +++E DV +
Sbjct: 942 ADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNL 1001
Query: 241 IVDCL 245
I++ L
Sbjct: 1002 IINGL 1006
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 103/200 (51%), Gaps = 18/200 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLF-DQMA 102
N + K G+ D +++ +M E + + +I+G +K G + +A L+ D M+
Sbjct: 824 NFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMS 883
Query: 103 ERDTR----LWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIE 155
+RD + +++G + G + EA++LF+G + + ++ ++NG+ K + +
Sbjct: 884 DRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEAD 943
Query: 156 EAERLFYEMPE---RKDV-SWNIMMGGYGQNGQIEKALDLFRRMPEPERN--VVSWNTII 209
A LF M + R D+ ++++++ G++++ L F+ + E N VV +N II
Sbjct: 944 AACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLII 1003
Query: 210 KALVRCGRIEDAQWHFNQMQ 229
L + R+E+A FN+M+
Sbjct: 1004 NGLGKSHRLEEALVLFNEMK 1023
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 26/201 (12%)
Query: 50 FISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAER- 104
I L K GR A+++F+ M + R +++ +ING+ K G A LF +M +
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 105 ---DTRLWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTMVNGYVKINQI 154
D + ++ +++ G + E F PD V ++ ++NG K +++
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD----VVCYNLIINGLGKSHRL 1012
Query: 155 EEAERLFYEMPERKDV-----SWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNT 207
EEA LF EM + + ++N ++ G G +E+A ++ + E NV ++N
Sbjct: 1013 EEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNA 1072
Query: 208 IIKALVRCGRIEDAQWHFNQM 228
+I+ G+ E A + M
Sbjct: 1073 LIRGYSLSGKPEHAYAVYQTM 1093
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 98/187 (52%), Gaps = 21/187 (11%)
Query: 77 LWDTMINGYIKCGMIKEARKLFDQM------AERDTRLWTTMLNGYIECGMIKEARKLFD 130
++ ++ K G + EA +LF M ERD+ + +ML G EA ++
Sbjct: 374 IYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDS--YMSMLESLCGAGKTIEAIEMLS 431
Query: 131 GPDAEKSVST----WSTMVNGYVKINQIEEAERLFYEM----PERKDVSWNIMMGGYGQN 182
EK V T ++T+ + K+ QI LF +M P ++NI++ +G+
Sbjct: 432 KIH-EKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRV 490
Query: 183 GQIEKALDLFRRM--PEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSW 238
G++++A+++F + + + +++S+N++I L + G +++A F +MQE+ DV ++
Sbjct: 491 GEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTY 550
Query: 239 TTIVDCL 245
+T+++C
Sbjct: 551 STLMECF 557
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 23/169 (13%)
Query: 48 NSFISRLCKEGRTDHARKVFDQM----PERDMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ S L K + H +F++M P D+ ++ +I + + G + EA +F+++
Sbjct: 446 NTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELER 505
Query: 104 RDTRLWTTMLNGYIEC----GMIKEARKLFD-------GPDAEKSVSTWSTMVNGYVKIN 152
D + N I C G + EA F PD V T+ST++ + K
Sbjct: 506 SDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPD----VVTYSTLMECFGKTE 561
Query: 153 QIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPE 197
++E A LF EM + V++NI++ +NG+ +A+DL+ +M +
Sbjct: 562 RVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQ 610
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 44/239 (18%)
Query: 36 STFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDT-MINGYIKCGMIKEA 94
S F+L++ +K C S ++ ++G+ HA V + RD+ + T MI+ Y G+I EA
Sbjct: 184 SEFTLSSVVKTCASL--KILQQGKQVHAMVV---VTGRDLVVLGTAMISFYSSVGLINEA 238
Query: 95 RKLFDQM-AERDTRLWTTMLNGYIECGMIKEARKLFDG--PDAEKSVSTW---------- 141
K+++ + D + ++++G I KEA L P+ S+
Sbjct: 239 MKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQRPNVRVLSSSLAGCSDNSDLW 298
Query: 142 -----------------STMVNG----YVKINQIEEAERLFYEMPERKDVSWNIMMGGYG 180
S + NG Y K QI +A +F +P + VSW M+ Y
Sbjct: 299 IGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYA 358
Query: 181 QNGQIEKALDLFRRMPEPERNV----VSWNTIIKALVRCGRIEDAQWHFNQMQERERDV 235
NG KAL++FR M E V V++ +I A G +++ + F M+E+ R V
Sbjct: 359 VNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLV 417
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 91/191 (47%), Gaps = 12/191 (6%)
Query: 41 NTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQ 100
N +K N + + HA +FD++P+RD+ ++ ++ +++ G + LF Q
Sbjct: 15 NVTVKSTNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQ 74
Query: 101 M----AERDTRLWTTMLNG-----YIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKI 151
+ + + +T +L Y E G ++ L AE + + +++ Y K
Sbjct: 75 IHRASPDLSSHTFTPVLGACSLLSYPETG--RQVHALMIKQGAETGTISKTALIDMYSKY 132
Query: 152 NQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKA 211
+ ++ R+F + E+ VSWN ++ G+ +NG+ ++AL +F M ER +S T+
Sbjct: 133 GHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYR-ERVEISEFTLSSV 191
Query: 212 LVRCGRIEDAQ 222
+ C ++ Q
Sbjct: 192 VKTCASLKILQ 202
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 99/195 (50%), Gaps = 14/195 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
NSFI+ K + A+K F+ + R++ W+ MI+G+ + G EA K+F A
Sbjct: 411 NSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMP 470
Query: 105 DTRLWTTMLNG--YIECGMIKEARK-----LFDGPDAEKSVSTWSTMVNGYVKINQIEEA 157
+ + ++LN + E +K+ ++ L G ++ VS S +++ Y K I+E+
Sbjct: 471 NEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVS--SALLDMYAKRGNIDES 528
Query: 158 ERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIKALVRC 215
E++F EM ++ W ++ Y +G E ++LF +M + ++V++ +++ A R
Sbjct: 529 EKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRK 588
Query: 216 GRIEDAQWHFNQMQE 230
G ++ FN M E
Sbjct: 589 GMVDKGYEIFNMMIE 603
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 114/272 (41%), Gaps = 81/272 (29%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERD----MRLWDTMINGYIKCGMIKEARKLFDQMAER 104
S I+ C E AR++ +R + + + +++ Y KCG+++ + +F QM+ER
Sbjct: 281 SVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSER 340
Query: 105 DTRLWTTMLNG-----------------------------YIECG-MIKEARKLFD---- 130
+ WTTM++ ++C IKE K+
Sbjct: 341 NVVSWTTMISSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIK 400
Query: 131 -GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKAL 189
G +E SV ++ + Y K +E+A++ F ++ R+ +SWN M+ G+ QNG +AL
Sbjct: 401 TGFVSEPSVG--NSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEAL 458
Query: 190 DLF-RRMPEPERNVVSWNTIIKALV-----------RC---------------------- 215
+F E N ++ +++ A+ RC
Sbjct: 459 KMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDM 518
Query: 216 ----GRIEDAQWHFNQMQERERDVSSWTTIVD 243
G I++++ FN+M ++ + V WT+I+
Sbjct: 519 YAKRGNIDESEKVFNEMSQKNQFV--WTSIIS 548
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 12/184 (6%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIK-EARKLF 98
L +++ NSFI+ + G AR+VFD+M +DM W+++++G + G EA +F
Sbjct: 205 LESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIF 264
Query: 99 DQM----AERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKI 151
M E D +T+++ +K AR++ E + + +++ Y K
Sbjct: 265 RDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKC 324
Query: 152 NQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKA 211
+E + +F++M ER VSW M+ N ++ L R N V++ +I A
Sbjct: 325 GVLEAVKSVFHQMSERNVVSWTTMI---SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINA 381
Query: 212 LVRC 215
V+C
Sbjct: 382 -VKC 384
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
++ + K G D + KVF++M +++ +W ++I+ Y G + LF +M + +
Sbjct: 513 SALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVA 572
Query: 108 L-WTTMLNGYIEC---GMIKEARKLFD----GPDAEKSVSTWSTMVNGYVKINQIEEAER 159
T L+ C GM+ + ++F+ + E S +S MV+ + +++EAE
Sbjct: 573 PDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEE 632
Query: 160 LFYEMP 165
L E+P
Sbjct: 633 LMSEVP 638
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 116/286 (40%), Gaps = 52/286 (18%)
Query: 6 PPLS-FILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHAR 64
P LS FI + A N L G L A + +++ N+FIS K T AR
Sbjct: 254 PDLSTFINLAASCQNPETLTQGR--LIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSAR 311
Query: 65 KVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER-------------------- 104
+FD M R W MI+GY + G + EA LF M +
Sbjct: 312 LLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFG 371
Query: 105 --------DTR------------LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTM 144
D R + +++ Y +CG I EAR +FD EK+V TW+TM
Sbjct: 372 SLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNT-PEKTVVTWTTM 430
Query: 145 VNGYVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP-- 198
+ GY EA +LF +M + +++ ++ +G +EK + F M +
Sbjct: 431 IAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYN 490
Query: 199 -ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVD 243
+ ++ ++ L R G++E+A M + D W +++
Sbjct: 491 ISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKP-DAGIWGALLN 535
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD--- 130
++ + + +I+ Y KCG I EAR +FD E+ WTTM+ GY G+ EA KLF
Sbjct: 392 NVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMI 451
Query: 131 GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS-----WNIMMGGYGQNGQI 185
D + + T+ ++ +E+ F+ M + ++S ++ M+ G+ G++
Sbjct: 452 DLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKL 511
Query: 186 EKALDLFRRM-PEPERNVVSWNTIIKA 211
E+AL+L R M +P+ + W ++ A
Sbjct: 512 EEALELIRNMSAKPDAGI--WGALLNA 536
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 29/198 (14%)
Query: 12 LMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMP 71
++HAH + + PF T +++ +K CNS D+A KVF++MP
Sbjct: 73 MVHAHLIKS-------PFWSDVFVGTATVDMFVK-CNS----------VDYAAKVFERMP 114
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG 131
ERD W+ M++G+ + G +A LF +M + + + I+ +++ KL +
Sbjct: 115 ERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEA 174
Query: 132 PDA-------EKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKD---VSWNIMMGGYGQ 181
A + V+ +T ++ Y K ++ A +L +E +R D VSWN M Y
Sbjct: 175 MHAVGIRLGVDVQVTVANTWISTYGKCGDLDSA-KLVFEAIDRGDRTVVSWNSMFKAYSV 233
Query: 182 NGQIEKALDLFRRMPEPE 199
G+ A L+ M E
Sbjct: 234 FGEAFDAFGLYCLMLREE 251
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMP--ERDMRLWDTMINGYIKCGMIKEAR 95
++ ++ N++IS K G D A+ VF+ + +R + W++M Y G +A
Sbjct: 182 LGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAF 241
Query: 96 KLFDQMAERDTRL-WTTMLNGYIEC--------GMIKEARKLFDGPDAEKSVSTWSTMVN 146
L+ M + + +T +N C G + + + G D + + +T ++
Sbjct: 242 GLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTD--QDIEAINTFIS 299
Query: 147 GYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVS 204
Y K A LF M R VSW +M+ GY + G +++AL LF M + + ++V+
Sbjct: 300 MYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVT 359
Query: 205 WNTIIKALVRCGRIEDAQW 223
++I + G +E +W
Sbjct: 360 LLSLISGCGKFGSLETGKW 378
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 58/141 (41%), Gaps = 37/141 (26%)
Query: 138 VSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM-- 195
V + V+ +VK N ++ A ++F MPER +WN M+ G+ Q+G +KA LFR M
Sbjct: 87 VFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRL 146
Query: 196 ----PEP-------------------------------ERNVVSWNTIIKALVRCGRIED 220
P+ + V NT I +CG ++
Sbjct: 147 NEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDS 206
Query: 221 AQWHFNQMQERERDVSSWTTI 241
A+ F + +R V SW ++
Sbjct: 207 AKLVFEAIDRGDRTVVSWNSM 227
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
CN+ + GR+ A VF QMP +D+ W++++ ++ G +A L M
Sbjct: 282 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 341
Query: 107 RL----WTTMLNG-----YIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEA 157
+ +T+ L + E G I + G + + + +V+ Y KI ++ E+
Sbjct: 342 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG--NALVSMYGKIGEMSES 399
Query: 158 ERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRC 215
R+ +MP R V+WN ++GGY ++ +KAL F+ M E ++ T++ L C
Sbjct: 400 RRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTM-RVEGVSSNYITVVSVLSAC 456
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 12/185 (6%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
L +++ NS IS L G D+A +FDQM ERD W+++ Y + G I+E+ ++F
Sbjct: 174 LESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFS 233
Query: 100 QM----AERDTRLWTTMLNGYIECGMIKEARKLFD-----GPDAEKSVSTWSTMVNGYVK 150
M E ++ +T+L+ K R + G D+ V +T++ Y
Sbjct: 234 LMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS--VVCVCNTLLRMYAG 291
Query: 151 INQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIK 210
+ EA +F +MP + +SWN +M + +G+ AL L M ++ V++ T
Sbjct: 292 AGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS-VNYVTFTS 350
Query: 211 ALVRC 215
AL C
Sbjct: 351 ALAAC 355
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 85/175 (48%), Gaps = 12/175 (6%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYI 117
G +RKVF++MP+R++ W +++ GY G +E ++ M ++ I
Sbjct: 91 GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVI 150
Query: 118 E-CGMIKE---ARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV 170
CG++K+ R++ E ++ +++++ + ++ A +F +M ER +
Sbjct: 151 SSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTI 210
Query: 171 SWNIMMGGYGQNGQIEKALDLFRRMP--EPERNVVSWNTIIKALVRCGRIEDAQW 223
SWN + Y QNG IE++ +F M E N + +T++ L G ++ +W
Sbjct: 211 SWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVL---GHVDHQKW 262
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM-AERDT 106
N+ +S K G +R+V QMP RD+ W+ +I GY + +A F M E +
Sbjct: 384 NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVS 443
Query: 107 RLWTTMLNGYIEC---------GMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEA 157
+ T+++ C G A + G ++++ V ++++ Y K + +
Sbjct: 444 SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVK--NSLITMYAKCGDLSSS 501
Query: 158 ERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
+ LF + R ++WN M+ +G E+ L L +M
Sbjct: 502 QDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 539
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 108/219 (49%), Gaps = 25/219 (11%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDM----RLWDTMINGYIKCG 89
+A L+ + S IS L GRT A +F+++ + + R ++ ++ GY+K G
Sbjct: 294 MAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTG 353
Query: 90 MIKEARKLFDQMAER----DTRLWTTMLNGYIECGMIKEAR---KLFDGPDAEKSVSTWS 142
+K+A + +M +R D ++ +++ Y+ G + AR K + D + + +S
Sbjct: 354 PLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFS 413
Query: 143 TMVNGYVKINQIEEAERLFYEM------PERKDVSWNIMMGGYGQNGQIEKALDLFRRM- 195
++ G+ + ++ ++ EM P+R+ +N+++ +G+ ++ A+ F RM
Sbjct: 414 RLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQ--FYNVVIDTFGKFNCLDHAMTTFDRML 471
Query: 196 ---PEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER 231
EP+R V+WNT+I + GR A+ F M+ R
Sbjct: 472 SEGIEPDR--VTWNTLIDCHCKHGRHIVAEEMFEAMERR 508
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 13/194 (6%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR- 107
+ +S K + A+KVFD M ERD+ LW MI G+ + G + A + F +M R
Sbjct: 442 TLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRS 501
Query: 108 ---LWTTMLNGYIECGMIKEAR-----KLFDGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
++++ + M+++ + G D SV +V+ Y K + E AE
Sbjct: 502 DGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVC--GALVDMYGKNGKYETAET 559
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIKALVRCGR 217
+F WN M+G Y Q+G +EKAL F ++ E + V++ +++ A G
Sbjct: 560 IFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGS 619
Query: 218 IEDAQWHFNQMQER 231
++ +NQM+E+
Sbjct: 620 TLQGKFLWNQMKEQ 633
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 94/232 (40%), Gaps = 51/232 (21%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM----AERDTRLWTTML 113
G + AR++FD + RD W+TMI G +K I++ F M + ++ +L
Sbjct: 248 GDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVL 307
Query: 114 N-----GYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK 168
N G G + AR + D+ + + +++ Y + EA +F +
Sbjct: 308 NGCSKLGSYSLGKLIHARIIVS--DSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPN 365
Query: 169 DVSWNIMMGGYGQNGQIEKALDLFRRM-----PEP------------------------- 198
VSWN ++ G +NG E+A+ ++RR+ P P
Sbjct: 366 LVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLH 425
Query: 199 --------ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
ER+V T++ + E AQ F+ M +ERDV WT ++
Sbjct: 426 GQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVM--KERDVVLWTEMI 475
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 13/158 (8%)
Query: 80 TMINGYIKCGMIKEARKLFDQMAERDTRLWTTML-----NGYIECGMIKEARKLFDGPDA 134
+++ Y CG ++ AR++FD + RD W TM+ N IE G++ L G D
Sbjct: 239 SVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDP 298
Query: 135 EKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS----WNIMMGGYGQNGQIEKALD 190
+ T+S ++NG K+ + + + ++ N ++ Y G + +A
Sbjct: 299 TQ--FTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFY 356
Query: 191 LFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
+F R+ P N+VSWN+II G E A + ++
Sbjct: 357 VFGRIHNP--NLVSWNSIISGCSENGFGEQAMLMYRRL 392
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 108/221 (48%), Gaps = 23/221 (10%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAE 103
N I LC D AR++FD+MPE+ + + ++ GY K G+ + +L + M
Sbjct: 151 NLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMES 210
Query: 104 ----RDTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNGYVKINQIEE 156
+ ++ T+++ + G ++ K+ + E + T+++ ++ K ++ +
Sbjct: 211 FGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLD 270
Query: 157 AERLFYEM--------PERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWN 206
A R+F +M P +++N+M+ G+ + G +E A LF + E + ++ S+N
Sbjct: 271 ASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYN 330
Query: 207 TIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
++ LVR G+ +A+ QM ++ + S+ ++D L
Sbjct: 331 IWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGL 371
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 104/225 (46%), Gaps = 31/225 (13%)
Query: 48 NSFISRLCKEGRTDHARKVFDQM--------PERDMRLWDTMINGYIKCGMIKEARKLFD 99
NS IS LCKEG+ A ++F M P + ++ M+ G+ K G++++A+ LF+
Sbjct: 256 NSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFE 315
Query: 100 QMAERD----TRLWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTMVNGY 148
+ E D + + L G + G EA + GP S+ +++ +++G
Sbjct: 316 SIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGP----SIYSYNILMDGL 371
Query: 149 VKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNV 202
K+ + +A+ + M V++ ++ GY G+++ A L + M N
Sbjct: 372 CKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNA 431
Query: 203 VSWNTIIKALVRCGRIEDAQWHFNQMQERER--DVSSWTTIVDCL 245
+ N ++ +L + GRI +A+ +M E+ D + IVD L
Sbjct: 432 YTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGL 476
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 15/195 (7%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
CN + LC G D A ++ M + N YI G++ ++ L + D
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYI--GLVDDS--LIENNCLPDL 524
Query: 107 RLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYE 163
++T+LNG + G EA+ LF G + ++ ++ + K +I A R+ +
Sbjct: 525 ITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKD 584
Query: 164 MPERKDV-----SWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCG 216
M E+K ++N ++ G G QI + L M E N+ ++NT I+ L
Sbjct: 585 M-EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGE 643
Query: 217 RIEDAQWHFNQMQER 231
++EDA ++M ++
Sbjct: 644 KVEDATNLLDEMMQK 658
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 116/247 (46%), Gaps = 33/247 (13%)
Query: 23 LIHGYPFLRTRLASTFSLNTEMKR---------CNSFISRLCKEGRTDHARKVFDQMPER 73
L+HGY + ++ + SL EM R CN + L K GR A ++ +M E+
Sbjct: 402 LLHGYCSV-GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEK 460
Query: 74 ----DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF 129
D + +++G G + +A ++ M + + N YI G++ ++ L
Sbjct: 461 GYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYI--GLVDDS--LI 516
Query: 130 DG---PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK----DVSWNIMMGGYGQN 182
+ PD + T+ST++NG K + EA+ LF EM K V++NI + + +
Sbjct: 517 ENNCLPD----LITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQ 572
Query: 183 GQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSW 238
G+I A + + M + +++ ++N++I L +I + ++M+E+ ++ ++
Sbjct: 573 GKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTY 632
Query: 239 TTIVDCL 245
T + L
Sbjct: 633 NTAIQYL 639
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 14/156 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
N I LCK G+ D A +F + ++ N I+ + A KL+ +M R
Sbjct: 18 NIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSLGRAEKLYAEMIRRGLV 77
Query: 105 -DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYE 163
DT + +M++G + + +ARK+ KS ST++T++NGY K ++++ LF E
Sbjct: 78 PDTITYNSMIHGLCKQNKLAQARKV------SKSCSTFNTLINGYCKATRVKDGMNLFCE 131
Query: 164 MPERKDV----SWNIMMGGYGQNGQIEKALDLFRRM 195
M R V ++ ++ G+ Q G ALD+F+ M
Sbjct: 132 MYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 74/172 (43%), Gaps = 8/172 (4%)
Query: 55 CKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM----AERDTRLWT 110
CK G + A V Q+P RD+ W MI+G G EA +M E + ++
Sbjct: 431 CKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYS 490
Query: 111 TMLNGYIECGMIKEARKLFDGPDAEKSVS---TWSTMVNGYVKINQIEEAERLFYEMPER 167
+ L + R + ++S S +++ Y K + EA R+F MPE+
Sbjct: 491 SALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEK 550
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIE 219
VSW M+ GY +NG +AL L RM E E V L CG IE
Sbjct: 551 NLVSWKAMIMGYARNGFCREALKLMYRM-EAEGFEVDDYIFATILSTCGDIE 601
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 43/218 (19%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE 93
L + F++ + +K C+ + + GR H+ V +M + D+ + ++++ Y KCG I +
Sbjct: 281 LPNEFTVCSILKACSE--EKALRFGRQVHSL-VVKRMIKTDVFVGTSLMDMYAKCGEISD 337
Query: 94 ARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD----------------------- 130
RK+FD M+ R+T WT+++ + G +EA LF
Sbjct: 338 CRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGS 397
Query: 131 ---------------GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIM 175
EK+V ST+V Y K + +A + ++P R VSW M
Sbjct: 398 VGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAM 457
Query: 176 MGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKA 211
+ G G +ALD + M + E N ++++ +KA
Sbjct: 458 ISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKA 495
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 99/240 (41%), Gaps = 48/240 (20%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
N+ IS + G +ARKVFD MPE++ W MI+GY+K G+ EA LF+ +
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 105 --DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTW---STMVNGYVKINQIEEAER 159
+ R++ +LN + R++ G + V S++V Y + ++ A R
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQV-HGNMVKVGVGNLIVESSLVYFYAQCGELTSALR 239
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE-----------------PERNV 202
F M E+ +SW ++ + G KA+ +F M E
Sbjct: 240 AFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKA 299
Query: 203 VSWNTIIKALV--------------------RCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+ + + +LV +CG I D + F+ M R+ +WT+I+
Sbjct: 300 LRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMS--NRNTVTWTSII 357
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 100/232 (43%), Gaps = 50/232 (21%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMI--------------------------NGYIKCGMI 91
G A + FD M E+D+ W +I N + C ++
Sbjct: 232 GELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSIL 291
Query: 92 KEARK-------------LFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSV 138
K + + +M + D + T++++ Y +CG I + RK+FDG +V
Sbjct: 292 KACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTV 351
Query: 139 STWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNI----MMGGYGQNGQIEKALDLFRR 194
TW++++ + + EEA LF M R ++ N+ ++ G G + +L +
Sbjct: 352 -TWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQ 410
Query: 195 MPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER-ERDVSSWTTIVD 243
+ + E+NV +T++ +CG DA FN +Q+ RDV SWT ++
Sbjct: 411 IIKNSIEKNVYIGSTLVWLYCKCGESRDA---FNVLQQLPSRDVVSWTAMIS 459
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 16/223 (7%)
Query: 9 SFILMHAHKLNTHPLIHGYPFLRTR--LASTFSLNTEMKRCNSFISRLCKEGRTDHARKV 66
S I HA + I + ++ R +A+ ++ + ++ C S + L G+ HA+ +
Sbjct: 355 SIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLL--GKELHAQII 412
Query: 67 FDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEAR 126
+ + E+++ + T++ Y KCG ++A + Q+ RD WT M++G G EA
Sbjct: 413 KNSI-EKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEAL 471
Query: 127 KLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGG----- 178
E + T+S+ + + R + + ++ N+ +G
Sbjct: 472 DFLKEMIQEGVEPNPFTYSSALKACANSESLLIG-RSIHSIAKKNHALSNVFVGSALIHM 530
Query: 179 YGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDA 221
Y + G + +A +F MPE +N+VSW +I R G +A
Sbjct: 531 YAKCGFVSEAFRVFDSMPE--KNLVSWKAMIMGYARNGFCREA 571
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 104/208 (50%), Gaps = 17/208 (8%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAER 104
S IS C++G A +FD++ E+ + + +I+G K G + A L ++M +
Sbjct: 334 SLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSK 393
Query: 105 DTRL----WTTMLNGYIECGMIKEARKLFDGPDA---EKSVSTWSTMVNGYVKINQIEEA 157
+ + T+++GY GM+ EA ++D + + V T +T+ + + ++ + +EA
Sbjct: 394 GVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEA 453
Query: 158 ERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKA 211
++ + M E VS+ ++ Y + G +E+A LF M + N +++N +I A
Sbjct: 454 KQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYA 513
Query: 212 LVRCGRIEDAQWHFNQMQERERDVSSWT 239
+ G+I++A+ M+ D S+T
Sbjct: 514 YCKQGKIKEARKLRANMEANGMDPDSYT 541
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 111/248 (44%), Gaps = 56/248 (22%)
Query: 51 ISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIK------------------- 87
+ LC+ G + ++K+ + + ++ ++T+IN Y+K
Sbjct: 231 VEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGV 290
Query: 88 ----------------CGMIKEARKLFDQMAER----DTRLWTTMLNGYIECGMIKEARK 127
G + +A KLFD+M ER D ++T++++ G +K A
Sbjct: 291 VYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFL 350
Query: 128 LFDGPDAEKSVS----TWSTMVNGYVKINQIEEAERLFYEMPER----KDVSWNIMMGGY 179
LFD EK +S T+ +++G K+ ++ AE L EM + V +N ++ GY
Sbjct: 351 LFD-ELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGY 409
Query: 180 GQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDA-QWHFNQMQERER-DV 235
+ G +++A ++ M + + +V + NTI R R ++A QW F M+ +
Sbjct: 410 CRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLST 469
Query: 236 SSWTTIVD 243
S+T ++D
Sbjct: 470 VSYTNLID 477
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 105/211 (49%), Gaps = 17/211 (8%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRL----WDTMINGYIKCGMIKEARKLFDQMAER 104
+ I +CK G A + ++M + + + ++T+I+GY + GM+ EA ++D M ++
Sbjct: 369 ALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQK 428
Query: 105 ----DTRLWTTMLNGYIECGMIKEARK-LFDGPDAEKSVST--WSTMVNGYVKINQIEEA 157
D T+ + + EA++ LF + +ST ++ +++ Y K +EEA
Sbjct: 429 GFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEA 488
Query: 158 ERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKA 211
+RLF EM + +++N+M+ Y + G+I++A L M + + ++ ++I
Sbjct: 489 KRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHG 548
Query: 212 LVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+++A F++M + D +S T V
Sbjct: 549 ECIADNVDEAMRLFSEMGLKGLDQNSVTYTV 579
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 88/198 (44%), Gaps = 50/198 (25%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRL------------------------------ 77
N+ I C++G D A ++D M ++ +
Sbjct: 403 NTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMME 462
Query: 78 ---------WDTMINGYIKCGMIKEARKLFDQMAERDTR----LWTTMLNGYIECGMIKE 124
+ +I+ Y K G ++EA++LF +M+ + + + M+ Y + G IKE
Sbjct: 463 GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKE 522
Query: 125 ARKLFDGPDA---EKSVSTWSTMVNGYVKINQIEEAERLFYEMP----ERKDVSWNIMMG 177
ARKL +A + T++++++G + ++EA RLF EM ++ V++ +M+
Sbjct: 523 ARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMIS 582
Query: 178 GYGQNGQIEKALDLFRRM 195
G + G+ ++A L+ M
Sbjct: 583 GLSKAGKSDEAFGLYDEM 600
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 109/249 (43%), Gaps = 51/249 (20%)
Query: 42 TEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGY-IKC------------ 88
T+M C + + K G + A KVFD+MP+RDM W+ MI+G+ + C
Sbjct: 136 TDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDM 195
Query: 89 -----------------------GMIKEARKLFDQMA----ERDTRLWTTMLNGYIECGM 121
G ++E + + D + T +L+ Y +
Sbjct: 196 RRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKC 255
Query: 122 IKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSW------NIM 175
I AR++FD D +K+ TWS M+ GYV+ I+EA +F++M +V+ ++
Sbjct: 256 IIYARRVFD-LDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLI 314
Query: 176 MGGYGQNGQIE--KALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERER 233
+ G + G + + + + ++ NTII + G + DA F+++ +
Sbjct: 315 LMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIG--LK 372
Query: 234 DVSSWTTIV 242
DV S+ +++
Sbjct: 373 DVISYNSLI 381
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ IS K G A + F ++ +D+ ++++I G + +E+ +LF +M R
Sbjct: 347 NTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIR 406
Query: 108 L-WTTMLNGYIECGMIKEARKLFDGPDAEK---------SVSTWSTMVNGYVKINQIEEA 157
TT+L C + L G + S + +++ Y K +++ A
Sbjct: 407 PDITTLLGVLTACSHLA---ALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVA 463
Query: 158 ERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNV--VSWNTIIKALVRC 215
+R+F M +R VSWN M+ G+G +G ++AL LF M E N V+ I+ A
Sbjct: 464 KRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHS 523
Query: 216 GRIEDAQWHFNQMQERERDV 235
G +++ + FN M + +V
Sbjct: 524 GLVDEGKQLFNSMSRGDFNV 543
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 12 LMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMP 71
L H + + ++HGY ++NT + CN+ + K G+ D A++VFD M
Sbjct: 425 LGHGSSCHGYCVVHGY-----------AVNTSI--CNALMDMYTKCGKLDVAKRVFDTMH 471
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIECGMIKEARK 127
+RD+ W+TM+ G+ G+ KEA LF+ M E D +L+ G++ E ++
Sbjct: 472 KRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQ 531
Query: 128 LFDGP-----DAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV 170
LF+ + + ++ M + + ++EA +MP D+
Sbjct: 532 LFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDI 579
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 93/212 (43%), Gaps = 18/212 (8%)
Query: 23 LIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMR--LWDT 80
+IH + R+ S+ ++ + R + C E + AR VFD++P + WD
Sbjct: 20 VIHQHLLKRSLTLSSSTVLVNLTR----LYASCNE--VELARHVFDEIPHPRINPIAWDL 73
Query: 81 MINGYIKCGMIKEARKLFDQMAERDTR----LWTTMLNGYIECGMIKEARKL---FDGPD 133
MI Y ++A L+ +M R + +L I + + + + D
Sbjct: 74 MIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSD 133
Query: 134 AEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLF- 192
+ + +V+ Y K ++E A ++F EMP+R V+WN M+ G+ + + + LF
Sbjct: 134 FATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFL 193
Query: 193 --RRMPEPERNVVSWNTIIKALVRCGRIEDAQ 222
RR+ N+ + + AL R G + + +
Sbjct: 194 DMRRIDGLSPNLSTIVGMFPALGRAGALREGK 225
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 109/281 (38%), Gaps = 63/281 (22%)
Query: 12 LMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMP 71
L A L +HGY TR+ + L + + + C +AR+VFD
Sbjct: 215 LGRAGALREGKAVHGYC---TRMGFSNDLVVKTGILDVYAKSKC----IIYARRVFDLDF 267
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG 131
+++ W MI GY++ MIKEA ++F QM D T + G+I F
Sbjct: 268 KKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTP----VAIGLILMGCARFGD 323
Query: 132 PDAEKSVSTWS-------------TMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGG 178
+ V ++ T+++ Y K + +A R F E+ + +S+N ++ G
Sbjct: 324 LSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITG 383
Query: 179 YGQNGQIEKALDLFRRM------PEPER-------------------------------N 201
N + E++ LF M P+ N
Sbjct: 384 CVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVN 443
Query: 202 VVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
N ++ +CG+++ A+ F+ M +RD+ SW T++
Sbjct: 444 TSICNALMDMYTKCGKLDVAKRVFDTMH--KRDIVSWNTML 482
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 106/215 (49%), Gaps = 18/215 (8%)
Query: 44 MKRCNSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFD 99
++ CN+++S L +GR D A + + +M + + +++GY + G + + +L
Sbjct: 203 VESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQ 262
Query: 100 QMAERDTRL----WTTMLNGYIECGMIKEARKL---FDGPDAEKSVSTWSTMVNGYVKIN 152
M R + T++ G+ E G++ A KL + +V T++T+++G+ +
Sbjct: 263 DMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAM 322
Query: 153 QIEEAERLFYEMPE----RKDVSWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWN 206
+++EA ++F EM V++N ++ GY Q G E A + M +R+++++N
Sbjct: 323 KLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYN 382
Query: 207 TIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTI 241
+I L + + A ++ ++E V + +T
Sbjct: 383 ALIFGLCKQAKTRKAAQFVKEL-DKENLVPNSSTF 416
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 39/239 (16%)
Query: 15 AHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMP--- 71
+H L TH ++ T + N + K S + + G D KVFD +
Sbjct: 112 SHSLETHAIV----------LHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSY 161
Query: 72 ---ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGY-----------I 117
+ R++D++ + + A F QM + N Y I
Sbjct: 162 RECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDI 221
Query: 118 ECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER-----KDVSW 172
+E R+ P+ T + +++GY + ++++ L +M ER DVS+
Sbjct: 222 ALRFYREMRRCKISPNP----YTLNMVMSGYCRSGKLDKGIELLQDM-ERLGFRATDVSY 276
Query: 173 NIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
N ++ G+ + G + AL L M + + NVV++NT+I R ++++A F +M+
Sbjct: 277 NTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMK 335
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 106/215 (49%), Gaps = 18/215 (8%)
Query: 44 MKRCNSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFD 99
++ CN+++S L +GR D A + + +M + + +++GY + G + + +L
Sbjct: 203 VESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQ 262
Query: 100 QMAERDTRL----WTTMLNGYIECGMIKEARKL---FDGPDAEKSVSTWSTMVNGYVKIN 152
M R + T++ G+ E G++ A KL + +V T++T+++G+ +
Sbjct: 263 DMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAM 322
Query: 153 QIEEAERLFYEMPE----RKDVSWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWN 206
+++EA ++F EM V++N ++ GY Q G E A + M +R+++++N
Sbjct: 323 KLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYN 382
Query: 207 TIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTI 241
+I L + + A ++ ++E V + +T
Sbjct: 383 ALIFGLCKQAKTRKAAQFVKEL-DKENLVPNSSTF 416
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 39/239 (16%)
Query: 15 AHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMP--- 71
+H L TH ++ T + N + K S + + G D KVFD +
Sbjct: 112 SHSLETHAIV----------LHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSY 161
Query: 72 ---ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGY-----------I 117
+ R++D++ + + A F QM + N Y I
Sbjct: 162 RECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDI 221
Query: 118 ECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER-----KDVSW 172
+E R+ P+ T + +++GY + ++++ L +M ER DVS+
Sbjct: 222 ALRFYREMRRCKISPNP----YTLNMVMSGYCRSGKLDKGIELLQDM-ERLGFRATDVSY 276
Query: 173 NIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
N ++ G+ + G + AL L M + + NVV++NT+I R ++++A F +M+
Sbjct: 277 NTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMK 335
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 116/287 (40%), Gaps = 88/287 (30%)
Query: 41 NTEMK-RCNSFISRLCKEGRT---DHARKVFDQMPERDMRLWDTMINGYI-----KCGMI 91
N+ K R ++IS +C + RK+ D + + + +DT++N +I KCG +
Sbjct: 60 NSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCK-YDTILNNHILSMYGKCGSL 118
Query: 92 KEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG-------PD----------- 133
++AR++FD M ER+ +T+++ GY + G EA +L+ PD
Sbjct: 119 RDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKAC 178
Query: 134 --------------------AEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWN 173
+ + + ++ YV+ NQ+ +A R+FY +P + +SW+
Sbjct: 179 ASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWS 238
Query: 174 IMMGGYGQNGQIEKALDLFRRM-------------------------------------- 195
++ G+ Q G +AL + M
Sbjct: 239 SIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIK 298
Query: 196 PEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
E N ++ ++ RCG + A+ F+Q++ D +SW I+
Sbjct: 299 SELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE--RPDTASWNVII 343
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 66/150 (44%), Gaps = 9/150 (6%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM----AE 103
N I K G AR++FD M RD+ W T+I GY + G +EA LF +M E
Sbjct: 512 NGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIE 571
Query: 104 RDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVST----WSTMVNGYVKINQIEEAER 159
+ + +L G+++E KL+ E +S S +V+ + ++ EAER
Sbjct: 572 PNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAER 631
Query: 160 LFYEMPERKD-VSWNIMMGGYGQNGQIEKA 188
EM D V W ++ G + A
Sbjct: 632 FIDEMKLEPDVVVWKTLLSACKTQGNVHLA 661
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 80/163 (49%), Gaps = 17/163 (10%)
Query: 71 PERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF- 129
PE+ ++ + +I+ Y KCG + +AR++FD M RD W+T++ GY + G +EA LF
Sbjct: 506 PEQFIK--NGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFK 563
Query: 130 --DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM-------PERKDVSWNI-MMGGY 179
E + T+ ++ + +EE +L+ M P ++ S + ++
Sbjct: 564 EMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARA 623
Query: 180 GQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQ 222
G+ + E+ +D + P+ VV W T++ A G + AQ
Sbjct: 624 GRLNEAERFIDEMKLEPD----VVVWKTLLSACKTQGNVHLAQ 662
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 113/272 (41%), Gaps = 80/272 (29%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
N+ + + G AR+VFD+MP RD+ W+++I+GY G +EA +++ ++
Sbjct: 145 NALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIV 204
Query: 105 -DTRLWTTMLNGYIECGMIKE-----------------------------------ARKL 128
D+ +++L + ++K+ AR++
Sbjct: 205 PDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRV 264
Query: 129 FDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER------------------KDV 170
FD D SVS ++TM+ GY+K+ +EE+ R+F E ++ +D+
Sbjct: 265 FDEMDVRDSVS-YNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDL 323
Query: 171 SW--------------------NIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIK 210
S NI++ Y + G + A D+F M ++ VSWN+II
Sbjct: 324 SLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC--KDTVSWNSIIS 381
Query: 211 ALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
++ G + +A F M E T ++
Sbjct: 382 GYIQSGDLMEAMKLFKMMMIMEEQADHITYLM 413
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 35/197 (17%)
Query: 28 PFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQM----------------- 70
PF+ L+S+ +LN E++R ++ + L + + K+ D+
Sbjct: 8 PFISRALSSSSNLN-ELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS 66
Query: 71 PERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD 130
P +++ LW+++I + K G+ EA + + ++ E + Y +IK LFD
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSP-----DKYTFPSVIKACAGLFD 121
Query: 131 GPDA------------EKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGG 178
E + + +V+ Y ++ + A ++F EMP R VSWN ++ G
Sbjct: 122 AEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISG 181
Query: 179 YGQNGQIEKALDLFRRM 195
Y +G E+AL+++ +
Sbjct: 182 YSSHGYYEEALEIYHEL 198
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 86/215 (40%), Gaps = 43/215 (20%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECG-------MIKEAR 126
D+ + + +I+ Y KCG + ++ K+F M DT W T+++ + G + + R
Sbjct: 442 DLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMR 501
Query: 127 KLFDGPDA-------------------------------EKSVSTWSTMVNGYVKINQIE 155
K PD E + + ++ Y K +E
Sbjct: 502 KSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLE 561
Query: 156 EAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIKALV 213
+ R+F M R V+W M+ YG G+ EKAL+ F M + + V + II A
Sbjct: 562 NSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACS 621
Query: 214 RCGRIEDAQWHFNQMQERERD---VSSWTTIVDCL 245
G +++ F +M+ + + + +VD L
Sbjct: 622 HSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLL 656
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 111/275 (40%), Gaps = 57/275 (20%)
Query: 14 HAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER 73
H L+ I+ Y L + F L + ++ N I K G AR VF+ M +
Sbjct: 319 HLRDLSLAKYIYNY-----MLKAGFVLESTVR--NILIDVYAKCGDMITARDVFNSMECK 371
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQM----AERDTRLWTTMLNGYIECGMIKEARKLF 129
D W+++I+GYI+ G + EA KLF M + D + +++ +K + L
Sbjct: 372 DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLH 431
Query: 130 D-----GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQ 184
G + SVS + +++ Y K ++ ++ ++F M V+WN ++ + G
Sbjct: 432 SNGIKSGICIDLSVS--NALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGD 489
Query: 185 IEKALDLFRRM------PEPERNVVSW-------------------------------NT 207
L + +M P+ +V+ N
Sbjct: 490 FATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNA 549
Query: 208 IIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+I+ +CG +E++ F +M RDV +WT ++
Sbjct: 550 LIEMYSKCGCLENSSRVFERMS--RRDVVTWTGMI 582
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 76/172 (44%), Gaps = 15/172 (8%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
F +E++ N+ I K G +++ +VF++M RD+ W MI Y GM E K
Sbjct: 538 FGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAY---GMYGEGEKA 594
Query: 98 FDQMAER-------DTRLWTTMLNGYIECGMIKEARKLFDGPDA----EKSVSTWSTMVN 146
+ A+ D+ ++ ++ G++ E F+ + + ++ +V+
Sbjct: 595 LETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVD 654
Query: 147 GYVKINQIEEAERLFYEMPERKDVS-WNIMMGGYGQNGQIEKALDLFRRMPE 197
+ +I +AE MP + D S W ++ +G +E A + RR+ E
Sbjct: 655 LLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIE 706
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 82/182 (45%), Gaps = 14/182 (7%)
Query: 27 YPFLRTRLASTFSLNTEMKRCNS-----FISRLCKEGRTDHARKVFDQMPERDMRLWDTM 81
YP +RT + E RCNS + ARKVFD++PER++ + + M
Sbjct: 52 YPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVM 111
Query: 82 INGYIKCGMIKEARKLFDQMAERDTR----LWTTMLNGYIECGMIKEARKLFDGPDAEKS 137
I Y+ G E K+F M + R + +L G I RK+ G +
Sbjct: 112 IRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIH-GSATKVG 170
Query: 138 VSTWSTMVNG----YVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFR 193
+S+ + NG Y K + EA + EM R VSWN ++ GY QN + + AL++ R
Sbjct: 171 LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCR 230
Query: 194 RM 195
M
Sbjct: 231 EM 232
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 85/178 (47%), Gaps = 9/178 (5%)
Query: 62 HARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA----ERDTRLWTTMLNGYI 117
+ + +F +M ++ + W+ MI Y+K M EA +L+ +M E D T++L
Sbjct: 261 YVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACG 320
Query: 118 ECGMIKEARKLFDGPDAEKSVSTW---STMVNGYVKINQIEEAERLFYEMPERKDVSWNI 174
+ + +K+ + +K + + +++ Y K +E+A +F M R VSW
Sbjct: 321 DTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTA 380
Query: 175 MMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
M+ YG +G+ A+ LF ++ + + +++ T + A G +E+ + F M +
Sbjct: 381 MISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTD 438
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 62/95 (65%), Gaps = 6/95 (6%)
Query: 133 DAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPE---RKDV-SWNIMMGGYGQNGQIEKA 188
D + +V ++T+VNGYVK +++A R + M + + DV ++NI++ GY ++ + + A
Sbjct: 188 DGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLA 247
Query: 189 LDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDA 221
LDLFR M E E NVVS+NT+I+ + G+IE+
Sbjct: 248 LDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEG 282
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 92/188 (48%), Gaps = 24/188 (12%)
Query: 49 SFISRLCKEGRTDHARKVFDQMP-----ERDMRLWDTMINGYIKCGMIKEARKLFDQM-- 101
S I C+ + D+A FD M + ++ +++T++NGY+K G + +A + + +M
Sbjct: 162 SAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGK 221
Query: 102 --AERDTRLWTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKINQIEE 156
A+ D + ++NGY A LF E +V +++T++ G++ +IEE
Sbjct: 222 ERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEE 281
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKA----LDLFRRMPEPERNVVSWNTI 208
++ YEM E + + I++ G + G+++ A LDL + P + ++
Sbjct: 282 GVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSE--FDYGSL 339
Query: 209 IKALVRCG 216
++ L CG
Sbjct: 340 VEKL--CG 345
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 83/159 (52%), Gaps = 14/159 (8%)
Query: 77 LWDTMINGYIKCGMIKEARKLFDQM-----AERDTRLWTTMLNGYIECGMIKEARKLFDG 131
++ + I+ Y + + A FD M + + ++ T++NGY++ G + +A + +
Sbjct: 159 IFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQR 218
Query: 132 PDAEKS---VSTWSTMVNGYVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQ 184
E++ V T++ ++NGY + ++ + A LF EM E+ VS+N ++ G+ +G+
Sbjct: 219 MGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGK 278
Query: 185 IEKALDLFRRMPE--PERNVVSWNTIIKALVRCGRIEDA 221
IE+ + + M E + + ++ L R GR++DA
Sbjct: 279 IEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDA 317
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 99/204 (48%), Gaps = 28/204 (13%)
Query: 50 FISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAER- 104
I LC + + + AR++ QM E+ + ++ +INGY K GMI++A + + M R
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 105 ---DTRLWTTMLNGYIECGMIKE--------ARKLFDGPDAEKSVSTWSTMVNGYVKINQ 153
+TR + ++ GY + + K RK+ PD V T++++++G +
Sbjct: 424 LSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVL--PD----VVTYNSLIDGQCRSGN 477
Query: 154 IEEAERLFYEMPERKDV----SWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNT 207
+ A RL M +R V ++ M+ ++ ++E+A DLF + + NVV +
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 208 IIKALVRCGRIEDAQWHFNQMQER 231
+I + G++++A +M +
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSK 561
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 103/210 (49%), Gaps = 40/210 (19%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ ++ L + G D ++V+ +M E ++ ++ M+NGY K G ++EA + ++
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI-- 244
Query: 104 RDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYE 163
+E G+ PD T+++++ GY + ++ A ++F E
Sbjct: 245 -------------VEAGL---------DPD----FFTYTSLIMGYCQRKDLDSAFKVFNE 278
Query: 164 MP----ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIKALVRCGR 217
MP R +V++ ++ G +I++A+DLF +M + E V ++ +IK+L R
Sbjct: 279 MPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSER 338
Query: 218 IEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
+A +M+E + ++ ++T ++D L
Sbjct: 339 KSEALNLVKEMEETGIKPNIHTYTVLIDSL 368
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 32/252 (12%)
Query: 23 LIHGYPFLRTRLASTFSLNTEM--KRC-------NSFISRLCKEGRTDHARKVFDQMPER 73
LI GY R L S F + EM K C I LC R D A +F +M +
Sbjct: 259 LIMGY-CQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDD 317
Query: 74 D----MRLWDTMINGYIKCGMIKEARKLFDQMAERDTR----LWTTMLNGYIECGMIKEA 125
+ +R + +I EA L +M E + +T +++ ++A
Sbjct: 318 ECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKA 377
Query: 126 RKLFDGPDAEK----SVSTWSTMVNGYVKINQIEEAERLFYEMPERK----DVSWNIMMG 177
R+L G EK +V T++ ++NGY K IE+A + M RK ++N ++
Sbjct: 378 RELL-GQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIK 436
Query: 178 GYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDV 235
GY ++ + KA+ + +M E + +VV++N++I R G + A + M +R
Sbjct: 437 GYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVP 495
Query: 236 SSW--TTIVDCL 245
W T+++D L
Sbjct: 496 DQWTYTSMIDSL 507
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 75/148 (50%), Gaps = 11/148 (7%)
Query: 109 WTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNGYVKINQIEEAERLFYEMP 165
+ T+LN G++ E ++++ +K ++ T++ MVNGY K+ +EEA + ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 166 ER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIE 219
E ++ ++ GY Q ++ A +F MP RN V++ +I L RI+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 220 DAQWHFNQMQERE--RDVSSWTTIVDCL 245
+A F +M++ E V ++T ++ L
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSL 333
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 98/223 (43%), Gaps = 64/223 (28%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
S I LCK R + A +FD + ++ ++ ++ +I+GY K G + EA + ++M +
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK 561
Query: 105 ----DTRLWTTMLNGYIECGMIKEA------------------------RKLFDG----- 131
++ + +++G G +KEA R L DG
Sbjct: 562 NCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHA 621
Query: 132 -------------PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER---KDV-SWNI 174
PDA T++T + Y + ++ +AE + +M E D+ +++
Sbjct: 622 YSRFQQMLSSGTKPDAH----TYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSS 677
Query: 175 MMGGYGQNGQIEKALDLFRRM----PEPERNVVSWNTIIKALV 213
++ GYG GQ A D+ +RM EP ++ ++ ++IK L+
Sbjct: 678 LIKGYGDLGQTNFAFDVLKRMRDTGCEPSQH--TFLSLIKHLL 718
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 17/202 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQM-- 101
N ++ CK G + A + ++ E D + ++I GY + + A K+F++M
Sbjct: 222 NKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPL 281
Query: 102 --AERDTRLWTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKINQIEE 156
R+ +T +++G I EA LF + +V T++ ++ + E
Sbjct: 282 KGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSE 341
Query: 157 AERLFYEMPE---RKDV-SWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIK 210
A L EM E + ++ ++ +++ + EKA +L +M E NV+++N +I
Sbjct: 342 ALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALIN 401
Query: 211 ALVRCGRIEDAQWHFNQMQERE 232
+ G IEDA M+ R+
Sbjct: 402 GYCKRGMIEDAVDVVELMESRK 423
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 108/240 (45%), Gaps = 27/240 (11%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
IHG F L+ + + T M + C E TD A KVFD++P+RD W+ + +
Sbjct: 135 IHGKIFSDGFLSDSLLMTTLMD-----LYSTC-ENSTD-ACKVFDEIPKRDTVSWNVLFS 187
Query: 84 GYIKCGMIKEARKLFDQM-------AERDTRLWTTMLNGYIECGMI---KEARKLFDGPD 133
Y++ ++ LFD+M + D L G + K+ D
Sbjct: 188 CYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENG 247
Query: 134 AEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFR 193
+++ +T+V+ Y + +++A ++FY M ER VSW ++ G NG ++A++ F
Sbjct: 248 LSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFN 307
Query: 194 RMPE----PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE----RDVSSWTTIVDCL 245
M + PE ++ ++ A G + + F++M+ E ++ + +VD L
Sbjct: 308 EMLKFGISPEEQTLTG--LLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLL 365
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 96/202 (47%), Gaps = 14/202 (6%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
F+L +K C R G H D D+ + ++I YIKCG + EA ++
Sbjct: 61 FTLPVALKACGEL--REVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRM 118
Query: 98 FDQMAERDTRLWTTMLNGYIECGMIKEA----RKLFDGPDAEKSVSTWSTMVNGYVKINQ 153
FD++ + D W++M++G+ + G +A R++ D T T+V+ K++
Sbjct: 119 FDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSN 178
Query: 154 IEEAERLFYEMPERKDVS-----WNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTI 208
R + R+ S N ++ Y ++ ++A++LF+ + E ++V+SW+T+
Sbjct: 179 -SRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAE--KDVISWSTV 235
Query: 209 IKALVRCGRIEDAQWHFNQMQE 230
I V+ G +A FN M +
Sbjct: 236 IACYVQNGAAAEALLVFNDMMD 257
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 18/228 (7%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE 93
LA L TE+K + + K + A VF ++P +D+ W +I+G+ GM
Sbjct: 289 LAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHR 348
Query: 94 ARKLFDQMA-ERDTR----LWTTMLNGYIECGMIKEARKLFD-----GPDAEKSVSTWST 143
+ + F M E +TR L +L E G +++A+ G D+ + ++
Sbjct: 349 SIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIG--AS 406
Query: 144 MVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM---PEPER 200
+V Y + + A ++F + + V W ++ GYG +G+ KAL+ F M E +
Sbjct: 407 LVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKP 466
Query: 201 NVVSWNTIIKALVRCGRIEDAQWHFNQMQERER---DVSSWTTIVDCL 245
N V++ +I+ A G I + F M R ++ + +VD L
Sbjct: 467 NEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLL 514
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 19/216 (8%)
Query: 17 KLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMR 76
++N +IHG+ + +L +++ +S I K GR A ++FD++ + D+
Sbjct: 75 EVNYGEMIHGF------VKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIV 128
Query: 77 LWDTMINGYIKCGMIKEARKLFDQ--MAERDTRLWTTMLNGYIECGMIKEAR--KLFDGP 132
W +M++G+ K G +A + F + MA T T++ C + +R + G
Sbjct: 129 TWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGF 188
Query: 133 DAEKS----VSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKA 188
+ +S ++++N Y K +EA LF + E+ +SW+ ++ Y QNG +A
Sbjct: 189 VIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEA 248
Query: 189 LDLFRRMPE--PERNVVSWNTIIKALVRCGRIEDAQ 222
L +F M + E NV T++ L C D +
Sbjct: 249 LLVFNDMMDDGTEPNVA---TVLCVLQACAAAHDLE 281
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 21/211 (9%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
+HG+ R + ++ NS ++ K A +F + E+D+ W T+I
Sbjct: 185 VHGFVIRR-------GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIA 237
Query: 84 GYIKCGMIKEARKLFDQMAERDTRL-WTTMLNGYIECGM---IKEARKLFD-----GPDA 134
Y++ G EA +F+ M + T T+L C +++ RK + G +
Sbjct: 238 CYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLET 297
Query: 135 EKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRR 194
E VST +V+ Y+K EEA +F +P + VSW ++ G+ NG ++++ F
Sbjct: 298 EVKVST--ALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSI 355
Query: 195 MPEPERNVVSWNTIIKALVRC---GRIEDAQ 222
M ++K L C G +E A+
Sbjct: 356 MLLENNTRPDAILMVKVLGSCSELGFLEQAK 386
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 82/169 (48%), Gaps = 10/169 (5%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIE-CGM 121
AR++F +M +R + W+T++ + +E F M + + L ++ CG
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 122 IKEAR--KLFDGPDAEKSVSTWSTMVNG------YVKINQIEEAERLFYEMPERKDVSWN 173
++E ++ G +K V+ S + G Y+K ++ EA R+F E+ + V+W+
Sbjct: 73 LREVNYGEMIHGF-VKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 174 IMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQ 222
M+ G+ +NG +A++ FRRM T+I + C ++ +++
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSR 180
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 96/197 (48%), Gaps = 19/197 (9%)
Query: 66 VFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIECGM 121
V D P ++ + T+ING+ K G + A LF M +R D ++T+++GY + GM
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 122 IKEARKLFDGP---DAEKSVSTWSTMVNGYVKINQIEEA----ERLFYEMPERKDVSWNI 174
+ KLF + V +S+ ++ YVK + A +R+ + V++ I
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 175 MMGGYGQNGQIEKALDLF----RRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
++ G Q+G+I +A ++ +R EP ++V+++++I +CG + + M +
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEP--SIVTYSSLIDGFCKCGNLRSGFALYEDMIK 454
Query: 231 RER--DVSSWTTIVDCL 245
DV + +VD L
Sbjct: 455 MGYPPDVVIYGVLVDGL 471
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 105/224 (46%), Gaps = 27/224 (12%)
Query: 42 TEMKRCNSFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKL 97
T + R + CK + ++FD M D+ + + +I+ KC I++A K
Sbjct: 535 TTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKF 594
Query: 98 FDQMAER----DTRLWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTMVN 146
F+ + E D + TM+ GY + EA ++F+ GP+ T + +++
Sbjct: 595 FNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNT----VTLTILIH 650
Query: 147 GYVKINQIEEAERLFYEMPERKD----VSWNIMMGGYGQNGQIEKALDLFRRMPEP--ER 200
K N ++ A R+F M E+ V++ +M + ++ IE + LF M E
Sbjct: 651 VLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISP 710
Query: 201 NVVSWNTIIKALVRCGRIEDAQWHFNQMQERER--DVSSWTTIV 242
++VS++ II L + GR+++A F+Q + + DV ++ ++
Sbjct: 711 SIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 754
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 112/248 (45%), Gaps = 27/248 (10%)
Query: 23 LIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMP----ERDMRLW 78
++H F L + LN + NS I C+ R D A KVF M + D+ +
Sbjct: 477 MLHAMRFSVKMLGQSIRLNVVV--FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATF 534
Query: 79 DTMINGYIK----CGMIKE--ARKLFDQM----AERDTRLWTTMLNGYIECGMIKEARKL 128
T++ I C +K +LFD M D + +++ +C I++A K
Sbjct: 535 TTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKF 594
Query: 129 FDG---PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQ 181
F+ E + T++TM+ GY + +++EAER+F + V+ I++ +
Sbjct: 595 FNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK 654
Query: 182 NGQIEKALDLFRRMPE--PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSS 237
N ++ A+ +F M E + N V++ ++ + IE + F +MQE+ + S
Sbjct: 655 NNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVS 714
Query: 238 WTTIVDCL 245
++ I+D L
Sbjct: 715 YSIIIDGL 722
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 96/197 (48%), Gaps = 19/197 (9%)
Query: 66 VFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIECGM 121
V D P ++ + T+ING+ K G + A LF M +R D ++T+++GY + GM
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 122 IKEARKLFDGP---DAEKSVSTWSTMVNGYVKINQIEEA----ERLFYEMPERKDVSWNI 174
+ KLF + V +S+ ++ YVK + A +R+ + V++ I
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 175 MMGGYGQNGQIEKALDLF----RRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
++ G Q+G+I +A ++ +R EP ++V+++++I +CG + + M +
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEP--SIVTYSSLIDGFCKCGNLRSGFALYEDMIK 454
Query: 231 RER--DVSSWTTIVDCL 245
DV + +VD L
Sbjct: 455 MGYPPDVVIYGVLVDGL 471
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 49 SFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
+ I CK + ++FD M D+ + + +I+ KC I++A K F+ + E
Sbjct: 571 TLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG 630
Query: 105 ----DTRLWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTMVNGYVKINQ 153
D + TM+ GY + EA ++F+ GP+ T + +++ K N
Sbjct: 631 KMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNT----VTLTILIHVLCKNND 686
Query: 154 IEEAERLFYEMPERKD----VSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNT 207
++ A R+F M E+ V++ +M + ++ IE + LF M E ++VS++
Sbjct: 687 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 746
Query: 208 IIKALVRCGRIEDAQWHFNQMQERER--DVSSWTTIV 242
II L + GR+++A F+Q + + DV ++ ++
Sbjct: 747 IIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 783
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 33 RLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQM----PERDMRLWDTMINGYIKC 88
RL + + ++ + + EGR + A +F +M E D + T+I+ + K
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKH 579
Query: 89 GMIKEARKLFDQM----AERDTRLWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTW 141
+LFD M D + +++ +C I++A K F+ E + T+
Sbjct: 580 MKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTY 639
Query: 142 STMVNGYVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPE 197
+TM+ GY + +++EAER+F + V+ I++ +N ++ A+ +F M E
Sbjct: 640 NTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE 699
Query: 198 --PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
+ N V++ ++ + IE + F +MQE+ + S++ I+D L
Sbjct: 700 KGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGL 751
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 98/201 (48%), Gaps = 22/201 (10%)
Query: 48 NSFISRLCK-EGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMA 102
N I LC+ +G D K+F +MP+R D + T+I+G + G I EA+KLF +M
Sbjct: 160 NVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMV 219
Query: 103 ERDTR----LWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIE 155
E+D +T+++NG + EA + + E +V T+S++++G K +
Sbjct: 220 EKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSL 279
Query: 156 EAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMP----EPERNVVSWNT 207
+A LF M R V++ ++ G + +I++A++L RM +P+ + +
Sbjct: 280 QAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGL--YGK 337
Query: 208 IIKALVRCGRIEDAQWHFNQM 228
+I + +A ++M
Sbjct: 338 VISGFCAISKFREAANFLDEM 358
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 107/236 (45%), Gaps = 18/236 (7%)
Query: 11 ILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQM 70
ILM L T+ + G+ L+ S + N + N+ + LCK G+ AR + +M
Sbjct: 187 ILMKGLSL-TNRIGDGFKLLQIMKTSGVAPNAVVY--NTLLHALCKNGKVGRARSLMSEM 243
Query: 71 PERDMRLWDTMINGYIKCGMIKEA----RKLFDQMAERDTRLWTTMLNGYIECGMIKEAR 126
E + ++ +I+ Y + ++ K F D T ++ G + EA
Sbjct: 244 KEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEAL 303
Query: 127 KLFDGPDAEKS---VSTWSTMVNGYVKINQIEEAERLFYEMPERKDV-----SWNIMMGG 178
++ + +++ V +T+V GY + ++ A+R F EM ERK ++N+++ G
Sbjct: 304 EVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEM-ERKGYLPNVETYNLLIAG 362
Query: 179 YGQNGQIEKALDLFRRMPEPER--NVVSWNTIIKALVRCGRIEDAQWHFNQMQERE 232
Y G ++ ALD F M N ++NT+I+ L GR +D MQ+ +
Sbjct: 363 YCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSD 418
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 126/255 (49%), Gaps = 30/255 (11%)
Query: 14 HAHKL-NTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMP- 71
H H+L N++ I FL ++ ++ NS +S +CK G+ A + MP
Sbjct: 27 HIHQLINSNCGILSLKFLAYLVSRGYT--PHRSSFNSVVSFVCKLGQVKFAEDIVHSMPR 84
Query: 72 ---ERDMRLWDTMINGYIKCGMIKEARKLFDQM-------AERDTRLWTTMLNGYIECGM 121
E D+ ++++I+G+ + G I+ A + + + + D + ++ NG+ + M
Sbjct: 85 FGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKM 144
Query: 122 IKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKD------VSW 172
+ E ++ G +V T+ST ++ + K +++ A + F+ M ++D V++
Sbjct: 145 LDEVF-VYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSM--KRDALSPNVVTF 201
Query: 173 NIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
++ GY + G +E A+ L++ M NVV++ +I + G ++ A+ +++M E
Sbjct: 202 TCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVE 261
Query: 231 RERDVSS--WTTIVD 243
+ +S +TTI+D
Sbjct: 262 DRVEPNSLVYTTIID 276
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 16/192 (8%)
Query: 51 ISRLCKEGRTDHARKVFDQMPERD----MRLWDTMINGYIKCGMIKEARKLFDQMAER-- 104
IS LC G+ A ++ + M + D M ++ TM+N Y K G +K A ++ ++ ER
Sbjct: 310 ISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGF 369
Query: 105 --DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFY 162
D +TM++G + G + EA F A + ++ +++ K E ERLF
Sbjct: 370 EPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVM--YTVLIDALCKEGDFIEVERLFS 427
Query: 163 EMPERKDVSWNIM----MGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIKALVRCG 216
++ E V M + G + G + A L RM + +++++ T+I L G
Sbjct: 428 KISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKG 487
Query: 217 RIEDAQWHFNQM 228
+ +A+ F++M
Sbjct: 488 LMVEARQVFDEM 499
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 102/212 (48%), Gaps = 22/212 (10%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRL----WDTMINGYIKCGMIKEARKLFDQMAER 104
+ I + G +D+A K +M + MRL + +I+G G +KEA ++ + M +
Sbjct: 273 TIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKS 332
Query: 105 ----DTRLWTTMLNGYIECGMIKEARKLFDGP---DAEKSVSTWSTMVNGYVKINQIEEA 157
D ++TTM+N Y + G +K A ++ E V STM++G K Q+ EA
Sbjct: 333 DLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA 392
Query: 158 ERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE----PERNV-VSWNTIIKAL 212
+++ + + DV + +++ + G + LF ++ E P++ + SW I L
Sbjct: 393 -IVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSW---IAGL 448
Query: 213 VRCGRIEDAQWHFNQMQERE--RDVSSWTTIV 242
+ G + DA +M + D+ ++TT++
Sbjct: 449 CKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLI 480
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 103/197 (52%), Gaps = 17/197 (8%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
+ + RLCK+G +A+ +F +M E+ ++ ++ MI+ + G +A +L M E+
Sbjct: 15 AIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEK 74
Query: 105 ----DTRLWTTMLNGYIECGMIKEARKLFDGP---DAEKSVSTWSTMVNGYVKINQIEEA 157
D ++ ++N +++ + EA +++ + T+++M++G+ K +++++A
Sbjct: 75 QINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDA 134
Query: 158 ERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIKA 211
+R+ M + V+++ ++ GY + +++ +++F M N V++ T+I
Sbjct: 135 KRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 194
Query: 212 LVRCGRIEDAQWHFNQM 228
+ G ++ AQ N+M
Sbjct: 195 FCQVGDLDAAQDLLNEM 211
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 78/163 (47%), Gaps = 15/163 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N I C GR A ++ M E+ D+ + +IN ++K + EA +++ +M
Sbjct: 49 NCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLR 108
Query: 104 ----RDTRLWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIEE 156
T + +M++G+ + + +A+++ D V T+ST++NGY K +++
Sbjct: 109 WSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDN 168
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRM 195
+F EM R V++ ++ G+ Q G ++ A DL M
Sbjct: 169 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM 211
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 16/189 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N +I LC GR D AR++ M D+ ++T+++GYIK G EA LFD + D
Sbjct: 347 NIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIH 406
Query: 108 ----LWTTMLNGYIECGMIKEARKLFDGPDAE---KSVSTWSTMVNGYVKINQIEEAERL 160
+ T+++G E G ++ A++L + + V T++T+V G+VK + A +
Sbjct: 407 PSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEV 466
Query: 161 FYEMPERKDV-----SWNIMMGGYGQNGQIEKALDLFRRMPEPER---NVVSWNTIIKAL 212
+ EM RK + ++ G + G +KA L M + ++ +N I L
Sbjct: 467 YDEML-RKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGL 525
Query: 213 VRCGRIEDA 221
+ G + A
Sbjct: 526 CKVGNLVKA 534
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 99/210 (47%), Gaps = 15/210 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRL----WDTMINGYIKCGMIKEARKLFDQMAE 103
N+ + K G + K++ +M R++ ++ +ING+ K G ++EAR+ M
Sbjct: 242 NTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRR 301
Query: 104 RDTRL----WTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
+ + ++ GY + G+ +A + D + ST++ + +I++
Sbjct: 302 SGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDD 361
Query: 157 AERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFR--RMPEPERNVVSWNTIIKALVR 214
A L M VS+N +M GY + G+ +A LF R + ++V++NT+I L
Sbjct: 362 ARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCE 421
Query: 215 CGRIEDAQWHFNQM--QERERDVSSWTTIV 242
G +E AQ +M Q DV ++TT+V
Sbjct: 422 SGNLEGAQRLKEEMTTQLIFPDVITYTTLV 451
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 58 GRTDHARKVFDQMPERD-----MRLWDTMINGYIKCGMIKEA----RKLFDQMAERDTRL 108
G +D A ++ ++M D + +++ I+G K G + +A RK+F D
Sbjct: 493 GDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVT 552
Query: 109 WTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNGYVKINQIEEAERLFYEMP 165
+TT++ GY+E G K AR L+D ++ SV T+ ++ G+ K ++E+A + EM
Sbjct: 553 YTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMK 612
Query: 166 ER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIE 219
+R ++ N ++ G + G I++A +M E N S+ +I + E
Sbjct: 613 KRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWE 672
Query: 220 DAQWHFNQMQERERDVSSWT 239
+ + +M ++E + +T
Sbjct: 673 EVVKLYKEMLDKEIEPDGYT 692
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 102/217 (47%), Gaps = 26/217 (11%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERD-- 105
NS + C+ G A+ F +M ++D+ W+T+I+ + EA +F + +
Sbjct: 252 NSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDS-SEALLMFQRFESQGFV 310
Query: 106 ------TRLWTTMLN-GYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAE 158
T L N + CG R G + K+V + +++ Y K I +++
Sbjct: 311 PNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFN--KNVELANALIDMYAKCGNIPDSQ 368
Query: 159 RLFYEMPERKD-VSWNIMMGGYGQNGQIEKALDLFRRMPE----PERNVVSWNTIIKALV 213
R+F E+ +R++ VSW MM GYG +G +A++LF +M P+R + + ++ A
Sbjct: 369 RVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDR--IVFMAVLSACR 426
Query: 214 RCGRIEDAQWHFNQMQER-----ERDVSSWTTIVDCL 245
G +E +FN M+ +RD+ + +VD L
Sbjct: 427 HAGLVEKGLKYFNVMESEYGINPDRDI--YNCVVDLL 461
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 99/245 (40%), Gaps = 57/245 (23%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL 108
+ I ++G + AR +FD+MP+RD+ W MI GY A + F +M ++ T
Sbjct: 50 NLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTS- 108
Query: 109 WTTMLNGYIECGMIKEARK--------LFDGP----DAEKSVSTWSTMVNGYVKIN-QIE 155
N + ++K R L G E S+ + M+N Y + +E
Sbjct: 109 ----PNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTME 164
Query: 156 EAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSW---------- 205
A +F ++ + DV+W ++ G+ G L ++++M V +
Sbjct: 165 AACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASA 224
Query: 206 ---------------------------NTIIKALVRCGRIEDAQWHFNQMQERERDVSSW 238
N+I+ RCG + +A+ +F++M+ ++D+ +W
Sbjct: 225 SIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME--DKDLITW 282
Query: 239 TTIVD 243
T++
Sbjct: 283 NTLIS 287
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
+ + L K HA ++ QM R D+ ++ +++G K G ++EA K F + E
Sbjct: 299 TLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLED 358
Query: 105 D----TRLWTTMLNGYIECGMIKEARKLFDGPDAEKSV----STWSTMVNGYVKINQIEE 156
+ +T +++G + G + A + EKSV T+S+M+NGYVK +EE
Sbjct: 359 NQVPNVVTYTALVDGLCKAGDLSSAEFIIT-QMLEKSVIPNVVTYSSMINGYVKKGMLEE 417
Query: 157 AERLFYEMPERKDV----SWNIMMGGYGQNGQIEKALDLFR--RMPEPERNVVSWNTIIK 210
A L +M ++ V ++ ++ G + G+ E A++L + R+ E N + ++
Sbjct: 418 AVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVN 477
Query: 211 ALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
L R GRI++ + M + D ++T+++D
Sbjct: 478 HLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVF 514
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEA----RKLFDQ 100
+ + LCK G A + QM E+ ++ + +MINGY+K GM++EA RK+ DQ
Sbjct: 369 ALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQ 428
Query: 101 MAERDTRLWTTMLNGYIECG---MIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEA 157
+ + T+++G + G M E K E++ +VN +I +I+E
Sbjct: 429 NVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEV 488
Query: 158 ERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIKA 211
+ L +M + +++ ++ + + G E AL M E +VVS+N +I
Sbjct: 489 KGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISG 548
Query: 212 LVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVD 243
+++ G++ A W + M+E+ E D++++ +++
Sbjct: 549 MLKFGKV-GADWAYKGMREKGIEPDIATFNIMMN 581
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 97/220 (44%), Gaps = 13/220 (5%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE 93
L +++ CN+ +S G A +F M +RD ++T+ING +CG ++
Sbjct: 313 LVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEK 372
Query: 94 ARKLFDQM----AERDTRLWTTMLNGYIECGMIKEARKLFD-----GPDAEKSVSTWSTM 144
A +LF +M E D+ +++ G + ++L G + + +
Sbjct: 373 AMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE--GAL 430
Query: 145 VNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNV 202
+N Y K IE A F E V WN+M+ YG + + +FR+M E N
Sbjct: 431 LNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 490
Query: 203 VSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
++ +I+K +R G +E + +Q+ + ++++ V
Sbjct: 491 YTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSV 530
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 41/213 (19%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
KEG+ HA+ D+ + ++ Y +CG I+E+ F+Q D W +++G
Sbjct: 608 KEGQQIHAQACVSGFSS-DLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSG 666
Query: 116 YIECGMIKEARKLF-----DGPD--------AEKSVSTWSTMVNG--------------- 147
+ + G +EA ++F +G D A K+ S + M G
Sbjct: 667 FQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSE 726
Query: 148 ----------YVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE 197
Y K I +AE+ F E+ + +VSWN ++ Y ++G +ALD F +M
Sbjct: 727 TEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIH 786
Query: 198 PER--NVVSWNTIIKALVRCGRIEDAQWHFNQM 228
N V+ ++ A G ++ +F M
Sbjct: 787 SNVRPNHVTLVGVLSACSHIGLVDKGIAYFESM 819
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 102/254 (40%), Gaps = 48/254 (18%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE 93
+ + F LN + C+ I K G+ D A + + +D+ W TMI GY + +
Sbjct: 517 IKTNFQLNAYV--CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDK 574
Query: 94 ARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWST-------MVN 146
A F QM +R R L + +A K A+ VS +S+ +V
Sbjct: 575 ALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVT 634
Query: 147 GYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVS 204
Y + +IEE+ F + +++WN ++ G+ Q+G E+AL +F RM + N +
Sbjct: 635 LYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFT 694
Query: 205 WNTIIKA-----------------------------------LVRCGRIEDAQWHFNQMQ 229
+ + +KA +CG I DA+ F ++
Sbjct: 695 FGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQF--LE 752
Query: 230 ERERDVSSWTTIVD 243
++ SW I++
Sbjct: 753 VSTKNEVSWNAIIN 766
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 21/174 (12%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
CN I + G D AR+VFD + +D W MI+G K EA +LF D
Sbjct: 225 CNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLF-----CDM 279
Query: 107 RLWTTMLNGYIECGMIKEARKLFDGPDAEK----------SVSTW--STMVNGYVKINQI 154
+ M Y ++ +K+ E+ S T+ + +V+ Y + +
Sbjct: 280 YVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNL 339
Query: 155 EEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP----EPERNVVS 204
AE +F M +R V++N ++ G Q G EKA++LF+RM EP+ N ++
Sbjct: 340 ISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLA 393
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 9/147 (6%)
Query: 41 NTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQ 100
++E + CN+ IS K G A K F ++ ++ W+ +IN Y K G EA FDQ
Sbjct: 724 DSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQ 783
Query: 101 MAERDTRLWTTMLNGYIEC----GMIKEARKLFDGPDAEKSVST----WSTMVNGYVKIN 152
M + R L G + G++ + F+ ++E +S + +V+ +
Sbjct: 784 MIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAG 843
Query: 153 QIEEAERLFYEMPERKD-VSWNIMMGG 178
+ A+ EMP + D + W ++
Sbjct: 844 LLSRAKEFIQEMPIKPDALVWRTLLSA 870
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 112/248 (45%), Gaps = 54/248 (21%)
Query: 50 FISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQM--AE 103
+I LC++ + + A K+F+ M + ++ + MI+GY K G +++A L+ ++ AE
Sbjct: 240 YILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAE 299
Query: 104 R--DTRLWTTMLNGYIECGMIKEARKLF-------------------------------- 129
+ ++ T+++G+ + + AR LF
Sbjct: 300 LLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAV 359
Query: 130 ------DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK----DVSWNIMMGGY 179
+ + V T++ ++NG +Q+ EA RLF +M + ++N ++ GY
Sbjct: 360 GLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGY 419
Query: 180 GQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE--RDV 235
+ +E+ALDL M E N+++++T+I I+ A + +M + DV
Sbjct: 420 CKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDV 479
Query: 236 SSWTTIVD 243
++T ++D
Sbjct: 480 VTYTALID 487
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 97/221 (43%), Gaps = 20/221 (9%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKE 93
F ++ + N I CK G A + +M D+ + +ING + E
Sbjct: 333 FGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAE 392
Query: 94 ARKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKL---FDGPDAEKSVSTWSTMVN 146
A +LF +M + + ++++GY + +++A L E ++ T+ST+++
Sbjct: 393 ANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLID 452
Query: 147 GYVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ER 200
GY + I+ A L++EM + V++ ++ + + +++AL L+ M E
Sbjct: 453 GYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHP 512
Query: 201 NVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTI 241
N ++ ++ + GR+ A + QE + S W +
Sbjct: 513 NDHTFACLVDGFWKEGRLSVA---IDFYQENNQQRSCWNHV 550
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 112/224 (50%), Gaps = 23/224 (10%)
Query: 41 NTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARK 96
+T MK I L + + +HAR + MPE+ D ++ +I Y K G+++E+ K
Sbjct: 151 DTHMK----MIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVK 206
Query: 97 LFDQM----AERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYV 149
+F +M ER + + ++ + G A++ F+ E + T++ M+ G+
Sbjct: 207 IFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFF 266
Query: 150 KINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVV 203
++E A R F +M R D ++N M+ G+ + ++++A LF M + +VV
Sbjct: 267 LSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVV 326
Query: 204 SWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
S+ T+IK + R++D F +M+ E + ++++T++ L
Sbjct: 327 SYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGL 370
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 112/238 (47%), Gaps = 27/238 (11%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
IHG L F + E+K N+FI+ K G + K+F+ + +++ W+TMI
Sbjct: 156 IHG-------LVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIV 208
Query: 84 GYIKCGMIKEARKLFDQM----AERDTRLWTTMLNGYIECGMIKEARKL-----FDGPDA 134
+++ G+ ++ F+ E D + +L + G+++ A+ + F G
Sbjct: 209 IHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSG 268
Query: 135 EKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRR 194
K ++T +++ Y K+ ++E++ +F+E+ ++W M+ Y +G A+ F
Sbjct: 269 NKCITT--ALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFEL 326
Query: 195 MPE----PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERER---DVSSWTTIVDCL 245
M P+ V++ ++ A G +E+ + +F M +R R + ++ +VD L
Sbjct: 327 MVHYGISPDH--VTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLL 382
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 21/210 (10%)
Query: 28 PFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIK 87
F+ + A+ SL +K C S LC R H KV + R + D ++ Y++
Sbjct: 25 SFVHSLDANVSSLIAAVKSCVSI--ELC---RLLHC-KVVKSVSYRHGFIGDQLVGCYLR 78
Query: 88 CGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKE-----ARKLFDGPDAEKSVSTWS 142
G A KLFD+M ERD W ++++GY G + + +R + + T+
Sbjct: 79 LGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFL 138
Query: 143 TMVNGYVKINQIEEAERL------FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP 196
+M++ V EE + F + E K V N + YG+ G + + LF +
Sbjct: 139 SMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVV--NAFINWYGKTGDLTSSCKLFEDL- 195
Query: 197 EPERNVVSWNTIIKALVRCGRIEDAQWHFN 226
+N+VSWNT+I ++ G E +FN
Sbjct: 196 -SIKNLVSWNTMIVIHLQNGLAEKGLAYFN 224
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 100/199 (50%), Gaps = 11/199 (5%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF----DQMAERDTRLWTT 111
K G AR++FD++PER++ + ++I+G++ G EA +LF +++++ +T +
Sbjct: 170 KCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAV 229
Query: 112 MLNGYIECGMIKEARKLFDGP---DAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK 168
ML G I ++L + +++ Y K IE+A F MPE+
Sbjct: 230 MLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKT 289
Query: 169 DVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNV--VSWNTIIKALVRCGRIE-DAQWHF 225
V+WN ++ GY +G E+AL L M + ++ + + +I+ + ++E Q H
Sbjct: 290 TVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHA 349
Query: 226 NQMQER-ERDVSSWTTIVD 243
+ ++ E ++ + T +VD
Sbjct: 350 SLIRNGFESEIVANTALVD 368
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 14/197 (7%)
Query: 48 NSFIS-----RLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA 102
N+F+S K G + AR F+ MPE+ W+ +I GY G +EA L M
Sbjct: 258 NTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMR 317
Query: 103 ERDTRLWTTMLNGYIECG-------MIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIE 155
+ + L+ I + K+A E + + +V+ Y K +++
Sbjct: 318 DSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVD 377
Query: 156 EAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIKALV 213
A +F ++P + +SWN +MGGY +G+ A+ LF +M N V++ ++ A
Sbjct: 378 TARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACA 437
Query: 214 RCGRIEDAQWHFNQMQE 230
G E F M E
Sbjct: 438 YSGLSEQGWEIFLSMSE 454
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
CN+ IS K G A KVFDQMPER+ ++T+I GY K G + +A +F +M
Sbjct: 52 CNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGY 111
Query: 107 RLWTTMLNGYIECGMIK-EARKLFDGPDAEKSVSTWSTMVNG-----YVKINQIEEAERL 160
+ ++G + C + A G + + V Y +++ +E AE++
Sbjct: 112 LPNQSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQV 171
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
F +MP + +WN MM G G +++ + FR +
Sbjct: 172 FEDMPFKSLETWNHMMSLLGHRGFLKECMFFFREL 206
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 104/257 (40%), Gaps = 55/257 (21%)
Query: 38 FSLNTEMKRCNSFISR--LCKEGRTD---HARKVFDQMPERDMRLWDTMINGYIKCGMIK 92
SL + ++F+ LC GR D A +VF+ MP + + W+ M++ G +K
Sbjct: 138 LSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLK 197
Query: 93 EARKLFDQMAERDTRLWTTMLNGYIE-CGMIKE---ARKLF-----DGPDAEKSVSTWST 143
E F ++ L + G ++ +K+ +++L G D E +S ++
Sbjct: 198 ECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCE--ISVVNS 255
Query: 144 MVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE------ 197
+++ Y K AER+F + VSWN ++ ++ KAL LF MPE
Sbjct: 256 LISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPN 315
Query: 198 -------------------------------PERNVVSWNTIIKALVRCGRIEDAQWHFN 226
E +V N +I +CG +ED++ F+
Sbjct: 316 QGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFD 375
Query: 227 QMQERERDVSSWTTIVD 243
+ R++++ W ++
Sbjct: 376 YI--RDKNIVCWNALLS 390
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 111/217 (51%), Gaps = 20/217 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ + LCKE + D A + + +R D + T+I G+ + +++A +++D+M +
Sbjct: 455 NTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKK 514
Query: 104 ----RDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSV----STWSTMVNGYVKINQIE 155
+ +++ G G + A + FD AE + ST+++++ GY K ++E
Sbjct: 515 VKITPTVSTFNSLIGGLCHHGKTELAMEKFDEL-AESGLLPDDSTFNSIILGYCKEGRVE 573
Query: 156 EAERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPEP-ERNVVSWNTIIK 210
+A + E + + + NI++ G + G EKAL+ F + E E + V++NT+I
Sbjct: 574 KAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMIS 633
Query: 211 ALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
A + ++++A ++M+E+ E D ++ + + L
Sbjct: 634 AFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLL 670
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 84/161 (52%), Gaps = 14/161 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
NS I LC G+T+ A + FD++ E D ++++I GY K G +++A + +++ +
Sbjct: 525 NSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIK 584
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS--TWSTMVNGYVKINQIEEA 157
D +LNG + GM ++A F+ E+ V T++TM++ + K +++EA
Sbjct: 585 HSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEA 644
Query: 158 ERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRR 194
L EM E+ ++N + ++G++ + +L ++
Sbjct: 645 YDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 113/237 (47%), Gaps = 28/237 (11%)
Query: 33 RLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKC 88
R+ S F +N + N+ + + K+GR +++ M + + ++ ++ GY K
Sbjct: 229 RMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKL 288
Query: 89 GMIKEARKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTW 141
G +KEA ++ + M + D + ++NG G ++E +L D + K V T+
Sbjct: 289 GSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTY 348
Query: 142 STMVNGYVKINQIEEAERLFYEMP----ERKDVSWNIMM-------GGYGQNGQIEKALD 190
+T+++G ++ EA +L +M + V+ NI + ++++ +D
Sbjct: 349 NTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVD 408
Query: 191 LFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWT--TIVDCL 245
+ P+ +V+++T+IKA ++ G + A +M ++ +++ T TI+D L
Sbjct: 409 MHGFSPD----IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDAL 461
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 98/196 (50%), Gaps = 26/196 (13%)
Query: 54 LCKEGRTDHARKVFDQMPER-----DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL 108
LCKE + + + ++ + D+ + T+I Y+K G + A ++ +M ++ ++
Sbjct: 390 LCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKM 449
Query: 109 WTTMLNGYIECGMIKEARKLFDGPDAEKSVS---------TWSTMVNGYVKINQIEEAER 159
T LN ++ + KE RKL + + S T+ T++ G+ + ++E+A
Sbjct: 450 NTITLNTILD-ALCKE-RKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALE 507
Query: 160 LFYEMPERKDV----SWNIMMGGYGQNGQIEKALDLFRRMPE----PERNVVSWNTIIKA 211
++ EM + K ++N ++GG +G+ E A++ F + E P+ + ++N+II
Sbjct: 508 MWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDS--TFNSIILG 565
Query: 212 LVRCGRIEDAQWHFNQ 227
+ GR+E A +N+
Sbjct: 566 YCKEGRVEKAFEFYNE 581
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRT---DHARKVFDQMPERDMRL----WDTMINGYIKCGM 90
L + CN+ + L + + AR+VFD M + + L ++ ++NGY G
Sbjct: 160 LKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGK 219
Query: 91 IKEARKLFDQMAER-----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS---TWS 142
+++A + ++M D + T+L + G + + ++L V T++
Sbjct: 220 LEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYN 279
Query: 143 TMVNGYVKINQIEEAERLFYEMPERKDV-----SWNIMMGGYGQNGQIEKALDLFRRMP- 196
+V GY K+ ++EA ++ E+ ++ +V ++NI++ G G + + L+L M
Sbjct: 280 NLVYGYCKLGSLKEAFQIV-ELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKS 338
Query: 197 -EPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
+ + +VV++NT+I G +A+ QM+
Sbjct: 339 LKLQPDVVTYNTLIDGCFELGLSLEARKLMEQME 372
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 10/184 (5%)
Query: 55 CKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM-AERDTRLWTTML 113
CK +T ARKVFD+M ER++ W++++ ++ G + + F +M +R TTM+
Sbjct: 161 CK--KTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMV 218
Query: 114 NGYIECGMIKEARKLFDGP----DAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKD 169
CG KL + E + + +V+ Y K +E A +F M ++
Sbjct: 219 VLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNV 278
Query: 170 VSWNIMMGGYGQNGQIEKALDLFRRMPEPER---NVVSWNTIIKALVRCGRIEDAQWHFN 226
+W+ M+ G Q G E+AL LF +M + N V++ ++ A G ++D +F+
Sbjct: 279 WTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFH 338
Query: 227 QMQE 230
+M++
Sbjct: 339 EMEK 342
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 84/164 (51%), Gaps = 13/164 (7%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYI 117
G+ H++ + ++ E + RL +++ Y K G ++ AR +F++M +++ W+ M+ G
Sbjct: 231 GKLVHSQVMVREL-ELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLA 289
Query: 118 ECGMIKEARKLFDGPDAEKSV----STWSTMVNGYVKINQIEEAERLFYEMPERKDVS-- 171
+ G +EA +LF E SV T+ ++ +++ + F+EM + +
Sbjct: 290 QYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPM 349
Query: 172 ---WNIMMGGYGQNGQIEKALDLFRRMP-EPERNVVSWNTIIKA 211
+ M+ G+ G++ +A D ++MP EP + V W T++ A
Sbjct: 350 MIHYGAMVDILGRAGRLNEAYDFIKKMPFEP--DAVVWRTLLSA 391
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 108/227 (47%), Gaps = 19/227 (8%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKE 93
F + + + CN + R K G+TD ++ F M R ++ MI+ K G ++
Sbjct: 221 FRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEA 280
Query: 94 ARKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPD---AEKSVSTWSTMVN 146
AR LF++M R DT + +M++G+ + G + + F+ E V T++ ++N
Sbjct: 281 ARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALIN 340
Query: 147 GYVKINQIEEAERLFYEMP----ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER-- 200
+ K ++ + EM + VS++ ++ + + G +++A+ + M
Sbjct: 341 CFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVP 400
Query: 201 NVVSWNTIIKALVRCGRIEDAQWHFNQMQE--RERDVSSWTTIVDCL 245
N ++ ++I A + G + DA N+M + E +V ++T ++D L
Sbjct: 401 NEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGL 447
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 92/182 (50%), Gaps = 15/182 (8%)
Query: 77 LWDTMINGYIKCGMIKEARKLFDQMAE----RDTRLWTTMLNGYIECGMIKEARKLFD-- 130
++D + + I GM++EA + F +M TR +L+ + + G + ++ F
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 131 -GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQI 185
G A +V T++ M++ K +E A LF EM R V++N M+ G+G+ G++
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 313
Query: 186 EKALDLFRRMPE--PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTI 241
+ + F M + E +V+++N +I + G++ + +M+ + +V S++T+
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373
Query: 242 VD 243
VD
Sbjct: 374 VD 375
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 100/199 (50%), Gaps = 18/199 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAE 103
+FI LC + + A+ V ++M E ++ ++ T+++ Y K G E L D+M E
Sbjct: 511 GTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKE 570
Query: 104 RDTRL----WTTMLNGYIECGMIKEARKLF----DGPDAEKSVSTWSTMVNGYVKINQIE 155
D + + +++G + ++ +A F + + + + ++ M++G K NQ+E
Sbjct: 571 LDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVE 630
Query: 156 EAERLFYEMPERKDV----SWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTII 209
A LF +M ++ V ++ +M G + G + +AL L +M E + +++++ +++
Sbjct: 631 AATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLV 690
Query: 210 KALVRCGRIEDAQWHFNQM 228
L C +++ A+ +M
Sbjct: 691 WGLSHCNQLQKARSFLEEM 709
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 108/232 (46%), Gaps = 21/232 (9%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
IHG L S F N+ M + C D K+FD++P+RD+ W+T+++
Sbjct: 203 IHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSC-----DDVLKLFDEIPQRDVASWNTVVS 257
Query: 84 GYIKCGMIKEARKLFDQMAE-----RDTRLWTTMLNGYIECGMIKEARKLFD-----GPD 133
+K G +A LF +M D+ +T+L+ + ++ R+L G
Sbjct: 258 SLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLM 317
Query: 134 AEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFR 193
E SV+ + ++ Y K +++ E L+ M + V++ M+ Y G ++ A+++F
Sbjct: 318 QELSVN--NALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFA 375
Query: 194 RMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVS--SWTTIVD 243
+ E+N +++N ++ R G A F M +R +++ S T+ VD
Sbjct: 376 NV--TEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVD 425
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 96/236 (40%), Gaps = 53/236 (22%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYI 117
G D A ++F + E++ ++ ++ G+ + G +A KLF M +R L L +
Sbjct: 365 GMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAV 424
Query: 118 E-CGMIKEARK--------LFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK 168
+ CG++ E + + G + T +++ + ++ +AE +F + P
Sbjct: 425 DACGLVSEKKVSEQIHGFCIKFGTAFNPCIQT--ALLDMCTRCERMADAEEMFDQWPSNL 482
Query: 169 DVS--WNIMMGGYGQNGQIEKALDLFRRMPEPER-------------------------- 200
D S ++GGY +NG +KA+ LF R ++
Sbjct: 483 DSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQ 542
Query: 201 ------------NVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVDC 244
++ N++I +C +DA FN M RE DV SW +++ C
Sbjct: 543 IHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTM--REHDVISWNSLISC 596