Miyakogusa Predicted Gene

Lj0g3v0155949.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0155949.1 Non Chatacterized Hit- tr|J3L1L7|J3L1L7_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB01G3,30,3e-19,coiled-coil,NULL; seg,NULL,CUFF.9634.1
         (180 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G22882.1 | Symbols:  | Galactose-binding protein | chr1:80991...    97   4e-21
AT1G71360.1 | Symbols:  | Galactose-binding protein | chr1:26892...    92   2e-19
AT4G23950.1 | Symbols:  | Galactose-binding protein | chr4:12442...    72   3e-13
AT4G23950.2 | Symbols:  | Galactose-binding protein | chr4:12442...    68   4e-12

>AT1G22882.1 | Symbols:  | Galactose-binding protein |
           chr1:8099150-8101220 FORWARD LENGTH=660
          Length = 660

 Score = 97.4 bits (241), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 86/142 (60%)

Query: 1   MPGDTVLKILMQKVQNLDINLSFLEQYMEVLNSRYVNIFKLYSKDIGEKDLLIRMIKEDI 60
           MPGDTVLKILMQK+++LD+NLS LE+Y+E LN RY NIFK   ++ G ++  I  ++ D+
Sbjct: 494 MPGDTVLKILMQKLRSLDLNLSILERYLEELNLRYGNIFKEMDREAGVREKAIVALRLDL 553

Query: 61  RSFLHQQEVMMKDVSELDSWKSHFSVQFDHIRRDNAMLRNEVEKVLENQVSLEDKGVVVF 120
                +QE M+ +  E+  W+     + +   ++   +R  +E+V +    +E K + VF
Sbjct: 554 EGMKERQEGMVSEAEEMKEWRKRVEAEMEKAEKEKENIRQSLEQVSKRLEWMEKKCLTVF 613

Query: 121 LVCVIFSLIAILRLSLDMIISI 142
            VC+ F +IA++ + + M   +
Sbjct: 614 TVCLGFGIIAVIAVVIGMGTGL 635


>AT1G71360.1 | Symbols:  | Galactose-binding protein |
           chr1:26892214-26894166 REVERSE LENGTH=596
          Length = 596

 Score = 92.0 bits (227), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 81/140 (57%)

Query: 1   MPGDTVLKILMQKVQNLDINLSFLEQYMEVLNSRYVNIFKLYSKDIGEKDLLIRMIKEDI 60
           MPGDTVLKILMQK+++LD++LS LE Y+E  + +Y  IFK    +  +++  +  ++ ++
Sbjct: 430 MPGDTVLKILMQKIRSLDVSLSVLESYLEERSLKYGMIFKEMDLEASKREKEVETMRLEV 489

Query: 61  RSFLHQQEVMMKDVSELDSWKSHFSVQFDHIRRDNAMLRNEVEKVLENQVSLEDKGVVVF 120
                ++E   K+  E+  W+     + +    +   ++  +E+VLE    +E KGVVVF
Sbjct: 490 EGMKEREENTKKEAMEMRKWRMRVETELEKAENEKEKVKERLEQVLERLEWMEKKGVVVF 549

Query: 121 LVCVIFSLIAILRLSLDMII 140
            +CV F  IA++ +   M I
Sbjct: 550 TICVGFGTIAVVAVVFGMGI 569


>AT4G23950.1 | Symbols:  | Galactose-binding protein |
           chr4:12442297-12444330 FORWARD LENGTH=561
          Length = 561

 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 89/155 (57%), Gaps = 7/155 (4%)

Query: 6   VLKILMQKVQNLDINLSFLEQYMEVLNSRYVNIFKLYSKDIGEKDLLIRMIKEDIRSFLH 65
           VLK++MQKV+ +++NLS LE  ++ +N +   +    S ++ +  +L+   K DIR    
Sbjct: 394 VLKVMMQKVKLIEMNLSLLEDSVKKMNDKQPEV----SLEMKKTLVLVEKSKADIREITE 449

Query: 66  QQEVMMKDVSELDSWKSHFSVQFDHIRRDNAMLRNEVEKVLENQVSLEDKGVVVFLVCVI 125
            +  M K++ +L+ WK+  + + + + R N+ LR +VEK+++ Q +LE K + V L+ + 
Sbjct: 450 WKGKMEKELRDLELWKTLVASRVESLARGNSALRLDVEKIVKEQANLESKELGVLLISLF 509

Query: 126 FSLIAILRLSLDMIISIYRVLSFNKTIHSRKFYQD 160
           F ++A +RL   +   ++  L  + T  +R  + D
Sbjct: 510 FVVLATIRL---VSTRLWAFLGMSITDKARSLWPD 541


>AT4G23950.2 | Symbols:  | Galactose-binding protein |
           chr4:12442297-12444330 FORWARD LENGTH=562
          Length = 562

 Score = 67.8 bits (164), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 89/156 (57%), Gaps = 8/156 (5%)

Query: 6   VLKILMQKVQNLDINLSFLEQYMEVLNSRYVNIFKLYSKDIGEKDLLIRMIKEDIRSFLH 65
           VLK++MQKV+ +++NLS LE  ++ +N +   +    S ++ +  +L+   K DIR    
Sbjct: 394 VLKVMMQKVKLIEMNLSLLEDSVKKMNDKQPEV----SLEMKKTLVLVEKSKADIREITE 449

Query: 66  QQEVMM-KDVSELDSWKSHFSVQFDHIRRDNAMLRNEVEKVLENQVSLEDKGVVVFLVCV 124
            +  M  K++ +L+ WK+  + + + + R N+ LR +VEK+++ Q +LE K + V L+ +
Sbjct: 450 WKGKMQEKELRDLELWKTLVASRVESLARGNSALRLDVEKIVKEQANLESKELGVLLISL 509

Query: 125 IFSLIAILRLSLDMIISIYRVLSFNKTIHSRKFYQD 160
            F ++A +RL   +   ++  L  + T  +R  + D
Sbjct: 510 FFVVLATIRL---VSTRLWAFLGMSITDKARSLWPD 542