Miyakogusa Predicted Gene

Lj0g3v0155659.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0155659.1 Non Chatacterized Hit- tr|A5B8V3|A5B8V3_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,39.44,2e-19,
,CUFF.9616.1
         (171 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G52330.1 | Symbols:  | Late embryogenesis abundant (LEA) hydr...   100   3e-22
AT1G52330.2 | Symbols:  | Late embryogenesis abundant (LEA) hydr...    99   1e-21
AT4G13270.1 | Symbols:  | Late embryogenesis abundant (LEA) hydr...    92   2e-19

>AT1G52330.1 | Symbols:  | Late embryogenesis abundant (LEA)
           hydroxyproline-rich glycoprotein family |
           chr1:19488962-19489763 FORWARD LENGTH=214
          Length = 214

 Score =  100 bits (250), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 54/132 (40%), Positives = 75/132 (56%), Gaps = 1/132 (0%)

Query: 28  FWPWSPQVRMSKVTGRQVKVHPLPPVRADVWISVAVRVQNRDVYWMDLEEVDVGVKYRGK 87
           FWP  P++++ +V    V VH  P    D+ + V ++V N DVY  D  ++DV + YRGK
Sbjct: 62  FWPSDPRIKIIRVKISHVHVHRRPVPSIDMTLLVTLKVSNADVYSFDFTDLDVTIDYRGK 121

Query: 88  KLGHVESKRWHVRRWGTIHAFGELE-SSALPSADVAHLLQDLSKGKVFFHTVTEVTGYVG 146
            LGHV S   HV  +G+ +   E E    +   DV HL+ DL+KG V F TVTE  G +G
Sbjct: 122 TLGHVSSDGGHVTAFGSSYLDAEAELDGVMVFPDVIHLIHDLAKGSVEFDTVTETNGKLG 181

Query: 147 FLSFPLPIEFKV 158
            L F  P++ KV
Sbjct: 182 VLFFRFPLKAKV 193


>AT1G52330.2 | Symbols:  | Late embryogenesis abundant (LEA)
           hydroxyproline-rich glycoprotein family |
           chr1:19488962-19489645 FORWARD LENGTH=227
          Length = 227

 Score = 99.0 bits (245), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 52/131 (39%), Positives = 74/131 (56%), Gaps = 1/131 (0%)

Query: 28  FWPWSPQVRMSKVTGRQVKVHPLPPVRADVWISVAVRVQNRDVYWMDLEEVDVGVKYRGK 87
           FWP  P++++ +V    V VH  P    D+ + V ++V N DVY  D  ++DV + YRGK
Sbjct: 62  FWPSDPRIKIIRVKISHVHVHRRPVPSIDMTLLVTLKVSNADVYSFDFTDLDVTIDYRGK 121

Query: 88  KLGHVESKRWHVRRWGTIHAFGELE-SSALPSADVAHLLQDLSKGKVFFHTVTEVTGYVG 146
            LGHV S   HV  +G+ +   E E    +   DV HL+ DL+KG V F TVTE  G +G
Sbjct: 122 TLGHVSSDGGHVTAFGSSYLDAEAELDGVMVFPDVIHLIHDLAKGSVEFDTVTETNGKLG 181

Query: 147 FLSFPLPIEFK 157
            L F  P++ +
Sbjct: 182 VLFFRFPLKVR 192


>AT4G13270.1 | Symbols:  | Late embryogenesis abundant (LEA)
           hydroxyproline-rich glycoprotein family |
           chr4:7731280-7732902 FORWARD LENGTH=215
          Length = 215

 Score = 91.7 bits (226), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 82/150 (54%), Gaps = 1/150 (0%)

Query: 10  CCCKFTVVVALCLAGAVFFWPWSPQVRMSKVTGRQVKVHPLPPVRADVWISVAVRVQNRD 69
           C   FT V+ L  A     +P  P + +S++    + V     +  D+  S+ ++V+NRD
Sbjct: 45  CSLLFTAVILLLSAAVYLLYPSDPDITVSRINLNHISVVDSHKIALDLSFSLTIKVRNRD 104

Query: 70  VYWMDLEEVDVGVKYRGKKLGHVESKRWHVRRWGTIHAFGELESSALPSA-DVAHLLQDL 128
            + +D + + V + YRG++LG V+SK  H++   + +    LE   L    DV +L+ DL
Sbjct: 105 FFSLDYDSLVVSIGYRGRELGLVKSKGGHLKARDSSYIDATLELDGLEVVHDVIYLIGDL 164

Query: 129 SKGKVFFHTVTEVTGYVGFLSFPLPIEFKV 158
           +KG + F T+ +V G +G L F +PI+ KV
Sbjct: 165 AKGVIPFDTIAQVQGDLGVLLFNIPIQGKV 194