Miyakogusa Predicted Gene

Lj0g3v0154989.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0154989.1 Non Chatacterized Hit- tr|I1K926|I1K926_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,72.18,0,WD40
repeat-like,WD40-repeat-containing domain; seg,NULL; no
description,WD40/YVTN repeat-like-conta,CUFF.9785.1
         (1095 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G31160.1 | Symbols: DCAF1 | DDB1-CUL4 associated factor 1 | c...   629   e-180
AT2G33340.3 | Symbols: MAC3B | MOS4-associated  complex 3B | chr...    51   4e-06
AT2G33340.2 | Symbols: MAC3B | MOS4-associated  complex 3B | chr...    51   5e-06
AT2G33340.1 | Symbols: MAC3B | MOS4-associated  complex 3B | chr...    51   5e-06

>AT4G31160.1 | Symbols: DCAF1 | DDB1-CUL4 associated factor 1 |
            chr4:15145936-15152939 FORWARD LENGTH=1883
          Length = 1883

 Score =  629 bits (1623), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 334/628 (53%), Positives = 431/628 (68%), Gaps = 47/628 (7%)

Query: 399  IAPSSLAQPPSTQEAPSVQLQWPSGRA-PGFLSDKLKLNAGDDDVLGSDVSTRIGSAFTX 457
            +A S+L  P      P  Q QWPSGRA  GF     K+NA D+D      S+R  +A + 
Sbjct: 1184 LASSTLEMP-----TPVAQQQWPSGRANCGFCPSIPKINARDEDP-----SSRGNAAPSA 1233

Query: 458  XXXXXXXXXXXXXXXRHQL--DDSRQSSVRKVSSTSKGSSETAIVSETPSKLLEKHNIDS 515
                           R Q    D+   S ++++  S      A  SET ++L+ K+++D+
Sbjct: 1234 KKKQLTFSPSFSSQSRKQSFSHDALPQSTQRINCCSNSDPALADTSETAAELVLKNDLDA 1293

Query: 516  ESQYKTPIILPMKRKLSDLKDTRVLSSSRKRLIAGDHGIRSPICITPNTVRKTNLQTDAI 575
            ++Q+KTPI  P KRKLS+L+D+ V     KR+  G+              R+ +   D  
Sbjct: 1294 DAQFKTPISFPRKRKLSELRDSSVPG---KRIDLGE--------------RRNSTFADGS 1336

Query: 576  RFPTPSSNLRNQQGRCSVDYVDENQNSMSNLGQFTPSSAA--INDLQHSNSERMTLDSIV 633
               TP+S L            D NQ+  S LGQ TP+S     +D Q SN ER++LDS+V
Sbjct: 1337 GLQTPASAL------------DANQSGSSRLGQMTPASQLRLPSDPQPSNPERLSLDSLV 1384

Query: 634  VQYLKHQHLQCPAXXXXXXXXXXXXXXVCPEPKRSLDAASNVTARFKRREFKFIYGGVHG 693
            VQYLKHQH QC A              VCPEPKR L+A  N+T R   RE +  Y GVHG
Sbjct: 1385 VQYLKHQHRQCLAPITTLPPVSLLHPHVCPEPKRLLEAPLNMTGRLGTRELQSFYSGVHG 1444

Query: 694  NRKDRQFVYSRFRPWRTCRDDAGALLTCITFLGDSSRIAVGSHNGEVKLFDSNNNNVVES 753
            NR+DRQFV+SRF+ WR+ RD+  AL TCI  LG ++ IAVGSH GE+K+F++++ +++ES
Sbjct: 1445 NRRDRQFVFSRFKSWRSFRDET-ALFTCIALLGGTNHIAVGSHAGEIKIFEASSGSMLES 1503

Query: 754  FTGHQYPLTLVQSFVSGETQLLLSSSSQDVRLWDASSLSSGTTHSFDGCKAARFSNSGNV 813
             +GHQ P+TLVQ +VS +TQLLLSSSS DV+LWDASS++ G  HSFDGCKAA+FSNSG  
Sbjct: 1504 VSGHQAPVTLVQPYVSRDTQLLLSSSSSDVQLWDASSITGGPRHSFDGCKAAKFSNSGLQ 1563

Query: 814  FAALSSESAQREILLYDIQTCQLESKLTDTFTNFTGRGHVYPLIHFNPSDSMLLWNGVLW 873
            FAALS E++++++LLYD+QTC    KLTDT T  + R + Y L+HF+P D+++LWNGVLW
Sbjct: 1564 FAALSCEASRKDVLLYDVQTCSPCQKLTDTVT--SSRSNPYSLVHFSPCDTLILWNGVLW 1621

Query: 874  DQRVSEPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFSLLRSVPSLDQTEITFNAH 933
            D+R+ E V RFDQFTDYGGGGFHP+ NEVIINSE+WD+R F LLRSVPSLDQT ITFN+ 
Sbjct: 1622 DRRIPEKVRRFDQFTDYGGGGFHPSRNEVIINSEIWDMRTFKLLRSVPSLDQTAITFNSR 1681

Query: 934  GDVLYAILRRKIEDVMSAVNTRRVKHPLFAAFRTVDAVNYSEIATIPVDRCVLDFATEPT 993
            GDV+YA+LRR IEDVMSAV+TRRVKHPLFAAFRT+DA+NYS+IATIPVDRC+LDFATEPT
Sbjct: 1682 GDVIYAMLRRNIEDVMSAVHTRRVKHPLFAAFRTLDAINYSDIATIPVDRCLLDFATEPT 1741

Query: 994  DSIVGLVTMDDQDEMFASARIYEIGRRR 1021
            DS +GL+TM+DQ++MF+SAR+YEIGRRR
Sbjct: 1742 DSFLGLITMEDQEDMFSSARMYEIGRRR 1769



 Score =  373 bits (958), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 234/445 (52%), Positives = 272/445 (61%), Gaps = 38/445 (8%)

Query: 1    MDAVFLQLQKDRKLGSSFVRTRWPAVDKFLACNGHVTMLELCQGPPPPVERYLHDLLQYA 60
            +DA+FLQLQKDR+LG +FV+ +WPAV+ FLA +GHVTMLELCQ PP  V+RYLHDLLQYA
Sbjct: 758  VDAIFLQLQKDRRLGPTFVKAQWPAVNNFLASSGHVTMLELCQTPP--VDRYLHDLLQYA 815

Query: 61   LDVLHIVTLVPSSRKMIVTATLSNNRVGTAVILDAANIVSNHDDPEIIRPALNVLVNLVC 120
              VLHIVT +P  RK I  ATLSNNR G AVILDAANI ++  DPEII+PALNVL+NLVC
Sbjct: 816  FGVLHIVTSIPDGRKAIAHATLSNNRAGIAVILDAANISNSIVDPEIIQPALNVLINLVC 875

Query: 121  PPPSISNKPASVTPGQQSASAQTSKGPMSETRDRTAERNVSDRPVNFSSQTDTREQNAES 180
            PPPS+SNKP  +    Q    Q +  P ++                              
Sbjct: 876  PPPSLSNKPP-LAQNHQPVPGQATTRPSTDV----------------------------- 905

Query: 181  NAVDRDGAAAVNTQTVLAATSGLVGDHRISXXXXXXXXXXXXXXXXXYRQAREAVRANNG 240
             AV            V  A+SGLVGD RI                  YRQAREAVR N+G
Sbjct: 906  -AVGTQSTGNAPQTPVAPASSGLVGDRRIFLGAGTGSAGLAAKLEQVYRQAREAVRGNDG 964

Query: 241  IKVLLHLLQQRIY-SPPXXXXXXXXXXXXXXXXXXXDDIIAHILTKLQVGKKLSELIRDS 299
            IK+LL LLQ RIY +PP                   DD IA ILTKL+VGK LSELIRDS
Sbjct: 965  IKILLKLLQPRIYVNPPATPDCLRALACRVLLGLARDDTIAQILTKLEVGKSLSELIRDS 1024

Query: 300  GSQTHGTEQGRWQAELSQAAIELIGVVTNSGHXXXXXXXXXXXXXXXXIEREAIAAATPI 359
            G Q+ GT+QGRWQAEL+Q A+ELIG+VTNSGH                IER AIAAATPI
Sbjct: 1025 GGQSSGTDQGRWQAELAQVALELIGIVTNSGHATTLTASDAATPTLRRIERAAIAAATPI 1084

Query: 360  SYDSRELLQLIHEYVRASGLSQTASILLKEAQLKPLPSLIAPSSLAQPPSTQE--APSVQ 417
            +YDS+ELL LIHE+++ASGL  TAS LLKEAQL PL    A  S     +TQE   P  Q
Sbjct: 1085 TYDSKELLLLIHEHLQASGLGDTASALLKEAQLTPL-PSSASPSSIAYSTTQEMSTPLAQ 1143

Query: 418  LQWPSGRA-PGFLSDKLKLNAGDDD 441
             QWPSGRA  GF + K K+ A D+D
Sbjct: 1144 EQWPSGRANSGFFTSKPKVCAHDED 1168


>AT2G33340.3 | Symbols: MAC3B | MOS4-associated  complex 3B |
           chr2:14126703-14131000 REVERSE LENGTH=485
          Length = 485

 Score = 51.2 bits (121), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 93/224 (41%), Gaps = 28/224 (12%)

Query: 731 IAVGSHNGEVKLFDSNNNNVVESFTGHQYPLTLVQSFVSGETQLLLSSSSQDVRLW---D 787
           IA G  +    LFD  +  ++ + TGH   +T V+ FV     +L +S+ + VR+W    
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVK-FVGDSDLVLTASADKTVRIWRNPG 295

Query: 788 ASSLSSGTT---HSFDGCKAARFSNSGNVFAALSSESAQREILLYDIQTCQLESKLTDTF 844
             + + G T   HS +  +A     +   F + S +        YD+ +    ++++D  
Sbjct: 296 DGNYACGYTLNDHSAE-VRAVTVHPTNKYFVSASLDGTW---CFYDLSSGSCLAQVSDDS 351

Query: 845 TNFTGRGHVYPLIHFNPSDSMLLWNGV------LWDQRVSEPVHRFDQFT-DYGGGGFHP 897
            N       Y    F+P D ++L  G       +WD +    V +FD  T +     F  
Sbjct: 352 KNVD-----YTAAAFHP-DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSE 405

Query: 898 AGNEVIINSE----VWDLRKFSLLRSVPSLDQTEITFNAHGDVL 937
            G  +   +E    +WDLRK    +S  S D   + F+  G  L
Sbjct: 406 NGYFLATAAEDGVRLWDLRKLRNFKSFLSADANSVEFDPSGSYL 449


>AT2G33340.2 | Symbols: MAC3B | MOS4-associated  complex 3B |
           chr2:14126584-14131000 REVERSE LENGTH=525
          Length = 525

 Score = 50.8 bits (120), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 93/224 (41%), Gaps = 28/224 (12%)

Query: 731 IAVGSHNGEVKLFDSNNNNVVESFTGHQYPLTLVQSFVSGETQLLLSSSSQDVRLW---D 787
           IA G  +    LFD  +  ++ + TGH   +T V+ FV     +L +S+ + VR+W    
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVK-FVGDSDLVLTASADKTVRIWRNPG 295

Query: 788 ASSLSSGTT---HSFDGCKAARFSNSGNVFAALSSESAQREILLYDIQTCQLESKLTDTF 844
             + + G T   HS +  +A     +   F + S +        YD+ +    ++++D  
Sbjct: 296 DGNYACGYTLNDHSAE-VRAVTVHPTNKYFVSASLDGTW---CFYDLSSGSCLAQVSDDS 351

Query: 845 TNFTGRGHVYPLIHFNPSDSMLLWNGV------LWDQRVSEPVHRFDQFT-DYGGGGFHP 897
            N       Y    F+P D ++L  G       +WD +    V +FD  T +     F  
Sbjct: 352 KNVD-----YTAAAFHP-DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSE 405

Query: 898 AGNEVIINSE----VWDLRKFSLLRSVPSLDQTEITFNAHGDVL 937
            G  +   +E    +WDLRK    +S  S D   + F+  G  L
Sbjct: 406 NGYFLATAAEDGVRLWDLRKLRNFKSFLSADANSVEFDPSGSYL 449


>AT2G33340.1 | Symbols: MAC3B | MOS4-associated  complex 3B |
           chr2:14126584-14131000 REVERSE LENGTH=525
          Length = 525

 Score = 50.8 bits (120), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 93/224 (41%), Gaps = 28/224 (12%)

Query: 731 IAVGSHNGEVKLFDSNNNNVVESFTGHQYPLTLVQSFVSGETQLLLSSSSQDVRLW---D 787
           IA G  +    LFD  +  ++ + TGH   +T V+ FV     +L +S+ + VR+W    
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVK-FVGDSDLVLTASADKTVRIWRNPG 295

Query: 788 ASSLSSGTT---HSFDGCKAARFSNSGNVFAALSSESAQREILLYDIQTCQLESKLTDTF 844
             + + G T   HS +  +A     +   F + S +        YD+ +    ++++D  
Sbjct: 296 DGNYACGYTLNDHSAE-VRAVTVHPTNKYFVSASLDGTW---CFYDLSSGSCLAQVSDDS 351

Query: 845 TNFTGRGHVYPLIHFNPSDSMLLWNGV------LWDQRVSEPVHRFDQFT-DYGGGGFHP 897
            N       Y    F+P D ++L  G       +WD +    V +FD  T +     F  
Sbjct: 352 KNVD-----YTAAAFHP-DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSE 405

Query: 898 AGNEVIINSE----VWDLRKFSLLRSVPSLDQTEITFNAHGDVL 937
            G  +   +E    +WDLRK    +S  S D   + F+  G  L
Sbjct: 406 NGYFLATAAEDGVRLWDLRKLRNFKSFLSADANSVEFDPSGSYL 449