Miyakogusa Predicted Gene

Lj0g3v0154829.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0154829.1 Non Chatacterized Hit- tr|F6HX39|F6HX39_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,77.27,0.0000000000002,seg,NULL; NARP1,N-terminal acetyltransferase
A, auxiliary subunit,CUFF.9578.1
         (126 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23730.1 | Symbols:  | Galactose mutarotase-like superfamily ...    60   5e-10
AT3G61610.1 | Symbols:  | Galactose mutarotase-like superfamily ...    53   6e-08
AT5G57330.1 | Symbols:  | Galactose mutarotase-like superfamily ...    49   7e-07
AT3G01590.1 | Symbols:  | Galactose mutarotase-like superfamily ...    49   1e-06
AT3G01590.2 | Symbols:  | Galactose mutarotase-like superfamily ...    49   1e-06
AT5G14500.1 | Symbols:  | aldose 1-epimerase family protein | ch...    47   2e-06

>AT4G23730.1 | Symbols:  | Galactose mutarotase-like superfamily
           protein | chr4:12362955-12364792 FORWARD LENGTH=306
          Length = 306

 Score = 59.7 bits (143), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 25/34 (73%), Positives = 31/34 (91%)

Query: 78  QVDRVYLGSCNVVAVLDHERKRTFMIRKEGLPDV 111
           ++DRVYL S +VVA+ DHERKRTF+I+KEGLPDV
Sbjct: 217 EIDRVYLNSKDVVAIFDHERKRTFLIKKEGLPDV 250


>AT3G61610.1 | Symbols:  | Galactose mutarotase-like superfamily
           protein | chr3:22799480-22801029 FORWARD LENGTH=317
          Length = 317

 Score = 52.8 bits (125), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 24/34 (70%), Positives = 28/34 (82%)

Query: 78  QVDRVYLGSCNVVAVLDHERKRTFMIRKEGLPDV 111
           ++DR YL S  VVAVLDHERKRT++I KEGLPD 
Sbjct: 215 EMDRTYLRSPKVVAVLDHERKRTYVIGKEGLPDT 248


>AT5G57330.1 | Symbols:  | Galactose mutarotase-like superfamily
           protein | chr5:23218392-23220664 FORWARD LENGTH=312
          Length = 312

 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 19/34 (55%), Positives = 28/34 (82%)

Query: 78  QVDRVYLGSCNVVAVLDHERKRTFMIRKEGLPDV 111
           +VD++YL +   +A+LDHE+KRTF+IRK+GL D 
Sbjct: 210 EVDKIYLSTPTKIAILDHEKKRTFVIRKDGLADA 243


>AT3G01590.1 | Symbols:  | Galactose mutarotase-like superfamily
           protein | chr3:226647-228346 FORWARD LENGTH=306
          Length = 306

 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/34 (58%), Positives = 27/34 (79%)

Query: 78  QVDRVYLGSCNVVAVLDHERKRTFMIRKEGLPDV 111
           +VDRVYL +   +AV+DHERKRT  +RKEG+P+ 
Sbjct: 201 EVDRVYLNTPTKIAVIDHERKRTIELRKEGMPNA 234


>AT3G01590.2 | Symbols:  | Galactose mutarotase-like superfamily
           protein | chr3:226647-228346 FORWARD LENGTH=306
          Length = 306

 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/34 (58%), Positives = 27/34 (79%)

Query: 78  QVDRVYLGSCNVVAVLDHERKRTFMIRKEGLPDV 111
           +VDRVYL +   +AV+DHERKRT  +RKEG+P+ 
Sbjct: 201 EVDRVYLNTPTKIAVIDHERKRTIELRKEGMPNA 234


>AT5G14500.1 | Symbols:  | aldose 1-epimerase family protein |
           chr5:4674503-4676368 REVERSE LENGTH=306
          Length = 306

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 18/35 (51%), Positives = 27/35 (77%)

Query: 78  QVDRVYLGSCNVVAVLDHERKRTFMIRKEGLPDVG 112
           +VD+VYL +   +A++DHERKRT  +RKEG+P+  
Sbjct: 201 EVDKVYLNTPTKIAIIDHERKRTIELRKEGMPNAA 235