Miyakogusa Predicted Gene

Lj0g3v0154419.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0154419.1 Non Chatacterized Hit- tr|I1I4B8|I1I4B8_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,36.8,2e-16,seg,NULL; ATP-BINDING CASSETTE
TRANSPORTER-RELATED,NULL; ATP-BINDING CASSETTE
TRANSPORTER,NULL,gene.g11819.t1.1
         (301 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G37010.1 | Symbols: ATNAP12, NAP12 | non-intrinsic ABC protei...   269   2e-72
AT5G60740.1 | Symbols:  | ABC transporter family protein | chr5:...   261   4e-70
AT1G53390.1 | Symbols:  | P-loop containing nucleoside triphosph...   248   3e-66

>AT2G37010.1 | Symbols: ATNAP12, NAP12 | non-intrinsic ABC protein
           12 | chr2:15541720-15546159 FORWARD LENGTH=1082
          Length = 1082

 Score =  269 bits (687), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 133/263 (50%), Positives = 163/263 (61%), Gaps = 50/263 (19%)

Query: 42  IYKELQNIATLLNKDIKANLGFCIKNVGLVNSKNNRPWKXXXXXXXXXXXXGEVNCLGVK 101
           IY  LQN+ T+L  D+  +LG+CIKN+                                 
Sbjct: 51  IYTRLQNLKTVLKADVDRDLGYCIKNL--------------------------------- 77

Query: 102 HADLAPLVLEVKKNDWEEAFDFKGKLDFIDSCVKKK-GDFRDRICTATEIRYYFHGFVEQ 160
                       K DW EAF+F   LDF+ +CVKK  GD   R+C+A EI++YF  FV +
Sbjct: 78  ------------KGDWNEAFNFDKNLDFLSNCVKKNDGDLTLRLCSAAEIKFYFSSFVRR 125

Query: 161 GGASSANYAKPNKNCNLTSWVSGCEPGWSCSAG--KNIDLKKDFKEIPYRTKNCQPCCEG 218
             A++  + KPN NCNL  WVSGCEPGWSC+A   K  DL    K +P RT+ CQPCCEG
Sbjct: 126 DEATTV-HVKPNINCNLAKWVSGCEPGWSCNADDEKRFDLNNG-KILPSRTRKCQPCCEG 183

Query: 219 FFCPQGLTCMIPCPLGSYCPMAKLNHTTGTCDPYSYQIPQGETNHTCGSADIWSGVVNNS 278
           FFCPQGL CMIPCPLG+YCP+AKLN TTG C+PY+YQIP G+ NHTCGSAD W    ++ 
Sbjct: 184 FFCPQGLACMIPCPLGAYCPLAKLNKTTGFCEPYNYQIPPGKLNHTCGSADSWVDAESSG 243

Query: 279 DIFCSPGSYCPTTTRKVSCDSGY 301
           D+FCSPGSYCPTT RKV+C SG+
Sbjct: 244 DMFCSPGSYCPTTIRKVTCSSGH 266


>AT5G60740.1 | Symbols:  | ABC transporter family protein |
           chr5:24425824-24430269 REVERSE LENGTH=1109
          Length = 1109

 Score =  261 bits (667), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 129/276 (46%), Positives = 167/276 (60%), Gaps = 52/276 (18%)

Query: 30  DNAFAPSFYSEEIYKELQNIATLLNKDIKANLGFCIKNVGLVNSKNNRPWKXXXXXXXXX 89
           DN  A   Y++ ++ ++ N+  +   DIK  LGFCI NV                     
Sbjct: 38  DNPAANRLYNQFVFDKISNLTEVFEDDIKRELGFCITNV--------------------- 76

Query: 90  XXXGEVNCLGVKHADLAPLVLEVKKNDWEEAFDFKGKLDFIDSCVKK-KGDFRDRICTAT 148
                                   K D+ EAF+F  K DF+++C K  KGD   RICTA 
Sbjct: 77  ------------------------KEDYNEAFNFSTKPDFLNACGKTTKGDMMQRICTAA 112

Query: 149 EIRYYFHGFVEQGGASSA-NYAKPNKNCNLTSWVSGCEPGWSCSAGKNI--DLKKDFKEI 205
           E+R YF+G +  GGA  A NY KPNKNCNL+SW+SGCEPGW+C   K++  DLK D K +
Sbjct: 113 EVRIYFNGLL--GGAKRATNYLKPNKNCNLSSWMSGCEPGWACRTAKDVKVDLKDD-KNV 169

Query: 206 PYRTKNCQPCCEGFFCPQGLTCMIPCPLGSYCPMAKLNHTTGTCDPYSYQIPQGETNHTC 265
           P RT+ C PCC GFFCP+G+TCMIPCPLG+YCP A LN TTG CDPY YQ+P G+ NHTC
Sbjct: 170 PVRTQQCAPCCAGFFCPRGITCMIPCPLGAYCPEANLNRTTGLCDPYHYQLPSGQPNHTC 229

Query: 266 GSADIWSGVVNNSDIFCSPGSYCPTTTRKVSCDSGY 301
           G ADIW+ + ++S++FCS GS+CP+T  K+ C  G+
Sbjct: 230 GGADIWADIGSSSEVFCSAGSFCPSTIDKLPCTKGH 265


>AT1G53390.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:19918197-19923579
           FORWARD LENGTH=1109
          Length = 1109

 Score =  248 bits (633), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 108/189 (57%), Positives = 142/189 (75%), Gaps = 6/189 (3%)

Query: 116 DWEEAFDFKGKLDFIDSCVKK-KGDFRDRICTATEIRYYFHGFVEQGGASSANYAKPNKN 174
           DW  AF+F   L+F+ SC+KK +G    RICTA E+++YF+GF  +   ++  Y KPN N
Sbjct: 97  DWNRAFNFSSNLNFLSSCIKKTQGSIGKRICTAAEMKFYFNGFFNK--TNNPGYLKPNVN 154

Query: 175 CNLTSWVSGCEPGWSCSAG--KNIDLKKDFKEIPYRTKNCQPCCEGFFCPQGLTCMIPCP 232
           CNLTSWVSGCEPGW CS    + +DL+   K+ P R +NC PCCEGFFCP+GLTCMIPCP
Sbjct: 155 CNLTSWVSGCEPGWGCSVDPTEQVDLQNS-KDFPERRRNCMPCCEGFFCPRGLTCMIPCP 213

Query: 233 LGSYCPMAKLNHTTGTCDPYSYQIPQGETNHTCGSADIWSGVVNNSDIFCSPGSYCPTTT 292
           LG++CP+A LN TT  C+PY+YQ+P G  NHTCG A++W+ + ++ ++FCS GSYCPTTT
Sbjct: 214 LGAHCPLATLNKTTSLCEPYTYQLPSGRPNHTCGGANVWADIRSSGEVFCSAGSYCPTTT 273

Query: 293 RKVSCDSGY 301
           +KV CDSG+
Sbjct: 274 QKVPCDSGH 282