Miyakogusa Predicted Gene

Lj0g3v0154209.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0154209.1 tr|I3SFT9|I3SFT9_LOTJA Golgi SNAP receptor
complex member 1 OS=Lotus japonicus PE=2 SV=1,99.52,0,GOS-28 SNARE-
RELATED,Golgi SNAP receptor complex, subunit 1;
V-SNARE_C,NULL,CUFF.9553.1
         (211 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G45200.1 | Symbols: GOS12, ATGOS12 | golgi snare 12 | chr2:18...   378   e-105
AT2G45200.2 | Symbols: GOS12 | golgi snare 12 | chr2:18637689-18...   367   e-102
AT1G15880.1 | Symbols: GOS11, atgos11 | golgi snare 11 | chr1:54...   100   9e-22

>AT2G45200.1 | Symbols: GOS12, ATGOS12 | golgi snare 12 |
           chr2:18637689-18639640 REVERSE LENGTH=239
          Length = 239

 Score =  378 bits (971), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 182/211 (86%), Positives = 199/211 (94%)

Query: 1   MRDSNLELQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDGGSPPLGSSRSW 60
           M +S+L+LQESGWEELR+EARKIEGDLDVKLSSYAKLGARFTQGGYVD GSP +GS RSW
Sbjct: 1   MTESSLDLQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQGGYVDTGSPTVGSGRSW 60

Query: 61  KSMEMEIQSLLEKLLDINDSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRIKGNIN 120
           KSMEMEIQSLLEKLLDINDSMSRCAASA P TSVTQKLARHRDILHE+TQEFRRIKGNIN
Sbjct: 61  KSMEMEIQSLLEKLLDINDSMSRCAASAAPTTSVTQKLARHRDILHEYTQEFRRIKGNIN 120

Query: 121 SMREHAELLTSVRDDISDFKTSGSMSPRMQLLRERAAIHGSISHIDDVISQAQATRSVLG 180
           S+REHAELL+SVRDDIS++K SGSMSP +Q+LRERA+IHGSISHIDDVI QAQATR+VLG
Sbjct: 121 SLREHAELLSSVRDDISEYKASGSMSPGVQVLRERASIHGSISHIDDVIGQAQATRAVLG 180

Query: 181 SQRALFGDVQGKVKVLGDKFPIIRSLLGSIR 211
           SQR+LF DVQGKVK LGDKFP+IR LLGSI+
Sbjct: 181 SQRSLFSDVQGKVKNLGDKFPVIRGLLGSIK 211


>AT2G45200.2 | Symbols: GOS12 | golgi snare 12 |
           chr2:18637689-18639640 REVERSE LENGTH=257
          Length = 257

 Score =  367 bits (943), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 182/229 (79%), Positives = 199/229 (86%), Gaps = 18/229 (7%)

Query: 1   MRDSNLELQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQG---------------- 44
           M +S+L+LQESGWEELR+EARKIEGDLDVKLSSYAKLGARFTQG                
Sbjct: 1   MTESSLDLQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQGDTDLVMNYEKVLKCVL 60

Query: 45  --GYVDGGSPPLGSSRSWKSMEMEIQSLLEKLLDINDSMSRCAASAGPATSVTQKLARHR 102
             GYVD GSP +GS RSWKSMEMEIQSLLEKLLDINDSMSRCAASA P TSVTQKLARHR
Sbjct: 61  VSGYVDTGSPTVGSGRSWKSMEMEIQSLLEKLLDINDSMSRCAASAAPTTSVTQKLARHR 120

Query: 103 DILHEFTQEFRRIKGNINSMREHAELLTSVRDDISDFKTSGSMSPRMQLLRERAAIHGSI 162
           DILHE+TQEFRRIKGNINS+REHAELL+SVRDDIS++K SGSMSP +Q+LRERA+IHGSI
Sbjct: 121 DILHEYTQEFRRIKGNINSLREHAELLSSVRDDISEYKASGSMSPGVQVLRERASIHGSI 180

Query: 163 SHIDDVISQAQATRSVLGSQRALFGDVQGKVKVLGDKFPIIRSLLGSIR 211
           SHIDDVI QAQATR+VLGSQR+LF DVQGKVK LGDKFP+IR LLGSI+
Sbjct: 181 SHIDDVIGQAQATRAVLGSQRSLFSDVQGKVKNLGDKFPVIRGLLGSIK 229


>AT1G15880.1 | Symbols: GOS11, atgos11 | golgi snare 11 |
           chr1:5458718-5460089 REVERSE LENGTH=223
          Length = 223

 Score =  100 bits (248), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 107/203 (52%), Gaps = 14/203 (6%)

Query: 11  SGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDGGSPPLGSSRSWKS-MEMEIQS 69
           S W+ LRK+ARKIE  LD ++ SY +L +           +  L  S   +S +E  I  
Sbjct: 5   SSWDALRKQARKIEAQLDEQMHSYRRLVS-----------TKALSKSDGNESDLEAGIDL 53

Query: 70  LLEKLLDINDSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRIKGNINSMREHAELL 129
           LL +L  +N  M +   S+G +  V+  L RH++IL + TQEF R + ++ + +EHA LL
Sbjct: 54  LLRQLQQVNAQM-QAWVSSGGSEMVSHTLTRHQEILQDLTQEFYRHRSSLRAKQEHASLL 112

Query: 130 TSVRD-DISDFKTSGSMSPRMQLLRERAAIHGSISHIDDVISQAQATRSVLGSQRALFGD 188
              R+ D +             L++E   I+ + + +D VISQAQAT   L  QR+ FG 
Sbjct: 113 EDFREFDRTRLDLEDGYGSEQALIKEHMGINRNTAQMDGVISQAQATLGTLVFQRSTFGG 172

Query: 189 VQGKVKVLGDKFPIIRSLLGSIR 211
           +  K+  +  + P + ++L +I+
Sbjct: 173 INSKLSNVASRLPTVNTILAAIK 195