Miyakogusa Predicted Gene
- Lj0g3v0152909.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0152909.1 Non Chatacterized Hit- tr|I3J255|I3J255_ORENI
Uncharacterized protein (Fragment) OS=Oreochromis
nilo,32.35,6e-19,LRR_6,NULL; RNI-like,NULL; Leucine-rich repeat - CC
(cysteine-containin,Leucine-rich repeat, cystein,CUFF.9456.1
(280 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G21410.1 | Symbols: SKP2A | F-box/RNI-like superfamily protei... 414 e-116
AT1G77000.2 | Symbols: SKP2B | RNI-like superfamily protein | ch... 409 e-115
AT1G77000.1 | Symbols: ATSKP2;2, SKP2B | RNI-like superfamily pr... 409 e-115
AT5G23340.1 | Symbols: | RNI-like superfamily protein | chr5:78... 111 6e-25
AT4G15475.1 | Symbols: | F-box/RNI-like superfamily protein | c... 96 2e-20
AT3G58530.1 | Symbols: | RNI-like superfamily protein | chr3:21... 89 4e-18
AT5G01720.1 | Symbols: | RNI-like superfamily protein | chr5:26... 84 1e-16
AT2G25490.1 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1... 78 6e-15
AT5G25350.1 | Symbols: EBF2 | EIN3-binding F box protein 2 | chr... 77 9e-15
AT5G27920.1 | Symbols: | F-box family protein | chr5:9942063-99... 74 1e-13
AT2G06040.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Leucine-ri... 69 4e-12
AT1G12820.1 | Symbols: AFB3 | auxin signaling F-box 3 | chr1:436... 62 6e-10
AT4G07400.1 | Symbols: VFB3 | VIER F-box proteine 3 | chr4:41978... 61 1e-09
AT4G33210.1 | Symbols: SLOMO | F-box family protein | chr4:16015... 61 1e-09
AT5G21900.1 | Symbols: | RNI-like superfamily protein | chr5:72... 57 1e-08
AT1G55590.1 | Symbols: | RNI-like superfamily protein | chr1:20... 57 1e-08
AT2G44900.1 | Symbols: ARABIDILLO-1, ARABIDILLO1 | ARABIDILLO-1 ... 57 2e-08
AT5G57900.1 | Symbols: SKIP1 | SKP1 interacting partner 1 | chr5... 55 4e-08
AT1G47056.1 | Symbols: VFB1 | VIER F-box proteine 1 | chr1:17276... 55 7e-08
AT3G60350.1 | Symbols: ARABIDILLO-2, ARABIDILLO2 | ARABIDILLO-2 ... 53 2e-07
AT3G07550.2 | Symbols: | RNI-like superfamily protein | chr3:24... 53 2e-07
AT3G07550.1 | Symbols: | RNI-like superfamily protein | chr3:24... 53 2e-07
AT5G07670.1 | Symbols: | RNI-like superfamily protein | chr5:24... 52 3e-07
AT5G49980.1 | Symbols: AFB5 | auxin F-box protein 5 | chr5:20334... 52 4e-07
AT4G30640.1 | Symbols: | RNI-like superfamily protein | chr4:14... 52 5e-07
AT3G26810.1 | Symbols: AFB2 | auxin signaling F-box 2 | chr3:986... 51 8e-07
AT5G51370.1 | Symbols: | RNI-like superfamily protein | chr5:20... 51 9e-07
AT1G80630.1 | Symbols: | RNI-like superfamily protein | chr1:30... 51 1e-06
AT2G17020.1 | Symbols: | F-box/RNI-like superfamily protein | c... 50 2e-06
AT3G50080.1 | Symbols: VFB2 | VIER F-box proteine 2 | chr3:18572... 50 2e-06
AT3G62980.1 | Symbols: TIR1 | F-box/RNI-like superfamily protein... 49 4e-06
AT4G05497.1 | Symbols: | RNI-like superfamily protein | chr4:27... 48 9e-06
AT1G80570.1 | Symbols: | RNI-like superfamily protein | chr1:30... 48 1e-05
AT1G80570.3 | Symbols: | RNI-like superfamily protein | chr1:30... 48 1e-05
>AT1G21410.1 | Symbols: SKP2A | F-box/RNI-like superfamily protein |
chr1:7497479-7499386 FORWARD LENGTH=360
Length = 360
Score = 414 bits (1065), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/283 (72%), Positives = 237/283 (83%), Gaps = 3/283 (1%)
Query: 1 MNNLVLSLVPKFKKLETLILRQDKAQLEDSTVETIANCCRDLQILDLSKSFKLTDRSLYA 60
MN+LVLSLVPKF KL+TL LRQDK QLED+ VE IAN C +LQ LDLSKS K+TDRSLYA
Sbjct: 78 MNSLVLSLVPKFVKLQTLNLRQDKPQLEDNAVEAIANHCHELQELDLSKSLKITDRSLYA 137
Query: 61 IAHGCGDLIKLNISGCSAFSDNALAYLAIFCRRLKFLNLWGCVQAASDTALQAVGQYCNQ 120
+AHGC DL KLN+SGC++FSD A+AYL FCR+LK LNL GCV+A +D AL+A+G CNQ
Sbjct: 138 LAHGCPDLTKLNLSGCTSFSDTAIAYLTRFCRKLKVLNLCGCVKAVTDNALEAIGNNCNQ 197
Query: 121 LQSLNLGWCDNVCDVGVMSLAYGCPDLRSIDLCGCIRITDDSVIALANNCPHLRSLGLYY 180
+QSLNLGWC+N+ D GVMSLAYGCPDLR++DLCGC+ ITD+SV+ALA+ C HLRSLGLYY
Sbjct: 198 MQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCGCVLITDESVVALADWCVHLRSLGLYY 257
Query: 181 CQNITDRAMYCLAQSKVNNR--MWGNV-KGANDEEGLRTLNISQCTALTPLAVQAVCDSF 237
C+NITDRAMY LAQS V N+ W +V KG DEEGLR+LNISQCTALTP AVQAVCDSF
Sbjct: 258 CRNITDRAMYSLAQSGVKNKPGSWKSVKKGKYDEEGLRSLNISQCTALTPSAVQAVCDSF 317
Query: 238 PSLHTCPVRHSLIMSGCLSLMSVHCACAGHAHRAITNFPHPAH 280
P+LHTC RHSL+MSGCL+L +VHCAC AHRA PHPAH
Sbjct: 318 PALHTCSGRHSLVMSGCLNLTTVHCACILQAHRAHNAVPHPAH 360
>AT1G77000.2 | Symbols: SKP2B | RNI-like superfamily protein |
chr1:28940888-28942401 FORWARD LENGTH=360
Length = 360
Score = 409 bits (1052), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/283 (71%), Positives = 234/283 (82%), Gaps = 3/283 (1%)
Query: 1 MNNLVLSLVPKFKKLETLILRQDKAQLEDSTVETIANCCRDLQILDLSKSFKLTDRSLYA 60
MN+LVLSL PKF KL+TL+LRQDK QLED+ VE IAN C +LQ LDLSKS K+TD SLY+
Sbjct: 78 MNSLVLSLAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKSSKITDHSLYS 137
Query: 61 IAHGCGDLIKLNISGCSAFSDNALAYLAIFCRRLKFLNLWGCVQAASDTALQAVGQYCNQ 120
+A GC +L KLN+SGC++FSD ALA+L FCR+LK LNL GCV+A SD LQA+G+ CNQ
Sbjct: 138 LARGCTNLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQ 197
Query: 121 LQSLNLGWCDNVCDVGVMSLAYGCPDLRSIDLCGCIRITDDSVIALANNCPHLRSLGLYY 180
LQSLNLGWC+N+ D GVMSLAYGCPDLR++DLC C+ ITD+SV+ALAN C HLRSLGLYY
Sbjct: 198 LQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCSCVLITDESVVALANRCIHLRSLGLYY 257
Query: 181 CQNITDRAMYCLAQSKVNNR--MWGNV-KGANDEEGLRTLNISQCTALTPLAVQAVCDSF 237
C+NITDRAMY LAQS V N+ MW V KG DEEGLR+LNISQCT LTP AVQAVCD+F
Sbjct: 258 CRNITDRAMYSLAQSGVKNKHEMWRAVKKGKFDEEGLRSLNISQCTYLTPSAVQAVCDTF 317
Query: 238 PSLHTCPVRHSLIMSGCLSLMSVHCACAGHAHRAITNFPHPAH 280
P+LHTC RHSL+MSGCL+L SVHCAC AHR T +PHPAH
Sbjct: 318 PALHTCSGRHSLVMSGCLNLQSVHCACILQAHRTHTVYPHPAH 360
>AT1G77000.1 | Symbols: ATSKP2;2, SKP2B | RNI-like superfamily
protein | chr1:28940888-28942401 FORWARD LENGTH=360
Length = 360
Score = 409 bits (1052), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/283 (71%), Positives = 234/283 (82%), Gaps = 3/283 (1%)
Query: 1 MNNLVLSLVPKFKKLETLILRQDKAQLEDSTVETIANCCRDLQILDLSKSFKLTDRSLYA 60
MN+LVLSL PKF KL+TL+LRQDK QLED+ VE IAN C +LQ LDLSKS K+TD SLY+
Sbjct: 78 MNSLVLSLAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKSSKITDHSLYS 137
Query: 61 IAHGCGDLIKLNISGCSAFSDNALAYLAIFCRRLKFLNLWGCVQAASDTALQAVGQYCNQ 120
+A GC +L KLN+SGC++FSD ALA+L FCR+LK LNL GCV+A SD LQA+G+ CNQ
Sbjct: 138 LARGCTNLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQ 197
Query: 121 LQSLNLGWCDNVCDVGVMSLAYGCPDLRSIDLCGCIRITDDSVIALANNCPHLRSLGLYY 180
LQSLNLGWC+N+ D GVMSLAYGCPDLR++DLC C+ ITD+SV+ALAN C HLRSLGLYY
Sbjct: 198 LQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCSCVLITDESVVALANRCIHLRSLGLYY 257
Query: 181 CQNITDRAMYCLAQSKVNNR--MWGNV-KGANDEEGLRTLNISQCTALTPLAVQAVCDSF 237
C+NITDRAMY LAQS V N+ MW V KG DEEGLR+LNISQCT LTP AVQAVCD+F
Sbjct: 258 CRNITDRAMYSLAQSGVKNKHEMWRAVKKGKFDEEGLRSLNISQCTYLTPSAVQAVCDTF 317
Query: 238 PSLHTCPVRHSLIMSGCLSLMSVHCACAGHAHRAITNFPHPAH 280
P+LHTC RHSL+MSGCL+L SVHCAC AHR T +PHPAH
Sbjct: 318 PALHTCSGRHSLVMSGCLNLQSVHCACILQAHRTHTVYPHPAH 360
>AT5G23340.1 | Symbols: | RNI-like superfamily protein |
chr5:7856314-7857983 FORWARD LENGTH=405
Length = 405
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 138/276 (50%), Gaps = 44/276 (15%)
Query: 12 FKKLETLILRQDKAQLEDSTVETIANCCRDLQILDLSKSFKLTDRSLYAIAHGCGDLIKL 71
FK L L L K + D+ + +I C LQ LD+S KL+D+ L A+A GC DL L
Sbjct: 97 FKFLRVLNLHNCKG-ITDTGLASIGRCLSLLQFLDVSYCRKLSDKGLSAVAEGCHDLRAL 155
Query: 72 NISGCSAFSDNALAYLAIFCRRLKFLNLWGCVQAASDTALQAVGQYCNQLQSLNLGWCDN 131
+++GC +D +L L+ CR L+ L L GC +D+ L + + C +++SL++ C N
Sbjct: 156 HLAGCRFITDESLKSLSERCRDLEALGLQGCTNI-TDSGLADLVKGCRKIKSLDINKCSN 214
Query: 132 VCDVGVMSLAYGC---------------------------PDLRSIDLCGCIRITDDSVI 164
V D GV S+A C +L ++ + GC I+D+S++
Sbjct: 215 VGDAGVSSVAKACASSLKTLKLLDCYKVGNESISSLAQFCKNLETLIIGGCRDISDESIM 274
Query: 165 ALANNCPH-LRSLGLYYCQNITDRAMYCLAQ-------------SKVNNRMWGNVKGAND 210
LA++C L++L + +C NI+D ++ C+ + +V + + ++ G++D
Sbjct: 275 LLADSCKDSLKNLRMDWCLNISDSSLSCILKQCKNLEALDIGCCEEVTDTAFRDL-GSDD 333
Query: 211 EEGLRTLNISQCTALTPLAVQAVCDSFPSLHTCPVR 246
GL+ L +S CT +T + + D SL VR
Sbjct: 334 VLGLKVLKVSNCTKITVTGIGKLLDKCSSLEYIDVR 369
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 7/157 (4%)
Query: 45 LDLSKSFK------LTDRSLYAIAHGCGDLIKLNISGCSAFSDNALAYLAIFCRRLKFLN 98
LDLS+S +TD L I+ G L LN+ C +D LA + L+FL+
Sbjct: 71 LDLSQSISRSFYPGVTDSDLAVISEGFKFLRVLNLHNCKGITDTGLASIGRCLSLLQFLD 130
Query: 99 LWGCVQAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGVMSLAYGCPDLRSIDLCGCIRI 158
+ C + SD L AV + C+ L++L+L C + D + SL+ C DL ++ L GC I
Sbjct: 131 VSYC-RKLSDKGLSAVAEGCHDLRALHLAGCRFITDESLKSLSERCRDLEALGLQGCTNI 189
Query: 159 TDDSVIALANNCPHLRSLGLYYCQNITDRAMYCLAQS 195
TD + L C ++SL + C N+ D + +A++
Sbjct: 190 TDSGLADLVKGCRKIKSLDINKCSNVGDAGVSSVAKA 226
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 41/155 (26%)
Query: 105 AASDTALQAVGQYCNQLQSLNLGWCDNVCDVGVMSL------------------------ 140
+D+ L + + L+ LNL C + D G+ S+
Sbjct: 84 GVTDSDLAVISEGFKFLRVLNLHNCKGITDTGLASIGRCLSLLQFLDVSYCRKLSDKGLS 143
Query: 141 --AYGCPDLRSIDLCGCIRITDDSVIALANNCPHLRSLGLYYCQNITDRAMYCLAQSKVN 198
A GC DLR++ L GC ITD+S+ +L+ C L +LGL C NITD + L
Sbjct: 144 AVAEGCHDLRALHLAGCRFITDESLKSLSERCRDLEALGLQGCTNITDSGLADL------ 197
Query: 199 NRMWGNVKGANDEEGLRTLNISQCTALTPLAVQAV 233
VKG +++L+I++C+ + V +V
Sbjct: 198 ------VKGCRK---IKSLDINKCSNVGDAGVSSV 223
>AT4G15475.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8845927-8848701 FORWARD LENGTH=610
Length = 610
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 17/215 (7%)
Query: 26 QLEDSTVETIANCCRDLQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISGCSAFSDNALA 85
D + I + L+ L LS + ++ + L AIAHGC +L ++ I+GC +
Sbjct: 306 HFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGTRGIE 365
Query: 86 YLAIFCRRLKFLNLWGCVQAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGVMSLAYGCP 145
+ C RLK L L C Q ++ALQ +G+ C L+ L+L C + D+ + S+A GC
Sbjct: 366 AIGKSCPRLKELALLYC-QRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCR 424
Query: 146 DLRSIDLCGCIRITDDSVIALANNCPHLRSLGLYYCQNITDRAMYCLAQSKVNNRMWGNV 205
+L+ + + C I + +I++ +C L L L +C + ++A+ +
Sbjct: 425 NLKKLHIRRCYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIG------------ 472
Query: 206 KGANDEEGLRTLNISQCTALTPLAVQAVCDSFPSL 240
KG + L+ LN+S C ++ + A+ P L
Sbjct: 473 KGCS----LQQLNVSGCNQISDAGITAIARGCPQL 503
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 96/186 (51%), Gaps = 6/186 (3%)
Query: 10 PKFKKLETLILRQDKAQLEDSTVETIANCCRDLQILDLSKSFKLTDRSLYAIAHGCGDLI 69
P+ K+L L ++ + +S ++ I C+ L+IL L + D ++ +IA GC +L
Sbjct: 372 PRLKELALLYCQR----IGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLK 427
Query: 70 KLNISGCSAFSDNALAYLAIFCRRLKFLNLWGCVQAASDTALQAVGQYCNQLQSLNLGWC 129
KL+I C + + + C+ L L+L C + AL A+G+ C+ LQ LN+ C
Sbjct: 428 KLHIRRCYEIGNKGIISIGKHCKSLTELSLRFC-DKVGNKALIAIGKGCS-LQQLNVSGC 485
Query: 130 DNVCDVGVMSLAYGCPDLRSIDLCGCIRITDDSVIALANNCPHLRSLGLYYCQNITDRAM 189
+ + D G+ ++A GCP L +D+ I D + L CP L+ L L +C +ITD +
Sbjct: 486 NQISDAGITAIARGCPQLTHLDISVLQNIGDMPLAELGEGCPMLKDLVLSHCHHITDNGL 545
Query: 190 YCLAQS 195
L Q
Sbjct: 546 NHLVQK 551
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 91/165 (55%), Gaps = 3/165 (1%)
Query: 25 AQLEDSTVETIANCCRDLQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISGCSAFSDNAL 84
A++ D ++E + + C+ L++L L + + D+ L A+A GC L L + C + +D A
Sbjct: 229 AKITDLSLEAVGSHCKLLEVLYLDSEY-IHDKGLIAVAQGCHRLKNLKLQ-CVSVTDVAF 286
Query: 85 AYLAIFCRRLKFLNLWGCVQAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGVMSLAYGC 144
A + C L+ L L+ Q +D ++A+G+ +L+ L L C V G+ ++A+GC
Sbjct: 287 AAVGELCTSLERLALYS-FQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGC 345
Query: 145 PDLRSIDLCGCIRITDDSVIALANNCPHLRSLGLYYCQNITDRAM 189
+L +++ GC I + A+ +CP L+ L L YCQ I + A+
Sbjct: 346 KELERVEINGCHNIGTRGIEAIGKSCPRLKELALLYCQRIGNSAL 390
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 49 KSFKLTDRSLYAIAHGCGDLIKLNISGCSAFSDNALAYLAIFCRRLKFLNLWGCVQAASD 108
+S LTD L A+A+G + L++ C S L LA C LK L+L GC D
Sbjct: 123 ESSSLTDTGLTALANGFPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGCY--VGD 180
Query: 109 TALQAVGQYCNQLQSLNLGWCDNVCDVGVMSLAYGC-PDLRSIDLCGCIRITDDSVIALA 167
L AVG++C QL+ LNL +C+ + DVGV+ L GC L+SI + +ITD S+ A+
Sbjct: 181 QGLAAVGKFCKQLEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAVG 240
Query: 168 NNCPHLRSLGLYYCQNITDRAMYCLAQS 195
++C L L L + I D+ + +AQ
Sbjct: 241 SHCKLLEVLYLDS-EYIHDKGLIAVAQG 267
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 3/163 (1%)
Query: 26 QLEDSTVETIANCCRDLQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISGCSAFSDNALA 85
++ + + +I C+ L L L K+ +++L AI GC L +LN+SGC+ SD +
Sbjct: 436 EIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIGKGC-SLQQLNVSGCNQISDAGIT 494
Query: 86 YLAIFCRRLKFLNLWGCVQAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGVMSLAYGCP 145
+A C +L L++ +Q D L +G+ C L+ L L C ++ D G+ L C
Sbjct: 495 AIARGCPQLTHLDI-SVLQNIGDMPLAELGEGCPMLKDLVLSHCHHITDNGLNHLVQKCK 553
Query: 146 DLRSIDLCGCIRITDDSVIALANNCPHLRSLGLYYCQNITDRA 188
L + + C IT V + ++CPH++ + L +T+R
Sbjct: 554 LLETCHMVYCPGITSAGVATVVSSCPHIKKV-LIEKWKVTERT 595
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 115/258 (44%), Gaps = 50/258 (19%)
Query: 23 DKAQLEDSTVETIANCCRDLQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISGCSAFSDN 82
+ + L D+ + +AN ++ L L ++ L ++A C L L++ GC D
Sbjct: 123 ESSSLTDTGLTALANGFPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGC-YVGDQ 181
Query: 83 ALAYLAIFCRRLKFLNLW---------------GCVQA-----------ASDTALQAVGQ 116
LA + FC++L+ LNL GC ++ +D +L+AVG
Sbjct: 182 GLAAVGKFCKQLEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAVGS 241
Query: 117 YCNQLQSLNLGWCDNVCDVGVMSLAYGCPDLRSIDLCGCIRITDDSVIALANNCPHLRSL 176
+C L+ L L + + D G++++A GC L+++ L C+ +TD + A+ C L L
Sbjct: 242 HCKLLEVLYLD-SEYIHDKGLIAVAQGCHRLKNLKL-QCVSVTDVAFAAVGELCTSLERL 299
Query: 177 GLYYCQNITDRAMYCLAQSKVNNRMWGNVKGANDEEGLRTLNISQCTALTPLAVQAVCDS 236
LY Q+ TD+ M + KG+ L+ L +S C ++ ++A+
Sbjct: 300 ALYSFQHFTDKGMRAIG------------KGSKK---LKDLTLSDCYFVSCKGLEAIA-- 342
Query: 237 FPSLHTCPVRHSLIMSGC 254
H C + ++GC
Sbjct: 343 ----HGCKELERVEINGC 356
>AT3G58530.1 | Symbols: | RNI-like superfamily protein |
chr3:21645759-21648219 FORWARD LENGTH=353
Length = 353
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 115/248 (46%), Gaps = 42/248 (16%)
Query: 26 QLEDSTVETIANCCRDLQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISGCSAFSDNALA 85
++ D+ +E I + C L++ + + ++TD + + C + LN+SGC + +D ++
Sbjct: 123 KISDNGIEAITSICPKLKVFSIYWNVRVTDAGIRNLVKNCRHITDLNLSGCKSLTDKSMQ 182
Query: 86 YLAIFCRRLKFLNLWGCVQAASDTALQAVGQYCNQLQSLNL----GWCD----------- 130
+A L+ LN+ CV+ D LQ + Q C LQ+LNL G+ D
Sbjct: 183 LVAESYPDLESLNITRCVKITDDGLLQVL-QKCFSLQTLNLYALSGFTDKAYMKISLLAD 241
Query: 131 ----------NVCDVGVMSLAYGCPDLRSIDLCGCIRITDDSVIALANNCPHLRSLGLYY 180
N+ D G+ +A C L S++L C+RITD V +AN+C L L L+
Sbjct: 242 LRFLDICGAQNISDEGIGHIA-KCNKLESLNLTWCVRITDAGVNTIANSCTSLEFLSLFG 300
Query: 181 CQNITDRAMYCLAQSKVNNRMWGNVKGANDEEGLRTLNISQCTALTPLAVQAVCDSFPSL 240
+TDR + L+Q+ L TL+++ CT + + + + FP L
Sbjct: 301 IVGVTDRCLETLSQTC--------------STTLTTLDVNGCTGIKRRSREELLQMFPRL 346
Query: 241 HTCPVRHS 248
TC HS
Sbjct: 347 -TCFKVHS 353
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 107/217 (49%), Gaps = 18/217 (8%)
Query: 40 RDLQILDLSKSFKLTDRSLYAIAHGCGD----LIKLNISGCSAFSDNALAYLAIFCRRLK 95
R ++ ++L + + D L + C D L LN++ C SDN + + C +LK
Sbjct: 81 RQVKHINLEFAQGVVDSHLKLVKTECPDALLSLEWLNLNVCQKISDNGIEAITSICPKLK 140
Query: 96 FLNLWGCVQAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGVMSLAYGCPDLRSIDLCGC 155
+++ V+ +D ++ + + C + LNL C ++ D + +A PDL S+++ C
Sbjct: 141 VFSIYWNVRV-TDAGIRNLVKNCRHITDLNLSGCKSLTDKSMQLVAESYPDLESLNITRC 199
Query: 156 IRITDDSVIALANNCPHLRSLGLYYCQNITDRAMYCLAQSKVNNRMWGNVKGAND--EEG 213
++ITDD ++ + C L++L LY TD+A + S + + + ++ GA + +EG
Sbjct: 200 VKITDDGLLQVLQKCFSLQTLNLYALSGFTDKAY--MKISLLADLRFLDICGAQNISDEG 257
Query: 214 ---------LRTLNISQCTALTPLAVQAVCDSFPSLH 241
L +LN++ C +T V + +S SL
Sbjct: 258 IGHIAKCNKLESLNLTWCVRITDAGVNTIANSCTSLE 294
>AT5G01720.1 | Symbols: | RNI-like superfamily protein |
chr5:267118-270391 REVERSE LENGTH=665
Length = 665
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 96/214 (44%), Gaps = 26/214 (12%)
Query: 6 LSLVPKFKKLETL-ILRQDKAQLEDSTVETIANCCRDLQILDLSKSFKLTDRSLYAIAHG 64
L KK+ L +R D + ++ I C L+ + LSK +TD L ++
Sbjct: 294 LDFASSLKKVSALQSIRLDGCSVTPDGLKAIGTLCNSLKEVSLSKCVSVTDEGLSSLVMK 353
Query: 65 CGDLIKLNISGCSAFSDNALAYLAIFCRRLKFLNLWGCVQAASDTALQAVGQYCNQLQSL 124
DL KL+I+ C S ++ +A C L L + C S A +GQ C L+ L
Sbjct: 354 LKDLRKLDITCCRKLSRVSITQIANSCPLLVSLKMESC-SLVSREAFWLIGQKCRLLEEL 412
Query: 125 NL------------------------GWCDNVCDVGVMSLAYGCPDLRSIDLCGCIRITD 160
+L G C N+ D G+ + GC +LR +DL + ITD
Sbjct: 413 DLTDNEIDDEGLKSISSCLSLSSLKLGICLNITDKGLSYIGMGCSNLRELDLYRSVGITD 472
Query: 161 DSVIALANNCPHLRSLGLYYCQNITDRAMYCLAQ 194
+ +A C HL ++ + YCQ+ITD+++ L++
Sbjct: 473 VGISTIAQGCIHLETINISYCQDITDKSLVSLSK 506
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 91/168 (54%), Gaps = 2/168 (1%)
Query: 27 LEDSTVETIANCCRDLQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISGCSAFSDNALAY 86
++D +++++ + C+ L+ LD S LT R L ++ G G L +L++S CS+ A
Sbjct: 239 VDDDSLKSLRHDCKSLKKLDASSCQNLTHRGLTSLLSGAGYLQRLDLSHCSSVISLDFAS 298
Query: 87 LAIFCRRLKFLNLWGCVQAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGVMSLAYGCPD 146
L+ + L GC + + L+A+G CN L+ ++L C +V D G+ SL D
Sbjct: 299 SLKKVSALQSIRLDGC--SVTPDGLKAIGTLCNSLKEVSLSKCVSVTDEGLSSLVMKLKD 356
Query: 147 LRSIDLCGCIRITDDSVIALANNCPHLRSLGLYYCQNITDRAMYCLAQ 194
LR +D+ C +++ S+ +AN+CP L SL + C ++ A + + Q
Sbjct: 357 LRKLDITCCRKLSRVSITQIANSCPLLVSLKMESCSLVSREAFWLIGQ 404
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 74/142 (52%), Gaps = 3/142 (2%)
Query: 27 LEDSTVETIANCCRDLQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISGCSAFSDNALAY 86
+ D + I C +L+ LDL +S +TD + IA GC L +NIS C +D +L
Sbjct: 444 ITDKGLSYIGMGCSNLRELDLYRSVGITDVGISTIAQGCIHLETINISYCQDITDKSLVS 503
Query: 87 LAIFCRRLKFLNLWGCVQAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGVMSLAYGCPD 146
L+ C L+ GC S L A+ C +L ++L C ++ D G+++LA+ +
Sbjct: 504 LS-KCSLLQTFESRGCPNITSQ-GLAAIAVRCKRLAKVDLKKCPSINDAGLLALAHFSQN 561
Query: 147 LRSIDLCGCIRITDDSVIALAN 168
L+ I++ +T+ +++LAN
Sbjct: 562 LKQINVSD-TAVTEVGLLSLAN 582
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 3/142 (2%)
Query: 40 RDLQILDLSKSFKLTDRSLYAIAHGCGDLIK-LNISGCSAFSDNALAYLAIFCRRLKFLN 98
R+ LDL+ ++TD +L + G ++ L++S +FS L LA+ C L ++
Sbjct: 72 RNTTDLDLTFCPRVTDYALSVVGCLSGPTLRSLDLSRSGSFSAAGLLRLALKCVNLVEID 131
Query: 99 LWGCVQAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGVMSLAYGCPDLRSIDLCGCIRI 158
L + A L+ L LG C + D+G+ +A GC L ++ L C+ +
Sbjct: 132 LSNATEMRDADAAVVAEA--RSLERLKLGRCKMLTDMGIGCIAVGCKKLNTVSLKWCVGV 189
Query: 159 TDDSVIALANNCPHLRSLGLYY 180
D V LA C +R+L L Y
Sbjct: 190 GDLGVGLLAVKCKDIRTLDLSY 211
>AT2G25490.1 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1 |
chr2:10848018-10850275 REVERSE LENGTH=628
Length = 628
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 77/146 (52%), Gaps = 6/146 (4%)
Query: 52 KLTDRSLYAIAHGC---GDLIKLNISGCSA--FSDNALAYLAIFCRRLKFLNLWGCVQAA 106
K TD L AIA G G L KL+I G ++ SD L + C L L+LW V
Sbjct: 132 KATDVRLAAIAVGTAGRGGLGKLSIRGSNSAKVSDLGLRSIGRSCPSLGSLSLWN-VSTI 190
Query: 107 SDTALQAVGQYCNQLQSLNLGWCDNVCDVGVMSLAYGCPDLRSIDLCGCIRITDDSVIAL 166
+D L + + C QL+ L L C + D G++++A CP+L + L C RI D+ ++A+
Sbjct: 191 TDNGLLEIAEGCAQLEKLELNRCSTITDKGLVAIAKSCPNLTELTLEACSRIGDEGLLAI 250
Query: 167 ANNCPHLRSLGLYYCQNITDRAMYCL 192
A +C L+S+ + C + D+ + L
Sbjct: 251 ARSCSKLKSVSIKNCPLVRDQGIASL 276
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 107/236 (45%), Gaps = 18/236 (7%)
Query: 19 ILRQDKAQLEDSTVETIANCCRDLQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISGCSA 78
I + A++ D + +I C L L L +TD L IA GC L KL ++ CS
Sbjct: 156 IRGSNSAKVSDLGLRSIGRSCPSLGSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCST 215
Query: 79 FSDNALAYLAIFCRRLKFLNLWGCVQAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGVM 138
+D L +A C L L L C + D L A+ + C++L+S+++ C V D G+
Sbjct: 216 ITDKGLVAIAKSCPNLTELTLEACSRIG-DEGLLAIARSCSKLKSVSIKNCPLVRDQGIA 274
Query: 139 SLAYGCP-DLRSIDLCGCIRITDDSVIALANNCPHLRSLGLYYCQNITDRAMYCLAQ-SK 196
SL L + L + +TD S+ + +Y +ITD + L+ S+
Sbjct: 275 SLLSNTTCSLAKLKL-QMLNVTDVSLAVVG-----------HYGLSITDLVLAGLSHVSE 322
Query: 197 VNNRMWGNVKGANDEEGLRTLNISQCTALTPLAVQAVCDSFPSLHTCPVRHSLIMS 252
+ GN G + L +L I+ C +T + +++V P++ + S ++S
Sbjct: 323 KGFWVMGNGVGL---QKLNSLTITACQGVTDMGLESVGKGCPNMKKAIISKSPLLS 375
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 87/219 (39%), Gaps = 53/219 (24%)
Query: 25 AQLEDSTVETIANCCRDLQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISGCSAFSDNAL 84
+ + D+ + IA C L+ L+L++ +TD+ L AIA C +L +L + CS D L
Sbjct: 188 STITDNGLLEIAEGCAQLEKLELNRCSTITDKGLVAIAKSCPNLTELTLEACSRIGDEGL 247
Query: 85 AYLAIFCRRLKFLNLWGC-------------------------VQAASDTALQAVGQY-- 117
+A C +LK +++ C + +D +L VG Y
Sbjct: 248 LAIARSCSKLKSVSIKNCPLVRDQGIASLLSNTTCSLAKLKLQMLNVTDVSLAVVGHYGL 307
Query: 118 --------------------------CNQLQSLNLGWCDNVCDVGVMSLAYGCPDLRSID 151
+L SL + C V D+G+ S+ GCP+++
Sbjct: 308 SITDLVLAGLSHVSEKGFWVMGNGVGLQKLNSLTITACQGVTDMGLESVGKGCPNMKKAI 367
Query: 152 LCGCIRITDDSVIALANNCPHLRSLGLYYCQNITDRAMY 190
+ ++D+ +++ A L SL L C +T +
Sbjct: 368 ISKSPLLSDNGLVSFAKASLSLESLQLEECHRVTQFGFF 406
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 17/208 (8%)
Query: 27 LEDSTVETIANCCRDLQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISGCSAFSDNALAY 86
+ D +E++ C +++ +SKS L+D L + A L L + C +
Sbjct: 348 VTDMGLESVGKGCPNMKKAIISKSPLLSDNGLVSFAKASLSLESLQLEECHRVTQFGFFG 407
Query: 87 LAIFC-RRLKFLNLWGCVQAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGVMSLAYGCP 145
+ C +LK +L C+ T +C+ L+SL++ C D + ++ CP
Sbjct: 408 SLLNCGEKLKAFSLVNCLSIRDLTTGLPASSHCSALRSLSIRNCPGFGDANLAAIGKLCP 467
Query: 146 DLRSIDLCGCIRITDDSVIALANNCPHLRSLGLYYCQNITDRAMYCLAQSKVNNRMWGNV 205
L IDLCG IT+ + L + L + C N+TDR + +
Sbjct: 468 QLEDIDLCGLKGITESGFLHLIQS--SLVKINFSGCSNLTDRVISAIT------------ 513
Query: 206 KGANDEEGLRTLNISQCTALTPLAVQAV 233
A + L LNI C+ +T ++ ++
Sbjct: 514 --ARNGWTLEVLNIDGCSNITDASLVSI 539
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 10/170 (5%)
Query: 29 DSTVETIANCCRDLQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISGCSAFSDNALAYLA 88
D+ + I C L+ +DL +T+ + L+K+N SGCS +D ++ A
Sbjct: 456 DANLAAIGKLCPQLEDIDLCGLKGITESGFLHLIQS--SLVKINFSGCSNLTDRVIS--A 511
Query: 89 IFCRR---LKFLNLWGCVQAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGVMSLAYGCP 145
I R L+ LN+ GC +D +L ++ C L L++ C + D G+ +LA
Sbjct: 512 ITARNGWTLEVLNIDGCSNI-TDASLVSIAANCQILSDLDISKC-AISDSGIQALASSDK 569
Query: 146 -DLRSIDLCGCIRITDDSVIALANNCPHLRSLGLYYCQNITDRAMYCLAQ 194
L+ + + GC +TD S+ A+ L L L C++I++ + L +
Sbjct: 570 LKLQILSVAGCSMVTDKSLPAIVGLGSTLLGLNLQQCRSISNSTVDFLVE 619
>AT5G25350.1 | Symbols: EBF2 | EIN3-binding F box protein 2 |
chr5:8794842-8796882 REVERSE LENGTH=623
Length = 623
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 106/229 (46%), Gaps = 22/229 (9%)
Query: 42 LQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISGCSAFSDNALAYLAIFCRRLKFLNLWG 101
LQI K+TD L A+AHGC L +++ A SD L+ +A C ++ L+L
Sbjct: 143 LQIRGSGFESKVTDVGLGAVAHGCPSLRIVSLWNLPAVSDLGLSEIARSCPMIEKLDLSR 202
Query: 102 CVQAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGVMSLAYGCPDLRSIDLCGCIRITDD 161
C +D+ L A+ + C L L + C V + G+ ++A C +LRSI + C RI D
Sbjct: 203 C-PGITDSGLVAIAENCVNLSDLTIDSCSGVGNEGLRAIARRCVNLRSISIRSCPRIGDQ 261
Query: 162 SV-IALANNCPHLRSLGL--------------YYCQNITDRAMYCLAQSKVNNRMW--GN 204
V LA +L + L +Y +TD ++ L Q W GN
Sbjct: 262 GVAFLLAQAGSYLTKVKLQMLNVSGLSLAVIGHYGAAVTDLVLHGL-QGVNEKGFWVMGN 320
Query: 205 VKGANDEEGLRTLNISQCTALTPLAVQAVCDSFPSLHTCPVRHSLIMSG 253
KG L++L++ C +T + ++AV + P L + L++SG
Sbjct: 321 AKGLKK---LKSLSVMSCRGMTDVGLEAVGNGCPDLKHVSLNKCLLVSG 366
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 27/199 (13%)
Query: 27 LEDSTVETIANCCRDLQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISGCSAFSDNALAY 86
+ D + IA C ++ LDLS+ +TD L AIA C +L L I CS + L
Sbjct: 180 VSDLGLSEIARSCPMIEKLDLSRCPGITDSGLVAIAENCVNLSDLTIDSCSGVGNEGLRA 239
Query: 87 LAIFCRRLKFLNLWGC------------VQAA-------------SDTALQAVGQYCNQL 121
+A C L+ +++ C QA S +L +G Y +
Sbjct: 240 IARRCVNLRSISIRSCPRIGDQGVAFLLAQAGSYLTKVKLQMLNVSGLSLAVIGHYGAAV 299
Query: 122 QSLNLGWCDNVCDVG--VMSLAYGCPDLRSIDLCGCIRITDDSVIALANNCPHLRSLGLY 179
L L V + G VM A G L+S+ + C +TD + A+ N CP L+ + L
Sbjct: 300 TDLVLHGLQGVNEKGFWVMGNAKGLKKLKSLSVMSCRGMTDVGLEAVGNGCPDLKHVSLN 359
Query: 180 YCQNITDRAMYCLAQSKVN 198
C ++ + + LA+S ++
Sbjct: 360 KCLLVSGKGLVALAKSALS 378
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 69/160 (43%), Gaps = 30/160 (18%)
Query: 47 LSKSF---KLTDRSLYAIAHGC---GDLIKLNISGCSAFSDNALAYLAIFCRRLKFLNLW 100
LS+S K TD L AIA G G L KL I G S F
Sbjct: 113 LSRSLEGKKATDLRLAAIAVGTSSRGGLGKLQIRG-SGFESKV----------------- 154
Query: 101 GCVQAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGVMSLAYGCPDLRSIDLCGCIRITD 160
+D L AV C L+ ++L V D+G+ +A CP + +DL C ITD
Sbjct: 155 ------TDVGLGAVAHGCPSLRIVSLWNLPAVSDLGLSEIARSCPMIEKLDLSRCPGITD 208
Query: 161 DSVIALANNCPHLRSLGLYYCQNITDRAMYCLAQSKVNNR 200
++A+A NC +L L + C + + + +A+ VN R
Sbjct: 209 SGLVAIAENCVNLSDLTIDSCSGVGNEGLRAIARRCVNLR 248
>AT5G27920.1 | Symbols: | F-box family protein |
chr5:9942063-9944507 REVERSE LENGTH=642
Length = 642
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 6/189 (3%)
Query: 25 AQLEDSTVETIANCCRDLQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISGCSAFSDNAL 84
+ D + ++A C +L+ L+L+ +TD ++ A+A C +L L + C ++ L
Sbjct: 336 VDVTDIGMISLARNCLNLKTLNLACCGFVTDVAISAVAQSCRNLGTLKLESCHLITEKGL 395
Query: 85 AYLAIFCRRLKFLNLWGCVQAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGVMSLAYGC 144
L + ++ L+L C +D L+ + + C+ LQ L LG C N+ D G+ + C
Sbjct: 396 QSLGCYSMLVQELDLTDC-YGVNDRGLEYISK-CSNLQRLKLGLCTNISDKGIFHIGSKC 453
Query: 145 PDLRSIDLCGCIRITDDSVIALANNCPHLRSLGLYYCQNITDRAMYCLAQ----SKVNNR 200
L +DL C DD + AL+ C L L L YC +TD + + Q S + R
Sbjct: 454 SKLLELDLYRCAGFGDDGLAALSRGCKSLNRLILSYCCELTDTGVEQIRQLELLSHLELR 513
Query: 201 MWGNVKGAN 209
N+ G
Sbjct: 514 GLKNITGVG 522
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 86/183 (46%), Gaps = 26/183 (14%)
Query: 27 LEDSTVETIANCCRDLQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISGCSAFSDNALAY 86
+ D +E I+ C +LQ L L ++D+ ++ I C L++L++ C+ F D+ LA
Sbjct: 416 VNDRGLEYISKC-SNLQRLKLGLCTNISDKGIFHIGSKCSKLLELDLYRCAGFGDDGLAA 474
Query: 87 LAIFCRRLKFLNLWGC------------------------VQAASDTALQAVGQYCNQLQ 122
L+ C+ L L L C ++ + L A+ C +L
Sbjct: 475 LSRGCKSLNRLILSYCCELTDTGVEQIRQLELLSHLELRGLKNITGVGLAAIASGCKKLG 534
Query: 123 SLNLGWCDNVCDVGVMSLAYGCPDLRSIDLCGCIRITDDSVIALANNCPHLRSLGLYYCQ 182
L++ C+N+ D G +LAY +LR I+LC C ++D ++ L +N ++ + L +
Sbjct: 535 YLDVKLCENIDDSGFWALAYFSKNLRQINLCNC-SVSDTALCMLMSNLSRVQDVDLVHLS 593
Query: 183 NIT 185
+T
Sbjct: 594 RVT 596
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 26/174 (14%)
Query: 32 VETIANCCRDLQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISGCSAFSDNALAYLAIFC 91
+ET+A C L+ +D+S + DR A++ G L +L + C + SD LA + + C
Sbjct: 113 LETLARMCHALERVDVSHCWGFGDREAAALSSATG-LRELKMDKCLSLSDVGLARIVVGC 171
Query: 92 RRLKFLNLWGCVQAASDTALQAVGQYCNQLQSLNLGW----------------------- 128
L ++L C++ SD + + + C L+SL++ +
Sbjct: 172 SNLNKISLKWCMEI-SDLGIDLLCKICKGLKSLDVSYLKITNDSIRSIALLVKLEVLDMV 230
Query: 129 -CDNVCDVGVMSLAYGCPDLRSIDLCGCIRITDDSVIALANNCPHLRSLGLYYC 181
C + D G+ L G P L+ +D+ C R++ +I++ P ++ L +C
Sbjct: 231 SCPLIDDGGLQFLENGSPSLQEVDVTRCDRVSLSGLISIVRGHPDIQLLKASHC 284
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 97/250 (38%), Gaps = 65/250 (26%)
Query: 42 LQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISGCSAFSDNALAYLAIFCR--------- 92
L+ L + K L+D L I GC +L K+++ C SD + L C+
Sbjct: 148 LRELKMDKCLSLSDVGLARIVVGCSNLNKISLKWCMEISDLGIDLLCKICKGLKSLDVSY 207
Query: 93 ---------------RLKFLNLWGCVQAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGV 137
+L+ L++ C D LQ + LQ +++ CD V G+
Sbjct: 208 LKITNDSIRSIALLVKLEVLDMVSC-PLIDDGGLQFLENGSPSLQEVDVTRCDRVSLSGL 266
Query: 138 MSLAYGCPDLRSIDLCGCIRITDDSVIALANNCPHLRSL--------------------- 176
+S+ G PD++ + C+ S + HL+++
Sbjct: 267 ISIVRGHPDIQLLKASHCVSEVSGSFLKYIKGLKHLKTIWIDGAHVSDSSLVSLSSSCRS 326
Query: 177 ----GLYYCQNITDRAMYCLAQSKVNNRMWGNVKGANDEEGLRTLNISQCTALTPLAVQA 232
GL C ++TD M LA++ +N L+TLN++ C +T +A+ A
Sbjct: 327 LMEIGLSRCVDVTDIGMISLARNCLN---------------LKTLNLACCGFVTDVAISA 371
Query: 233 VCDSFPSLHT 242
V S +L T
Sbjct: 372 VAQSCRNLGT 381
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 27 LEDSTVETIANCCRDLQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISGC-SAFSDNALA 85
++D ++ + N LQ +D+++ +++ L +I G D+ L S C S S + L
Sbjct: 235 IDDGGLQFLENGSPSLQEVDVTRCDRVSLSGLISIVRGHPDIQLLKASHCVSEVSGSFLK 294
Query: 86 YLAIFCRRLKFLN-LWGCVQAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGVMSLAYGC 144
Y+ + LK L +W SD++L ++ C L + L C +V D+G++SLA C
Sbjct: 295 YI----KGLKHLKTIWIDGAHVSDSSLVSLSSSCRSLMEIGLSRCVDVTDIGMISLARNC 350
Query: 145 PDLRSIDLCGCIRITDDSVIALANNCPHLRSLGLYYCQNITDRAMYCLA--QSKVNNRMW 202
+L++++L C +TD ++ A+A +C +L +L L C IT++ + L V
Sbjct: 351 LNLKTLNLACCGFVTDVAISAVAQSCRNLGTLKLESCHLITEKGLQSLGCYSMLVQELDL 410
Query: 203 GNVKGANDEEGLRTLNISQCTALTPLAV 230
+ G ND GL IS+C+ L L +
Sbjct: 411 TDCYGVND-RGLEY--ISKCSNLQRLKL 435
>AT2G06040.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Leucine-rich
repeat, cysteine-containing subtype
(InterPro:IPR006553); BEST Arabidopsis thaliana protein
match is: RNI-like superfamily protein
(TAIR:AT5G21900.1); Has 5028 Blast hits to 2547 proteins
in 240 species: Archae - 0; Bacteria - 125; Metazoa -
2326; Fungi - 765; Plants - 1373; Viruses - 0; Other
Eukaryotes - 439 (source: NCBI BLink). |
chr2:2352333-2355419 REVERSE LENGTH=762
Length = 762
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 94/165 (56%), Gaps = 6/165 (3%)
Query: 15 LETLILRQDKAQLEDSTVETIANCCRDLQILDLSKSFKLTDRSLYAIAHGCGDLIKLNIS 74
L+ LIL + +L DS+++ I+ C +L +LDL+ KLTD SL +A+GC L KL I
Sbjct: 591 LKQLILTNSR-KLSDSSIKVISENCPNLSVLDLANVCKLTDSSLGYLANGCQALEKL-IF 648
Query: 75 GCSAFSDNAL-AYLAIFCRRLKFLNLWGCVQAASDTALQAVGQYCNQLQSLNLGWCDNVC 133
+ FSD A+ A++ LK L+L + +TAL A+ ++ ++LQ L++ WC +
Sbjct: 649 CRNPFSDEAVAAFVETAGGSLKELSLNNVKKVGHNTAL-ALAKHSDKLQILDISWCREMS 707
Query: 134 DVGVMSLAYGCPDLRSIDLCGCIRITDDSVIALANNCPHLRSLGL 178
+ + + L+ + + GC ++TD V ++ P+++ LG+
Sbjct: 708 NDLLGYIVDNSSSLKVLKVFGCSQVTD--VFVKGHSNPNVKILGV 750
>AT1G12820.1 | Symbols: AFB3 | auxin signaling F-box 3 |
chr1:4368879-4370780 REVERSE LENGTH=577
Length = 577
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 64/118 (54%), Gaps = 13/118 (11%)
Query: 65 CGDLIKLNISGCSAFSDNALAYLAIFCRRLKFLNLWGCVQAASDTALQAVGQYCNQLQSL 124
C +LI LN+S + N L L C+RL+ LW + + D L V C +LQ L
Sbjct: 283 CQNLISLNLSYAAEIQGNHLIKLIQLCKRLQ--RLW-ILDSIGDKGLAVVAATCKELQEL 339
Query: 125 NL------GWCDN---VCDVGVMSLAYGCPDLRSIDLCGCIRITDDSVIALANNCPHL 173
+ G DN V +VG+++++ GCP L SI L C ++T+ ++IA+A NCP+
Sbjct: 340 RVFPSDVHGEEDNNASVTEVGLVAISAGCPKLHSI-LYFCKQMTNAALIAVAKNCPNF 396
>AT4G07400.1 | Symbols: VFB3 | VIER F-box proteine 3 |
chr4:4197847-4199511 REVERSE LENGTH=554
Length = 554
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 23 DKAQLEDSTVETIANCCRDLQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISG--CSAFS 80
++ Q+ D + ++ C +++L L K+ T+ L +A C L KL+I G +
Sbjct: 300 ERIQMSDLGLTALSKCS-GVEVLHLVKTPDCTNVGLALVAERCKLLRKLHIDGWKTNRIG 358
Query: 81 DNALAYLAIFCRRLKFLNLWGCVQAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGVMSL 140
D L +A +C L+ L L G + +L+A+ C L+ L L D V D + +
Sbjct: 359 DEGLIVVAKYCWNLQELVLIGV--NPTKLSLEAIVSNCLNLERLALCGSDTVGDTELCCI 416
Query: 141 AYGCPDLRSIDLCGCIRITDDSVIALANNCPHLRSLGLYYCQNITDRAMYCLAQSK 196
A C LR + + C ITDD + AL N CP+L + + C+ +T + L + +
Sbjct: 417 AEKCLALRKLCIKNCP-ITDDGIKALGNGCPNLLKVKVKKCRGVTTQGADLLRKRR 471
>AT4G33210.1 | Symbols: SLOMO | F-box family protein |
chr4:16015971-16020697 REVERSE LENGTH=990
Length = 990
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 107/247 (43%), Gaps = 42/247 (17%)
Query: 39 CRDLQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISGCSAFSDNALAYLAIFCRRLKFLN 98
C LQ+LD++ KL D ++ + A C L L++S CS SD L +A C L LN
Sbjct: 368 CPLLQLLDIASCHKLLDAAIRSAAISCPQLESLDVSNCSCVSDETLREIAQACANLHILN 427
Query: 99 LWGCVQAASDTALQAVG---------QYCNQLQSLNLGWCDNVCDVGVMSL--------- 140
C + +L++V C + S ++ W N + V+ L
Sbjct: 428 ASYC----PNISLESVHLPMLTVLKLHSCEGITSASMTWIANSPALEVLELDNCNLLTTV 483
Query: 141 AYGCPDLRSIDLCGCIRITDDSVIAL------ANNCPHLRSLGLYYCQNITDRAMYCLAQ 194
+ L+SI L C + TD ++ ++ +NCP LR + IT A+ LA
Sbjct: 484 SLHLSRLQSISLVHCRKFTDLNLQSIMLSSITVSNCPALRRI------TITSNALRRLAL 537
Query: 195 SKVNNRMWGNVKGANDEEGLRTLNISQCTALTPLAVQAVCDSFPSLHTCPVRHSLIMSGC 254
K N ++ L+ +++S C +L+ +VC F CP+ SLI+ C
Sbjct: 538 QKQENLTTLVLQC----HSLQEVDLSDCESLS----NSVCKIFSDDGGCPMLKSLILDNC 589
Query: 255 LSLMSVH 261
SL +V
Sbjct: 590 ESLTAVR 596
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 83/194 (42%), Gaps = 26/194 (13%)
Query: 1 MNNLVLSLVPKFKKLETLILRQDKAQLEDSTVETIANCCRDLQILDLSKSFKLTDRSL-- 58
+N L + + LE L + K + +S + + C ++ +S ++D L
Sbjct: 269 VNALAMKAATTLRNLEVLTI--GKGHISESFFQALGEC-------NMLRSVTVSDAILGN 319
Query: 59 --YAIAHGCGDLIKLNISGCSAFSDNALAYLAIFCRRLKFLNLWGCVQAASDTALQAVGQ 116
I L +L I+ C L+I C +L+ L+L + +
Sbjct: 320 GAQEIHLSHDRLRELKITKCRVM------RLSIRCPQLRSLSL-------KRSNMSQAML 366
Query: 117 YCNQLQSLNLGWCDNVCDVGVMSLAYGCPDLRSIDLCGCIRITDDSVIALANNCPHLRSL 176
C LQ L++ C + D + S A CP L S+D+ C ++D+++ +A C +L L
Sbjct: 367 NCPLLQLLDIASCHKLLDAAIRSAAISCPQLESLDVSNCSCVSDETLREIAQACANLHIL 426
Query: 177 GLYYCQNITDRAMY 190
YC NI+ +++
Sbjct: 427 NASYCPNISLESVH 440
>AT5G21900.1 | Symbols: | RNI-like superfamily protein |
chr5:7238239-7240338 FORWARD LENGTH=544
Length = 544
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
Query: 35 IANCCRDLQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISGCSAFSDNAL-AYLAIFCRR 93
I C+ L+ LD++ KLTD+SL I GC L L ++ + FSD + A+L +
Sbjct: 383 IGRYCKKLEALDITDLDKLTDKSLEFITEGCRYLKSLKLTS-NRFSDECIAAFLEVSGGS 441
Query: 94 LKFLNLWGCVQAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGVMSLAYGCPDLRSIDLC 153
L+ L L +TA ++ + C LQ L+L WC + + + + C L+S+ L
Sbjct: 442 LRELCLNKVRDVGPETAF-SLAKVCKMLQFLDLSWCRRLKEDDLRRILRCCSSLQSLKLF 500
Query: 154 GCIRITDDSVIALANNCPHLRSLGL 178
G ++ D + L+ + H+ L L
Sbjct: 501 GWTQVEDTYLEELSRSDVHITGLKL 525
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 19/156 (12%)
Query: 52 KLTDRSLYAIAHGCGDLIKLNISGCSAFSDNALAYLAIFCRRLKFLNLWG------CVQA 105
++TD ++ I C L L+I+ +D +L ++ CR LK L L C+ A
Sbjct: 374 EVTDECMWHIGRYCKKLEALDITDLDKLTDKSLEFITEGCRYLKSLKLTSNRFSDECIAA 433
Query: 106 ASDTALQAVGQYCNQLQSLNLGWCDNVCDVG---VMSLAYGCPDLRSIDLCGCIRITDDS 162
+ + ++ + C + V DVG SLA C L+ +DL C R+ +D
Sbjct: 434 FLEVSGGSLRELC----------LNKVRDVGPETAFSLAKVCKMLQFLDLSWCRRLKEDD 483
Query: 163 VIALANNCPHLRSLGLYYCQNITDRAMYCLAQSKVN 198
+ + C L+SL L+ + D + L++S V+
Sbjct: 484 LRRILRCCSSLQSLKLFGWTQVEDTYLEELSRSDVH 519
>AT1G55590.1 | Symbols: | RNI-like superfamily protein |
chr1:20769476-20771756 REVERSE LENGTH=607
Length = 607
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 116/265 (43%), Gaps = 53/265 (20%)
Query: 26 QLEDSTVETIANCCRDLQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISG---------- 75
++ D + ++ C+ L+ + L K++D ++ H C +L K + G
Sbjct: 297 RINDMGIFLLSEACKGLESVRLGGFPKVSDAGFASLLHSCRNLKKFEVRGAFLLSDLAFH 356
Query: 76 ----------------CSAFSDNALAYLAIFCRRLKFLNLWGCVQAASDTALQAVGQYCN 119
C + A+ L + C L+ L+L C ++ SD+ L +V
Sbjct: 357 DVTGSSCSLQEVRLSTCPLITSEAVKKLGL-CGNLEVLDLGSC-KSISDSCLNSVSAL-R 413
Query: 120 QLQSLNLGWCDNVCDVGVMSLAYGCPDLRSIDLCGCIRITDDSVIALANN----CPHLRS 175
+L SLNL D V D G+++L + + L GC R++D + L NN L +
Sbjct: 414 KLTSLNLAGAD-VTDSGMLALGKSDVPITQLSLRGCRRVSDRGISYLLNNEGTISKTLST 472
Query: 176 LGLYYCQNITDRAMY-----CLAQSKVNNRMWGNVKGANDE---------EG----LRTL 217
L L + I+DRA++ C A ++++ R +V ++ E EG LR L
Sbjct: 473 LDLGHMPGISDRAIHTITHCCKALTELSIRSCFHVTDSSIESLATWERQAEGGSKQLRKL 532
Query: 218 NISQCTALTPLAVQAVCD-SFPSLH 241
N+ C +LT A++ + SF LH
Sbjct: 533 NVHNCVSLTTGALRWLSKPSFAGLH 557
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 19/164 (11%)
Query: 44 ILDLSKSFKLTDRSLYAIAHGCGDLIKLNISG---CSAFSDNALAYLAI----FCRRLKF 96
+LDL ++DR + AI L+KL++ F DN L Y + FC++L
Sbjct: 227 VLDL-----ISDRLIIAITGSLPQLVKLDLEDRPEKEPFPDNDLTYTGLQALGFCQQLTS 281
Query: 97 LNLWGC-------VQAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGVMSLAYGCPDLRS 149
L+L + +D + + + C L+S+ LG V D G SL + C +L+
Sbjct: 282 LSLVRTCYNRKISFKRINDMGIFLLSEACKGLESVRLGGFPKVSDAGFASLLHSCRNLKK 341
Query: 150 IDLCGCIRITDDSVIALANNCPHLRSLGLYYCQNITDRAMYCLA 193
++ G ++D + + + L+ + L C IT A+ L
Sbjct: 342 FEVRGAFLLSDLAFHDVTGSSCSLQEVRLSTCPLITSEAVKKLG 385
>AT2G44900.1 | Symbols: ARABIDILLO-1, ARABIDILLO1 | ARABIDILLO-1 |
chr2:18511719-18515762 REVERSE LENGTH=930
Length = 930
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 31/192 (16%)
Query: 79 FSDNALAYLAIFCRRLKFLNLWGCVQAASDTALQA------VGQYCNQ------------ 120
F + A LA C L +L G A S L+A G YC +
Sbjct: 97 FDASMAASLASRCVNLHYLRFRGVESADSLIHLKARNLIEVSGDYCKKITDATLSMIVAR 156
Query: 121 ---LQSLNLG--WCDNVCDVGVMSLAYGCPDLRSIDLCGCIRITDDSVIALANNCPHLRS 175
L+SL LG +C+ + + ++A+ CP L+ + L G +T +++ ALA +CP L
Sbjct: 157 HEALESLQLGPDFCERITSDAIKAVAFCCPKLKKLRLSGIRDVTSEAIEALAKHCPQLND 216
Query: 176 LGLYYCQNITDRAM------YCLAQSKVNNRMWGNVKGANDE-EGLRTLNISQCTALTPL 228
LG C NI + A+ L+ + +N W D+ L L++S+ T + P
Sbjct: 217 LGFLDCLNIDEEALGKVVSVRYLSVAGTSNIKWSIASNNWDKLPKLTGLDVSR-TDIGPT 275
Query: 229 AVQAVCDSFPSL 240
AV S SL
Sbjct: 276 AVSRFLTSSQSL 287
>AT5G57900.1 | Symbols: SKIP1 | SKP1 interacting partner 1 |
chr5:23449916-23450915 REVERSE LENGTH=300
Length = 300
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 29 DSTVETIANCCRDLQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISGCSAFSDNALAYLA 88
D + A+ C +LQ+L + S +TD S+ IA C L +L+IS C S + L +
Sbjct: 101 DHALSYAADRCPNLQVLAIRSSPNVTDASMTKIAFRCRSLKELDISYCHEISHDTLVMIG 160
Query: 89 IFCRRLKFL--NL--WGCVQAAS-------------DTALQAVGQYCNQLQSLNLGWCDN 131
C L+ L NL W S DT A+G++ L+ L + +
Sbjct: 161 RNCPNLRILKRNLMDWSSRHIGSVPTEYLDACPQDGDTEADAIGKHMINLEHLEIQFS-R 219
Query: 132 VCDVGVMSLAYGCPDLRSIDLCGCIRITDDSVIALANNCPHLRSL 176
+ G+ S+ GCP L +DL GC+ ++ + + + L+ +
Sbjct: 220 LSVKGLASICEGCPKLEYLDLFGCVHLSSRDITSNVSRLKWLKEV 264
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 57/143 (39%), Gaps = 17/143 (11%)
Query: 37 NCCRD---LQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISGCSAFSDNALAYLAIFCRR 93
CRD I DL F S + + + L + +S+ L +
Sbjct: 41 TVCRDPYLWSIFDLEPWFDSYPESTHLWSPEFEQKVDLMLRSVVDWSEGGLTKIR----- 95
Query: 94 LKFLNLWGCVQAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGVMSLAYGCPDLRSIDLC 153
V+ SD AL C LQ L + NV D + +A+ C L+ +D+
Sbjct: 96 ---------VRHCSDHALSYAADRCPNLQVLAIRSSPNVTDASMTKIAFRCRSLKELDIS 146
Query: 154 GCIRITDDSVIALANNCPHLRSL 176
C I+ D+++ + NCP+LR L
Sbjct: 147 YCHEISHDTLVMIGRNCPNLRIL 169
>AT1G47056.1 | Symbols: VFB1 | VIER F-box proteine 1 |
chr1:17276103-17277659 REVERSE LENGTH=518
Length = 518
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 77/172 (44%), Gaps = 30/172 (17%)
Query: 23 DKAQLEDSTVETIANCCRDLQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISGCSAFSDN 82
++ Q+ D + I+ C L+ L L K+ + T+ L AIA C L KL+I G A
Sbjct: 267 ERMQVSDVALSAISYC-SSLESLHLVKTPECTNFGLAAIAEKCKRLRKLHIDGWKA---- 321
Query: 83 ALAYLAIFCRRLKFLNLWGCVQAASDTALQAVGQYCNQLQSLNL-GWCDNVCDVGVMSLA 141
NL G D L AV ++C+QLQ L L G +G+ LA
Sbjct: 322 ---------------NLIG------DEGLVAVAKFCSQLQELVLIGVNPTTLSLGM--LA 358
Query: 142 YGCPDLRSIDLCGCIRITDDSVIALANNCPHLRSLGLYYCQNITDRAMYCLA 193
C +L + LCGC D + +A CP LR L + C I+D + LA
Sbjct: 359 AKCLNLERLALCGCDTFGDPELSCIAAKCPALRKLCIKNCP-ISDVGIENLA 409
>AT3G60350.1 | Symbols: ARABIDILLO-2, ARABIDILLO2 | ARABIDILLO-2 |
chr3:22306806-22310596 REVERSE LENGTH=928
Length = 928
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 7/132 (5%)
Query: 60 AIAHGCGDLIKLNISGCSAFSDNALAYLAIFCRRLKFLNLWGCVQAASDTALQAVGQYCN 119
++A C DL K+ G D+A A + + R L ++ C + +D L +
Sbjct: 97 SLATRCVDLQKIRFRGV----DSADAIIHLKARSLLEISGDYC-RKITDATLSMIAARHE 151
Query: 120 QLQSLNLG--WCDNVCDVGVMSLAYGCPDLRSIDLCGCIRITDDSVIALANNCPHLRSLG 177
L+SL LG +C+ + + +A+ CP L+ + + G ++ +++ +LA +CP L LG
Sbjct: 152 ALESLQLGPDFCERITSDAIRVIAFCCPKLKKLRVSGMRDVSSEAIESLAKHCPQLSDLG 211
Query: 178 LYYCQNITDRAM 189
C NI + A+
Sbjct: 212 FLDCLNINEEAL 223
>AT3G07550.2 | Symbols: | RNI-like superfamily protein |
chr3:2409946-2411133 FORWARD LENGTH=395
Length = 395
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Query: 42 LQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISGCSAFSDNALAYLAIFCRRLKFLNLWG 101
L+ L LS L D SL ++ + L L + C SD+ ++ +A FC L ++L+
Sbjct: 93 LEHLSLSGCTVLNDSSLDSLRYPGARLHTLYLDCCFGISDDGISTIASFCPNLSVVSLYR 152
Query: 102 CVQAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGVMSLAYGCPDLRSIDLCGCIRIT 159
C SD L+ + + L+ +NL +C V D G+ +L+ C L S+ + C IT
Sbjct: 153 C--NISDIGLETLARASLSLKCVNLSYCPLVSDFGIKALSQACLQLESVKISNCKSIT 208
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 58 LYAIAHGCGDLIK-LNISGCSAFSDNALAYLAIFCRRLKFLNLWGCVQAASDTALQAVGQ 116
L I G ++ LN+ C D ++ +A C L+ NL C + +AVG+
Sbjct: 260 LVPIGSGIASKLRILNLRMCRTVGDESIEAIAKGCPLLQEWNLALC-HEVKISGWEAVGK 318
Query: 117 YCNQLQSLNLGWCDNVCDVGVMSLAYGCPDLRSIDLCGCIRITDDSV 163
+C L+ L++ C N+CD G+++L GC +L+ + + G R+T ++
Sbjct: 319 WCRNLKKLHVNRCRNLCDQGLLALRCGCMNLQILYMNGNARLTPTAI 365
>AT3G07550.1 | Symbols: | RNI-like superfamily protein |
chr3:2409946-2411133 FORWARD LENGTH=395
Length = 395
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Query: 42 LQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISGCSAFSDNALAYLAIFCRRLKFLNLWG 101
L+ L LS L D SL ++ + L L + C SD+ ++ +A FC L ++L+
Sbjct: 93 LEHLSLSGCTVLNDSSLDSLRYPGARLHTLYLDCCFGISDDGISTIASFCPNLSVVSLYR 152
Query: 102 CVQAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGVMSLAYGCPDLRSIDLCGCIRIT 159
C SD L+ + + L+ +NL +C V D G+ +L+ C L S+ + C IT
Sbjct: 153 C--NISDIGLETLARASLSLKCVNLSYCPLVSDFGIKALSQACLQLESVKISNCKSIT 208
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 58 LYAIAHGCGDLIK-LNISGCSAFSDNALAYLAIFCRRLKFLNLWGCVQAASDTALQAVGQ 116
L I G ++ LN+ C D ++ +A C L+ NL C + +AVG+
Sbjct: 260 LVPIGSGIASKLRILNLRMCRTVGDESIEAIAKGCPLLQEWNLALC-HEVKISGWEAVGK 318
Query: 117 YCNQLQSLNLGWCDNVCDVGVMSLAYGCPDLRSIDLCGCIRITDDSV 163
+C L+ L++ C N+CD G+++L GC +L+ + + G R+T ++
Sbjct: 319 WCRNLKKLHVNRCRNLCDQGLLALRCGCMNLQILYMNGNARLTPTAI 365
>AT5G07670.1 | Symbols: | RNI-like superfamily protein |
chr5:2430421-2432065 FORWARD LENGTH=476
Length = 476
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 35 IANCCRDLQILDLSKSFKLTDRSLYAI-AHGCGDLIKL--NISGC--SAFSDNALAYLAI 89
+A C LQ L+L K +D L I A +++L N+ G S SD L LA
Sbjct: 203 VAEECSRLQELELHKC---SDSVLLGIGAFENLQILRLVGNVDGLYNSLVSDIGLMILAQ 259
Query: 90 FCRRLKFLNLWGCVQAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGVMSLAYGCPDLRS 149
C+RL L L GC + D ++ +G+ C L+ L + CDN + G + C +L++
Sbjct: 260 GCKRLVKLELVGC-EGGFD-GIKEIGECCQMLEELTV--CDNKMESGWLGGLRYCENLKT 315
Query: 150 IDLCGCIRITDDSVIALANNCPHLRSLGLYYCQ 182
+ L C +I +D +L+ CP L L L CQ
Sbjct: 316 LKLVSCKKIDNDPDESLSCCCPALERLQLEKCQ 348
>AT5G49980.1 | Symbols: AFB5 | auxin F-box protein 5 |
chr5:20334420-20336531 REVERSE LENGTH=619
Length = 619
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 29/194 (14%)
Query: 47 LSKSFKLTDRSLYAIAHGCGDLIKLNISGCSAFSDNALAYLAIFCRRLKFLNLWGCVQAA 106
LS +L L AI C +L LN S + S + + + C +L+ W + +
Sbjct: 317 LSGFRELMPEYLPAIFPVCANLTSLNFSYAN-ISPDMFKPIILNCHKLQVF--WA-LDSI 372
Query: 107 SDTALQAVGQYCNQLQSLNLGWCDN-------VCDVGVMSLAYGCPDLRSIDLCGCIRIT 159
D LQAV C +L+ L + D V ++G+ +++ GC L SI L C R+T
Sbjct: 373 CDEGLQAVAATCKELRELRIFPFDPREDSEGPVSELGLQAISEGCRKLESI-LYFCQRMT 431
Query: 160 DDSVIALANNCPHLRSLGLYYCQNITDRAMYCLAQSKVNNRMWGNVKGANDEEGLRTLNI 219
+ +VIA++ NCP L L C+ + +V G +EG + +
Sbjct: 432 NAAVIAMSENCPELTVFRL------------CI----MGRHRPDHVTGKPMDEGFGAI-V 474
Query: 220 SQCTALTPLAVQAV 233
C LT LAV +
Sbjct: 475 KNCKKLTRLAVSGL 488
>AT4G30640.1 | Symbols: | RNI-like superfamily protein |
chr4:14952670-14953682 FORWARD LENGTH=301
Length = 301
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 20/141 (14%)
Query: 29 DSTVETIANCCRDLQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISGCSAFSDN------ 82
D+++E IA C +L+ LD+S S+ +T SL + C +L L + +
Sbjct: 139 DASMEKIAMNCPNLRELDISYSYGITHESLITLGRSCQNLKILKRNLLPRLGPSLPTIVA 198
Query: 83 ALAYLAIFCRRLKFLNLWGCVQAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGVMSLAY 142
L YLA F R +G ++A + +G+Y QL+ L + + + G+ S+
Sbjct: 199 PLDYLATFPR-------YGNIEA------RIIGKYMTQLKHLEIRYS-TLTARGLDSVCK 244
Query: 143 GCPDLRSIDLCGCIRITDDSV 163
GC +L +DL GCI +T +
Sbjct: 245 GCSNLEYMDLRGCISLTRSDI 265
>AT3G26810.1 | Symbols: AFB2 | auxin signaling F-box 2 |
chr3:9868342-9870464 FORWARD LENGTH=575
Length = 575
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 11/116 (9%)
Query: 65 CGDLIKLNISGCSAFSDNALAYLAIFCRRLKFLNLWGCVQAASDTALQAVGQYCNQLQSL 124
C +L LN+S + + L L C++L+ LW + + D L+ V C +LQ L
Sbjct: 283 CHNLTSLNLSYAAEIHGSHLIKLIQHCKKLQ--RLW-ILDSIGDKGLEVVASTCKELQEL 339
Query: 125 NL-------GWCDNVCDVGVMSLAYGCPDLRSIDLCGCIRITDDSVIALANNCPHL 173
+ G V + G+++++ GCP L SI L C ++T+ +++ +A NCP+
Sbjct: 340 RVFPSDLLGGGNTAVTEEGLVAISAGCPKLHSI-LYFCQQMTNAALVTVAKNCPNF 394
>AT5G51370.1 | Symbols: | RNI-like superfamily protein |
chr5:20872783-20873850 FORWARD LENGTH=355
Length = 355
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 15/155 (9%)
Query: 34 TIANCCRDLQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISGC------SAFSDNALAYL 87
++A C DLQ L+L K D L+ IA C +L L + G S+ SD L +L
Sbjct: 168 SLAGDCSDLQELEL---HKCNDNLLHGIA-ACKNLKGLRLVGSVDGLYSSSVSDIGLTFL 223
Query: 88 AIFCRRLKFLNLWGCVQAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGVMSLAYGCPDL 147
A CR L L L GC S ++A+GQ C L+ L++ CD+ D G ++ L
Sbjct: 224 AQGCRSLVKLELSGC--EGSFDGIKAIGQCCEVLEELSI--CDHRMDDGWIAALSYFESL 279
Query: 148 RSIDLCGCIRI-TDDSVIALANNCPHLRSLGLYYC 181
+ + + C +I L +CP + SL L C
Sbjct: 280 KILRISSCRKIDASPGPEKLLRSCPAMESLQLKRC 314
>AT1G80630.1 | Symbols: | RNI-like superfamily protein |
chr1:30308879-30310615 REVERSE LENGTH=578
Length = 578
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 25/142 (17%)
Query: 68 LIKLNISGCSAFSDNALAYLAIFCRRLKFLNLWGC---------------------VQAA 106
L+ LN+ G + SD + L +F RRL FLNL C +
Sbjct: 295 LVHLNLKGANFLSDEMVMKLGMFFRRLTFLNLSFCSKLTGLAFFSIIERCVSLRCMIMVG 354
Query: 107 SDTALQAVGQYCNQLQS----LNLGWCDNVCDVGVMSLAYGCPDLRSIDLCGCIRITDDS 162
++ ++ + +S L L N+ D + ++ CP + S+D+ C IT D
Sbjct: 355 TNFGVEEYTKDTKDFKSGVKFLYLSRNHNLLDECLEKISRHCPFIESLDVAQCPGITRDG 414
Query: 163 VIALANNCPHLRSLGLYYCQNI 184
++ + NC LRSL + C I
Sbjct: 415 ILEVWRNCGKLRSLDISRCTGI 436
>AT2G17020.1 | Symbols: | F-box/RNI-like superfamily protein |
chr2:7396559-7398787 REVERSE LENGTH=656
Length = 656
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 83/173 (47%), Gaps = 7/173 (4%)
Query: 26 QLEDSTVETIANCCRDLQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISGCSAFSDNALA 85
++ D+ +TI + C L + KLTD + I L +++ C +D+A+
Sbjct: 338 RVTDAGFKTILHSCASLSKFSIYHGPKLTDLVFHDILATTLSLSHVSLRRCHLLTDHAIQ 397
Query: 86 YLAIFCRRLKFLNLWGCVQAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGVMSLAYGCP 145
LA +L+ L+L GC + D L AV + +L+ L L D + D G+ L G
Sbjct: 398 KLA-SSLKLENLDLRGC-RNLRDETLTAV-SHLPKLKVLLLDGAD-ISDTGLSYLKEGVL 453
Query: 146 D-LRSIDLCGCIRITDDSVIALANNCPH--LRSLGLYYCQNITDRAMYCLAQS 195
D L S+ + GC +TD + L + LR L L N+TD A++ LA+S
Sbjct: 454 DSLVSLSVRGCRNLTDKFMSTLFDGSSKLALRELDLSNLPNLTDAAIFALAKS 506
>AT3G50080.1 | Symbols: VFB2 | VIER F-box proteine 2 |
chr3:18572788-18574356 FORWARD LENGTH=522
Length = 522
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 6/181 (3%)
Query: 20 LRQDKAQLEDSTVETIANCCRDLQILDLSKSFKLTDRSLYAIAHGCGDLIKLNISG--CS 77
+R ++ Q+ D + I+ C +L+ L + K+ ++ L ++ C L KL+I G
Sbjct: 262 IRLERLQVTDIGLFGISKCS-NLETLHIVKTPDCSNLGLASVVERCKLLRKLHIDGWRVK 320
Query: 78 AFSDNALAYLAIFCRRLKFLNLWGCVQAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGV 137
D L +A C L+ L L G A+ +L A+ C +L+ L L + D +
Sbjct: 321 RIGDQGLMSVAKHCLNLQELVLIGV--DATYMSLSAIASNCKKLERLALCGSGTIGDAEI 378
Query: 138 MSLAYGCPDLRSIDLCGCIRITDDSVIALANNCPHLRSLGLYYCQNITDRAMYCLAQSKV 197
+A C LR + GC+ I+D V ALA CP L L + C +T L + ++
Sbjct: 379 GCIAEKCVTLRKFCIKGCL-ISDVGVQALALGCPKLVKLKVKKCSLVTGEVREWLRERRM 437
Query: 198 N 198
Sbjct: 438 T 438
>AT3G62980.1 | Symbols: TIR1 | F-box/RNI-like superfamily protein |
chr3:23273479-23276181 REVERSE LENGTH=594
Length = 594
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 26/149 (17%)
Query: 69 IKLNISGC------SAFSDNALAYL-AIF--CRRLKFLNL-WGCVQAASDTALQAVGQYC 118
+ + +SGC S F D AYL A++ C RL LNL + VQ+ L C
Sbjct: 257 LSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLC---QC 313
Query: 119 NQLQSLNLGWC-DNVCDVGVMSLAYGCPDLRSIDLCGC--------IRITDDSVIALANN 169
+LQ L W D + D G+ LA C DLR + + + +T+ +++++
Sbjct: 314 PKLQRL---WVLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMG 370
Query: 170 CPHLRSLGLYYCQNITDRAMYCLAQSKVN 198
CP L S+ LY+C+ +T+ A+ +A+++ N
Sbjct: 371 CPKLESV-LYFCRQMTNAALITIARNRPN 398
>AT4G05497.1 | Symbols: | RNI-like superfamily protein |
chr4:2777903-2778801 REVERSE LENGTH=246
Length = 246
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 9/154 (5%)
Query: 38 CCR--DLQ---ILDLSKSFKLTDRSLYAIAHGCGDLIKLNISGCSAFSDNALAYLAIFCR 92
CCR DL +L+++ + + L IA +L +L + C+ + A+
Sbjct: 87 CCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPVLSRGVVEAAMKLP 146
Query: 93 RLKFLNLWGCVQAASDTALQAVGQYCNQLQSLNLGWCDNV--CDVGVMSLAYGCPDLRSI 150
L+ L++ + + L+ VGQ C L++L L +V CD +++A P LR +
Sbjct: 147 LLEELDI-TYKSSIREQELKVVGQSCPNLRTLKLNCTGDVKCCDKVALAIAETMPGLRHL 205
Query: 151 DLCGCIRITDDSVIALANNCPHLRSLGLYYCQNI 184
L +++ + A+ CPHL++LGL+ C NI
Sbjct: 206 QLFRN-GLSETGLNAILEGCPHLKNLGLHQCLNI 238
>AT1G80570.1 | Symbols: | RNI-like superfamily protein |
chr1:30290828-30292231 FORWARD LENGTH=467
Length = 467
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 23/145 (15%)
Query: 49 KSFKLTDRSLYAIAHGCGDLIKLNISGCSAFSDNALAYLAIFCRRLKFLNLWGCV----- 103
+ F L + Y++ GCG SD L+ CRR L+ +
Sbjct: 31 RFFSLDNEQRYSLRIGCG---------LVPASDALLS----LCRRFPNLSKVEIIYSGWM 77
Query: 104 ----QAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGVMSLAYGCPDLRSIDLCGCIRIT 159
+ D L + C+ L L L +C + DVG+ L+ CP+L S+ L RIT
Sbjct: 78 SKLGKQVDDQGLLVLTTNCHSLTDLTLSFCTFITDVGIGHLS-SCPELSSLKLNFAPRIT 136
Query: 160 DDSVIALANNCPHLRSLGLYYCQNI 184
V++LA C LR L L C N+
Sbjct: 137 GCGVLSLAVGCKKLRRLHLIRCLNV 161
>AT1G80570.3 | Symbols: | RNI-like superfamily protein |
chr1:30290828-30292231 FORWARD LENGTH=467
Length = 467
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 23/145 (15%)
Query: 49 KSFKLTDRSLYAIAHGCGDLIKLNISGCSAFSDNALAYLAIFCRRLKFLNLWGCV----- 103
+ F L + Y++ GCG SD L+ CRR L+ +
Sbjct: 31 RFFSLDNEQRYSLRIGCG---------LVPASDALLS----LCRRFPNLSKVEIIYSGWM 77
Query: 104 ----QAASDTALQAVGQYCNQLQSLNLGWCDNVCDVGVMSLAYGCPDLRSIDLCGCIRIT 159
+ D L + C+ L L L +C + DVG+ L+ CP+L S+ L RIT
Sbjct: 78 SKLGKQVDDQGLLVLTTNCHSLTDLTLSFCTFITDVGIGHLS-SCPELSSLKLNFAPRIT 136
Query: 160 DDSVIALANNCPHLRSLGLYYCQNI 184
V++LA C LR L L C N+
Sbjct: 137 GCGVLSLAVGCKKLRRLHLIRCLNV 161