Miyakogusa Predicted Gene

Lj0g3v0151999.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0151999.1 tr|C1MWA8|C1MWA8_MICPC Predicted protein
OS=Micromonas pusilla (strain CCMP1545)
GN=MICPUCDRAFT_1862,36.47,3e-17,seg,NULL; DnaJ,Heat shock protein
DnaJ, N-terminal; zf-CSL,Zinc finger, DPH-type; DnaJ molecular
cha,CUFF.9369.1
         (187 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G10130.1 | Symbols:  | DNAJ heat shock N-terminal domain-cont...   164   4e-41
AT1G56300.1 | Symbols:  | Chaperone DnaJ-domain superfamily prot...    52   3e-07

>AT4G10130.1 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr4:6320959-6321483 REVERSE
           LENGTH=174
          Length = 174

 Score =  164 bits (414), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 85/180 (47%), Positives = 116/180 (64%), Gaps = 11/180 (6%)

Query: 6   MLLYKDNIHETHYEVLNVKEDADYEEIRASYRTAILSFHPDKLLKSPETSSSNDLPTGER 65
           ML+ ++ +HET+YE+L+VKEDA YEEIR SYR+AIL  HPDKL  +  +SS +     E+
Sbjct: 1   MLVGENCVHETYYEILSVKEDASYEEIRNSYRSAILHSHPDKLNNTSRSSSDD-----EK 55

Query: 66  FLKVQKAWEILXXXXXXXXYDNELQSLRHXXXXXXXXXXXXXXNLQDMMAEDGGGALELF 125
           FLK+QKAWE+L        YDN+L+S RH              +++DM  E  G  ++LF
Sbjct: 56  FLKIQKAWEVLSDAELRVVYDNDLRSSRHDGITADEI------SIEDMSVEITGDVIDLF 109

Query: 126 HQCRCGDYFSVDSLELRKMGYSLSSEGNRISVVNPDSSSGSVILPCGSCSLKARLVLSMD 185
           +QCRCGDYF VDS EL  MG++L  +G+ + V    +   SV+LPCGSCSLK R+ +  D
Sbjct: 110 YQCRCGDYFCVDSSELGTMGFALLRDGDFVYVKRLGAFVASVVLPCGSCSLKTRVWVDSD 169


>AT1G56300.1 | Symbols:  | Chaperone DnaJ-domain superfamily
          protein | chr1:21079022-21080168 REVERSE LENGTH=156
          Length = 156

 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 4/75 (5%)

Query: 12 NIHETHYEVLNVKEDADYEEIRASYRTAILSFHPDKLLKSPETSSSNDLPTGERFLKVQK 71
          N+  ++Y +L +++DA   +IR +YR   + +HPD+  ++P  +         RF ++Q+
Sbjct: 9  NVRSSYYTILGIRKDASVSDIRTAYRKLAMKWHPDRYARNPGVAGE----AKRRFQQIQE 64

Query: 72 AWEILXXXXXXXXYD 86
          A+ +L        YD
Sbjct: 65 AYSVLNDENKRSMYD 79