Miyakogusa Predicted Gene

Lj0g3v0151899.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0151899.1 Non Chatacterized Hit- tr|I1KMJ2|I1KMJ2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2557
PE=,49.43,0.0000000001, ,CUFF.9357.1
         (122 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G12170.2 | Symbols: CLT3 | CRT (chloroquine-resistance transp...    62   1e-10
AT5G19380.2 | Symbols: CLT1 | CRT (chloroquine-resistance transp...    56   6e-09
AT5G19380.1 | Symbols: CLT1 | CRT (chloroquine-resistance transp...    55   9e-09
AT4G24460.2 | Symbols: CLT2 | CRT (chloroquine-resistance transp...    52   8e-08
AT4G24460.1 | Symbols: CLT2 | CRT (chloroquine-resistance transp...    52   8e-08

>AT5G12170.2 | Symbols: CLT3 | CRT (chloroquine-resistance
           transporter)-like transporter 3 | chr5:3931649-3934961
           FORWARD LENGTH=452
          Length = 452

 Score = 61.6 bits (148), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/35 (80%), Positives = 29/35 (82%)

Query: 62  AAVTVVMGVGNRVMYKLALVPLKQYPFFLAQTGTL 96
           AAVT   GVGNRVMYKLALVPLK+YPFFLAQ  T 
Sbjct: 111 AAVTAAFGVGNRVMYKLALVPLKEYPFFLAQLSTF 145


>AT5G19380.2 | Symbols: CLT1 | CRT (chloroquine-resistance
           transporter)-like transporter 1 | chr5:6527017-6530445
           REVERSE LENGTH=507
          Length = 507

 Score = 55.8 bits (133), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 23/29 (79%), Positives = 26/29 (89%)

Query: 68  MGVGNRVMYKLALVPLKQYPFFLAQTGTL 96
           +GVGNRV+YKLAL+PLKQYPFFLAQ  T 
Sbjct: 115 LGVGNRVLYKLALIPLKQYPFFLAQLSTF 143


>AT5G19380.1 | Symbols: CLT1 | CRT (chloroquine-resistance
           transporter)-like transporter 1 | chr5:6527017-6530445
           REVERSE LENGTH=447
          Length = 447

 Score = 55.5 bits (132), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 23/29 (79%), Positives = 26/29 (89%)

Query: 68  MGVGNRVMYKLALVPLKQYPFFLAQTGTL 96
           +GVGNRV+YKLAL+PLKQYPFFLAQ  T 
Sbjct: 115 LGVGNRVLYKLALIPLKQYPFFLAQLSTF 143


>AT4G24460.2 | Symbols: CLT2 | CRT (chloroquine-resistance
           transporter)-like transporter 2 | chr4:12642888-12645310
           FORWARD LENGTH=431
          Length = 431

 Score = 52.4 bits (124), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 6/60 (10%)

Query: 43  RPRLG------ELETGNGRESLNQTAAVTVVMGVGNRVMYKLALVPLKQYPFFLAQTGTL 96
           RPR        E    + R  +   + V V + V NRV+YKLALVP+KQYPFF+AQ  T 
Sbjct: 73  RPRFSVGASTEESSIPSNRNLIVANSVVIVALAVANRVLYKLALVPMKQYPFFMAQLTTF 132


>AT4G24460.1 | Symbols: CLT2 | CRT (chloroquine-resistance
           transporter)-like transporter 2 | chr4:12642888-12645310
           FORWARD LENGTH=431
          Length = 431

 Score = 52.4 bits (124), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 6/60 (10%)

Query: 43  RPRLG------ELETGNGRESLNQTAAVTVVMGVGNRVMYKLALVPLKQYPFFLAQTGTL 96
           RPR        E    + R  +   + V V + V NRV+YKLALVP+KQYPFF+AQ  T 
Sbjct: 73  RPRFSVGASTEESSIPSNRNLIVANSVVIVALAVANRVLYKLALVPMKQYPFFMAQLTTF 132