Miyakogusa Predicted Gene

Lj0g3v0151739.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0151739.1 Non Chatacterized Hit- tr|I1KXG4|I1KXG4_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,90.2,0,23S RRNA
METHYLTRANSFERASE,NULL; seg,NULL; no description,NULL,CUFF.9345.1
         (204 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G60230.1 | Symbols:  | Radical SAM superfamily protein | chr1...   301   2e-82
AT3G19630.1 | Symbols:  | Radical SAM superfamily protein | chr3...    96   2e-20
AT2G39670.1 | Symbols:  | Radical SAM superfamily protein | chr2...    87   9e-18
AT2G39670.2 | Symbols:  | Radical SAM superfamily protein | chr2...    87   1e-17

>AT1G60230.1 | Symbols:  | Radical SAM superfamily protein |
           chr1:22212223-22214346 REVERSE LENGTH=458
          Length = 458

 Score =  301 bits (771), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 141/203 (69%), Positives = 164/203 (80%)

Query: 1   MGEPLHNIDNVIKAANIMVDGQGLQFSPRKVTVSTSGLVPQLRRFLHESNCALAVSLNAT 60
           MGEP HNIDNVIKAANIMVD  GL FSPRKVTVSTSGLVPQL+RFL ESNCALAVSLNAT
Sbjct: 255 MGEPFHNIDNVIKAANIMVDENGLHFSPRKVTVSTSGLVPQLKRFLRESNCALAVSLNAT 314

Query: 61  TNEVRNWIMPINRKYKXXXXXXXXXXXXXXKNNYKVLFEYVMLEGINDSNEDAERLIKLV 120
           T+EVRNWIMPINRKYK              ++ YKVLFEYVML G+NDS +DA RL++LV
Sbjct: 315 TDEVRNWIMPINRKYKLSLLLETLREGLSSRHKYKVLFEYVMLAGVNDSMDDARRLVELV 374

Query: 121 KGIPCKINLISFNPHNGSFFRPTKDERMIEFRNTLAAAGVVVFLRLSRGDDQMAACGQLG 180
           +GIPCKINLI FNPH+GS F  T++++MI+FRN LA  G  V +R SRG+DQMAACGQLG
Sbjct: 375 QGIPCKINLIQFNPHSGSQFIQTEEDKMIKFRNVLAEGGCTVLMRFSRGNDQMAACGQLG 434

Query: 181 KPGTIQAPLLRVPEQFQIAVGSS 203
             G +QAP++RVPEQF+ A+ +S
Sbjct: 435 MIGAVQAPVMRVPEQFRTALKAS 457


>AT3G19630.1 | Symbols:  | Radical SAM superfamily protein |
           chr3:6818676-6820674 REVERSE LENGTH=372
          Length = 372

 Score = 95.5 bits (236), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 101/198 (51%), Gaps = 15/198 (7%)

Query: 1   MGEPLHNIDNVIKAANIMVDGQGLQFSPRKVTVSTSGLVPQLRRFLHES--NCALAVSLN 58
           MGEPL+N + V++A  +M++ Q  Q SP+++T+ST G+V  + + LH      +LAVSL+
Sbjct: 169 MGEPLNNYNAVVEAVRVMLN-QPFQLSPKRITISTVGIVHAINK-LHNDLPGVSLAVSLH 226

Query: 59  ATTNEVRNWIMPINRKYKXXXXXXXXXXXXXXKNNYKVLFEYVMLEGINDSNEDAERLIK 118
           A   E+R  IMP  R +                +  K+  EY+ML+G+ND  + A  L +
Sbjct: 227 APVQEIRCQIMPAARAFPLQKLMDALQTFQK-NSQQKIFIEYIMLDGVNDQEQHAHLLGE 285

Query: 119 LVKGIPCKINLISFNP-HNGSFFRPTKDERMIEFRNTL-AAAGVVVFLRLSRGDDQMAAC 176
           L+K     INLI FNP  + S F  +  + +  F+  L     +   +R   G D   AC
Sbjct: 286 LLKTFQVVINLIPFNPIGSTSQFETSSIQGVSRFQKILRETYKIRTTIRKEMGQDISGAC 345

Query: 177 GQL--------GKPGTIQ 186
           GQL          PGT++
Sbjct: 346 GQLVVNQPDIKKTPGTVE 363


>AT2G39670.1 | Symbols:  | Radical SAM superfamily protein |
           chr2:16534303-16536986 FORWARD LENGTH=428
          Length = 428

 Score = 86.7 bits (213), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 93/182 (51%), Gaps = 6/182 (3%)

Query: 1   MGEPLHNIDNVIKAANIMVDGQGLQFSPRKVTVSTSGLVPQLRRFL-HESNCALAVSLNA 59
           MGEP+ N+ +V+ A   +   + ++   R +T+ST G+   +++   H+    LAVSL+A
Sbjct: 223 MGEPMLNLKSVLDAHRCL--NKDIEIGQRMITISTVGVPNTIKKLASHKLQSTLAVSLHA 280

Query: 60  TTNEVRNWIMPINRKYKXXXXXXXXXXXXXXKNNYKVLFEYVMLEGINDSNEDAERLIKL 119
               +R  I+P  + Y               + N +V FEY +L G+ND  E A  L +L
Sbjct: 281 PNQSLREKIVPSAKAYPLEAIMKDCRDYFQ-ETNRRVSFEYALLAGVNDQVEHAVELAEL 339

Query: 120 VK--GIPCKINLISFNPHNGSFFRPTKDERMIEFRNTLAAAGVVVFLRLSRGDDQMAACG 177
           ++  G    +NLI +NP  GS ++    + ++ F   L +  +   +R +RG D  AACG
Sbjct: 340 LREWGKTYHVNLIPYNPIEGSEYQRPYKKAVLAFAAALESRKITASVRQTRGLDASAACG 399

Query: 178 QL 179
           QL
Sbjct: 400 QL 401


>AT2G39670.2 | Symbols:  | Radical SAM superfamily protein |
           chr2:16534303-16536986 FORWARD LENGTH=431
          Length = 431

 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 93/182 (51%), Gaps = 6/182 (3%)

Query: 1   MGEPLHNIDNVIKAANIMVDGQGLQFSPRKVTVSTSGLVPQLRRFL-HESNCALAVSLNA 59
           MGEP+ N+ +V+ A   +   + ++   R +T+ST G+   +++   H+    LAVSL+A
Sbjct: 226 MGEPMLNLKSVLDAHRCL--NKDIEIGQRMITISTVGVPNTIKKLASHKLQSTLAVSLHA 283

Query: 60  TTNEVRNWIMPINRKYKXXXXXXXXXXXXXXKNNYKVLFEYVMLEGINDSNEDAERLIKL 119
               +R  I+P  + Y               + N +V FEY +L G+ND  E A  L +L
Sbjct: 284 PNQSLREKIVPSAKAYPLEAIMKDCRDYFQ-ETNRRVSFEYALLAGVNDQVEHAVELAEL 342

Query: 120 VK--GIPCKINLISFNPHNGSFFRPTKDERMIEFRNTLAAAGVVVFLRLSRGDDQMAACG 177
           ++  G    +NLI +NP  GS ++    + ++ F   L +  +   +R +RG D  AACG
Sbjct: 343 LREWGKTYHVNLIPYNPIEGSEYQRPYKKAVLAFAAALESRKITASVRQTRGLDASAACG 402

Query: 178 QL 179
           QL
Sbjct: 403 QL 404