Miyakogusa Predicted Gene

Lj0g3v0151539.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0151539.1 Non Chatacterized Hit- tr|I3SQX7|I3SQX7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,100,7e-19,seg,NULL,CUFF.9330.1
         (157 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G43150.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...    55   1e-08

>AT5G43150.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: mitochondrion;
           EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
           growth stages; Has 1807 Blast hits to 1807 proteins in
           277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
           Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes
           - 339 (source: NCBI BLink). | chr5:17325076-17325689
           FORWARD LENGTH=91
          Length = 91

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 2/55 (3%)

Query: 68  WQNMVFPVRRVWLTLSSRLKSSKNGAGLLKLQDDVQTCEYSDVQVMWEILQRTES 122
           W  M FP RR+W   + R+      +GLL+L+ DV +CEY D+ +MW +L + E 
Sbjct: 10  WNTMAFPTRRIWNRFTVRVGFRH--SGLLRLEHDVSSCEYEDIHIMWNLLHKNED 62