Miyakogusa Predicted Gene

Lj0g3v0150869.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0150869.1 Non Chatacterized Hit- tr|I1JCQ0|I1JCQ0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13721
PE,82.61,0,FAD/NAD(P)-binding domain,NULL; Thi4,NULL; no
description,NULL; PHYTOENE DEHYDROGENASE,NULL,CUFF.9266.1
         (217 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G49555.1 | Symbols:  | FAD/NAD(P)-binding oxidoreductase fami...   333   7e-92

>AT5G49555.1 | Symbols:  | FAD/NAD(P)-binding oxidoreductase family
           protein | chr5:20107411-20110602 REVERSE LENGTH=556
          Length = 556

 Score =  333 bits (853), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 163/229 (71%), Positives = 187/229 (81%), Gaps = 16/229 (6%)

Query: 1   MWRRTFTSATALKDKKWDALIIGGGHNGLTAAAYLARGGLSVAV------------TEEL 48
           MWRR+F++   L  KKWDA++IGGGHNGLTAAAYLARGGLSVAV            TEE+
Sbjct: 1   MWRRSFST---LPKKKWDAVVIGGGHNGLTAAAYLARGGLSVAVLERRHVIGGAAVTEEI 57

Query: 49  VPGFKFSRCSYLQSLLRPSVMNELELGSKHGLKLLRSNPLSFTPCLDGRYLLLGTDKHLN 108
           VPGFKFSRCSYLQ LLRP ++ ELELG +HGLKLL+ +P SFTPCLDGRYLLLG D+ LN
Sbjct: 58  VPGFKFSRCSYLQGLLRPCIIRELELG-RHGLKLLKRSPSSFTPCLDGRYLLLGPDQDLN 116

Query: 109 HSEISKFSQKDAEAYPRYESKLESFCKFMDLVLDSPPPESLQHKSSLNEQLKNKIQNSVF 168
           HSEISKFS+ DA+AYPRYE +LE FC FMD +LDS PPESLQ  SS N++L NK+  S F
Sbjct: 117 HSEISKFSKHDADAYPRYEKQLERFCGFMDPLLDSTPPESLQSASSFNDKLSNKMYKSAF 176

Query: 169 WARCLRQASSLGQKDMVDFLDLLLSPVSKVLNNWFEADVLKATLASDAV 217
           WARCLRQA SLG KDMV F+DLLL+P SKVLNNWFE+DVLKA+LA+DAV
Sbjct: 177 WARCLRQAVSLGHKDMVAFMDLLLAPASKVLNNWFESDVLKASLATDAV 225