Miyakogusa Predicted Gene

Lj0g3v0150729.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0150729.1 Non Chatacterized Hit- tr|F6I0Z6|F6I0Z6_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,62.86,7e-17,
,gene.g11481.t1.1
         (92 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH) DNA-b...    83   4e-17

>AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH)
           DNA-binding superfamily protein | chr2:7331721-7334077
           FORWARD LENGTH=571
          Length = 571

 Score = 82.8 bits (203), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 39/64 (60%), Positives = 51/64 (79%)

Query: 1   MEALNTLGMDVVHATVTSHKGLVSNVFKVEKKDSEMVEAEDVRDSLLELTRNRTRGWSHE 60
           MEAL++LG++V +A  T +  LVSNVFKVEK D+EMV+AE VR+SLLE+TRN +RGW  +
Sbjct: 457 MEALDSLGLEVTNANTTRYLSLVSNVFKVEKNDNEMVQAEHVRNSLLEITRNTSRGWQDD 516

Query: 61  MTAT 64
             AT
Sbjct: 517 QMAT 520