Miyakogusa Predicted Gene

Lj0g3v0150579.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0150579.1 Non Chatacterized Hit- tr|I1MP75|I1MP75_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,95.57,0,coiled-coil,NULL; DNA REPAIR HELICASE RAD3/XP-D,NULL; DNA
REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY M,CUFF.9249.1
         (745 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G03190.2 | Symbols: ATXPD, UVH6 | RAD3-like DNA-binding helic...  1363   0.0  
AT1G03190.1 | Symbols: ATXPD, UVH6 | RAD3-like DNA-binding helic...  1363   0.0  
AT1G20720.1 | Symbols:  | RAD3-like DNA-binding helicase protein...   169   6e-42
AT1G79890.1 | Symbols:  | RAD3-like DNA-binding helicase protein...   124   3e-28
AT1G79950.1 | Symbols:  | RAD3-like DNA-binding helicase protein...   109   6e-24
AT1G20750.1 | Symbols:  | RAD3-like DNA-binding helicase protein...    89   1e-17

>AT1G03190.2 | Symbols: ATXPD, UVH6 | RAD3-like DNA-binding helicase
           protein | chr1:775822-779863 FORWARD LENGTH=758
          Length = 758

 Score = 1363 bits (3528), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 641/745 (86%), Positives = 692/745 (92%)

Query: 1   MKFQIEDVTIYFPYDNIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
           M F+IEDVT+YFPYDNIYPEQY YMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSY 
Sbjct: 1   MIFKIEDVTVYFPYDNIYPEQYEYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYR 60

Query: 61  LSKPQSPLKLLYCTRTVHEMEKTLAELRLLHDYQTRFLGPAATILALGLSSRKNLCVNSR 120
           LS+P SP+KL+YCTRTVHEMEKTL EL+LLHDYQ R LG  A ILALGLSSRKNLCVN++
Sbjct: 61  LSRPDSPIKLVYCTRTVHEMEKTLGELKLLHDYQVRHLGTQAKILALGLSSRKNLCVNTK 120

Query: 121 VLAAENRDSVDAGCRKLTASWVRAVAAENPAVPSCEFFEQYERAGSGAVLPPGVYTLQDL 180
           VLAAENRDSVDA CRK TASWVRA++ ENP V  C+FFE YE+A   A+LPPGVYTL+DL
Sbjct: 121 VLAAENRDSVDAACRKRTASWVRALSTENPNVELCDFFENYEKAAENALLPPGVYTLEDL 180

Query: 181 RAFGKEKGWCPYYLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKECVVVFDEAHNID 240
           RAFGK +GWCPY+LARHM+QFANV+VYSYQYLLDPKVAG ISKE+QKE VVVFDEAHNID
Sbjct: 181 RAFGKNRGWCPYFLARHMIQFANVIVYSYQYLLDPKVAGFISKELQKESVVVFDEAHNID 240

Query: 241 NVCIEALSVSVRRQTIEGARRNLTRMRQEIDKFKATDAGRLRAEYNRLVEGLALRGDLPA 300
           NVCIEALSVSVRR T+EGA RNL ++RQEID+FKATDAGRLRAEYNRLVEGLALRGDL  
Sbjct: 241 NVCIEALSVSVRRVTLEGANRNLNKIRQEIDRFKATDAGRLRAEYNRLVEGLALRGDLSG 300

Query: 301 TDGWLANPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYFEGRMETENVEKESPVGFVTS 360
            D WLANPALP DILKEAVPGNIRRAEHF+HVLRRL+QY   R++TENVEKESPV FV+S
Sbjct: 301 GDQWLANPALPHDILKEAVPGNIRRAEHFVHVLRRLLQYLGVRLDTENVEKESPVSFVSS 360

Query: 361 ILNHAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQSICDFATLVGTYARGFSIIIEP 420
           + + AGI+QKTLKFCYDRL SLM+TLEITDTDEFL IQ++CDFATLVGTYARGFSIIIEP
Sbjct: 361 LNSQAGIEQKTLKFCYDRLQSLMLTLEITDTDEFLPIQTVCDFATLVGTYARGFSIIIEP 420

Query: 421 FDERMPHIPDPVLQLCCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRS 480
           +DERMPHIPDP+LQL CHDASLAIKPVF+RFQSVVITSGTLSPIDLYPRLLNF PVVSRS
Sbjct: 421 YDERMPHIPDPILQLSCHDASLAIKPVFDRFQSVVITSGTLSPIDLYPRLLNFTPVVSRS 480

Query: 481 FTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDLGVVRNYGRLLLEMASVVPDGIVCFFV 540
           F MS+TRDCICPMVLTRGSDQLPVSTKFDMRSD GVVRNYG+LL+EM S+VPDG+VCFFV
Sbjct: 481 FKMSMTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVVRNYGKLLVEMVSIVPDGVVCFFV 540

Query: 541 SYSYLDGIVNSWNENGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAIFFSVA 600
           SYSY+DGI+ +WNE GILKEIMQ KLVFIETQDVVETTLALDNYR+ACDCGRGA+FFSVA
Sbjct: 541 SYSYMDGIIATWNETGILKEIMQQKLVFIETQDVVETTLALDNYRRACDCGRGAVFFSVA 600

Query: 601 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLECLRDTFQIKEGDFLTFDALRQA 660
           RGKVAEGIDFDRHYGRLV+M+GVPFQYTLSKIL ARLE L DTFQIKEGDFLTFDALRQA
Sbjct: 601 RGKVAEGIDFDRHYGRLVVMYGVPFQYTLSKILRARLEYLHDTFQIKEGDFLTFDALRQA 660

Query: 661 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 720
           AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMA+HIAREF
Sbjct: 661 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMAIHIAREF 720

Query: 721 LRKMAQPYDKTGGTGRKTLLSQEDL 745
           LRKMAQPYDK G  GRKTLL+QEDL
Sbjct: 721 LRKMAQPYDKAGTMGRKTLLTQEDL 745


>AT1G03190.1 | Symbols: ATXPD, UVH6 | RAD3-like DNA-binding helicase
           protein | chr1:775822-779863 FORWARD LENGTH=758
          Length = 758

 Score = 1363 bits (3528), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 641/745 (86%), Positives = 692/745 (92%)

Query: 1   MKFQIEDVTIYFPYDNIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60
           M F+IEDVT+YFPYDNIYPEQY YMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSY 
Sbjct: 1   MIFKIEDVTVYFPYDNIYPEQYEYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYR 60

Query: 61  LSKPQSPLKLLYCTRTVHEMEKTLAELRLLHDYQTRFLGPAATILALGLSSRKNLCVNSR 120
           LS+P SP+KL+YCTRTVHEMEKTL EL+LLHDYQ R LG  A ILALGLSSRKNLCVN++
Sbjct: 61  LSRPDSPIKLVYCTRTVHEMEKTLGELKLLHDYQVRHLGTQAKILALGLSSRKNLCVNTK 120

Query: 121 VLAAENRDSVDAGCRKLTASWVRAVAAENPAVPSCEFFEQYERAGSGAVLPPGVYTLQDL 180
           VLAAENRDSVDA CRK TASWVRA++ ENP V  C+FFE YE+A   A+LPPGVYTL+DL
Sbjct: 121 VLAAENRDSVDAACRKRTASWVRALSTENPNVELCDFFENYEKAAENALLPPGVYTLEDL 180

Query: 181 RAFGKEKGWCPYYLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKECVVVFDEAHNID 240
           RAFGK +GWCPY+LARHM+QFANV+VYSYQYLLDPKVAG ISKE+QKE VVVFDEAHNID
Sbjct: 181 RAFGKNRGWCPYFLARHMIQFANVIVYSYQYLLDPKVAGFISKELQKESVVVFDEAHNID 240

Query: 241 NVCIEALSVSVRRQTIEGARRNLTRMRQEIDKFKATDAGRLRAEYNRLVEGLALRGDLPA 300
           NVCIEALSVSVRR T+EGA RNL ++RQEID+FKATDAGRLRAEYNRLVEGLALRGDL  
Sbjct: 241 NVCIEALSVSVRRVTLEGANRNLNKIRQEIDRFKATDAGRLRAEYNRLVEGLALRGDLSG 300

Query: 301 TDGWLANPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYFEGRMETENVEKESPVGFVTS 360
            D WLANPALP DILKEAVPGNIRRAEHF+HVLRRL+QY   R++TENVEKESPV FV+S
Sbjct: 301 GDQWLANPALPHDILKEAVPGNIRRAEHFVHVLRRLLQYLGVRLDTENVEKESPVSFVSS 360

Query: 361 ILNHAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQSICDFATLVGTYARGFSIIIEP 420
           + + AGI+QKTLKFCYDRL SLM+TLEITDTDEFL IQ++CDFATLVGTYARGFSIIIEP
Sbjct: 361 LNSQAGIEQKTLKFCYDRLQSLMLTLEITDTDEFLPIQTVCDFATLVGTYARGFSIIIEP 420

Query: 421 FDERMPHIPDPVLQLCCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRS 480
           +DERMPHIPDP+LQL CHDASLAIKPVF+RFQSVVITSGTLSPIDLYPRLLNF PVVSRS
Sbjct: 421 YDERMPHIPDPILQLSCHDASLAIKPVFDRFQSVVITSGTLSPIDLYPRLLNFTPVVSRS 480

Query: 481 FTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDLGVVRNYGRLLLEMASVVPDGIVCFFV 540
           F MS+TRDCICPMVLTRGSDQLPVSTKFDMRSD GVVRNYG+LL+EM S+VPDG+VCFFV
Sbjct: 481 FKMSMTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVVRNYGKLLVEMVSIVPDGVVCFFV 540

Query: 541 SYSYLDGIVNSWNENGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAIFFSVA 600
           SYSY+DGI+ +WNE GILKEIMQ KLVFIETQDVVETTLALDNYR+ACDCGRGA+FFSVA
Sbjct: 541 SYSYMDGIIATWNETGILKEIMQQKLVFIETQDVVETTLALDNYRRACDCGRGAVFFSVA 600

Query: 601 RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLECLRDTFQIKEGDFLTFDALRQA 660
           RGKVAEGIDFDRHYGRLV+M+GVPFQYTLSKIL ARLE L DTFQIKEGDFLTFDALRQA
Sbjct: 601 RGKVAEGIDFDRHYGRLVVMYGVPFQYTLSKILRARLEYLHDTFQIKEGDFLTFDALRQA 660

Query: 661 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 720
           AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMA+HIAREF
Sbjct: 661 AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMAIHIAREF 720

Query: 721 LRKMAQPYDKTGGTGRKTLLSQEDL 745
           LRKMAQPYDK G  GRKTLL+QEDL
Sbjct: 721 LRKMAQPYDKAGTMGRKTLLTQEDL 745


>AT1G20720.1 | Symbols:  | RAD3-like DNA-binding helicase protein |
           chr1:7185658-7192794 REVERSE LENGTH=1175
          Length = 1175

 Score =  169 bits (428), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 206/846 (24%), Positives = 333/846 (39%), Gaps = 178/846 (21%)

Query: 3   FQIEDVTIYFPYDNIYPEQYSYMVELKRALDA---KGHC--LLEMPTGTGKTIALLSLIT 57
           +QI  + + FPY   Y  Q ++M  +   LD     GHC  LLE PTGTGK+++LL  + 
Sbjct: 27  YQIGGLQVEFPY-QPYGTQLAFMSRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSVL 85

Query: 58  ---------------SYVLSKPQS---PLK------------------------------ 69
                          S+  + P++   PL                               
Sbjct: 86  AWQQNYKSRLLKGNLSHSKAAPEAATDPLNHGGGFIPETQPSDTPASTNVEKAETATKKR 145

Query: 70  -----LLYCTRTVHEMEKTLAELRLLHDYQTRFLGPAATILALGLSSRKNLCVNSRVLAA 124
                + Y +RT  ++ + + E R     +T +  P A      L+SRK+ C N  VL  
Sbjct: 146 TKIPTIYYASRTHSQITQVIREYR-----KTGYRVPMAV-----LASRKHYCTNRHVLG- 194

Query: 125 ENRDSVDAGCRKLTASWVRAVAAENPAVPSCEFFEQYERAGSGAVLPP----GVYTLQDL 180
             +D+VD  CR L          ++ A   C  F+   +  S   L P     V+ ++DL
Sbjct: 195 --KDNVDDECRLLL---------KDKANIQCSEFKNVNKITSHPSLQPRGHNEVHDIEDL 243

Query: 181 RAFGKEKGWCPYYLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKECVVVFDEAHNID 240
              GK    CPY+ +  M + A +V   Y Y+++P +   +  ++ K  +++FDEAHN++
Sbjct: 244 VKVGKNVRGCPYFASWSMAENAQLVFCPYSYIVNPVIRAGVEVDL-KGAIIIFDEAHNME 302

Query: 241 NVCIEALSVSVRRQTIEGARRNLTRM---RQEIDKFKATDAGRLRAEYNRLVEGLALRGD 297
           ++  EA S+++   T+   +  L +M   +  I +        L +   R  + LA R  
Sbjct: 303 DIAREAGSINLEEDTLFKLQNELEQMSVAQPMIYQPLCEVVEGLISWIGRKKDSLAKRDF 362

Query: 298 LPATDGWLANPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYFEGRMETENVEKESPVGF 357
                 W       D  L+E    NI R E F  +L    +      E E          
Sbjct: 363 QHYFSSWTG-----DKALRELEESNITR-ECFPILLECFTKAIRTSKEAE---------M 407

Query: 358 VTSILNHAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQSICDFATLVGTYARGFSII 417
            + +L  +GI   TL+  +  L            D  L +Q         GT+   FS  
Sbjct: 408 ESDMLYLSGISVLTLEELFSSLTYFFSRNGSHILDYQLGLQRSTKRGDPSGTWTHTFS-- 465

Query: 418 IEPFDERMPHIPDPVLQLCCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVV 477
                            L C + ++  K + +   SV++TSGTLSP++      +F+  +
Sbjct: 466 -----------------LWCMNPAVVFKDLADISLSVILTSGTLSPMN------SFSSEL 502

Query: 478 SRSFTMSL-TRDCICPMV------LTRGSDQLPVSTKFDMRSDLGVVRNYGRLLLEMASV 530
              F  SL     I P +      ++ G    P++  +            G+ L E+ ++
Sbjct: 503 GMQFGTSLEAPHVIDPNMQVWAGAISNGPSNYPLNASYKTADAYSFQDALGKSLEEICTI 562

Query: 531 VPDGIVCFFVSYSYLDGIVNSWNENGILKEIMQHKLVFIE----TQDVVETTLA------ 580
           VP G + FF SY  ++ +   W E      +   K +F+E     QD  ++ L       
Sbjct: 563 VPGGSLVFFPSYKLMEKLCMRWRETEQWSRLCLKKDLFVEPRGGAQDEFDSVLKGYYDSI 622

Query: 581 ------LDNYRKACDCG-----------RGAIFFSVARGKVAEGIDFDRHYGRLVIMFGV 623
                 +   R+A   G           +GA F +V RGKV+EGIDF     R VI+ G+
Sbjct: 623 RGKNKIIGRNRRAKKAGPIKTETQDDSKKGAAFLAVCRGKVSEGIDFADDNARAVIIVGI 682

Query: 624 PFQYTLSKILLARLECLRDTFQIKE-----GDFLTFDALRQAAQCVGRVIRSKADYGMMI 678
           PF   L  I +   +   DT++  +      ++    A R   Q  GR IR + DYG +I
Sbjct: 683 PFP-NLHDIQVGLKKKYNDTYKSSKSLLGGSEWYCQQAYRALNQAAGRCIRHRFDYGAII 741

Query: 679 FADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKTGGTGRKT 738
           F D+RY     R+ +  W+   ++  + N    M     R F   + +  D       K 
Sbjct: 742 FLDERYKEQRNRASISKWLRQSIK-VYDNFEASM--EGLRSFFNSVKEQVDS------KM 792

Query: 739 LLSQED 744
           L SQED
Sbjct: 793 LGSQED 798


>AT1G79890.1 | Symbols:  | RAD3-like DNA-binding helicase protein |
           chr1:30048655-30052203 FORWARD LENGTH=882
          Length = 882

 Score =  124 bits (311), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 142/303 (46%), Gaps = 53/303 (17%)

Query: 447 VFERFQSVVITSGTLSPID-----LYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSDQ 501
           V +   +V++  GTL PI+     L+P L + N +   S +  +  + I P+ ++ G   
Sbjct: 553 VVDEAHAVILAGGTLQPIEETRERLFPWLPS-NQLQFFSCSHIVPPESIMPIAVSHG--- 608

Query: 502 LPVSTKFDM----RSDLGVVRNYGRLLLEMASVVPDGIVCFFVSYSYLDGIVNSWNENGI 557
            P    FD     RS +G+++  G L+  + +VVP+GI+ FF S+ Y   +  +W+ +GI
Sbjct: 609 -PSGQSFDFSHSSRSSIGMIQELGLLMSNLVAVVPEGIIVFFSSFEYETQVHTAWSNSGI 667

Query: 558 LKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAIFFSVARGKVAEGIDFDRHYGRL 617
           L+ I++ K VF E +   E    L +Y++A +  RGAI  +V  GKV+EGI+F     R 
Sbjct: 668 LRRIVKKKRVFREPRKNTEVEAVLRDYKEAIESERGAIMLAVVGGKVSEGINFSDSMCRC 727

Query: 618 VIMFGVPFQYTLSKILLARLECLR---DTFQIKEGDFLTFDA------------------ 656
           V+M G+P+       LL R++ +    D+  IK    L  D+                  
Sbjct: 728 VVMVGLPYPSPSDIELLERIKHIEGRADSDSIKPSVTLVDDSYYSGDVQAGFGVLKSCKR 787

Query: 657 ----------LRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKR--------SKLPGWIL 698
                     ++   Q +GR IR + DY  ++  D RYS    +        +KLP WI 
Sbjct: 788 RGKEYYENLCMKAVNQSIGRAIRHEKDYASILLVDARYSNDPSKRTSHSHPSNKLPKWIK 847

Query: 699 SHL 701
             L
Sbjct: 848 DRL 850



 Score = 69.3 bits (168), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 82/188 (43%), Gaps = 22/188 (11%)

Query: 65  QSPLKLLYCTRTVHEMEKTLAELRLLHDYQTRFLGPAATILALGLSSRKNLCVNSRVLAA 124
           Q   K+ +C+RT  ++ + + ELR     +T F   A  +  + L SRKNLC+N  VL  
Sbjct: 180 QGGFKVFFCSRTHSQLSQFVKELR-----KTVF---AKKLKVVCLGSRKNLCINEDVLKL 231

Query: 125 ENRDSVDAGCRKLTASWVRAVAAEN-----------PAVPSCEFFEQY--ERAGSGAVLP 171
            N   ++  C  L    +  V+ +             A   C    ++  +R        
Sbjct: 232 GNVTRINERCLDLQKKKISQVSKKKNLGANVRIVRTKASCRCPMLRKHKLQREFKAESFQ 291

Query: 172 PGVYTLQDLRAFGKEKGWCPYYLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKECVV 231
                ++DL   G+E   CPYY +R M   A++V+  YQ LL       +   + K  VV
Sbjct: 292 QEAMDIEDLVQLGREMRTCPYYGSRRMAPAADLVILPYQSLLSKSSRESLGLSL-KNSVV 350

Query: 232 VFDEAHNI 239
           + DEAHN+
Sbjct: 351 IIDEAHNL 358


>AT1G79950.1 | Symbols:  | RAD3-like DNA-binding helicase protein |
           chr1:30073580-30079537 FORWARD LENGTH=1040
          Length = 1040

 Score =  109 bits (273), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 131/269 (48%), Gaps = 19/269 (7%)

Query: 453 SVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSDQLPVSTKFDMRS 512
           S+++TSGTLSP+D   + L  +  +       ++ + +   V++ G     +++ +  R 
Sbjct: 484 SIILTSGTLSPMDSLAQELKLDFPIRLENPHVISSNQLWAGVVSTGPSGYVLNSSYRNRD 543

Query: 513 DLGVVRNYGRLLLEMASVVPDGIVCFFVSYSYLDGIVNSW------NENGILKEIMQHKL 566
                +  G  ++  + VVP+G++ FF SY  +D  +  W      N   + + I + K 
Sbjct: 544 VPEYKQELGNAIVNFSRVVPEGLLIFFPSYYLMDSCITFWKNGCYRNSMTVWERICKLKK 603

Query: 567 VFIETQDVVETTLALDNYRKACD--CGRGAIFFSVARGKVAEGIDFDRHYGRLVIMFGVP 624
             IE +D      A+ ++ +        G +FF+V RGKV+EG+DF    GR V++ G+P
Sbjct: 604 PVIEPKDSSLFPAAMRDFSEKLQDRATSGVVFFAVCRGKVSEGLDFADGAGRAVVITGLP 663

Query: 625 FQYTLSKILLARLECLRDTFQIKE-----------GDFLTFDALRQAAQCVGRVIRSKAD 673
           +       +  + E L +  Q+ +             + + +A R   Q +GRVIR + D
Sbjct: 664 YARVTDPRVKLKREFLDEQSQLADVKLPRSTLLSGSMWYSQEAARAVNQAIGRVIRHRHD 723

Query: 674 YGMMIFADKRYSRHDKRSKLPGWILSHLR 702
           YG +IF D R+ +  ++SK+  WI  +++
Sbjct: 724 YGAIIFCDDRFEQPSQQSKISLWIRPNVK 752



 Score = 80.5 bits (197), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 118/276 (42%), Gaps = 51/276 (18%)

Query: 3   FQIEDVTIYFPYDNIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSY--- 59
           + I  + + FP++  Y  Q  YM  +  +L  K H LLE PTGTGKT+ LL    ++   
Sbjct: 49  YSIRGINVEFPFE-AYQSQIIYMDRVIESLQNKCHALLESPTGTGKTLCLLCATLAWRKS 107

Query: 60  ---------------VLSKPQSPLK------------LLYCTRTVHEMEKTLAELRLLHD 92
                            S    PL             ++Y +RT  ++ + + EL+    
Sbjct: 108 LGSFSTRKDRKNSAIPWSDSDEPLSQSGGGGGGAFPTIVYASRTHSQLRQVIKELKR-SS 166

Query: 93  YQTRFLGPAATILALGLSSRKNLCVNSRVLAAENRDSVDAGCRKLTASWVRAVAAENPAV 152
           Y+ + +          L SR+ LCVN  V +   +   +A C+ L     +        +
Sbjct: 167 YRPKMVV---------LGSREQLCVNEEVNSLRGKALTNA-CQYLCKKRGKRQCNHFNRL 216

Query: 153 PSCEFFEQYERAGSGAVLPPGVYTLQDLRAFGKEKGWCPYYLARHMVQFANVVVYSYQYL 212
           P  ++ +     G   V       ++DL   GK+ G CPYY+ R + +  +++   Y YL
Sbjct: 217 P--DYLKHNPHIGDEPV------DIEDLVNIGKDSGPCPYYITRELHKDVDIIFAPYNYL 268

Query: 213 LDPKVAGIISKEMQKECVVVFDEAHNIDNVCIEALS 248
           +       + K      V++FDEAHN++++C ++ S
Sbjct: 269 ISNGYRKFL-KVNWTNSVLIFDEAHNLESLCADSAS 303


>AT1G20750.1 | Symbols:  | RAD3-like DNA-binding helicase protein |
           chr1:7203302-7208998 REVERSE LENGTH=1144
          Length = 1144

 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 145/353 (41%), Gaps = 46/353 (13%)

Query: 371 TLKFCYDRLHSLMMTLEITDTDEFLHIQSICD----FATLV------GTYARGFSIIIEP 420
            LK C+++  +     EI     +L   S+      FATL       G++   + + ++ 
Sbjct: 328 NLKACFNQAITKSEAAEIDPDKPYLSGISVSTLEELFATLTYFFSRNGSHVLDYEMGLQR 387

Query: 421 FDERMPHIPDPVLQLCCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLL--NFNPVVS 478
             +R  +       L C + S+  K + +   S+++TSGTLSP++ +   L   F   + 
Sbjct: 388 SAKRGDNGWTNTFSLWCMNPSVVFKDLADLSLSIILTSGTLSPMNSFSSELGMQFGTCLE 447

Query: 479 RSFTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDLGVVRNYGRLLLEMASVVPDGIVCF 538
               +          + T   +  P++  +            G+ L E+ ++VP G + F
Sbjct: 448 APHVIDPNMQVWAGAISTVPGN-YPLNASYRTAEAYAFQDALGKSLEEICTIVPGGSLVF 506

Query: 539 FVSYSYLDGIVNSWNENGILKEIMQHKLVFIE----TQDVVETTLAL------------- 581
           F SY  ++ +   W+E G    +     +FIE    ++D  ET L               
Sbjct: 507 FPSYKLMEKLCTRWHETGQWSRLCLKTDLFIEPRGGSKDDFETVLKEYYDSISGKNRLIG 566

Query: 582 --DNYRKAC--------DCGRGAIFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSK 631
              + +KA         D  RG+ F +V RGKV+EG+DF     R VI+ G+P    L  
Sbjct: 567 RNSSVKKAGSVITEAQDDSKRGSAFLAVCRGKVSEGMDFSDDNARAVIIVGIPLP-NLGD 625

Query: 632 ILLARLECLRDTFQIKEG-----DFLTFDALRQAAQCVGRVIRSKADYGMMIF 679
           IL+       DT +  +      ++    A R   Q  GR IR + DYG +IF
Sbjct: 626 ILVELKRKYNDTNKSSKNLLGGSEWYCQQAYRALNQAAGRCIRHRFDYGAIIF 678



 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 85/217 (39%), Gaps = 54/217 (24%)

Query: 3   FQIEDVTIYFPYDNIYPEQYSYMVELKRALD-----AKGHCLLEMPTGTGKTIALLSLIT 57
           +QI  + + FPY   Y  Q ++M  +   LD        H LLE PTGTGK+++LL  + 
Sbjct: 27  YQIGGLQVEFPY-QPYGTQLAFMSRVISTLDRAQRDGHSHALLESPTGTGKSLSLLCSVL 85

Query: 58  SYVLS-----------------------------KPQSPLKLLYCTRTVHEMEKTLAELR 88
           ++  S                             +PQ P  + Y +RT  ++ + + E R
Sbjct: 86  AWQKSYKSRFPNGNLSHSKTQPSDIAGSSNVEPHEPQIPT-IYYASRTHAQITQVIREYR 144

Query: 89  LLHDYQTRFLGPAATILALGLSSRKNLCVNSRVLAAENRDSVDAGCRKLTASWVRAVAAE 148
                +T +  P        L SRK  C NS V   EN   VD  CR L         AE
Sbjct: 145 -----KTGYRVPMTV-----LGSRKRYCTNSHVQGKEN---VDEKCRLLLKDKKNIKCAE 191

Query: 149 NPAVPSCEFFEQYERAGSGAVLPPGVYTLQDLRAFGK 185
              V     +   ++ G       GV+ ++DL   GK
Sbjct: 192 FNGVGRILAYPSLQQTGHN-----GVHDIEDLVKIGK 223