Miyakogusa Predicted Gene

Lj0g3v0150329.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0150329.1 tr|G7I3N6|G7I3N6_MEDTR Origin recognition complex
subunit OS=Medicago truncatula GN=MTR_1g019770 PE=,83.38,0,SUBFAMILY
NOT NAMED,NULL; ORIGIN RECOGNITION COMPLEX SUBUNIT 2,Origin
recognition complex, subunit 2,CUFF.9221.1
         (368 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G37560.1 | Symbols: ORC2, ATORC2 | origin recognition complex...   489   e-138
AT2G37560.2 | Symbols: ORC2, ATORC2 | origin recognition complex...   479   e-135

>AT2G37560.1 | Symbols: ORC2, ATORC2 | origin recognition complex
           second largest subunit 2 | chr2:15759568-15761116
           FORWARD LENGTH=363
          Length = 363

 Score =  489 bits (1260), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 232/350 (66%), Positives = 291/350 (83%), Gaps = 2/350 (0%)

Query: 20  FSRNYFLAKELASSVKKSKQKITDINVVDEQELREAALHIQPKHENEIALLMDSYKAMYP 79
           FSRNYFLAKEL  + K+S  K++DI++VDEQELRE A  I+ KH  EI+ LM  YK MY 
Sbjct: 14  FSRNYFLAKELGGASKRSAHKLSDIHIVDEQELRETASTIEMKHSKEISELMSDYKTMYS 73

Query: 80  EWLFALKCGFGLLMYGFGSKKAMIEDFASRALAEYSVVVINGYLQTINLKQVVVALADLL 139
           +W+F L+CGFGLLMYGFGSKKA++EDFAS +L +YSVVVINGYL ++NLKQV++ALA+LL
Sbjct: 74  KWVFELRCGFGLLMYGFGSKKALVEDFASASLTDYSVVVINGYLPSVNLKQVLLALAELL 133

Query: 140 CDYMKTKRRVSTRDLPKSQQPYNSQSMDDLLTFLDEVELEDGDCFVCVVIHNIDGPGLRD 199
            + +K KR+ S+  L K Q+ + S+SMDD+L+FL   +  D DCF+CVV+HNIDGP LRD
Sbjct: 134 SELLKCKRK-SSGSLSKGQETFPSRSMDDILSFLHGPQSGDKDCFICVVVHNIDGPALRD 192

Query: 200 YETQQYLARLAACTHIRIVASIDHVNAPLYWDKNMAHTQFNWSWYHVPTFSPYKVEGMFY 259
            E+QQ LARL++C+HIR+VASIDHVNAPL WDK M H QFNW W+HVPTF+PY VEG+F+
Sbjct: 193 PESQQTLARLSSCSHIRLVASIDHVNAPLLWDKKMVHKQFNWLWHHVPTFAPYNVEGVFF 252

Query: 260 PMILAHGSASQTVKTATIVLQSLTPNAQSVFKVLAEHQLSHP-EEGMPISDLYSVCRERF 318
           P++LA GS +QT KTA IVLQSLTPN Q+VFK+LAE+QLSHP E+GMP  DLYS  RERF
Sbjct: 253 PLVLAQGSTAQTAKTAAIVLQSLTPNGQNVFKILAEYQLSHPDEDGMPTDDLYSASRERF 312

Query: 319 LVSSQVTLNSHLTEFKDHELVKIKRHTDGQDCLYIPLAAEALQKVLLEIN 368
            VSSQVTLNSHLTEFKDHELVK KR++DGQ+CL IPL ++A++++LL++N
Sbjct: 313 FVSSQVTLNSHLTEFKDHELVKTKRNSDGQECLNIPLTSDAIRQLLLDLN 362


>AT2G37560.2 | Symbols: ORC2, ATORC2 | origin recognition complex
           second largest subunit 2 | chr2:15759568-15761116
           FORWARD LENGTH=345
          Length = 345

 Score =  479 bits (1233), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 223/350 (63%), Positives = 276/350 (78%), Gaps = 20/350 (5%)

Query: 20  FSRNYFLAKELASSVKKSKQKITDINVVDEQELREAALHIQPKHENEIALLMDSYKAMYP 79
           FSRNYFLAKEL  + K+S  K++DI++VDEQELRE A  I+ KH  EI+ LM  YK MY 
Sbjct: 14  FSRNYFLAKELGGASKRSAHKLSDIHIVDEQELRETASTIEMKHSKEISELMSDYKTMYS 73

Query: 80  EWLFALKCGFGLLMYGFGSKKAMIEDFASRALAEYSVVVINGYLQTINLKQVVVALADLL 139
           +W+F L+CGFGLLMYGFGSKKA++EDFAS +L +YSVVVINGYL ++NLKQ         
Sbjct: 74  KWVFELRCGFGLLMYGFGSKKALVEDFASASLTDYSVVVINGYLPSVNLKQ--------- 124

Query: 140 CDYMKTKRRVSTRDLPKSQQPYNSQSMDDLLTFLDEVELEDGDCFVCVVIHNIDGPGLRD 199
                     S+  L K Q+ + S+SMDD+L+FL   +  D DCF+CVV+HNIDGP LRD
Sbjct: 125 ----------SSGSLSKGQETFPSRSMDDILSFLHGPQSGDKDCFICVVVHNIDGPALRD 174

Query: 200 YETQQYLARLAACTHIRIVASIDHVNAPLYWDKNMAHTQFNWSWYHVPTFSPYKVEGMFY 259
            E+QQ LARL++C+HIR+VASIDHVNAPL WDK M H QFNW W+HVPTF+PY VEG+F+
Sbjct: 175 PESQQTLARLSSCSHIRLVASIDHVNAPLLWDKKMVHKQFNWLWHHVPTFAPYNVEGVFF 234

Query: 260 PMILAHGSASQTVKTATIVLQSLTPNAQSVFKVLAEHQLSHP-EEGMPISDLYSVCRERF 318
           P++LA GS +QT KTA IVLQSLTPN Q+VFK+LAE+QLSHP E+GMP  DLYS  RERF
Sbjct: 235 PLVLAQGSTAQTAKTAAIVLQSLTPNGQNVFKILAEYQLSHPDEDGMPTDDLYSASRERF 294

Query: 319 LVSSQVTLNSHLTEFKDHELVKIKRHTDGQDCLYIPLAAEALQKVLLEIN 368
            VSSQVTLNSHLTEFKDHELVK KR++DGQ+CL IPL ++A++++LL++N
Sbjct: 295 FVSSQVTLNSHLTEFKDHELVKTKRNSDGQECLNIPLTSDAIRQLLLDLN 344