Miyakogusa Predicted Gene

Lj0g3v0150309.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0150309.2 tr|Q9LPE7|Q9LPE7_ARATH T12C22.11 protein
OS=Arabidopsis thaliana GN=T12C22.11 PE=4
SV=1,39.5,0.0000000005,YbaK,YbaK/aminoacyl-tRNA synthetase-associated
domain; FAMILY NOT NAMED,NULL; seg,NULL; no descripti,CUFF.9225.2
         (293 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G44835.1 | Symbols:  | YbaK/aminoacyl-tRNA synthetase-associa...   314   4e-86
AT1G44835.2 | Symbols:  | YbaK/aminoacyl-tRNA synthetase-associa...   312   2e-85

>AT1G44835.1 | Symbols:  | YbaK/aminoacyl-tRNA synthetase-associated
           domain | chr1:16939909-16942337 FORWARD LENGTH=307
          Length = 307

 Score =  314 bits (805), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 165/282 (58%), Positives = 197/282 (69%), Gaps = 13/282 (4%)

Query: 1   MGLSKXXXXXXXXXXXIEFSKYEHPLVLTVEAQAKYVGNLGGGLSKNLFLKDKKSRFYVV 60
           MG +K           I++SKYEHP VLTVE QAKYV +  G LSKNLFLKDKK R+Y+V
Sbjct: 1   MGFTKDQLLDRLQELEIDYSKYEHPPVLTVEEQAKYVSSSKGALSKNLFLKDKKHRYYIV 60

Query: 61  SALADTRVDLKVLSQRLGLGKGGLRMAPEEALGEILQVPLGCVTPFALVNESARDVSLLL 120
           SA+ DT+VD+KVLSQRLGLGKGG+RMAPEEALGE+LQV LGCVTPFA+VNESARDVSLLL
Sbjct: 61  SAMVDTKVDMKVLSQRLGLGKGGIRMAPEEALGELLQVSLGCVTPFAVVNESARDVSLLL 120

Query: 121 DQGFKTHEHCFFHPLSNDMSISLNARDLDRFLKSIGRDPSYVDLEATPTVGKDQPPDLAA 180
           DQ FK    C FHPLSND+S+SLN   LD+FLKSIGRDP YVDLEA P VGKDQ PDLA 
Sbjct: 121 DQKFKNQTRCIFHPLSNDVSVSLNTLGLDKFLKSIGRDPVYVDLEANPVVGKDQAPDLAV 180

Query: 181 LVPSGSIALPDQAEKQSSSEVPKEGNTVSVSNKPKTVSAKVVNPCIVGNNTKGTPVKNVC 240
            VPS S+ +P+   + SS+++P           PK+VSA+V        +     VK+V 
Sbjct: 181 CVPSNSVIVPEIPNQTSSTQIP----------LPKSVSAEVKPVASAKTSKPACKVKSVA 230

Query: 241 SS---GSFADVGKFVEEILQKTSELLLSEIKEETIGLHGEQL 279
            +    ++ +  KFV+EIL KTS LLLSE K E +    E L
Sbjct: 231 ENSAPSAYKNPEKFVQEILDKTSALLLSEAKGECVEALAETL 272


>AT1G44835.2 | Symbols:  | YbaK/aminoacyl-tRNA synthetase-associated
           domain | chr1:16939909-16942337 FORWARD LENGTH=308
          Length = 308

 Score =  312 bits (799), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 168/296 (56%), Positives = 205/296 (69%), Gaps = 20/296 (6%)

Query: 1   MGLSKXXXXXXXXXXXIEFSKYEHPLVLTVEAQAKYVGNLGGGLSKNLFLKDKKSRFYVV 60
           MG +K           I++SKYEHP VLTVE QAKYV +  G LSKNLFLKDKK R+Y+V
Sbjct: 1   MGFTKDQLLDRLQELEIDYSKYEHPPVLTVEEQAKYVSSSKGALSKNLFLKDKKHRYYIV 60

Query: 61  SALADTRVDLKVLSQRLGLGKGGLRMAPEEALGEILQVPLGCVTPFALVNESARDVSLLL 120
           SA+ DT+VD+KVLSQRLGLGKGG+RMAPEEALGE+LQV LGCVTPFA+VNESARDVSLLL
Sbjct: 61  SAMVDTKVDMKVLSQRLGLGKGGIRMAPEEALGELLQVSLGCVTPFAVVNESARDVSLLL 120

Query: 121 DQGFKTHEHCFFHPLSNDMSISLNARDLDRFLKSIGRDPSYVDLEATPTVGKDQPPDLAA 180
           DQ FK    C FHPLSND+S+SLN   LD+FLKSIGRDP YVDLEA P VGKDQ PDLA 
Sbjct: 121 DQKFKNQTRCIFHPLSNDVSVSLNTLGLDKFLKSIGRDPVYVDLEANPVVGKDQAPDLAV 180

Query: 181 LVPSGSIALPDQAEKQSSSEVPKEGNTVSVSNKPKTVSAKVVNPCIVGNNTKGTPVKNVC 240
            VPS S+ +P+   + SS+++P           PK+VSA+V        +     VK+V 
Sbjct: 181 CVPSNSVIVPEIPNQTSSTQIP----------LPKSVSAEVKPVASAKTSKPACKVKSVA 230

Query: 241 SS---GSFADVGKFVEEILQKTSELLLSEIKEETIGLHGEQLSAVVCDKLQKNLNS 293
            +    ++ +  KFV+EIL KTS LLLSE+ +      GE + A + + L+K L S
Sbjct: 231 ENSAPSAYKNPEKFVQEILDKTSALLLSEVAK------GECVEA-LAETLRKRLTS 279