Miyakogusa Predicted Gene

Lj0g3v0150309.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0150309.1 Non Chatacterized Hit- tr|I1KA77|I1KA77_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.30198
PE,84.71,0,YbaK,YbaK/aminoacyl-tRNA synthetase-associated domain;
FAMILY NOT NAMED,NULL; seg,NULL; no descripti,CUFF.9225.1
         (173 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G44835.2 | Symbols:  | YbaK/aminoacyl-tRNA synthetase-associa...   250   3e-67
AT1G44835.1 | Symbols:  | YbaK/aminoacyl-tRNA synthetase-associa...   250   3e-67

>AT1G44835.2 | Symbols:  | YbaK/aminoacyl-tRNA synthetase-associated
           domain | chr1:16939909-16942337 FORWARD LENGTH=308
          Length = 308

 Score =  250 bits (639), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 120/167 (71%), Positives = 136/167 (81%)

Query: 1   MGLSKXXXXXXXXXXXIEFSKYEHPLVLTVEAQAKYVGNLGGGLSKNLFLKDKKSRFYVV 60
           MG +K           I++SKYEHP VLTVE QAKYV +  G LSKNLFLKDKK R+Y+V
Sbjct: 1   MGFTKDQLLDRLQELEIDYSKYEHPPVLTVEEQAKYVSSSKGALSKNLFLKDKKHRYYIV 60

Query: 61  SALADTRVDLKVLSQRLGLGKGGLRMAPEEALGEILQVPLGCVTPFALVNESARDVSLLL 120
           SA+ DT+VD+KVLSQRLGLGKGG+RMAPEEALGE+LQV LGCVTPFA+VNESARDVSLLL
Sbjct: 61  SAMVDTKVDMKVLSQRLGLGKGGIRMAPEEALGELLQVSLGCVTPFAVVNESARDVSLLL 120

Query: 121 DQGFKTHEHCFFHPLSNDMSISLNARDLDRFLKSIGRDPSYVDLEAS 167
           DQ FK    C FHPLSND+S+SLN   LD+FLKSIGRDP YVDLEA+
Sbjct: 121 DQKFKNQTRCIFHPLSNDVSVSLNTLGLDKFLKSIGRDPVYVDLEAN 167


>AT1G44835.1 | Symbols:  | YbaK/aminoacyl-tRNA synthetase-associated
           domain | chr1:16939909-16942337 FORWARD LENGTH=307
          Length = 307

 Score =  250 bits (639), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 120/167 (71%), Positives = 136/167 (81%)

Query: 1   MGLSKXXXXXXXXXXXIEFSKYEHPLVLTVEAQAKYVGNLGGGLSKNLFLKDKKSRFYVV 60
           MG +K           I++SKYEHP VLTVE QAKYV +  G LSKNLFLKDKK R+Y+V
Sbjct: 1   MGFTKDQLLDRLQELEIDYSKYEHPPVLTVEEQAKYVSSSKGALSKNLFLKDKKHRYYIV 60

Query: 61  SALADTRVDLKVLSQRLGLGKGGLRMAPEEALGEILQVPLGCVTPFALVNESARDVSLLL 120
           SA+ DT+VD+KVLSQRLGLGKGG+RMAPEEALGE+LQV LGCVTPFA+VNESARDVSLLL
Sbjct: 61  SAMVDTKVDMKVLSQRLGLGKGGIRMAPEEALGELLQVSLGCVTPFAVVNESARDVSLLL 120

Query: 121 DQGFKTHEHCFFHPLSNDMSISLNARDLDRFLKSIGRDPSYVDLEAS 167
           DQ FK    C FHPLSND+S+SLN   LD+FLKSIGRDP YVDLEA+
Sbjct: 121 DQKFKNQTRCIFHPLSNDVSVSLNTLGLDKFLKSIGRDPVYVDLEAN 167